PMCID string | Sentences string | ner list |
|---|---|---|
PMC5839394 | After 24 h of incubation 20 µL of the Cell titer 96AQueous reagent was added to each well after three washes with phosphate buffer saline (PBS) and incubated for 1-4 h at 37 °C in a CO2 incubator. | [
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PMC11730000 | In addition, this study evaluated the expression of the mammalian target of rapamycin (mTOR) protein in the Chinese hamster ovary cell line (CHO-K1). | [
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PMC9429973 | Research ethics approval was obtained. | [
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PMC9429973 | Treatment with L-gln resulted in clinically significant outcomes combined with significant improvement of the hemolysis parameters from baseline through 72 weeks suggesting sustained long-term efficacy. | [
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PMC11519583 | In total, 1978 mice were used for this study (including mice used to generate transgenic and gene-edited mice, to explore optimal conditions for experiments, and to learn experimental techniques). | [
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PMC8193046 | Fig. 1 provides the molecular formulae of the most prominent drug-like pan-ABC transporter inhibitors known until today. | [
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PMC8777939 | AGR2 could serve as a biomarker for the prognosis of metastasis and chemotherapeutic response in breast cancer , lung cancer , gastric cancer , esophageal squamous cell carcinoma . | [
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PMC11757131 | Valine is considered the second or third most limiting amino acid with the highest absolute absorption in the mammary gland tissue of sows during lactation (5). | [
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PMC11754291 | Cells were lysed by adding the lysis buffer, followed by incubation on ice for 10 min. | [
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PMC10976516 | In situ, intratumoral, OV therapy consists of adenovirus-mediated expression of herpes simplex virus thymidine kinase (ADV/HSVtk) plus valacyclovir therapy. | [
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PMC11738017 | Medscape, LLC designates this Journal-based CME activity for a maximum of 1.0 AMA PRA Category 1 Credit(s)™. | [
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PMC11789597 | All studies that involved human samples were approved by the Ethical Committee for Clinical Medicine Research of The Third Affiliated Hospital of Sun Yat‐Sen University (02‐379) and the Medical Ethic Committee of Guangzhou Medical University. | [
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PMC11471176 | The evaluation of ACE2 inhibition was performed across a concentration range of 12.5–100 mg/ml (equivalent to ∼ 55.2–442 mM). | [
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PMC11467964 | At the same time, functional enrichment analyses were carried out based on above BM cluster‐related DEGs. | [
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PMC9429973 | After a median follow-up of 28 months, median PFS was 10.4 months, median OS was not reached (OS after 24 months until 39 months plateau 0.504). | [
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PMC9429973 | No patient suffered primary graft failure. | [
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PMC11476106 | Specifically, cell line A673 (Figure 5, top graphs) showed no remarkable differences in any size category with respect to VN cross-linking in the scaffolds. | [
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PMC11755519 | Based on the analysis of the EVs obtained, it was confirmed that the isolation was successful and that the exosomes constitute a population. | [
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PMC6364197 | In recent years, the research and development of targeted drugs has become a hot spot (28,29). | [
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PMC11637716 | Abdominal ultrasound did not show specific changes apart from splenomegaly. | [
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PMC11337594 | A transcriptome sequencing and metabolomic analysis of TER-treated A375 cells was conducted to identify potential pathways of action. | [
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PMC11798926 | We used IFITM3 as a positive control for interaction with μ2 and surveyed multiple μAP subunits, including μ1a, μ2, μ3a and μ4. | [
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PMC11240571 | Background: Exosomal PD-L1 has garnered attention owing to its role in instigating systemic immune suppression. | [
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PMC11321678 | Third, the number of Tn5 insertions in the tile was summed. | [
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PMC11802929 | We identify several viral antigen-specific T cell populations observed in previous work by ourselves and others demonstrating the feasibility of this framework on a whole viral proteome scale. | [
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PMC10006224 | Images were analyzed with a custom made software programed in Definiens Developer XD v2.5 software (Definiens). | [
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PMC11787355 | d–f were analyzed with two-way ANOVA multiple comparison corrected with Holm–Šidák method. | [
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PMC11798926 | Representative images and quantification of colocalization of SynDIG1 mutants with Golgin-97 and EEA1. ( | [
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PMC9429973 | B. Chin-Yee, P. Bhai, I. Cheong, M. Matyashin, C. Hsia, E. Kawata, J. Ho, M. Levy, A. Stuart, H. Lin, I. Chin-Yee, M. Kadour, B. Sadikovic, A. Lazo-Langner Hematology; Pathology and Laboratory Medicine, Western University, London, Canada; Hematology and Oncology, Kyoto Prefectural University of Medicine, Kyoto, Japan B... | [
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PMC11407042 | Besides, accurate calculation of both numbers of the A549 cells and P. aeruginosa cells prior to their co-culture are essential to establish an accurate MOI. | [
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PMC11535726 | N/A: data not available; A: data available. | [
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PMC11129910 | Studies have reported that the dysregulation of RAB25 gene expression could be associated with the aggressiveness of various human cancers, including breast and ovarian cancers , prostate cancer , bladder carcinoma , lung cancer , bladder cancer , gastric carcinoma , head and neck cancer , and esophageal carcinoma . | [
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PMC11201245 | They do not show any TP53 mutations and are characterized by their genetically relatively stable and indolent character . | [
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PMC9583612 | It is hence paramount to effectively estimate the duration and frequency of such intermittent emissions, which requires the use of a high sampling frequency measurement system. | [
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PMC11321678 | QuantStudio 6 Real‐Time PCR system (Applied Biosystems, Foster City, CA, USA) and SYBR Green qPCR Master Mix (Vazyme Biotech, Nanjing, China) were used to perform qPCR. | [
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PMC11632064 | Maximal respiration was determined after FCCP injection. | [
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PMC9429973 | Baseline characteristics, a history of cancer, time between breast cancer (due to possible breast reconstruction with an implant following cancer surgery) and BIA-ALCL, treatment modality, best response to treatment and survival outcomes were collected. | [
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PMC8873393 | The known noncoding RNAs expressed in at least one fraction were identified by blasting the transcripts against the NONCODE v6.0 database using the following selection criteria: identity >0.9, coverage >0.8, and E value < 10. | [
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PMC11409031 | Recovery of P21 was also accompanied by recovery of apoptotic maker, BAX. | [
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PMC11653533 | Anika Zaman: Visualization, Methodology, Formal analysis, Data curation, Conceptualization. | [
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PMC9429973 | Average adverse outcome rates based on study-level HbF averages were investigated in 735 analyses. | [
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PMC11683240 | α1AT, α1-antitrypsin; PT, pertussis toxin. | [
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PMC11361748 | Rescue assays involving expression of EGFP-WTK17 and EGFP-WTK14 fusion proteins in KRT17 KO A431 cells. | [
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PMC11770199 | Activation marker MHC-II expression in macrophages. | [
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PMC11045125 | The EBV Akata-BX1 Burkitt lymphoma cell line was a gift from Lindsay Hutt-Fletcher and was obtained by super-infecting an EBV-negative clone of Akata Burkitt lymphoma cells with recombinant Akata EBV containing a G418 resistance gene cassette and GFP gene inserted into the EBV BXLF1 gene as previously described) . | [
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PMC11013014 | Molecular docking simulations were performed using Autodock Vina software (ADT) MGLTools 1.5.6 packages, and the resulting data were analysed using Discovery Studio 2016 Client software. | [
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"O",
"O",
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"O",
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"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
... |
PMC9429973 | All 22 pts experienced ≥1 TEAE; 12 (54.5%) pts experienced ≥1 TESAE. | [
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"O",
"O",
"O",
"O",
"O",
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"tokens": [
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... |
PMC11607764 | The GEPIA2 database, which includes TCGA and GTEx data, was used to assess the top 100 genes highly correlated with PTBP1 expression. | [
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"O",
"O",
"O",
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"tokens": [
... |
PMC10840195 | Finally, flow cytometry analysis was performed to calculate the apoptosis rates of cells in each group. | [
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"O",
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"O",
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... |
PMC9429973 | All patients were recommended to receive 6 cycles of ZR-CHOP (R-CHOP or R-CHOP were allowed in cycle 1 due to poor physical condition or inaccessible molecular characteristics at treatment) and patients older than 70 years old were administered ZR-miniCHOP. | [
{
"tags": [
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"O",
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... |
PMC10490530 | We combined FLuc2, NLuc, and hLuz in this new assay format to unravel any unknown regulatory insights by simultaneously monitoring the complex gene regulation in epithelial ovarian cancer (EOC). | [
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"O",
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... |
PMC11569208 | All statistical analyses and visualization of data was performed using Prism 9 (GraphPad, San Diego, CA) software. | [
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"O",
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... |
PMC9429973 | Because diversity of LSR junctions in LSR-High CLLs is evocative of an on-going process, we analyzed the expression of productive and non-productive transcripts of the constant part of IgH locus, which we found increased in LSR-High when compared to LSR-Low CLLs. | [
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... |
PMC11317131 | Host cells contain a mutation plasmid (MP), described below, and gIII expression plasmids called the accessory plasmid (AP) and complementary plasmid (CP) to enable selection for integrases with improved activity. | [
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"O",
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"O",
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"O",
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... |
PMC10858941 | Images were obtained using an inverted Olympus IX70 microscope equipped with epifluorescence optics and camera (Olympus OM-4 Ti) and, in the case of microdevices, Nikon Eclipse Ti-E coupled to a C1 modular confocal microscope. | [
{
"tags": [
"O",
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"O",
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"O",
"O",
"O",
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... |
PMC9429973 | However, prolonged parenteral PI therapy (e.g. with V) can be challenging to achieve in routine clinical practice, and outcomes for pts are often poorer in this setting compared with clinical trials. | [
{
"tags": [
"O",
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"O",
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"O",
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"O",
"O",
"O",
"O",
"O",
"O",
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... |
PMC11575040 | Functional analysis revealed that silencing-LINC00094 inhibited the proliferation, colony formation, invasion, and migration of melanoma cells. | [
{
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"O",
"O",
"O",
"O",
"O",
"O",
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"tokens": [
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... |
PMC11462673 | Unfortunately, the outcomes for relapsed T-ALL remain poor, with a 5-year OS of 35% . | [
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"O",
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"tokens": [
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",",
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"outcomes",
"for",
... |
PMC11768927 | For example, Jenks et al. demonstrated that VSV expressing human IFN-β (VSV-hIFNβ) showed no neurotoxicity in rodent and non-human primate models of hepatocellular carcinoma. | [
{
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"O",
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"O",
"O",
"O",
"O",
"O",
"O",
"O",
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... |
PMC11754784 | To experimentally investigate the computing performance of DNP2, we labeled a Cy5 on sgc4f, a TAMRA on sgc8c and a FAM on Nb-S and labeled corresponding quenchers on complementary strands. | [
{
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... |
PMC10877303 | Fig. 7 (b) indicates that the CID-14335962 (3-beta-O-(trans-p-Coumaroyl) maslinic acid)-3CL complex had extensions in the surface upon the binding of the ligand molecules, whereas the other two complexes had a stable SASA profile. | [
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... |
PMC9429973 | Treatment-emergent SAEs of interest occurred in 4 (18%) patients, specifically: catheter site hemorrhage, gastrointestinal hemorrhage, coagulopathy, and hypotension, each occurring in 1 patient. | [
{
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... |
PMC11489351 | This type of analysis shows enrichments of TFs with the highest z-score in each of our different experimental conditions. | [
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... |
PMC7602170 | It is well established that the rate-limiting step is the initiation phase regulated by eukaryotic translation initiation factors (eIFs) . | [
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PMC9918897 | Since they were identical species, no inclusion or exclusion criteria were set up. | [
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"O",
"O",
"O",
"O",
"O",
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",",
"no",
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PMC11706491 | In fission yeast, early studies of cell cycle progression relied on observations of cell size. | [
{
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"O",
"O",
"O",
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"early",
"studies",
... |
PMC3888431 | The venn diagram (b) shows the gene clusters created with the wcd tool. | [
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"O",
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PMC9895440 | Likewise, the low abundance and unknown antigen specificity in TILs freshly obtained from patients hinder more comprehensive mechanistic studies. | [
{
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"O",
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"tokens": [
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",",
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... |
PMC11720808 | TRAF6 is an effector of TLR4, and Lin et al previously reported that lipopolysaccharide (LPS) can affect the interaction of TLR4 and TRAF6.28 Considering that SCU binds to TLR4 directly, we hypothesized that SCU may intervene in the interaction between TLR4 and TRAF6, resulting in the inactivation of the NF-κB signalin... | [
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... |
PMC11599565 | II: Expression of MGMT (Methylated-DNA–protein-cysteine methyltransferase) DNA repair enzyme in OC236, sorted by EpCAM expression. | [
{
"tags": [
"O",
"O",
"O",
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"tokens": [
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... |
PMC6267596 | RNA Samples were assessed for quality with an Advanced Analytics Fragment Analyzer (High Sensitivity RNA Analysis Kit – Catalog # DNF-491 / User Guide DNF-491-2014AUG13) and quantity with a Qubit RNA quantification kit (Qubit® RNA HS Assay KitAssay Kit – Catalog # Q32852). | [
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"O",
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... |
PMC11769516 | They also indicate a reduction in the number of genes for neurotrophic factors such as TH, BDNF and AADC, which makes DON-induced cell death associated with the impaired regulation of neurotransmitter release and reduced neuronal function . | [
{
"tags": [
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... |
PMC9027909 | From these subtypes, subtype (ST) 3 thought to be the most prevalent subtypes with wide distribution all over the world . | [
{
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"O",
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"tokens": [
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... |
PMC11699465 | IFNGR1 acts as a key factor in regulating demethylase JMJD2D-induced PD-L1 expression in colorectal cancer. | [
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"O",
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PMC11697065 | We therefore characterized the clonal lines with respect to transgene copy number, mRNA transcript abundance, and protein expression. | [
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"tokens": [
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PMC9429973 | Siltuximab—a monoclonal antibody against interleukin-6—is the only FDA- and EMA-approved treatment for iMCD. | [
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"O",
"O",
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"tokens": [
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"—",
"a",
"monoclonal",
"antibody",
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... |
PMC8753818 | :> 0.05, **:> 0.01, ***:> 0.001, ****:> 0.0001) Growth dynamics and cell viability: a Comparison of cell viability between CHO-K1 and CHO-KO cells during 24, 48 and 96 h. b Comparison of cell counting between CHO-K1and CHO-KO cells during 24, 48, 72 and 96 h. Results represent the average of three analyses (n = 5), and... | [
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"O",
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"O",
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"O",
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"O",
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... |
PMC11470381 | The choice of method depends on various parameters, including image quality, signal strength, and background noise level. | [
{
"tags": [
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"O",
"O",
"O",
"O",
"O",
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... |
PMC9429973 | Results: A total of 26 pts were enrolled and treated; median (range) age was 65.0 (44–80) years, 25 (96.2%) had ECOG PS ≤1, 11 (42.3%) had ≥2 prior systemic therapies, and 6 (23.1%) had received prior bendamustine. | [
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"O",
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"O",
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"O",
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... |
PMC11753435 | The dissociation constant (KD) for the purified uAbs to β-catenin was measured by BLI assays using an Octet RH16 instrument (Sartorius) at 30°C. | [
{
"tags": [
"O",
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... |
PMC10033453 | ∗p < 0.05, ∗∗∗∗p < 0.0001. ( | [
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PMC10734950 | Densitometry was obtained using the Thermo Fisher iBright Densitometry analysis software. | [
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"O",
"O",
"O",
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PMC11791432 | 1 × 10 cells per well were seeded in 96-well plates then cultured for 48 h in an incubator. | [
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"tokens": [
"1",
"×",
"10",
"cells",
"pe... |
PMC11704135 | The plates were examined to observe any color changes. | [
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"tags": [
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PMC6803987 | As shown in Figure 2, after the sample was applied to the cells, the sample was able to improve cell growth and improve survival rate compared with the negative control group (* p < 0.05). | [
{
"tags": [
"O",
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"O",
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... |
PMC11653168 | Total STAT3 expression remained constant, similar to in CCRF-CEM cells (Fig. 2B). | [
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"... |
PMC11470381 | Live-cell imaging without CO2 supplementation and adequate humidification should be limited to shorter durations of no more than 30–40 min. | [
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PMC10213179 | Various solid tumors, such as ovary, prostate, pancreas, glioblastoma, lung, melanoma, esophageal, colorectal, bone sarcomas, and breast, are reported to express high levels of the tyrosine kinase receptor EphA2. | [
{
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... |
PMC6160470 | A2780 and A2780/Adr cells were cultured for 72 h without treatment (CTRL) or treated with verapamil (10 μM,) or DAC-2Amide and DAC-3Amide (2 μM). | [
{
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"O",
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"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"... |
PMC6600592 | Preparation of Cyclohexyl 4-(4-substituted phenyl) -4-oxobutanoates (3) Compound 2 (2A, 2B, 2C, 2D, 15 mmol) reacted with cyclohexanol (30 mmol) in CH2Cl2 (20 mL) with p-methylbenzenesulfonic acid (TsOH) (2g, 11.6 mmol) under refluxing for 4 h (Scheme 1). | [
{
"tags": [
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
... |
PMC11412721 | Gene set enrichment analysis (GSEA). | [
{
"tags": [
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O"
],
"tokens": [
"Gene",
"set",
"enrichment",
"analysis",
"(",
"GSEA",
")",
"."
]
}
] |
PMC11607321 | 1Cancer multi-omics integration with MOSA.a Cancer cell line multi-omic datasets across the 1523 cancer cell lines. | [
{
"tags": [
"O",
"O",
"O",
"O",
"O",
"B-CellLine",
"I-CellLine",
"I-CellLine",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O"
],
"tokens": [
"1Cancer",
"multi-omics",
"integration",
... |
PMC11127909 | Then, the images were photographed by the Leica DMi8 and analyzed by ImageJ (version 1.8.0). | [
{
"tags": [
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O"
],
"tokens": [
"Then",
",",
"the",
"images",
"were",
... |
PMC10728200 | The detection indexes of ferroptosis include the changes in mitochondrial morphology and levels of lipid ROS, Fe, and GSH . | [
{
"tags": [
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O"
],
"tokens": [
"The",
"detection",
... |
PMC11766332 | Recently, miRNAs have gained prominence as important regulators of glycome . | [
{
"tags": [
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O"
],
"tokens": [
"Recently",
",",
"miRNAs",
"have",
"gained",
"prominence",
"as",
"important",
"regulators",
... |
PMC11412721 | Right, below: the Trp53 allele only enables the synthesis of proteins with the ‘canonical’ α C-terminus. ( | [
{
"tags": [
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O"
],
"tokens": [
"Right",
",",
"bel... |
PMC9895440 | Briefly, transcript count data was analyzed in R 4.2.1 using edgeR_3.38.4, limma_3.52.2, org. | [
{
"tags": [
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O"
],
"tokens": [
"Briefly",
",",
"transcript",
"count",
"data",
"was",
... |
PMC9429973 | Most pts received conditioning with melphalan 200mg/m for both transplants (1: 100%, 2: 96.2%). | [
{
"tags": [
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O"
],
"tokens": [
"Most",
"pts",
"re... |
PMC6650823 | Upon formation of a ternary complex POI–PROTAC–E3 ligase, the POI is ubiquitinated and degraded by the proteasome. | [
{
"tags": [
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O"
],
"tokens": [
"Upon",
"form... |
PMC11621493 | Selected gene set enrichment plots for “cytokine activity,” “chemokine activity” (GO mf), and “lipid catabolic process” (GO bp) are shown in Figure 9B–D. Here, multiple cytokines and chemokines (Ccl2, Ccl9, Cxcl1, Cxcl12, Cxcl2, Il1a, Il23a, Lif, Tnf) were significantly upregulated, indicating increased inflammation in... | [
{
"tags": [
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
... |
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