reference stringlengths 7 774 ⌀ | aptamer_chemistry stringclasses 21
values | aptamer_name stringlengths 1 164 | target_name stringlengths 2 1.2k ⌀ | aptamer_sequence stringlengths 2 380 | origin stringclasses 6
values | target_chemistry stringclasses 11
values | external_id stringclasses 509
values | target_sequence stringclasses 357
values | new_affinity stringlengths 3 193 ⌀ |
|---|---|---|---|---|---|---|---|---|---|
S. Gopinath et al. An efficient RNA aptamer against human influenza B virus hemagglutinin. J. Biochem. 139(2006): 837-846.Miyakawa, Shin, et al. "Structural and molecular basis for hyperspecificity of RNA aptamer to human immunoglobulin G." RNA Journal 14,(2008): 1154-1163. | RNA | Influenza B Hemagglutinin (A20) (ID# 7808) | Influenza B Hemagglutinin (HA) | GGGAGCUCAGCCUUCACUGCACUCCGGCUGGUGGACGCGGUACGAGCAAUUUGUACCGGAUGGAUGUUCGGGCAGCGGUGUGGCAGGGAUGAGCGGCACCACGGUCGGAUCCAC | https://www.aptagen.com/apta-index/ | Protein | null | null | 720 pM |
Rhie, A., et al. "Characterization of 2'-fluoro-RNA aptamers that bind preferentially to disease-associated conformations of prion protein and inhibit conversion." Journal of Biological Chemistry, 278 (2003): 39697-705.Miyakawa, Shin, et al. "Structural and molecular basis for hyperspecificity of RNA aptamer to human i... | 2'-F-RNA | PrP Fibrils (SAF-93) (ID# 7487) | PrP Fibrils | GGGAGACAAGACUAGACGCUCAACUACGAACUCAUGACACAAGGAUGCAAUCUCAUCCCGCCAGCCCACCGUUUCGACAUGAGACUCACAACAGUUCCCUUUAGUGAGGGUUAAUU | https://www.aptagen.com/apta-index/ | Protein | null | null | 23.4 nM |
A. K. Dey et. al. Structural characterization of an anti-gp120 RNA aptamer that neutralizes R5 strains of HIV-1. RNA 11:873-884Miyakawa, Shin, et al. "Structural and molecular basis for hyperspecificity of RNA aptamer to human immunoglobulin G." RNA Journal 14,(2008): 1154-1163. | 2'-F-RNA | HIV-1 R5 SU Glycoprotein gp120 (B40) (ID# 7731) | HIV-1 R5 gp120 | GGGAGACAAGACUAGACGCUCAAUGUGGGCCACGCCCGAUUUUACGCUUUUACCCGCACGCGAUUGGUUUGUUUUCGACAUGAGACUCACAACAGUUCCCUUUAGUGAGGGUUAAUU | https://www.aptagen.com/apta-index/ | Protein | null | null | 21 nM |
Seetharaman et al. "Immobilized RNA switches for the analysis of complex chemical and biological mixture." Nature Biotechnology, 19(2001):336-341.Miyakawa, Shin, et al. "Structural and molecular basis for hyperspecificity of RNA aptamer to human immunoglobulin G." RNA Journal 14,(2008): 1154-1163. | RNA | Theophylline + Flavin Mononucleotide (AR7) (ID# 7750) | Theophylline and FMN | GGAUAAUAGCCGUAGGUUGCGAAAGCGACCCUGAUGAGCCUUAGGAUAUGUCUGGAUACCAUGCAUGAUGCACCUUGGCAGUCUUACAGAAGGACGUCGAAACGGUAGCGAGAGCUC | https://www.aptagen.com/apta-index/ | Protein | null | null | Not Mentioned in Database |
Liu, Meng et. al. "In Vitro Selection of a DNA Aptamer Targeting Degraded Protein Fragments for Biosensing" Angewandte Chemie 10.(2020)Miyakawa, Shin, et al. "Structural and molecular basis for hyperspecificity of RNA aptamer to human immunoglobulin G." RNA Journal 14,(2008): 1154-1163. | DNA | Rapt1 (ID# 8055) | Recombinant Clostridium Difficile Toxin B | CTCCCATGCTATTATGGCTAGCGCAGGAGGCCACACCGGA | https://www.aptagen.com/apta-index/ | Protein | null | null | 8.9 nM |
Hirao, I., et al. "In Vitro Selection of RNA Aptamers that Bind to Colicin E3 and Structurally Resemble the Decoding Site of 16S Ribosomal RNA." Biochemistry, 43 (2004): 3214-3221.Miyakawa, Shin, et al. "Structural and molecular basis for hyperspecificity of RNA aptamer to human immunoglobulin G." RNA Journal 14,(2008... | RNA | Colicin E3 (F1-1) (ID# 7490) | Colicin E3 | GGGAGAAUUCCGACCAGAAGCUUACUGUCCUCCCUUCAGAGAGCGCGGGACCCUUAACUUGGGGCCCACGAACAGCUUCAGUUCCGUCUCGGCGUCAUAUGUGCGUCUACAUGGAUCCUCA | https://www.aptagen.com/apta-index/ | Protein | null | null | 2 nM |
Miyachi, Y. (2009). Selection of a dna aptmaer that binds 8-ohdg using gmp-agarose. Bioorganic & Medicinal Chemistry Letters, 19(2009), 3619-3622.Miyakawa, Shin, et al. "Structural and molecular basis for hyperspecificity of RNA aptamer to human immunoglobulin G." RNA Journal 14,(2008): 1154-1163. | DNA | 8-OHdG (22) (ID# 7687) | 8-OHdG | TAATACGACTCACGTATAGGGAATTCGTCGACGGATGCGGGCGATCGGCGGGGGGTGCGTGCGCTCTGTGCCAGGGGGTGGGACAGATCATATGGGGGTGCTCAGGTCGACGCATGCGCCG | https://www.aptagen.com/apta-index/ | Other | null | null | 0.1 nM |
Seiwert, S., et al. "RNA aptamers as pathway-specific MAP kinase inhibitors." Chemistry and Biology, 7 (2000): 833-843.Miyakawa, Shin, et al. "Structural and molecular basis for hyperspecificity of RNA aptamer to human immunoglobulin G." RNA Journal 14,(2008): 1154-1163. | RNA | ppERK2/ERK2 (ID# 7488) | ppERK2/ERK2 | GGGAGAGCCAUACCUGACAAAGACGCUAGCGAAUUGGUUCCUCACUCAAAAGUAGGGGAAAGCGUUAUUAAGAAACCAAAAUUUGACAGGUUACGCAUCCUGCAUCCUCCAGGUUACGCAUCC | https://www.aptagen.com/apta-index/ | Protein | null | null | 4.7 nM |
Ali et al. "Fluorogenic DNAzyme Probes as Bacterial Indicators." Angewandte Chemie International Edition, 50 (2011): 3751-3754.Miyakawa, Shin, et al. "Structural and molecular basis for hyperspecificity of RNA aptamer to human immunoglobulin G." RNA Journal 14,(2008): 1154-1163. | DNA | Crude Extracellular Mixture of E. coli – cis (ID# 7647) | Crude Extracellular Mixture (CEM) of E. coli | CACGGATCCTGACAAGGATGTGTGCGTTGTCGAGACCTGCGACCGGAACACTACACTGTGTGGGATGGATTTCTTTACAGTTGTGTGCAGCTCCGTCCGACTCTTCCTAGCTATGGTTCGATCAAGA | https://www.aptagen.com/apta-index/ | Protein | null | null | Not Mentioned in Database |
Liu and Lu. "Adenosine-Dependent Assembly of Aptazyme-Functionalized Gold Nanoparticles and Its Application as a Colorimetric Biosensor." Analytical Chemistry, 76 (2004): 1627-1632.Miyakawa, Shin, et al. "Structural and molecular basis for hyperspecificity of RNA aptamer to human immunoglobulin G." RNA Journal 14,(2008... | DNA | Adenosine (ID# 7604) | ATP | ACTCATCTGTGAGACTCACTATAGGAAGAGATGTCAACTCGTGCACGAGTTGACATCTCTTCTCCGAGCCGGTCGAAATATTGGAGGAAGCTCGAGCTGGAGGAAAAGTGAGTCTCACAGATGAGT | https://www.aptagen.com/apta-index/ | Small Organic | null | null | 1 mM |
Boltz A, Plater B, Hock B, et al. (2011) Bi-specific Aptamers Mediating Tumour Cell Lysis. J Biol Chem. 286: 21896-21905.Miyakawa, Shin, et al. "Structural and molecular basis for hyperspecificity of RNA aptamer to human immunoglobulin G." RNA Journal 14,(2008): 1154-1163. | DNA | ADCC Bi-specific Aptamer (bsA17) (ID# 7861) | CD16a positive cell lines | CCACTGCGGGGGTCTATACGTGAGGAAGAAGTGGGCAGGTCGCAGGTCGGAGGGAAAAGTTATCAGGCTGGATGGTAGCTCGGTCGGGGTGGGTGGGTTGGCAAGTCTGATTAGTTTTGGAGTACTCGCTCC | https://www.aptagen.com/apta-index/ | Protein | null | null | Not Mentioned in Database |
Jeong, Sunjoo, et al. "In Vitro Selection of the RNA Aptamer against the Sialyl Lewis X and Its Inhibition of the Cell Adhesion." Biochemical and Biophysical Research Communications, 281 (2001): 237ƒ??243.Miyakawa, Shin, et al. "Structural and molecular basis for hyperspecificity of RNA aptamer to human immunoglobulin ... | RNA | Sialyl Lewis X (5) (ID# 7465) | Sialyl Lewis X | CCGUAAUACGACUCACUAUAGGGGAGCUCGGUACCGAAUUCAAGGUACUCUGUGCUUGUCGAUGUGUAUUGAUGGCACUUUCGAGUCAACGAGUUGACAGAACAAGUAGUCAAGCUUUGCAGAGAGGAUCCUU | https://www.aptagen.com/apta-index/ | Other | null | null | 0.085 nM |
Oteng, Eugene, et al. "High-efficiency enrichment enables identification of aptamers to circulating Plasmodium falciparum-infected erythrocytes" Scientific Reports 10, 9706Miyakawa, Shin, et al. "Structural and molecular basis for hyperspecificity of RNA aptamer to human immunoglobulin G." RNA Journal 14,(2008): 1154-1... | DNA | Malaria.1 (ID# 8053) | Plasmodium falciparum | CCAAACGCGCTGGTTTGGAATGCTTAGAGTTTGATCGATGCCTAA | https://www.aptagen.com/apta-index/ | Cells | null | null | 60 nM |
doi:10.1039/C7TB01276D Miyakawa, Shin, et al. "Structural and molecular basis for hyperspecificity of RNA aptamer to human immunoglobulin G." RNA Journal 14,(2008): 1154-1163. | DNA | Thrombin Aptamer 2 (ID# 8160) | Thrombin | TTTTTTTTTTTTTTTTTTTTAGTCCGTGGTAGGGCAGGTTGGGGTGACT | https://www.aptagen.com/apta-index/ | Protein | null | null | 0.027 nM |
Liu, Meng et. al. "In Vitro Selection of a DNA Aptamer Targeting Degraded Protein Fragments for Biosensing" Angewandte Chemie 10.(2020)Miyakawa, Shin, et al. "Structural and molecular basis for hyperspecificity of RNA aptamer to human immunoglobulin G." RNA Journal 14,(2008): 1154-1163. | DNA | Dapt1 (ID# 8054) | Degraded Clostridium Difficile Toxin B | AATAGTCTGGTTCGGTGCTTGGTGCGATGTGTTAGTCAGACTCTTGTGTG | https://www.aptagen.com/apta-index/ | Other | null | null | 60 nM |
Famulok and Szostak. "Stereospecific Recognition of Tryptophan Agarose by in Vitro Selected RNA." Journal of American Chemical Society, 114 (1992): 3990Miyakawa, Shin, et al. "Structural and molecular basis for hyperspecificity of RNA aptamer to human immunoglobulin G." RNA Journal 14,(2008): 1154-1163. | RNA | D-Tryptophan (MF-10) (ID# 7515) | D-Tryptophan | AGUAAUACGACUCACUAUAGGGAGAAUUCCGACCAGAAGUUGGCGUUGGCAUGACGCGGGGAAUCGGGUGCAUCGAUGACUACUCCUGGGCCCACGUCUGUUGUUGACGUCACAGCUUGAUUUAGGAUAGCGCUUGGGCAGUCGUGCAGUGGA | https://www.aptagen.com/apta-index/ | Small Organic | null | null | 18 nM |
Aguirre et al. "A Sensitive DNA Enzyme-Based Fluorescent Assay for Bacterial Detection" Biomolecules, 3 (2013): 563-577.Miyakawa, Shin, et al. "Structural and molecular basis for hyperspecificity of RNA aptamer to human immunoglobulin G." RNA Journal 14,(2008): 1154-1163. | DNA | Crude Extracellular Mixture of E. coli – trans (ID# 7948) | Crude Extracellular Matrix of E. coli | GATGTGCGTTGTCGAGACCTGCGACCGGAACACTACACTGTGTGGGGATGGATTTCTTTACAGTTGTGTG | https://www.aptagen.com/apta-index/ | Protein | null | null | Not Mentioned in Database |
https://doi.org/10.1002/anie.202100345Miyakawa, Shin, et al. "Structural and molecular basis for hyperspecificity of RNA aptamer to human immunoglobulin G." RNA Journal 14,(2008): 1154-1163. | DNA | Aptamer-1 (ID# 8171) | S/RBD receptor binding | ATCCAGAGTGACGCAGCATCGAGTGGCTTGTTTGTAATGTAGGGTTCCGGTCGTGGGTTGGACACGGTGGCTTAGT | https://www.aptagen.com/apta-index/ | Protein | null | null | Not Mentioned in Database |
Kim, J., W.; Kim, E., Y.; Kim, S., Y; Byun, S., K.; Lee, D.; Oh, K.; Kim, W., K.; Han, B., S.; Chi, S.; Lee, S., C.; Bae, K. Identification of DNA Aptamers toward Epithelial Cell Adhesion Molecule via Cell-SELEX. Molecules and Cells, 2014, 37(10), 742-746 ISSN: 0219-1032Miyakawa, Shin, et al. "Structural and molecular ... | DNA | EpCAM EP166 (ID# 7939) | EpCAM | CGCGGAAGCGTGCTGGGCCAACAGAGGGACAAACGGGGGAAGATTTGACGTCGACGACACATAACCCAGAGGTCGAT | https://www.aptagen.com/apta-index/ | Protein | null | null | 5.48 nM |
Ma, X., Wang, W., Chen, X., Xia, Y., Wu, S., Duan, N., and Wang, Z. "Selection, identification, and application of Aflatoxin B1 aptamer." European Food Research and Technology 238.6 (2014): 919-925.Miyakawa, Shin, et al. "Structural and molecular basis for hyperspecificity of RNA aptamer to human immunoglobulin G." RNA... | DNA | Aflatoxin B1 Aptamer (AFB1) (ID# 7887) | Aflatoxin B1 | AGCAGCACAGAGGTCAGATGGTGCTATCATGCGCTCAATGGGAGACTTTAGCTGCCCCCACCTATGCGTGCTACCGTGAA | https://www.aptagen.com/apta-index/ | Small Organic | null | null | 11.39 nM |
https://doi.org/10.1002/anie.202100345Miyakawa, Shin, et al. "Structural and molecular basis for hyperspecificity of RNA aptamer to human immunoglobulin G." RNA Journal 14,(2008): 1154-1163. | DNA | Aptamer-2 (ID# 8172) | S/RBD receptor binding | ATCCAGAGTGACGCAGCAATTACCGATGGCTTGTTTGTAATGTAATGTAGGGTTCCGTCGGATTGGACACGGTGGCTTAGT | https://www.aptagen.com/apta-index/ | Protein | null | null | 4.5 nM |
(This content is a preprint and has not been peer-reviewed.)Miyakawa, Shin, et al. "Structural and molecular basis for hyperspecificity of RNA aptamer to human immunoglobulin G." RNA Journal 14,(2008): 1154-1163. | DNA | K16-1 (ID# 8148) | Kanamycin A | CGCATACCAGCTTAGTTCAGAATTCATTGGAGCGTGGCGTGGATGCCCGATGGACCGCCCCAGGGTGCAGATAGTAAGTGCAATCTCGGC | https://www.aptagen.com/apta-index/ | Small Organic | null | null | 342±74 nM |
Song, Y., Song, J., Wei, X., Huang, M., Sun, M., Zhu, L., Lin, B., Shen, H., Zhu, Z., and C. Yang. 2020. Discovery of Aptamers Targeting the Receptor-Binding Domain of the SARS-CoV‑2 Spike Glycoprotein. Analytical Chemistry 2020, 92, 9895−9900. https://dx.doi.org/10.1021/acs.analchem.0c01394Miyakawa, Shin, et al. "Stru... | DNA | CoV2-RBD-4C (ID# 8161) | SARS-CoV-2 S protein / SARS-CoV-2 RBD | ATCCAGAGTGACGCAGCATTTCATCGGGTCCAAAAGGGGCTGCTCGGGATTGCGGATATGGACACGT | https://www.aptagen.com/apta-index/ | Protein | null | null | 13.6 nM |
null | DNA | ['"DNA (5\'-D(*GP*GP*TP*TP*GP*GP*TP*GP*TP*GP*GP*TP*TP*GP*G)-3\')"'] | [] | ["'GGTTGGTGTGGTTGG'"] | https://www.nakb.org/ | Small Molecule | 148D | [] | Not Mentioned in Database |
null | RNA | ["'RNA APTAMER'"] | ["'AMP'"] | ["'GGGUUGGGAAGAAACUGUGGCACUUCGGUGCCAGCAACCC'"] | https://www.nakb.org/ | Small Molecule | 1AM0 | ["'c1nc(c2c(n1)n(cn2)C3C(C(C(O3)COP(=O)(O)O)O)O)N'"] | Not Mentioned in Database |
null | DNA | ["'ATP-BINDING DNA APTAMER'"] | ["'AMP'"] | ["'ACCTGGGGGAGTATTGCGGAGGAAGGT'"] | https://www.nakb.org/ | Small Molecule | 1AW4 | ["'c1nc(c2c(n1)n(cn2)C3C(C(C(O3)COP(=O)(O)O)O)O)N'"] | Not Mentioned in Database |
null | DNA | ["'Name not Specified'"] | ["'AAR'"] | ["'CGACCAACGTGTCGCCTGGTCG'"] | https://www.nakb.org/ | Small Molecule | 1DB6 | ["'C(CC(C(=O)N)N)CNC(=[NH2+])N'"] | Not Mentioned in Database |
null | RNA | ["'VITAMIN B12 BINDING RNA'"] | ["'B12'"] | ["'GGAACCGGUGCGCAUAACCACCUCAGUGCGAGCAA'"] | https://www.nakb.org/ | Small Molecule | 1DDY | ["'Cc1cc2c(cc1C)n(cn2)C3C(C(C(O3)CO)OP(=O)(O)OC(C)CNC(=O)CCC4(C(C5C6(C(C(C7=[N]6[Co+2]89[N]5=C4C(=C1[NH]8C(=CC2=[N]9C(=C7C)C(C2CCC(=O)N)(C)CC(=O)N)C(C1CCC(=O)N)(C)C)C)CCC(=O)N)(C)CC(=O)N)C)CC(=O)N)C)O'"] | Not Mentioned in Database |
null | RNA | ["'THEOPHYLLINE-BINDING RNA'"] | ["'TEP'"] | ["'GGCGAUACCAGCCGAAAGGCCCUUGGCAGCGUC'"] | https://www.nakb.org/ | Small Molecule | 1EHT | ["'CN1c2c([nH]cn2)C(=O)N(C1=O)C'"] | Not Mentioned in Database |
null | RNA | ["'RNA APTAMER'"] | ["'CNC'"] | ["'GGAACCGGUGCGCAUAACCACCUCAGUGCGAGCAA'"] | https://www.nakb.org/ | Small Molecule | 1ET4 | ["'Cc1cc2c(cc1C)n(cn2)C3C(C(C(O3)CO)OP(=O)(O)OC(C)CNC(=O)CCC4(C(C5C6(C(C(C7=[N]6[Co+2]89(N5C4=C(C1=[N]8C(=CC2=[N]9C(=C7C)C(C2CCC(=O)N)(C)CC(=O)N)C(C1CCC(=O)N)(C)C)C)C#N)CCC(=O)N)(C)CC(=O)N)C)CC(=O)N)C)O'"] | Not Mentioned in Database |
null | RNA | ["'MALACHITE GREEN APTAMER RNA'"] | [" 'ROS'"] | ["'GGAUCCCGACUGGCGAGAGCCAGGUAACGAAUGGAUCC'"] | https://www.nakb.org/ | Small Molecule | 1F1T | [" 'CN(C)c1ccc2c(c1)OC3=CC(=[N+](C)C)C=CC3=C2c4ccccc4'"] | Not Mentioned in Database |
null | RNA | ['"RNA (5\'-R(*AP*CP*CP*GP*UP*CP*AP*GP*AP*GP*GP*AP*CP*AP*CP*GP*GP*UP*U)-3\')"', ' "RNA (5\'-R(*AP*AP*AP*AP*AP*GP*UP*CP*CP*UP*C)-3\')"'] | [" 'BTN'"] | ["'ACCGUCAGAGGACACGGUU'", " 'AAAAAGUCCUC'"] | https://www.nakb.org/ | Small Molecule | 1F27 | [" 'C1C2C(C(S1)CCCCC(=O)O)NC(=O)N2'"] | Not Mentioned in Database |
null | RNA | ['"RNA (5\'-R(*GP*GP*CP*GP*UP*GP*UP*AP*GP*GP *AP*UP*AP*UP*GP*CP*UP*UP*CP*GP*GP*CP*AP*GP*AP*AP*GP *GP*AP*CP*AP*CP*GP*CP*C)-3\')"'] | ["'FMN'"] | ["'GGCGUGUAGGAUAUGCUUCGGCAGAAGGACACGCC'"] | https://www.nakb.org/ | Small Molecule | 1FMN | ["'Cc1cc2c(cc1C)N(C3=NC(=O)NC(=O)C3=N2)CC(C(C(COP(=O)(O)O)O)O)O'"] | Not Mentioned in Database |
null | DNA | ['"DNA 5\'-D(*GP*GP*TP*TP*GP*GP*TP*GP*TP*GP*GP*TP*TP*GP*G)-3\'"'] | [" 'ALPHA-THROMBIN light chain'", " 'ALPHA-THROMBIN heavy chain'"] | ["'GGTTGGTGTGGTTGG'"] | https://www.nakb.org/ | Protein | 1HAO | [" 'TFGSGEADCGLRPLFEKKSLEDKTERELLESYIDGR'", " 'IVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTENDLLVRIGKHSRTRYERNIEKISMLEKIYIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKETWTANVGKGQPSVLQVVNLPIVERPVCKDSTRIRITDNMFCAGYKPDEGKRGDACEGDSGGPFVMKSPFNNRWYQMGIVSWGEGCDRDGKYGFYTHVFRLKKWIQKVIDQFGE'"] | Not Mentioned in Database |
null | DNA | ['"5\'-D(*GP*GP*TP*TP*GP*GP*TP*GP*TP*GP*GP*TP*TP*GP*G)-3\'"'] | [" 'Thrombin light chain'", " 'Thrombin heavy chain'"] | ["'GGTTGGTGTGGTTGG'"] | https://www.nakb.org/ | Protein | 1HAP | [" 'TFGSGEADCGLRPLFEKKSLEDKTERELLESYIDGR'", " 'IVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTENDLLVRIGKHSRTRYERNIEKISMLEKIYIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKETWTANVGKGQPSVLQVVNLPIVERPVCKDSTRIRITDNMFCAGYKPDEGKRGDACEGDSGGPFVMKSPFNNRWYQMGIVSWGEGCDRDGKYGFYTHVFRLKKWIQKVIDQFGE'"] | Not Mentioned in Database |
null | DNA | ['"DNA 5\'-D(*GP*GP*TP*TP*GP*GP*TP*GP*TP*GP*GP*TP*TP*GP*G)-3\'"'] | [" 'ALPHA-Thrombin light chain'", " 'ALPHA-Thrombin heavy chain'"] | ["'GGTTGGTGTGGTTGG'"] | https://www.nakb.org/ | Protein | 1HUT | [" 'TFGSGEADCGLRPLFEKKSLEDKTERELLESYIDGR'", " 'IVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTENDLLVRIGKHSRTRYERNIEKISMLEKIYIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKETWTANVGKGQPSVLQVVNLPIVERPVCKDSTRIRITDNMFCAGYKPDEGKRGDACEGDSGGPFVMKSPFNNRWYQMGIVSWGEGCDRDGKYGFYTHVFRLKKWIQKVIDQFGE'"] | Not Mentioned in Database |
null | RNA | ['"RNA (5\'-R(P*AP*GP*AP*AP*GP*GP*AP*GP*CP*GP*U)-3\')"', ' "RNA (5\'-R(P*AP*CP*AP*GP*GP*UP*AP*GP*GP*UP*CP*GP*CP*U)-3\')"'] | ["'ARG'"] | ["'AGAAGGAGCGU'", " 'ACAGGUAGGUCGCU'"] | https://www.nakb.org/ | Small Molecule | 1KOC | ["'C(CC(C(=O)O)N)CNC(=[NH2+])N'"] | Not Mentioned in Database |
null | RNA | ['"RNA (5\'-R(P*AP*GP*AP*AP*GP*GP*AP*GP*UP*GP*U)-3\')"', ' "RNA (5\'-R(P*AP*CP*GP*GP*UP*UP*AP*GP*GP*UP*CP*GP*CP*U)-3\')"'] | ["'CIR'"] | ["'AGAAGGAGUGU'", " 'ACGGUUAGGUCGCU'"] | https://www.nakb.org/ | Small Molecule | 1KOD | ["'C(CC(C(=O)O)N)CNC(=O)N'"] | Not Mentioned in Database |
null | RNA | ["'RNA aptamer'"] | ["'GND'"] | ["'GGGAGCUUGAUCCCGGAAACGGUCGAUCGCUCCC'"] | https://www.nakb.org/ | Small Molecule | 1NBK | ["'[H]N=C(N)NCCCC(C(=O)O)[NH3+]'"] | Not Mentioned in Database |
null | RNA | ['"5\'-R(*GP*GP*AP*UP*CP*GP*CP*AP*UP*UP*UP*GP*GP*AP*CP*UP*UP*CP*UP*GP*CP*C)-3\'"', ' "5\'-R(*CP*GP*GP*CP*AP*CP*CP*AP*CP*GP*GP*UP*CP*GP*GP*AP*UP*C)-3\'"'] | [" 'NA'", " 'SRY'"] | ["'GGAUCGCAUUUGGACUUCUGCC'", " 'CGGCACCACGGUCGGAUC'"] | https://www.nakb.org/ | Small Molecule | 1NTA | [" '[Na+]'", " 'CC1C(C(C(O1)OC2C(C(C(C(C2O)O)NC(=N)N)O)NC(=N)N)OC3C(C(C(C(O3)CO)O)O)NC)(C=O)O'"] | Not Mentioned in Database |
null | RNA | ['"5\'-R(*GP*GP*AP*UP*CP*GP*CP*AP*UP*UP*UP*GP*GP*AP*CP*UP*UP*CP*UP*GP*CP*C)-3\'"', ' "5\'-R(*CP*GP*GP*CP*AP*CP*CP*AP*CP*GP*GP*UP*CP*GP*GP*AP*UP*C)-3\'"'] | [" 'SRY'", " 'MG'"] | ["'GGAUCGCAUUUGGACUUCUGCC'", " 'CGGCACCACGGUCGGAUC'"] | https://www.nakb.org/ | Small Molecule | 1NTB | [" 'CC1C(C(C(O1)OC2C(C(C(C(C2O)O)NC(=N)N)O)NC(=N)N)OC3C(C(C(C(O3)CO)O)O)NC)(C=O)O'", " '[Mg+2]'"] | Not Mentioned in Database |
null | RNA | ["'RNA Aptamer'"] | ["'MGR'"] | ["'GGAUCCCGACUGGCGAGAGCCAGGUAACGAAUGGAUCC'"] | https://www.nakb.org/ | Small Molecule | 1Q8N | ["'CN(C)c1ccc(cc1)C(=C2C=CC(=[N+](C)C)C=C2)c3ccccc3'"] | Not Mentioned in Database |
null | RNA | ["'RNA APTAMER'"] | ["'AMP'"] | ["'GGGAAGGGAAGAAACUGCGGCUUCGGCCGGCUUCCC'"] | https://www.nakb.org/ | Small Molecule | 1RAW | ["'c1nc(c2c(n1)n(cn2)C3C(C(C(O3)COP(=O)(O)O)O)O)N'"] | Not Mentioned in Database |
null | RNA | ['"RNA (5\'-R(GGCACGAGGUUUAGCUACACUCGUGCC)-3\')"'] | ["'TOA'", " 'TOC'", " 'TOB'"] | ["'GGCACGAGGUUUAGCUACACUCGUGCC'"] | https://www.nakb.org/ | Small Molecule | 1TOB | ["'C(C1C(C(C(C(O1)O)O)[NH3+])O)O'", " 'C1C(C(OC(C1O)C[NH3+])O)[NH3+]'", " 'C1C(CC(C(C1[NH3+])O)O)[NH3+]'"] | Not Mentioned in Database |
null | DNA | ['"DNA APTAMER [5\'-D (*TP*GP*AP*CP*CP*AP*GP*GP*GP*CP*AP*AP*AP*CP*GP*GP*TP*AP* GP*GP*TP*GP*AP*GP*TP*GP*GP*TP*CP*A)-3\']"'] | ["'AAR'"] | ["'TGACCAGGGCAAACGGTAGGTGAGTGGTCA'"] | https://www.nakb.org/ | Small Molecule | 2ARG | ["'C(CC(C(=O)N)N)CNC(=[NH2+])N'"] | Not Mentioned in Database |
null | RNA | ["'Class I RNA aptamer to GTP'"] | ["'GTP'"] | ["'GGGACGAAGUGGUUGGGCGCUUCGGCGUGUGAAAACGUCCC'"] | https://www.nakb.org/ | Small Molecule | 2AU4 | ["'c1nc2c(n1C3C(C(C(O3)COP(=O)(O)OP(=O)(O)OP(=O)(O)O)O)O)N=C(NC2=O)N'"] | Not Mentioned in Database |
null | DNA | ['"DNA (5\'-R(*(N68)P*G)-D(*CP*AP*GP*TP*TP*GP*AP*TP*CP*CP*TP*TP*TP*GP*GP*AP*TP*AP*CP*CP*CP*TP*GP*GP*T)-3\')"'] | [] | ["'XGCAGTTGATCCTTTGGATACCCTGGT'"] | https://www.nakb.org/ | Small Molecule | 2L5K | [] | Not Mentioned in Database |
null | RNA | ["'RNA (28-MER)'"] | [] | ["'GGGCAGUGAUGCUUCGGCAUAUCAGCCC'"] | https://www.nakb.org/ | Small Molecule | 2LUN | [] | Not Mentioned in Database |
null | DNA | ['"DNA (5\'-D(P*GP*GP*TP*TP*GP*GP*TP*GP*TP*GP*GP*TP*TP*GP*G)-3\')"'] | ["'1CF'"] | ["'GGTTGGTGTGGTTGG'"] | https://www.nakb.org/ | Small Molecule | 2LYG | ["'CC1C(C(C(C(O1)OCCO)O)O)O'"] | Not Mentioned in Database |
null | DNA | ["'G-rich VEGF aptamer'"] | [] | ["'TGTGGGGGTGGACGGGCCGGGTAGA'"] | https://www.nakb.org/ | Small Molecule | 2M53 | [] | Not Mentioned in Database |
null | RNA | ['"5\'-R(*GP*GP*AP*GP*CP*CP*UP*GP*GP*GP*AP*GP*CP*UP*CP*C)-3\'"', " 'RNA 16-mer with locked residues 9-10'"] | [] | ["'GGAGCCUGGGAGCUCC'", " 'CACGGUCCCAGACGUG'"] | https://www.nakb.org/ | Small Molecule | 2PN9 | [] | Not Mentioned in Database |
null | RNA | ['"5\'-R(P*GP*GP*AP*CP*CP*CP*(AP7)P*CP*CP*AP*CP*GP*GP*CP*GP*AP*GP*GP*UP*CP*CP*A)-3\'"'] | [] | ["'GGACCCACCACGGCGAGGUCCA'"] | https://www.nakb.org/ | Small Molecule | 2RRC | [] | Not Mentioned in Database |
null | RNA | ['"RNA (5\'-R(*AP*CP*UP*UP*GP*GP*UP*UP*UP*AP*GP*GP*UP*AP*AP*UP*GP*AP*GP*U)-3\')"'] | ["'TOA'", " 'TOC'", " '2TB'"] | ["'ACUUGGUUUAGGUAAUGAGU'"] | https://www.nakb.org/ | Small Molecule | 2TOB | ["'C(C1C(C(C(C(O1)O)O)[NH3+])O)O'", " 'C1C(C(OC(C1O)C[NH3+])O)[NH3+]'", " 'C1C(C(C(C(C1[NH3+])O)O)O)[NH3+]'"] | Not Mentioned in Database |
null | DNA | [" 'modified thrombin binding DNA aptamer'"] | ["'Thrombin heavy chain'", " 'Thrombin light chain'"] | [" 'GGTTGGTGTGGTTGG'"] | https://www.nakb.org/ | Protein | 3QLP | ["'IVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTENDLLVRIGKHSRTRYERNIEKISMLEKIYIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKETWTANVGKGQPSVLQVVNLPIVERPVCKDSTRIRITDNMFCAGYKPDEGKRGDACEGDSGGPFVMKSPFNNRWYQMGIVSWGEGCDRDGKYGFYTHVFRLKKWIQKVIDQFGE'", " 'TFGSGEADCGLRPLFEKKSLEDKTERELLESYIDGR'"] | Not Mentioned in Database |
null | DNA | [" 'DNA APTAMER'"] | ["'L-LACTATE DEHYDROGENASE'"] | [" 'CTGGGCGGTAGAACCATAGTGACCCAGCCGTCTAC'"] | https://www.nakb.org/ | Protein | 3ZH2 | ["'MAPKAKIVLVGSGMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGSNTYDDLAGADVVIVTAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKNCPNAFIIVVTNPVDVMVQLLHQHSGVPKNKIIGLGGVLDTSRLKYYISQKLNVCPRDVNAHIVGAHGNKMVLLKRYITVGGIPLQEFINNKLISDAELEAIFDRTVNTALEIVNLHASPYVAPAAAIIEMAESYLKDLKKVLICSTLLEGQYGHSDIFGGTPVVLGANGVEQVIELQLNSEEKAKFDEAIAETKRMKALA'... | Not Mentioned in Database |
null | DNA | [" 'Thrombin binding aptamer'"] | ["'Prothrombin'", " 'Prothrombin'"] | [" 'GGTTGGTGTGGTTGG'"] | https://www.nakb.org/ | Protein | 4DIH | ["'TFGSGEADCGLRPLFEKKSLEDKTERELLESYIDGR'", " 'IVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTENDLLVRIGKHSRTRYERNIEKISMLEKIYIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKETWTANVGKGQPSVLQVVNLPIVERPVCKDSTRIRITDNMFCAGYKPDEGKRGDACEGDSGGPFVMKSPFNNRWYQMGIVSWGEGCDRDGKYGFYTHVFRLKKWIQKVIDQFGE'"] | Not Mentioned in Database |
null | DNA | [" 'SOMAmer SL5'"] | ["'Platelet-derived growth factor subunit B'"] | [" 'XXACXGXXACACGCGXXXAXAGCX'"] | https://www.nakb.org/ | Protein | 4HQU | ["'SLGSLTIAEPAMIAECKTRTEVFEISRRLIDRTNANFLVWPPCVEVQRCSGCCNNRNVQCRPTQVQLRPVQVRKIEIVRKKPIFKKATVTLEDHLACKCETVAAARPVT'"] | Not Mentioned in Database |
null | DNA | [" 'DNA (27-MER)'"] | ["'Prothrombin'", " 'Prothrombin'"] | [" 'GTCCGTGGTAGGGCAGGTTGGGGTGAC'"] | https://www.nakb.org/ | Protein | 4I7Y | ["'IVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTENDLLVRIGKHSRTRYERNIEKISMLEKIYIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKETWTANVGKGQPSVLQVVNLPIVERPVCKDSTRIRITDNMFCAGYKPDEGKRGDACEGDSGGPFVMKSPFNNRWYQMGIVSWGEGCDRDGKYGFYTHVFRLKKWIQKVIDQFGE'", " 'TFGSGEADCGLRPLFEKKSLEDKTERELLESYIDGR'"] | Not Mentioned in Database |
null | RNA | [" 'RNA (84-MER)'"] | ["'BL3-6 Fab antibody'", " 'BL3-6 Fab antibody'"] | [" 'GGACGCGACCGAAAUGGUGAAGGACGGGUCCAGUGCGAAACACGCACUGUUGAGUAGAGUGUGAGCUCCGUAACUGGUCGCGUC'"] | https://www.nakb.org/ | Protein | 4KZE | ["'EISEVQLVESGGGLVQPGGSLRLSCAASGFYISYSSIHWVRQAPGKGLEWVASISPYSGSTYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARQGYRRRSGRGFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTH'", " 'SDIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISS... | Not Mentioned in Database |
null | DNA | [" 'SOMAmer SL1025'"] | ["'Interleukin-6'"] | [" 'GGCAGGXXXGGXAXXAACACGXXAAGXCGXGG'"] | https://www.nakb.org/ | Protein | 4NI7 | ["'MAPVPPGEDSKDVAAPHRQPLTSSERIDKQIRYILDGISALRKETCNKSNMCESSKEALAENNLNLPKMAEKDGCFQSGFNEETCLVKIITGLLEFEVYLEYLQNRFESSEEQARAVQMSTKVLIQFLQKKAKNLDAITTPDPTTNASLLTKLQAQNQWLQDMTTHLILRSFKEFLQSSLRALRQM'"] | Not Mentioned in Database |
null | DNA | ["'SOMAmer SL1025'"] | [" 'Interleukin-6'"] | ["'GGCAGGXXXGGXAXXAACACGXXAAGXCGXGG'"] | https://www.nakb.org/ | Protein | 4NI9 | [" 'MAPVPPGEDSKDVAAPHRQPLTSSERIDKQIRYILDGISALRKETCNKSNMCESSKEALAENNLNLPKMAEKDGCFQSGFNEETCLVKIITGLLEFEVYLEYLQNRFESSEEQARAVQMSTKVLIQFLQKKAKNLDAITTPDPTTNASLLTKLQAQNQWLQDMTTHLILRSFKEFLQSSLRALRQM'"] | Not Mentioned in Database |
null | null | [] | ["'Complement C5'"] | [] | https://www.nakb.org/ | Protein | 4WB2 | ["'GANLHLLRQKIEEQAAKYKHSVPKKCCYDGARVNFYETCEERVARVTIGPLCIRAFNECCTIANKIRKESPHKPVQLGR'"] | Not Mentioned in Database |
null | RNA | ["'RNA (36-MER)'"] | [" 'MG'", " '747'"] | ["'GGCGCGAGGAAGGAGGUCUGAGGAGGUCACUGCGCC'"] | https://www.nakb.org/ | Small Molecule | 5BJO | [" '[Mg+2]'", " 'CN1C(=NC(=Cc2cc(c(c(c2)F)O)F)C1=O)C=NO'"] | Not Mentioned in Database |
null | RNA | ["'RNA (36-MER)'"] | [" 'MG'", " 'DMS'", " '747'"] | ["'GGCGCGAGGAAGGAGGUCUGAGGAGGUCACUGCGCC'"] | https://www.nakb.org/ | Small Molecule | 5BJP | [" '[Mg+2]'", " 'CS(=O)C'", " 'CN1C(=NC(=Cc2cc(c(c(c2)F)O)F)C1=O)C=NO'"] | Not Mentioned in Database |
null | DNA | [" 'RE31'"] | ["'alpha thrombin-light chain'", " 'Thrombin heavy chain'"] | [" 'GTGACGTAGGTTGGTGTGGTTGGGGCGTCAC'"] | https://www.nakb.org/ | Protein | 5CMX | ["'TFGSGEADCGLRPLFEKKSLEDKTERELLESYIDGR'", " 'IVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTENDLLVRIGKHSRTRYERNIEKISMLEKIYIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKETWTANVGKGQPSVLQVVNLPIVERPVCKDSTRIRITDNMFCAGYKPDEGKRGDACEGDSGGPFVMKSPFNNRWYQMGIVSWGEGCDRDGKYGFYTHVFRLKKWIQKVIDQFGE'"] | Not Mentioned in Database |
null | DNA | [" 'HD22 (27mer)'", " 'HD1-deltaT3'"] | ["'thrombin light chain'", " 'Thrombin heavy chain'"] | [" 'GTCCGTGGTAGGGCAGGTTGGGGTGAC'", " 'GGNTGGTGTGGTTGG'"] | https://www.nakb.org/ | Protein | 5EW1 | ["'TFGSGEADCGLRPLFEKKSLEDKTERELLESYIDGR'", " 'IVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTENDLLVRIGKHSRTRYERNIEKISMLEKIYIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKETWTANVGKGQPSVLQVVNLPIVERPVCKDSTRIRITDNMFCAGYKPDEGKRGDACEGDSGGPFVMKSPFNNRWYQMGIVSWGEGCDRDGKYGFYTHVFRLKKWIQKVIDQFGE'"] | Not Mentioned in Database |
null | DNA | [" 'HD22 (27mer)'", " 'HD1-deltaT12'"] | ["'thrombin light chain'", " 'Thrombin heavy chain'"] | [" 'GTCCGTGGTAGGGCAGGTTGGGGTGAC'", " 'GGTTGGTGTGGNTGG'"] | https://www.nakb.org/ | Protein | 5EW2 | ["'TFGSGEADCGLRPLFEKKSLEDKTERELLESYIDGR'", " 'IVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTENDLLVRIGKHSRTRYERNIEKISMLEKIYIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKETWTANVGKGQPSVLQVVNLPIVERPVCKDSTRIRITDNMFCAGYKPDEGKRGDACEGDSGGPFVMKSPFNNRWYQMGIVSWGEGCDRDGKYGFYTHVFRLKKWIQKVIDQFGE'"] | Not Mentioned in Database |
null | DNA | [" 'DNA (32-MER)'"] | ["'L-lactate dehydrogenase'"] | [" 'TCGATTGGATTGTGCCGGAAGTGCTGGCTCGA'"] | https://www.nakb.org/ | Protein | 5HRU | ["'MGSSHHHHHHSSGLVPRGSHMENLYFQRGSMTPKPKIVLVGSGMIGGVMATLIVQKNLGDVVMFDVVKNMPQGKALDTSHSNVMAYSNCKVTGSNSYDDLKGADVVIVTAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKNLCPNAFIIVVTNPVDVMVQLLFEHSGVPKNKIIGLGGVLDTSRLKYYISQKLNVCPRDVNALIVGAHGNKMVLLKRYITVGGIPLQEFINNKKITDEEVEGIFDRTVNTALEIVNLLASPYVAPAAAIIEMAESYLKDIKKVLVCSTLLEGQYGHSNIFGGTPLVIGGTGVE... | Not Mentioned in Database |
null | RNA | ["'5-hydroxytryptophan RNA aptamer'"] | ["'4PQ'", " 'IRI'", " 'MG'"] | ["'GGACACUGAUGAUCGCGUGGAUAUGGCACGCAUUGAAUUGUUGGACACCGUAAAUGUCCUAACACGUGUCC'"] | https://www.nakb.org/ | Small Molecule | 5KPY | ["'c1cc2c(cc1O)c(c[nH]2)CC(C(=O)O)N'", " '[NH3][Ir+3]([NH3])([NH3])([NH3])([NH3])[NH3]'", " '[Mg+2]'"] | Not Mentioned in Database |
null | RNA | ["'GTP Class II RNA (34-MER)'"] | ["'GTP'"] | ["'GGCAGCCAGAAGAGCACGUAUACGCAAGGCUGUC'"] | https://www.nakb.org/ | Small Molecule | 5LWJ | ["'c1nc2c(n1C3C(C(C(O3)COP(=O)(O)OP(=O)(O)OP(=O)(O)O)O)O)N=C(NC2=O)N'"] | Not Mentioned in Database |
null | RNA | ["'RNA aptamer (69-MER)'"] | ["'1TU'", " 'SPM'"] | ["'GGGAGUACGGUGAGGGUCGGGUCCAGUAGGUACGCCUACUGUUGAGUAGAGUGUGGGCUCCGUACUCCC'"] | https://www.nakb.org/ | Small Molecule | 5OB3 | ["'Cc1nc(c(n1C)O)Cc2cc(c(c(c2)F)O)F'", " 'C(CCNCCCN)CNCCCN'"] | Not Mentioned in Database |
null | DNA | [' "DNA (5\'-D(*CP*G)-R(P*(85Y))-D(P*GP*AP*G)-R(P*(85Y)P*(85Y))-D(P*A)-R(P*(85Y))-D(P*GP*GP*G)-R(P*(85Y)P*(85Y))-D(P*AP*GP*AP*G)-R(P*(85Y))-D(P*CP*GP*(ATD))-3\')"'] | ["'Interleukin-1 alpha'"] | [" 'CGXGAGXXAXGGGXXAGAGXCGT'"] | https://www.nakb.org/ | Protein | 5UC6 | ["'SAPFSFLSNVKYNFMRIIKYEFILNDALNQSIIRANDQYLTAAALHNLDEAVKFDMGAYKSSKDDAKITVILRISKTQLYVTAQDEDQPVLLKEMPEIPKTITGSETNLLFFWETHGTKNYFTSVAHPNLFIATKQDYWVCLAGGPPSITDFQILENQA'"] | Not Mentioned in Database |
null | RNA | [" 'RNA (86-MER)'"] | ["'Heavy chain of Fab BL3-6S97N'", " 'Light chain of Fab BL3-6S97N'"] | [" 'GACGCGACCGAAAUGGUGAAGGACGGGUCCAGUGCGAAACACGCACUGUUGAGUAGAGUGUGAGCUCCGUAACUGGUCGCGUC'"] | https://www.nakb.org/ | Protein | 6B14 | ["'EVQLVESGGGLVQPGGSLRLSCAASGFYISYSSIHWVRQAPGKGLEWVASISPYSGSTYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARQGYRRRSGRGFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC'", " 'SDIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFA... | Not Mentioned in Database |
null | RNA | ["'RNA (36-MER)'"] | ["'IRI'", " 'MG'", " 'ACT'", " 'IR'"] | ["'GGCGCGAGGAAGGAGGUCUGAGGAGGUCACUGCGCC'"] | https://www.nakb.org/ | Small Molecule | 6E80 | ["'[NH3][Ir+3]([NH3])([NH3])([NH3])([NH3])[NH3]'", " '[Mg+2]'", " 'CC(=O)[O-]'", " '[Ir+4]'"] | Not Mentioned in Database |
null | RNA | ["'RNA (36-MER)'"] | ["'TFX'"] | ["'GGCGCGAGGAAGGAGGUCUGAGGAGGUCACUGCGCC'"] | https://www.nakb.org/ | Small Molecule | 6E81 | ["'Cc1ccc2c(c1)sc([n+]2C)c3ccc(cc3)N(C)C'"] | Not Mentioned in Database |
null | RNA | ["'RNA (36-MER)'"] | [" 'TFX'"] | ["'GGCGCGAGGAAGGUGGUCUGAGGAGGUCACUGCGCC'"] | https://www.nakb.org/ | Small Molecule | 6E82 | [" 'Cc1ccc2c(c1)sc([n+]2C)c3ccc(cc3)N(C)C'"] | Not Mentioned in Database |
null | RNA | ["'RNA (36-MER)'"] | [" 'J0D'"] | ["'GGCGCGAGGAAGGAGGUCUGAGGAGGUCACUGCGCC'"] | https://www.nakb.org/ | Small Molecule | 6E84 | [" 'C[n+]1ccc(c2c1cccc2)C=C3N(c4ccccc4S3)C'"] | Not Mentioned in Database |
null | DNA | ["'GA63A - TBA MODIFIED APTAMER'"] | [" 'Prothrombin'", " 'Prothrombin'"] | ["'GGTUGGTGTGGTTGG'"] | https://www.nakb.org/ | Protein | 6EO6 | [" 'TFGSGEADCGLRPLFEKKSLEDKTERELLESYIDGR'", " 'IVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTENDLLVRIGKHSRTRYERNIEKISMLEKIYIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKETWTANVGKGQPSVLQVVNLPIVERPVCKDSTRIRITDNMFCAGYKPDEGKRGDACEGDSGGPFVMKSPFNNRWYQMGIVSWGEGCDRDGKYGFYTHVFRLKKWIQKVIDQFGE'"] | Not Mentioned in Database |
null | DNA | [" 'NU172'"] | ["'Prothrombin'", " 'Prothrombin'"] | [" 'CGCCTAGGTTGGGTAGGGTGGTGGCG'"] | https://www.nakb.org/ | Protein | 6EVV | ["'TFGSGEADCGLRPLFEKKSLEDKTERELLESYIDGR'", " 'IVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTENDLLVRIGKHSRTRYERNIEKISMLEKIYIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKETWTANVGKGQPSVLQVVNLPIVERPVCKDSTRIRITDNMFCAGYKPDEGKRGDACEGDSGGPFVMKSPFNNRWYQMGIVSWGEGCDRDGKYGFYTHVFRLKKWIQKVIDQFGE'"] | Not Mentioned in Database |
null | RNA | ["'TMR3 (48-MER)'"] | ["'FH8'"] | ["'GGACGACUGAACCGAAAGGUUCUUGGCUGCUUCGGCAGAGGUACGUCC'"] | https://www.nakb.org/ | Small Molecule | 6GZK | ["'CN(C)c1ccc2c(c1)OC3=CC(=[N+](C)C)C=CC3=C2c4ccc(cc4C(=O)O)C(=O)O'"] | Not Mentioned in Database |
null | DNA | [" 'DNA (38-MER)'"] | ["'Reverse transcriptase p66'", " 'Reverse transcriptase p51'"] | [" 'TAATAACCCCCCTTCGGTGCTTTGCACCGAAGGGGGGT'"] | https://www.nakb.org/ | Protein | 6O9E | ["'PISPIETVPVKLKPGMDGPKVKQWPLTEEKIKALVEICTEMEKEGKISKIGPENPYNTPVFAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPLDEDFRKYTAFTIPSINNETPGIRYQYNVLPQGWKGSPAIFQSSMTKILEPFKKQNPDIVIYQYMDDLYVGSDLEIGQHRTKIEELRQHLLRWGLTTPDKKHQKEPPFLWMGYELHPDKWTVQPIVLPEKDSWTVNDIQKLVGKLNWASQIYPGIKVRQLSKLLRGTKALTEVIPLTEEAELELAENREILKEPVHGV... | Not Mentioned in Database |
null | DNA | [" 'DNA (38-MER)'"] | ["'Double homeobox protein 4'"] | [" 'GCTAATCTAATCAACCGCAGGTTGATTAGCCCATTAGC'"] | https://www.nakb.org/ | Protein | 6U82 | ["'GRGRRRRLVWTPSQSEALRACFERNPYPGIATRERLAQAIGIPEPRVQIWFQNERSRQLRQHRRESRPWPGRRGPPEGRRKRTAVTGSQTALLLRAFEKDRFPGIAAREELARETGLPESRIQIWFQNRRARHP'"] | Not Mentioned in Database |
null | RNA | ["'RNA (130-MER)'"] | [] | ["'GGCGAUAUGGCAUGGAAUCAGCUCAAGGAACUGUGAACGUAUAUCGGGCAACGACUAGGAAACUAGUCGUUGGGAAGAAACUGCCGAUAUACGGGAGUUCCUUGAGCGGGAGAUUCCAUGCCUAAGUCGC'"] | https://www.nakb.org/ | Small Molecule | 6WLJ | [] | Not Mentioned in Database |
null | DNA | ['"DNA (5\'-D(*GP*GP*GP*TP*GP*GP*GP*TP*TP*GP*GP*GP*AP*GP*GP*G)-3\')"'] | [] | ["'GGGTGGGTTGGGAGGG'"] | https://www.nakb.org/ | Small Molecule | 7E5P | [] | Not Mentioned in Database |
null | RNA | ["'Pepper (49-MER)'"] | ["'GTP'", " 'J8F'", " 'MG'", " 'IRI'"] | ["'GCGCACUGGCGCUGCGCCUUCGGGCGCCAAUCGUAGCGUGUCGGCGCC'"] | https://www.nakb.org/ | Small Molecule | 7EOG | ["'c1nc2c(n1C3C(C(C(O3)COP(=O)(O)OP(=O)(O)OP(=O)(O)O)O)O)N=C(NC2=O)N'", " 'CN(CCO)c1ccc(cc1)C=C(C#N)c2ccc(cc2)C#N'", " '[Mg+2]'", " '[NH3][Ir+3]([NH3])([NH3])([NH3])([NH3])[NH3]'"] | Not Mentioned in Database |
null | RNA | ["'Pepper (49-MER)'"] | ["'J8F'", " 'MG'"] | ["'GGCGCACUGGCGCUGCGCCUUCGGGCGCCAAUCGUAGCGUGUCGGCGCC'"] | https://www.nakb.org/ | Small Molecule | 7EOH | ["'CN(CCO)c1ccc(cc1)C=C(C#N)c2ccc(cc2)C#N'", " '[Mg+2]'"] | Not Mentioned in Database |
null | RNA | ["'Pepper (49-MER)'"] | ["'J8F'", " 'MN'", " 'MG'"] | ["'GGCGCACUGGCGCUGCGCCUUCGGGCGCCAAUCGUAGCGUGUCGGCGCC'"] | https://www.nakb.org/ | Small Molecule | 7EOI | ["'CN(CCO)c1ccc(cc1)C=C(C#N)c2ccc(cc2)C#N'", " '[Mn+2]'", " '[Mg+2]'"] | Not Mentioned in Database |
null | RNA | ["'Pepper (49-MER)'"] | ["'J8F'", " 'MG'", " 'CS'"] | ["'GGCGCACUGGCGCUGCGCCUUCGGGCGCCAAUCGUAGCGUGUCGGCGCC'"] | https://www.nakb.org/ | Small Molecule | 7EOJ | ["'CN(CCO)c1ccc(cc1)C=C(C#N)c2ccc(cc2)C#N'", " '[Mg+2]'", " '[Cs+]'"] | Not Mentioned in Database |
null | RNA | ["'Pepper (49-MER)'"] | ["'GTP'", " 'J8L'", " 'MG'"] | ["'GCGCACUGGCGCUGCGCCUUCGGGCGCCAAUCGUAGCGUGUCGGCGCC'"] | https://www.nakb.org/ | Small Molecule | 7EOK | ["'c1nc2c(n1C3C(C(C(O3)COP(=O)(O)OP(=O)(O)OP(=O)(O)O)O)O)N=C(NC2=O)N'", " 'CN(C)CCN(C)c1cnc(cn1)C=C(C#N)c2ccc(cc2)C#N'", " '[Mg+2]'"] | Not Mentioned in Database |
null | RNA | ["'Pepper (49-MER)'"] | ["'GTP'", " 'MG'", " 'J8O'"] | ["'GCGCACUGGCGCUGCGCCUUCGGGCGCCAAUCGUAGCGUGUCGGCGCC'"] | https://www.nakb.org/ | Small Molecule | 7EOL | ["'c1nc2c(n1C3C(C(C(O3)COP(=O)(O)OP(=O)(O)OP(=O)(O)O)O)O)N=C(NC2=O)N'", " '[Mg+2]'", " 'CN(CCO)c1cnc(cn1)C=C(C#N)c2ccc(cc2)C#N'"] | Not Mentioned in Database |
null | RNA | ["'Pepper (49-MER)'"] | ["'GTP'", " 'J8R'", " 'MG'"] | ["'GCGCACUGGCGCUGCGCCUUCGGGCGCCAAUCGUAGCGUGUCGGCGCC'"] | https://www.nakb.org/ | Small Molecule | 7EOM | ["'c1nc2c(n1C3C(C(C(O3)COP(=O)(O)OP(=O)(O)OP(=O)(O)O)O)O)N=C(NC2=O)N'", " 'CN(CCO)c1ccc(cn1)C=C(C#N)c2ccc(cc2)C#N'", " '[Mg+2]'"] | Not Mentioned in Database |
null | RNA | ["'Pepper (49-MER)'"] | ["'GTP'", " 'J8U'", " 'MG'"] | ["'GCGCACUGGCGCUGCGCCUUCGGGCGCCAAUCGUAGCGUGUCGGCGCC'"] | https://www.nakb.org/ | Small Molecule | 7EON | ["'c1nc2c(n1C3C(C(C(O3)COP(=O)(O)OP(=O)(O)OP(=O)(O)O)O)O)N=C(NC2=O)N'", " 'CN(C)CCN(C)c1ccc(cc1)C=C(C#N)c2ccc(cc2)C#N'", " '[Mg+2]'"] | Not Mentioned in Database |
null | RNA | ["'Pepper (49-MER)'"] | ["'GTP'", " 'J8X'", " 'MG'"] | ["'GCGCACUGGCGCUGCGCCUUCGGGCGCCAAUCGUAGCGUGUCGGCGCC'"] | https://www.nakb.org/ | Small Molecule | 7EOO | ["'c1nc2c(n1C3C(C(C(O3)COP(=O)(O)OP(=O)(O)OP(=O)(O)O)O)O)N=C(NC2=O)N'", " 'CN(CCO)c1ccc(cc1)C=C(C#N)c2nc3ccccc3o2'", " '[Mg+2]'"] | Not Mentioned in Database |
null | RNA | ["'Pepper (49-MER)'"] | ["'GTP'", " 'MG'", " 'J93'"] | ["'GCGCACUGGCGCUGCGCCUUCGGGCGCCAAUCGUAGCGUGUCGGCGCC'"] | https://www.nakb.org/ | Small Molecule | 7EOP | ["'c1nc2c(n1C3C(C(C(O3)COP(=O)(O)OP(=O)(O)OP(=O)(O)O)O)O)N=C(NC2=O)N'", " '[Mg+2]'", " 'CN(CCO)c1cc2c(s1)cc(s2)C=C(C#N)c3ccc(cc3)C#N'"] | Not Mentioned in Database |
null | DNA | [" 'BT-100'"] | ["'von Willebrand factor'"] | [" 'GCCAGGGACCUAAGACACAUGUCCCUGGCT'"] | https://www.nakb.org/ | Protein | 7F49 | ["'MEDISEPPLHDFYCSRLLDLVFLLDGSSRLSEAEFEVLKAFVVDMMERLRISQKWVRVAVVEYHDGSHAYIGLKDRKRPSELRRIASQVKYAGSQVASTSEVLKYTLFQIFSKIDRPEASRIALLLMASQEPQRMSRNFVRYVQGLKKKKVIVIPVGIGPHANLKQIRLIEKQAPENKAFVLSSVDELEQQRDEIVSYLCDLAPEAPPPT'"] | Not Mentioned in Database |
null | DNA | [" 'DNA (30-MER)'"] | ["'Complement factor B'"] | [" 'GCXGAGAAXAGAAGXAGGAGXAXGCXXGCT'"] | https://www.nakb.org/ | Protein | 7JTN | ["'MGSNLSPQLCLMPFILGLLSGGVTTTPWSLARPQGSCSLEGVEIKGGSFRLLQEGQALEYVCPSGFYPYPVQTRTCRSTGSWSTLKTQDQKTVRKAECRAIHCPRPHDFENGEYWPRSPYYNVSDEISFHCYDGYTLRGSANRTCQVNGRWSGQTAICDNGAGYCSNPGIPIGTRKVGSQYRLEDSVTYHCSRGLTLRGSQRRTCQEGGSWSGTEPSCQDSFMYDTPQEVAEAFLSSLTETIEGVDAEDGHGPGEQQKRKIVLDPSGSMNIYLVLDGSDSIGASNFTGAKKCLVNLIEKVASYGVKPRYGLVTYATY... | Not Mentioned in Database |
null | DNA | [" 'DNA (32-MER)'"] | ["'Complement factor B'"] | [" 'CGCXGAGAAXAGAAGXAGGAGXAXGCXXGCGT'"] | https://www.nakb.org/ | Protein | 7JTQ | ["'MGSNLSPQLCLMPFILGLLSGGVTTTPWSLARPQGSCSLEGVEIKGGSFRLLQEGQALEYVCPSGFYPYPVQTRTCRSTGSWSTLKTQDQKTVRKAECRAIHCPRPHDFENGEYWPRSPYYNVSDEISFHCYDGYTLRGSANRTCQVNGRWSGQTAICDNGAGYCSNPGIPIGTRKVGSQYRLEDSVTYHCSRGLTLRGSQRRTCQEGGSWSGTEPSCQDSFMYDTPQEVAEAFLSSLTETIEGVDAEDGHGPGEQQKRKIVLDPSGSMNIYLVLDGSDSIGASNFTGAKKCLVNLIEKVASYGVKPRYGLVTYATY... | Not Mentioned in Database |
null | RNA | ["'Squash RNA aptamer bound to DFHBI-1T with iridium (III) ions'"] | ["'2ZY'", " 'IRI'", " 'MG'"] | ["'GGGAAGAUACAAGGUGAGCCCAAUAAUAUGGUUUGGGUUAGGAUAGGAAGUAGAGCCUUAAACUCUCUAAGCGGUAUCUUCCC'"] | https://www.nakb.org/ | Small Molecule | 7KVT | ["'CC1=NC(=Cc2cc(c(c(c2)F)O)F)C(=O)N1CC(F)(F)F'", " '[NH3][Ir+3]([NH3])([NH3])([NH3])([NH3])[NH3]'", " '[Mg+2]'"] | Not Mentioned in Database |
null | RNA | ["'Squash RNA aptamer'"] | [" '2ZY'"] | ["'GGGAAGAUACAAGGUGAGCCCAAUAAUAUGGUUUGGGUUAGGAUAGGAAGUAGAGCCUUAAACUCUCUAAGCGGUAUCUUCCC'"] | https://www.nakb.org/ | Small Molecule | 7KVU | [" 'CC1=NC(=Cc2cc(c(c(c2)F)O)F)C(=O)N1CC(F)(F)F'"] | Not Mentioned in Database |
null | RNA | ["'Squash RNA aptamer bound to DFHO'"] | [" '747'"] | ["'GGGAAGAUACAAGGUGAGCCCAAUAAUAUGGUUUGGGUUAGGAUAGGAAGUAGAGCCUUAAACUCUCUAAGCGGUAUCUUCCC'"] | https://www.nakb.org/ | Small Molecule | 7KVV | [" 'CN1C(=NC(=Cc2cc(c(c(c2)F)O)F)C1=O)C=NO'"] | Not Mentioned in Database |
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