id
stringlengths
30
30
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stringclasses
3 values
sentence
stringlengths
10
1.38k
token
stringlengths
1
16
complexity
float64
0
0.86
difficulty
stringclasses
5 values
3X0EMNLXEPPWIOH0DDHWV2B1W1GPVS
biomed
Both receptors can bind BMP2, BMP4, and GDF5, although GDF5 shows higher affinity for BMPR1B (Koenig et al. 1994; ten Dijke et al. 1994; Yamaji et al. 1994; Nishitoh et al. 1996; Chalaux et al. 1998).
affinity
0.413043
neutral
35U0MRQMUJ7EXO5ZYD4H626BMWLOVB
biomed
Positional cloning identifies the mon gene as the zebrafish ortholog of mammalian transcriptional intermediary factor 1γ (TIF1γ), a member of the TIF1 family of transcriptional coactivators and corepressors (Le Douarin et al. 1995; Friedman et al. 1996; Kim et al. 1996; Venturini et al. 1999; Peng et al. 2002).
Kim
0.413043
neutral
3K8CQCU3KE19US5SN890DFPK3UKNW5
biomed
However, up-regulation of Sox9 is not sufficient to establish testis development in this mutant, as occurs in Odsex and other gain-of-function mutants where Sox9 is misexpressed in the XX gonad [ 24, 25].
XX
0.416667
neutral
362E9TQF2HQLJ541BNSQM47FN70IGL
biomed
In the absence of Sry expression—in XX embryos, or in XY embryos carrying a deletion of Sry—cells in the gonad follow an ovarian differentiation pathway.
XX
0.578125
neutral
3VDI8GSXAFTSUZSO21GZ9FD1KCT8G3
biomed
As the LTM7 ES cell line that we used in our RNAi experiments is a female (XX) cell line, DNA methylation is globally reduced in these cells [26].
XX
0.6
difficult
3KI0JD2ZU1IMXSYZGJF7JO4HFDM76D
biomed
Disruption of Sox9 expression in the XY gonad causes male-to-female sex reversal [ 21, 22], whereas increasing the dose of Sox9 in the XX gonad leads to testis development [ 23– 25].
XX
0.609375
difficult
3XAOZ9UYRZR1WO2H6CCWOJUVCSYQ1W
biomed
In light of the observation that the Wnt4 -/- XX gonad does not increase significantly in size ( Figure 6), it is possible that the FGF9/SOX9-expressing population did not reach a critical threshold.
XX
0.625
difficult
3YGE63DIN8X69WDLM27223T7V1EW08
biomed
The strong expression levels produced with the tet-off vectors, combined with the ability to reduce this expression by several orders of magnitude with tetracycline [14], allowed for a stringent test of how a highly effective pharmaceutical inhibitor of Aβ production would impact the progression of amyloid pathology and whether reversal of these lesions might be possible following such treatment.
lesions
0.416667
neutral
373L46LKP76MG2KQJWY5WXE873BKJ7
biomed
However, this reduction in bone resorption occurred with normal osteoclast activity, as assessed by in vitro culturing.
culturing
0.416667
neutral
3RKHNXPHGWWVUIVKVV2J3ZNJOJ9KU3
biomed
Collectively, these findings have challenged the dogma that alpha-crystallin is purely a structural protein necessary for light refraction, and have led to the realization that alpha-crystallin may have a variety of biological functions in the lens.
dogma
0.416667
neutral
3C8QQOM6JP115XI2MEP6ZWCNJORLIZ
biomed
Collectively, these findings have challenged the dogma that alpha-crystallin is purely a structural protein necessary for light refraction, and have led to the realization that alpha-crystallin may have a variety of biological functions in the lens.
dogma
0.578125
neutral
337F8MIIMZDU0UU1CW1J7BAGB8G40V
biomed
HY performed Northern blotting.
blotting
0.416667
neutral
3KTCJ4SCVG1AB94PEJ5F7AAQ2R71MQ
biomed
In addition, we could not detect full-length or smaller PGC-1α proteins by Western blotting.
blotting
0.48913
neutral
322ZSN9Z5GKVG3RSAYPTRMCL8J7T4Q
biomed
While this small fraction of protein may not be detectable by immunofluorescence, Western blotting shows that some mutant protein does progress beyond the ER (35-45 kDa species in Figure 3A).
blotting
0.5
neutral
3DA79LNS59VAY78OAKKAHHKFUJH3TL
biomed
ELK, AK, EV and MHL performed Western blotting and immunohistochemistry experiments.
blotting
0.5
neutral
3JMQI2OLFZ5ALM516D4ALR0ZWEEDNM
biomed
Our in situ hybridization data suggest that rhodopsin expression is markedly reduced at P6, but that it attains levels indistinguishable from wild-type by P14.
hybridization
0.416667
neutral
3OREP8RUT2BBWXQV5D090H32SHGBG5
biomed
Microarray and in situ hybridization analyses revealed a modest increase in the number of S-opsin-positive cells and widespread derepression of many cone-specific genes within rod photoreceptor cells.
hybridization
0.425
neutral
3H781YYV6TID85OLZ41608OCL86TE1
biomed
Moreover, Cot-1 hybridization and analysis of RBMY expression demonstrated that MSCI initiates normally in the XY body of mid-pachytene Dmrt7 mutant cells.
hybridization
0.5
neutral
3PKJ68EHDNWVECJIDBV8J5YGFM8HJ1
biomed
MX generated the null mutation, bred all the mice used for this study and generated the statistical data and the immunocytochemical data with MyoVII, AM conducted the tract tracing studies of cochlear afferents and helped with the histological analysis and assembly of image plates, UP carried out the in situ hybridization for neurotrophins and assembled the plates for these data, BF wrote the manuscript, carried out most of the neuronal tracing and immunocytochemistry for acetylated tubulin and data presentation.
hybridization
0.546875
neutral
3E24UO25QZQTIYQYX5W9UAQC52W6O2
biomed
In order to better characterize the defects in heterochromatin organization, we performed two-color DNA fluorescence in situ hybridization (FISH) experiments to reveal the spatial distribution of pericentric and centric chromosomal regions, which in mouse are mainly composed of large blocks of major and minor satellite repeats, respectively [20].
hybridization
0.65
difficult
3RIHDBQ1NEYLFKP3G880ZXQXJGXHMZ
biomed
Such a dietary management of the disease, however, is not entirely satisfactory especially in times of metabolic decompensation due to infection, injuries and other stressors.
stressors
0.420455
neutral
3126F2F5F83FGDVEINSMVYNFW6EEPC
biomed
Furthermore, according to our unpublished data, loci 8 on chromosome 17 controls lymphocyte adherence during development of CIA.
CIA
0.421053
neutral
3XQ4XW3OD9CKYPZQHK1FO2J1MM2S29
biomed
Therefore, the gene within the small-effect QTL could affect CIA severity through controlling arthritis-related phenotypes.
CIA
0.458333
neutral
3UQ1LLR26A8MZFZ4AQXTIYO46GHALF
biomed
We present an extensive study of gene expression patterns in LNs of both genetically susceptible and resistant strains at four different phases of CIA.
CIA
0.484375
neutral
3J94SKDEKIP6VXZV2D8ORA0D5TK5DU
biomed
CIA = collagen-induced arthritis; CII = collagen type II; LOD = logarithm of the odds; MHC = major histocompatibility complex; PCR = polymerase chain reaction; QTL = quantitative trait locus; RA = rheumatoid arthritis.
CIA
0.555556
neutral
3EKTG13IZU3N1G8T7TNYRPJ40X6MLB
biomed
No other CIA genes have previously been typed in this region, but the central part of chromosome 11 is known to contain a number of inflammation loci, such as Eae22, Eae6b, Eae23 and Eae7 [20-22].
CIA
0.642857
difficult
3IZPORCT1F9CC02VLG4HLWK7P31RH2
biomed
It has been shown that CorA mutants confer resistance to cobalt toxicity [9].
cobalt
0.421875
neutral
3J9UN9O9J3SK3CDMF3ONDDZZT560JI
biomed
HY performed Northern blotting.
HY
0.421875
neutral
3ZCC2DXSD747VW469B0ZFS87IMTYYA
biomed
Suppression of transgene expression abruptly arrested progression of pathology (Figure S6), but again without any sign of reduction.
Suppression
0.421875
neutral
3IZVJEBJ6AK5H245ZE7QA8XGP6Z6Z4
biomed
Further, although the polymorphism assessed typically resides within a gene known to protect bronchial epithelium from carcinogens, oxidants, or DNA damage, the selection of the particular polymorphism for study is largely empiric, and not based on known functional properties.
carcinogens
0.484375
neutral
3XQ4XW3OD9CKYPZQHK1FO2J1MNV2SE
biomed
Hyperactivity nonspecifically inhibits choice-driven changes in movement, the key element behind all cognitive behavioral paradigms.
Hyperactivity
0.425
neutral
302OLP89DZ7TWB5YXD4UFFYHC81CA1
biomed
In the mice with deficiencies of the Plg network [27], thrombus formation time was reduced in the Plg-/- mice, but increased in the PAI-/- mice, suggesting that alterations in plasmin activity that affect the rate of clot lysis, can modulate the events leading to occlusive thrombus formation.
clot
0.425
neutral
3FCO4VKOZ4DQA7REM1Y5VCWUWBA7EY
biomed
Chemokines and adhesion molecules were upregulated in the joint at the initiation phase of arthritis in animal models [21,22], while genes involved in cartilage destruction and bone erosion were differentially expressed at the late phase of arthritis in animal models of RA [15,16].
erosion
0.425
neutral
30EV7DWJTVV5CCU03S57W1OEJCVY65
biomed
In addition, single nucleotide polymorphisms within the human PGC-1α gene have been shown to be associated with obesity, hypertension, and diabetes [25,26,27,28,29,30].
hypertension
0.428571
neutral
33EEIIWHK77HI0IFDQWLV71B1W5QVL
biomed
Bmp2 and Bmp4 are also expressed in the AER, where Prx1::cre is inactive, and these domains of expression are not affected (Figure 1A–1D, black arrows).
AER
0.431818
neutral
3HXCEECSQMT70MEB5X2ITZH9OGRYZV
biomed
BMP activity also plays an indirect role in limb patterning as a key component of a feedback loop between SHH production in the posterior limb bud and fibroblast growth factor production in the overlying apical ectodermal ridge (AER).
AER
0.5
neutral
3UEDKCTP9VQTW7JOIN98T79ZG867KI
biomed
However, the morphologic features of the glomeruli and proximal/distal tubules were unremarkable (Figure 2D).
tubules
0.431818
neutral
3NFWQRSHVEE19E2BAFM5J7UN7FDGFX
biomed
Instead, a distinct lung hypoplasia at the saccular stage, characterized by arrested or partially developed distal epithelial tubules, reduced terminal sac space, delayed type I AECs differentiation and delayed vascular development, was consistently observed at late gestational stages in Dhcr7-/- embryos.
tubules
0.578125
neutral
37VUR2VJ6APX2NSY1UB14E5E8D31C8
biomed
By the same token, huntingtin shuttles through the nucleus, where it is required for proper nuclear localization of its transcription factor partners, suggesting that huntingtin may play a role in transcription cascades in extraembryonic tissues that pattern the embryo [18].
shuttles
0.433333
neutral
3ZURAPD288N45ZC8SW12CKQH5QVF1X
biomed
They are also not essential for the formation of specific membrane domains such as lipid rafts, as exogenously added recombinant annexin A7 redistributed to similar positions in a density gradient containing membranes derived from red blood cells of anxA7-/-mice.
gradient
0.433333
neutral
3IYI9285WS04X482RJH78E102UXCJH
biomed
Neurons that are generated prenatally in the proliferative ventricular layer of the neopallial cortex subsequently migrate through the intermediate zone to form the different cortical cell layers in a declining inside-out gradient of cell maturation.
gradient
0.5625
neutral
3EFNPKWBMSO9IYBXCIW0X6IAX8K036
biomed
The binding sites have been localised to the amino terminal GGYY and GYGG motifs in sorcin and to the GYPP motif in the amino terminus of annexin A7.
motifs
0.433333
neutral
3E24UO25QZQTIYQYX5W9UAQC52WO6K
biomed
In the latter three models, some or all olfactory receptor genes might share transcription factor binding motifs, and in the first model, olfactory receptor genes might share a common recombination signal.
motifs
0.460526
neutral
3I6NF2WGIGW97H9M439WXV3AIL05G4
biomed
These data provide tentative locations of a large set of promoter regions, allowing computational searches for shared sequence motifs that might be involved in the intriguing transcriptional regulation of olfactory receptors.
motifs
0.515625
neutral
3LCXHSGDLT6CT5B6A4WGQ3SQJPSSEB
biomed
Since mr-s does not contain obvious DNA binding motifs, we suppose that there is a sequence-specific transcription factor(s) which interacts with mr-s.
motifs
0.666667
difficult
3TKSOBLOHLGF5GIKPR8VZ6C5C4TBBT
biomed
Many of the double transgenic mice showed similar circular patterns of swimming near the edge of the tank when tested in the Morris water maze.
Morris
0.433333
neutral
3K2CEDRACB1BKTGYG2PPDGTLUAXMTJ
biomed
Previous studies with exogenous or local applications of NT-3 to developing primary sensory axons have indicated that this neurotrophin can attract and induce axonal branching (Ulupınar et al. 2000; Özdinler and Erzurumlu 2001, Özdinler et al. 2004).
applications
0.433333
neutral
3Z33IC0JC0MBQ11TWOLZ9CBMRW1V94
biomed
Two prominent pathologies were characterized in the Crx-/- retina: (1) An absolute block in outer segment morphogenesis was noted, with the block occuring at the elongation stage of outer segment formation; (2) Crx-/- photoreceptors exhibited a severe perturbation in synapse formation.
elongation
0.434211
neutral
3PUV2Q8SV448KDG43NZ1UW05FP5BD0
biomed
The relative proportion of alphaA and alphaB changes from a molar ratio of 1:3 in the pericentral and germative zones to a molar ratio of 3:1 in the elongation zone and fiber cells [2,3].
elongation
0.484375
neutral
30OITAWPBQ368069RZ4VUBKDJIOH90
biomed
Such aggregates, which are often found at the nuclear periphery, are also revealed by DAPI staining as a typical signature of p150CAF-1 loss-of-function.
periphery
0.434211
neutral
3MWOYZD5WVO1PJWQWMIQWLCY0SLNOT
biomed
At the periphery of each pericentric domain, centric regions form individual entities (Figure 4A).
periphery
0.4375
neutral
3K3IX1W4S6RCQ0E22IQ0ZFXOBQNAPI
biomed
In various manipulations of the neurotrophins it has been noted that molecular markers for proprioceptive axons such as PV or calcitonin gene-related peptide for nerve growth factor–responsive axons are compromised (Ringstedt et al. 1997; Patel et al. 2000), thus PV immunostaining in Bax/NT-3 double KOs cannot reveal the extent of proprioceptive axons in the periphery.
periphery
0.5
neutral
3KA7IJSNW65H9AJU8WQWUQHUT83BP9
biomed
Carrier females occasionally manifest haemoglobin H inclusions, but are otherwise intellectually and physically normal.
inclusions
0.4375
neutral
38G0E1M85M59ATPWUZGQ58Y04HGVU0
biomed
Neurotrophin-3 (NT-3) is a key requirement for the development of proprioceptive inputs to motor neurons (Chen and Frank 1999; Chen et al. 2003).
inputs
0.4375
neutral
3TL87MO8CMPHV6GCL6JLWZZV3WUFLX
biomed
The precise need for sterols in biological membranes still remains poorly defined, though its link with microdomains (variously termed rafts, caveoli etc.) may be part of the answer [1].
rafts
0.4375
neutral
38B7Q9C28G5QBBMSVGDRXKVNA3A96R
biomed
They are also not essential for the formation of specific membrane domains such as lipid rafts, as exogenously added recombinant annexin A7 redistributed to similar positions in a density gradient containing membranes derived from red blood cells of anxA7-/-mice.
rafts
0.455882
neutral
3XJOUITW8UR258EQ8VW6UPDQ4BUQTA
biomed
Thus, PPARδ activation, rather than merely an increase of PPARδ levels, is an essential element for fiber switching and its associated functional manifestations.
manifestations
0.4375
neutral
3G57RS03HH5JSN1F5OO7VR9982P25C
biomed
Huntington's disease (HD) is a dominantly inherited neurodegenerative disorder that is caused by CAG repeats in the HD locus that extend a polyglutamine tract in a ubiquitous HEAT domain protein called huntingtin [1].
tract
0.4375
neutral
3JGHED38EDROGC85M2AZ2FOAENL7YJ
biomed
Positional cloning identifies the mon gene as the zebrafish ortholog of mammalian transcriptional intermediary factor 1γ (TIF1γ), a member of the TIF1 family of transcriptional coactivators and corepressors (Le Douarin et al. 1995; Friedman et al. 1996; Kim et al. 1996; Venturini et al. 1999; Peng et al. 2002).
Le
0.4375
neutral
3QHITW7OYO9XQCFH2V5PZKNYGM9QAP
biomed
Beaded filament mRNA levels are greatly increased in differentiating lens epithelium and have been suggested as a pan-specific marker for lens fiber development [17].
filament
0.440476
neutral
31JUPBOORN48GR6PDSDFM7I9GSML8R
biomed
Although actin filament formation has been shown to be necessary for differentiation of lens epithelial cells [15], the significance of alpha-crystallin's interaction with actin in differentiation is not known.
filament
0.454545
neutral
356TQKY9XFX916HN9YC53208L8C78Z
biomed
Research on calpains has linked them with a wide variety of functions including muscle growth, development, degeneration (3), neuronal growth and neurodegeneration [4], cell cycle progression [5,6], signal cascades triggered by integrins and growth factors [7], membrane protrusion [8], remodeling of the cytoskeleton and cell migration [9-15], and regulation of cell death via both necrosis and apoptosis [16-22].
cascades
0.441176
neutral
3RWB1RTQDJNY7CLN5K6M3ORTL2I8P7
biomed
By the same token, huntingtin shuttles through the nucleus, where it is required for proper nuclear localization of its transcription factor partners, suggesting that huntingtin may play a role in transcription cascades in extraembryonic tissues that pattern the embryo [18].
cascades
0.473684
neutral
3OQQD2WO8I6KPTSDG8L63AI6J2VI3D
biomed
At their apex, these neurons have a membranous outer segment, which contains proteins involved in the phototransduction cascade.
cascade
0.442308
neutral
3T8DUCXY0N6WD9X4RTLK8UN1UBQT9R
biomed
Alternatively, PPARδ may be activated by a distal upstream signaling component such as a kinase cascade.
cascade
0.640625
difficult
3ACRLU860NEDCJU4ZIAL0EIQF2ZEBR
biomed
Nuclei were incubated in buffers with different salt concentrations ranging from 100 mM NaCl to 1 M NaCl.
Nuclei
0.444444
neutral
3CMIQF80GNQW3A3ECIODJFLCK3EQ6U
biomed
The Capn4 targeting strategy employed by Arthur and colleagues involved disrupting the C-terminus of the calpain small subunit by insertion of the PGK-Neo cassette into the middle of exon 9, which caused truncation of the protein [31].
Arthur
0.444444
neutral
371QPA24C2OEO4U9NG6RTO5IWZXT1D
biomed
In the embryo, alterations in the determination or migration of melanoblasts from the neural crest affect the number or distribution of pigment cells in the skin (reviewed in Reedy et al. 1998).
Reedy
0.446429
neutral
3ZG552ORAM40QHGUBF6KZP38LQX2VP
biomed
Cholesterol is a necessary membrane constituent of all mammalian, reptile and avian cells, as well as a few other organisms, but not all eukaryotic organisms.
constituent
0.446429
neutral
306W7JMRYYYW3IKDMFOL84M44Y38BM
biomed
Surprisingly, we did not observe this severe alteration in heterochromatin organization in primary mouse embryonic fibroblasts (MEFs) following p150CAF-1 depletion by RNAi.
alteration
0.447368
neutral
3YCT0L9OMM9GNBOJ33ZZGQMZXHTSN0
biomed
Linkages for human RA have been found in this particular region [24].
Linkages
0.447368
neutral
3MQKOF1EE2O08GEFYEVXHADQPQNDWI
biomed
Since receptor activation causes dissociation of HOMER proteins [35], PAX6 may be released as a result of synaptic activity, allowing it to interact with DNCL1.
dissociation
0.45
neutral
3JMQI2OLFZ5ALM516D4ALR0ZWEJND1
biomed
Indeed, in past studies where hyperactivity was not a factor, we established a clear relationship between amyloid load and cognitive ability [31].
load
0.45
neutral
3OND0WXMHWFN3WXQZAKHMPLOAE6EH7
biomed
Salzer et al. [7] not only demonstrated the presence of annexin A7 in red blood cells, they also showed that annexin A7 and sorcin were enriched in membrane raft domains of nanovesicles formed from red blood cells in vitro.
raft
0.45
neutral
3FI30CQHVKJ9Z41PT0RNOQQDY3E6BZ
biomed
All four ES cell lines transmitted through the germline, leading to the establishment of, CK4/ECFP and CK6/ECFP, two strains of mice having cyan fluorescent protein expression and, YC5/EYFP and 2A4/EYFP, two strains having widespread yellow fluorescent protein expression.
cyan
0.45
neutral
3P4ZBJFX2V3X60SBPKQN5AGB14WFWQ
biomed
Indeed, homozygous HD patients make no wild-type huntingtin, and, in the mouse, a single mutant Hdh allele's worth of mutant huntingtin can fully rescue huntingtin deficiency embryonic phenotypes [15,51].
worth
0.45
neutral
371Q3BEXDH9A40226RATBDT87VWSZC
biomed
A related disorder with the cancer predisposition of XP combined with the neurodevelopmental complications of CS (XPCS), although rare, has also been described [18].
predisposition
0.45
neutral
3QD8LUVX4XYKT34CTD90LH35LBVX5N
biomed
For example, a QTL for PROP avoidance has been suggested on chromosome 7 [16], and we observe a suggestive QTL for quinine taste on chromosome 8 (Figure 2); in neither case are Tas2rs found at these loci (data not shown).
PROP
0.45
neutral
3PUOXASB573SZL63XLA2UIOIF76Z97
biomed
Gametes differ between the sexes in size and morphology, sometimes dramatically so, reflecting their very different roles in zygote formation.
morphology
0.45
neutral
374UMBUHN5PYB7473DVBAKO90WOTC3
biomed
The grossly abnormal collecting duct morphology makes it impossible to pinpoint the molecular defect in these knock-in mice.
morphology
0.464286
neutral
3OID399FXG7YXUSK8PLXDMRQUNXDFK
biomed
The fate of the nucleic acid-containing cells in the posterior capsular region of younger lenses is not known at this time, nor is the morphology of earlier stage lenses.
morphology
0.55
neutral
3VP28W7DUNK10VXG07AU4EATI51ZFZ
biomed
Grafting and extirpation experiments have shown that it is this polarized interdigital tissue which directs digit morphology [15].
morphology
0.666667
difficult
3MQKOF1EE2O08GEFYEVXHADQPRGWDW
biomed
BMP2, BMP4, and BMP7 are all expressed in the interdigital mesenchyme [4,14], and experiments inhibiting BMP signaling in this tissue suggested that differential levels of BMPs in the interdigital mesenchyme might be the relevant factor directing digit morphology [15].
morphology
0.6875
difficult
3KA7IJSNW65H9AJU8WQWUQHUT91BP9
biomed
Taken together, mr-s is a novel repressor molecule possibly involved in the development of retinal photoreceptors and pineal gland.
pineal
0.452381
neutral
3S8APUMBJXJ5IXU0UTURIW3QR2LBFB
biomed
Here we identified mouse mr-s, which is predominantly expressed in retinal photoreceptors and the pineal gland.
pineal
0.515625
neutral
3UV0D2KX1MJLXY9RFEK4AIXKHA5F4A
biomed
In the present study, we identified a novel gene, mr-s, which is predominantly expressed in retinal photoreceptors and the pineal gland.
pineal
0.575
neutral
3CVBMEMMXBG2UHIGC26BGFT7OS07HE
biomed
In situ hybridization and RT-PCR showed significant reduction of mr-s signal in the Crx KO retina and pineal gland.
pineal
0.65
difficult
34O39PNDK682LNZ9LOULZLH9UQRBR1
biomed
Other defects included absence or hypoplasia of the pineal gland, cortical polymicrogyria, white matter changes in the corpus callosum and grey matter changes in the cerebellum [11-13].
pineal
0.65
difficult
30UZJB2POHC8D5XY9O2CE1E1EHN35O
biomed
In this assay, serial dilutions of protein homogenate are passed through a cellulose acetate filter; particles larger than the pore size of the filter become trapped in the membrane and are revealed by immunoblotting [22].
cellulose
0.453125
neutral
3RIHDBQ1NEYLFKP3G880ZXQXJG2MH9
biomed
As well as the full-length ATRX protein of ~280 kDa, which is encoded by a transcript of ~10 kb, we recently demonstrated that a truncated isoform called ATRXt (~200 kDa) is produced from a transcript of around 7 kb, which arises when intron 11 fails to be spliced from the primary transcript and an alternative intronic poly(A) signal is used [4].
poly
0.453125
neutral
3SR6AEG6W5TL91EHZBWBTSD4SQBHYP
biomed
Recent experiments addressing the temporal constraints of transcription factor action in proliferating neural progenitor cells adds to the idea that defined temporal windows, during which transcription factors act to control distinct downstream target genes, are of key importance to neuronal fate acquisition.
progenitor
0.453125
neutral
3Y40HMYLL1I1EIURUEH8TTVLKSOXU5
biomed
The first, or primitive, wave of hematopoiesis originates from ventral mesoderm and gives rise to progenitor cells that differentiate in embryonic blood islands.
progenitor
0.589286
neutral
329E6HTMSW2BVOI1GB6IGQXJB7IK3Q
biomed
This production of different cell types at different times appears to derive from differences in the intrinsic properties of progenitor cells involved in the transcription or chromatin modification.
progenitor
0.642857
difficult
39WICJI5ATS6KJHNGC9S35LWFGVZ3R
biomed
In the development of the mammalian retina, a diverse range of cell types is generated from a pool of multipotent retinal progenitor cells.
progenitor
0.6875
difficult
3PUOXASB573SZL63XLA2UIOIF859ZI
biomed
Hematopoiesis in vertebrates, from zebrafish to humans, is an evolutionarily conserved program that produces two waves of stem or progenitor cells that differ both in their embryonic origins and in the lineages of differentiated blood cells produced (Palis and Yoder 2001; Orkin and Zon 2002; Galloway and Zon 2003).
progenitor
0.75
difficult
31MBOZ6PAORASUW2U4TKOTES6J7LCX
biomed
The presence of a reduced but detectable amount of protein in the 35–45 kDa range indicates that mutant protein is transported out of the ER, but with greatly reduced efficiency.
ER
0.454545
neutral
3FBEFUUYRK54GUWXNMRRTF67GLSA67
biomed
Diminished response to dDAVP, diminished abundance of mature glycosylated protein in mutant animals, and the transport of a fraction of mutant protein beyond the ER in MDCK cells are all consistent with the notion that AQP2-F204V misfolding is limited and that it may retain some residual water transporting activity.
ER
0.5
neutral
3538U0YQ1FU0F2QNF0FL0D5E3A43F8
biomed
The high-mannose core oligosaccharide is added in the ER and is later modified and elaborated in the Golgi apparatus [26].
ER
0.625
difficult
35F6NGNVM8JSZQ9BCWN0UYWVZMV7TO
biomed
Both type II AECs, producing pulmonary surfactants, and type I AECs, lining the expanded alveoli, are important for alveolar maturation.
alveoli
0.458333
neutral
3PKJ68EHDNWVECJIDBV8J5YGFM2JHX
biomed
Overexpression of Shh in the distal lung epithelium resulted in the absence of functional alveoli and an increase in interstitial tissue caused by an increased proliferation of both epithelial and mesenchyme cells [26].
alveoli
0.578947
neutral