PMCID string | Sentences string | ner list |
|---|---|---|
PMC9693627 | An isolation intensity threshold of 50,000 counts was determined for precursor’s selection and up to top 20 precursors were chosen for fragmentation with high-energy collisional dissociation (HCD) at 29 NCE. | [
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PMC10507284 | Moreover, the GSE21050 (including 309 STS patients), GSE30929 (including 140 STS patients), and GSE71118 (including 312 STS patients) were applied to validate the association of TROAP with the prognosis of STS. | [
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PMC9429973 | Another exciting therapeutic approach targets the TGF-β pathway. | [
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PMC7192625 | In the case of mESCs, these are the features that were considered in a previous work (25) and include histone modifications, binding peaks of different transcription factors and cytosine modifications (see Table 1). | [
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PMC9429973 | The 1/1, 1/2, 1/3, 1/4, 2/2, 2/3 and 2/4 genotypes of the IL-1RN VNTR polymorphism were statistically compared before treatment between patients having undergone ASCT and healthy controls, as were the 1/1, 1/2 and 2/2 genotypes of IL-4 VNTR polymorphism. | [
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PMC6450504 | One-way ANOVA with Tukey’s multiple comparisons test. ( | [
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PMC9516401 | To the best of our knowledge, although studies have emphasized the anti-oxidant and hypolipidemic effects of HEPV on diabetic mice (Pari and Venkateswaran, 2003 ▶), no study has addressed the potential of HEPV in reducing IDE expression; thus, the current study presents for the first time that the anti-diabetic effect ... | [
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PMC10222971 | Leishmanicidal activity was strongly dependent on the nature and position of these substituents. | [
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PMC11798926 | Although we did not detect an interaction between μ2 and SynDIG2, we included several deletion mutants in our surface expression studies for comparison. | [
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PMC11583010 | We evaluated the spatio–temporal distribution of ETx-22 in tumors after a single-dose injection (10 mg/kg i.v.) | [
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PMC11727145 | The ability of HaCaT cells to form a multilayered epithelium when cultured at the air-liquid interface makes them useful for human skin research and provides a basis for a standardized skin model. | [
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PMC11621493 | The cell suspension was passed through a 100 μm filter, centrifuged for 5 min at 180 g, and the cell pellet was resuspended in 1 ml EpiLife growth medium containing above mentioned supplements. | [
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PMC11407042 | Here, we present a protocol for detecting the T3SS-mediated cytotoxicity of P. aeruginosa using the A549 cell line. | [
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PMC9429973 | The group that received frontline BTKi followed by CIT/PI based Rx as second line (n=7) was compared to that receiving frontline CIT/PI based Rx followed by BTKi (n=21). | [
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PMC11758416 | Follow manufacturer’s protocol for T cell isolation kit or FACS sorting protocol.b. | [
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PMC11696659 | Luis Paz-Ares reports was provided by Fundación CRIS contra el cancer. | [
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PMC11632064 | To confirm this hypothesis, we examined the induction of CXCL8 in MeWo and A-375 cells treated for 72 h with inhibitors targeting PLK1/3, CDK2, FAK, ULK1/2, AURORA/B, CDK16, MET, and JAK3, which are kinases known to bind BI-D1870 (Aronchik et al, 2014). | [
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PMC11672881 | This aligns with the previous finding of higher ROS levels. | [
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PMC11696576 | Created in BioRender. | [
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PMC11283030 | c. ACLY knockdown inhibited the proliferative activity of 786-O and A498 cells (CCK-8). | [
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PMC11555465 | no. ab2307391; 1:10,000; Jackson; Horseradish Peroxidase) at 37°C for 1 h. Finally, the membrane was visualized using an ECL Luminescence Assay Kit (Shanghai Biyuntian Biotechnology Co., Ltd.). | [
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PMC9813422 | Although well-known EMPs are usually encoded by viruses, cellular proteins involved in organizing the chromosome architecture of host cells also play a role in viral episome maintenance. | [
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PMC9878562 | Representative plots of three different flow cytometry analyses. ( | [
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PMC11615218 | c The metabolic phenotypes and memory status of T cells are interconnected. | [
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PMC11347429 | Functional pathway analysis using GO term enrichment for the down-regulated DEGs from the contrast of infected ICU patients versus healthy controls. | [
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PMC9398137 | Adult female NSG mice were used for all experiments. | [
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PMC11711127 | Thus, Truckenbrod et al. (172) emphasised that tolerance was not binary, an important parameter which sits centre to our proposal for the use of ‘resistance.’ | [
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PMC11583690 | Unloaded BPMO and MSN samples were also tested for comparison. | [
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PMC5311252 | Expression of AAGUGC-miRNAs and targets were then evaluated in a number of different cancer types using public domain data. | [
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PMC10975211 | The discovery and development of targeted therapies, nanotechnology-based approaches, and natural peptides like AMPs provide hope for advancing cancer treatment and antimicrobial strategies. | [
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PMC9847912 | In both CEMss cells and MAGIC-5A indicator cells, viability (as measured using the CellTiter Glo assay) was >90% of the no-drug controls at GSK232 concentrations as high as 100 nM, whereas partial inhibition of CEMss and MAGIC-5A cell growth was observed at 400 nM GSK232 (S1 Fig). | [
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PMC10470467 | In addition, as shown in Figures 7C,D, we discovered that the mRNA expression of all 3 genes was negatively correlated with methylation expression and positively correlated with the percentage of copy number variation (CNV). | [
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PMC9429973 | The phase 1b portion evaluated the safety of pirtobrutinib at a continuous dose of 200 mg QD from Cycle 1, Day 1 plus venetoclax starting on Cycle 2, Day 1 with a standard 5-week dose ramp to 400 mg QD (PV) and PV plus rituximab at 375 mg/m2 on Cycle 1, Day 1, then 500 mg/m2 on Day 1 of Cycles 2-6 (PVR). | [
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PMC11297139 | The protein-bead conjugate was washed stringently for five times using high salt wash buffer and eluted using acidic elution buffer with a composition suggested by manufacturer. | [
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PMC11240052 | Circular RNAs (circRNAs) are a class of non-coding regulatory RNAs that are mainly formed through the back-splicing of pre-mRNA (7,8). | [
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PMC11790971 | Based on the multimodal images and corresponding cell masks, cellular features were extracted using the CellProfiler software. | [
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PMC11564322 | Therefore, the aim of our study was to investigate the mechanism of action of EDPs (VGVAPG and VVGPGA peptides) in cancerous cells derived from the immunological system, i.e., the HL-60, K562, and MEG-A2 cell lines. | [
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PMC8164677 | CI=D1/D1x + D2/D2x Since the platinum drugs are assumed to act through DNA binding, platinum accumulation was measured to determine if there was any correlation between the combined drug action and the level of platinum. | [
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PMC11583010 | In an effort to improve on the therapeutic window of the currently approved nectin-4 ADC, the main objective of this project was to develop a second-generation ADC against nectin-4 with optimized linker payload stability, higher DAR, and differentiated payload to yield improved clinical efficacy and safety. | [
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PMC11759751 | Results of a meta-analysis of R/R DLBCL treated with CD19 CAR T cell therapy showed a CR rate of 49.2% in the CD19 CAR T cell therapy group of 263 patients included . | [
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PMC11770199 | mMSCs-GFP (2 × 10), mMSCs-p14 (2 × 10), or normal saline was administrated intratumorally into these mice. | [
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PMC11297139 | e Odds ratio that an activated gene is included in the cancer-related GO terms shown in Fig. 4c, comparing the genes linked to the upregulated cREs versus unlinked genes (P values for the enrichment of the linked genes versus the unlinked genes: migration = 0.034, cell adhesion = 0.038, two-sided Fisher’s exact test). | [
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PMC10454535 | Our results suggest that this combination of BTZ and PIN decreases MM cell viability synergistically by inducing apoptosis and oxidative stress in MM cells. | [
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PMC5415764 | Anti-rabbit GAPDH antibody was used as internal reference. | [
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PMC9429973 | The median time of neutrophil engraftment (14 days,14days,13.5days, respectively) and platelet engraftment(13 days, 13days, 12days, respectively) were not significantly different between the three groups. | [
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PMC6627640 | Cells were treated with the indicated dosages of cisplatin for 6 h and cells assayed for survival 3 days later (Figure 1B). | [
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PMC11401350 | The T cells were activated through the T cell receptor (TCR) with anti-mCD3 and anti-mCD28 antibodies. | [
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PMC9646302 | In conclusion, these results indicate that LAPTM5 may be a new therapeutic target for ccRCC via activation of the RAC1-JNK/p38 axis. | [
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PMC9964654 | This strategic approach allows healthy cells to be spared undesired effects, while drug effectiveness and pharmacokinetic profiles can be improved . | [
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PMC11361748 | Quantitation of neutrophil fluorescence signal (surface area measurements) from (C). | [
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PMC10237474 | Hence, alternative and complementary cell lines are required to address these issues. | [
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PMC11322866 | SA-β-gal staining was performed using an SA-β-gal staining kit (C0602; Beyotime). | [
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PMC11532793 | In all analyses, transcripts were considered to be differentially expressed (DE) under an FDR control of 0.05. | [
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PMC11310713 | The ovary is an organ having a small and oval-like shape and contains ovarian follicles inside. | [
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PMC9622879 | The pricing in this study is the MMR pricing, which is adopted from. | [
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PMC10958426 | Volcano plot of DEGs between tumor subclones in each patient. | [
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PMC10114490 | B ROC curve with 95% confidence interval (shadowed) of the 10-times repeated threefold CV for (top) diHLC-T and (bottom) HepG2 cells. | [
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PMC11711347 | In a separate 100 mL Erlenmeyer flask, 5 mmol of proline was dissolved in 10 mL of 95% ethanol. | [
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PMC10094992 | A close inspection of the NR6-ALDH1A3 crystallographic structure revealed that NR6 binds the tyrosine residue 472 (Y472) of ALDH1A3, which is non-conserved in all the other human ALDH1A isoenzymes, and this drives its selectivity against this isoform. | [
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PMC10713411 | are being discovered and studied. | [
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PMC10047551 | The prognostic value of PD-L1 methylation has shown conflicting results, as both high and low PD-L1 promoter methylation have been associated with shorter overall survival . | [
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PMC11711871 | The initial decrease in Na and K excretion in the GR rats on a NSD might indicate an altered tubular GR activity that is not observed on HSD. | [
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PMC11629461 | The cell transfection reagent jetPRIME® (#101000046) was bought from Polyplus‐Transfection (Illkirch, France). | [
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PMC11768927 | The co-administration of these recombinant viruses enhanced T-cell activation, reduced metastases, and improved survival in mouse breast cancer models. | [
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PMC7504302 | These attributes granted mesothelin the Food and Drug Administration (FDA) approval for the diagnosis of MPM. | [
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PMC11536589 | The KPC210 cell lines were isolated in our laboratory from a spontaneous LSL-KRAS, LSL-TRP53, PDX1-CRE (KPC) tumor following previously established protocols (Kamerkar et al. 2017; Zheng et al. 2015). | [
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"tags": [
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"... |
PMC11708541 | Results confirmed that the instantaneous cortical LSCI and ECoG approach provided temporal and spatial information on the ictogenesis process and enabled the evaluation of pharmaceutical treatments' effectiveness in treating several types of epileptic seizures in vivo models (Fig. 14). | [
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PMC10376064 | Several studies in animal models have previously reported beneficial effects of DMF treatment on 1-methyl-4-phenyl-1,2,3,6-tetrahydropyridine-(MPTP)- or Aβ-mediated neurotoxicity , stroke, intracerebral hemorrhage , as well as learning and memory in streptozotocin-induced rat models . | [
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... |
PMC9429973 | Enrollment is planned to start by June 2022. | [
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PMC11732628 | miR-490-3p, micro RNA-490-3p; TUNEL, transferase dUTP nick end labelling; NC, negative control; DAPI, 4’,6-diamidino-2-phenylindole; ns, no significance. | [
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... |
PMC10706275 | Our initial step involved demonstrating the viability of this approach by incorporating HSA into the NC_048595.1 within the CHO-K1 cells. | [
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PMC9429973 | Results: Here we show that regulation of lipid homeostasis by lipin1 is required for HSPC and LSC function. | [
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... |
PMC10926885 | Tumour purity statistics for several tumours were previously summarised by Thorsson et al. The connection between tumour purity and NDE1 expression levels was then determined by integrating these data with NDE1 expression levels in the relevant samples. | [
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"tags": [
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PMC11721295 | Together, these data reveal an epithelial KRAS-dependent secretome containing tumor-promoting and immunosuppressive components that may provide future therapeutic targets. | [
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PMC11774251 | Red dots indicate individual records in the control group and blue dots indicate individual records in the Tan-I treated group. ( | [
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PMC11277157 | For partitioning the DJ-1 dependent transcriptomic signature from that of the siRNA response perse (i.e., siRNA RULC), we also show in a unified network the genes identified by the siRNA RULC and the KD DJ-1 set (Supplementary Figure S2). | [
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... |
PMC9429973 | Results: From March 2018 to September 2021, 196 patients included in 64 centers started VEN as monotherapy for CLL (tolerance population), 195 met the selection criteria (analysis population) and 113 could be evaluated (evaluable population). | [
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"tags": [
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PMC8735881 | The sequence of a fusion inhibitor peptide P41 was genetically connected to the N- or C-termini of 10E8 scFv through a flexible (GGGGS)n linker, generating eight GPI-anchored bifunctional constructs named CMI01 ∼ CMI08. ( | [
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PMC11295144 | The α4β3δ-GABAARs are generally localized outside of GABAergic synapses and they mediate tonic inhibition (Farrant and Nusser, 2005). | [
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... |
PMC11770199 | Later, cDNA was subjected to qPCR analysis using ChamQ SYBR qPCR Master Mix (#Q331-02, Vazyme). | [
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"O",
"O",
"O",
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",",... |
PMC9545714 | Mutations of enzymes that are uniquely involved in acylceramide synthesis result in various autosomal recessive congenital ichthyoses with impaired barrier function. | [
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"tokens": [
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... |
PMC11519583 | d Representative images of MPs at 3 days after transfection with the respective siRNAs, followed by staining with SPiDER-βGal (magenta) and DAPI (cyan). | [
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... |
PMC9429973 | In univariate analysis no factors were significantly associated with OS after HSCT. | [
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PMC11657744 | During centriole maturation, distinct morphological changes occur at the distal ends of centrioles, where the vicinity of the triple microtubule transitions to a doublets. | [
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... |
PMC11653168 | This additional work will provide more direct evidence of STAT3 dependency. | [
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PMC9429973 | Patients in the ST group were significantly older, had a lower WBC count, peripheral blast count and lactate dehydrogenase level at diagnosis. | [
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... |
PMC9429973 | Since there were no genetic test results for the children before 2010, only the 105 patients after 2010 had gene sequencing results, which allowed genotyping. | [
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"O",
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... |
PMC11680562 | On the other hand, xanthan gum, a polysaccharide, improves the gel's stability and viscosity, thereby establishing a homogenous and durable matrix for incorporating 5-Fu and CuO NPs . | [
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"O",
... |
PMC8633974 | Phalloidin-iFluor 647 marked cell boundaries. | [
{
"tags": [
"O",
"O",
"O",
"O",
"O",
"O"
],
"tokens": [
"Phalloidin-iFluor",
"647",
"marked",
"cell",
"boundaries",
"."
]
}
] |
PMC7153288 | MTT assay and flow cytometry analysis were performed on the A549 cell line to evaluate the cytotoxicity. | [
{
"tags": [
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"B-CellLine",
"O",
"O",
"O",
"O",
"O",
"O",
"O"
],
"tokens": [
"MTT",
"assay",
"and",
"flow",
"cytometry... |
PMC11525293 | Overall, we propose the dual effect of thalidomide in reducing SARS-CoV-2 viral re-entry and inflammation through p63 degradation to weaken SARS-CoV-2 entry into host cells and mitigate lung inflammation, making it a valuable option in clinical management of COVID-19. | [
{
"tags": [
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
... |
PMC11770746 | Oxaliplatin, which is used to treat metastatic colon cancer, elicits symptomatic neurotoxicity in more than 70% of the patients, often leading to discontinuation of the treatment. | [
{
"tags": [
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
... |
PMC11365983 | A–C) Western immunoblot analysis demonstrates that meningeal expression of core Hh components is dysregulated by Foxc1 mutation. ( | [
{
"tags": [
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O"
],
"tokens": [
"A",
"–",
"C",
... |
PMC9429973 | 147 (92%) and 149 (94%) patients completed treatment with ibrutinib and venetoclax, respectively. | [
{
"tags": [
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O"
],
"tokens": [
"147",
"(",
"92",
"%",
... |
PMC11188874 | Similar results were observed in HeLa cells following HDAC6 KO (Fig. 5C). | [
{
"tags": [
"O",
"O",
"O",
"O",
"O",
"B-CellLine",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O"
],
"tokens": [
"Similar",
"results",
"were",
"observed",
"in",
"HeLa",
"cells... |
PMC11806106 | C, D Half-time of activation (C) or deactivation (D) were evaluated by a one-phase mono-exponential fit based on (A, B) and Supplementary Fig. 4A–F (mean ± SEM, significance calculated against DAMGO, Brown–Forsyth & Welch’s ANOVA, P values: MetEnk C: 0.4637, D: 0.4374; Fentanyl C: <0.0001, D: 0.3526; Methadone C: 0.005... | [
{
"tags": [
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
... |
PMC10994876 | The findings from this assay, presented in Fig. 5, reveal that the apoptosis rate was reduced when there was an overexpression of YAP5SA. | [
{
"tags": [
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O"
],
"tok... |
PMC10253553 | Given that concurrent inhibition of mTORC1 and mTORC2 by Torin 2 non-selectively reduced the viability of HK2 and 786-0 cells, we tested whether selective inhibition of mTORC2 would reduce the viability of 786-0 cells without reducing the viability of HK2 cells. | [
{
"tags": [
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"B-CellLine",
"O",
"B-CellLine",
"I-CellLine",
"I-CellLine",
"O",
"O",
"O",
... |
PMC11291697 | 3Overstimulation of NMDA receptors due to GLDC downregulation and glycine accumulation. | [
{
"tags": [
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O"
],
"tokens": [
"3Overstimulation",
"of",
"NMDA",
"receptors",
"due",
"to",
"GLDC",
"downregulation",
"and",... |
PMC11243198 | Further, BAS 07019774 was more effective in reducing U87MG cell viability in comparison to GANT61, while their effects on TG98 cells were comparable (Figure 5B). | [
{
"tags": [
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"B-CellLine",
"O",
"O",
"O",
"O",
"O",
"B-CellLine",
"O",
"O",
"O",
"O",
"O",
"B-CellLine",
"O",
"O",
"O"... |
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