paragraph_index
int64
sec
string
p_has_citation
int64
cites
string
citeids
list
pmid
int64
cited_id
string
sentences
string
all_sent_cites
list
sent_len
int64
sentence_batch_index
int64
sent_has_citation
float64
qc_fail
bool
cited_sentence
string
cites_in_sentence
list
cln_sentence
string
is_cap
bool
is_alpha
bool
ends_wp
bool
cit_qc
bool
lgtm
bool
__index_level_0__
int64
2
DISCUSSION
1
4
[ "B4" ]
14,530,650
pmid-11316320
Among the cases described by Lee et al., ascites was uncommon, occurring in only two of the seven.
[ "4" ]
98
41,019
0
false
Among the cases described by Lee et al., ascites was uncommon, occurring in only two of the seven.
[]
Among the cases described by Lee et al., ascites was uncommon, occurring in only two of the seven.
true
true
true
true
true
7,070
2
DISCUSSION
1
4
[ "B4" ]
14,530,650
pmid-11316320
Ascites was, however, demonstrated at ultrasonography in all our patients.
[ "4" ]
74
41,020
0
false
Ascites was, however, demonstrated at ultrasonography in all our patients.
[]
Ascites was, however, demonstrated at ultrasonography in all our patients.
true
true
true
true
true
7,070
2
DISCUSSION
1
4
[ "B4" ]
14,530,650
pmid-11316320
In their report, color Doppler ultrasonography of SSTs revealed prominent vascularity in the peripheral portion and central intercystic spaces; power Doppler ultrasonography was not performed.
[ "4" ]
192
41,021
0
false
In their report, color Doppler ultrasonography of SSTs revealed prominent vascularity in the peripheral portion and central intercystic spaces; power Doppler ultrasonography was not performed.
[]
In their report, color Doppler ultrasonography of SSTs revealed prominent vascularity in the peripheral portion and central intercystic spaces; power Doppler ultrasonography was not performed.
true
true
true
true
true
7,070
2
DISCUSSION
1
4
[ "B4" ]
14,530,650
pmid-11316320
In one of our patients, however, this modality showed a peculiar finding: the so-called "spoke-wheel appearance" , i.e., peripherally located arc-shaped large vessels and multiple vertically oriented centripetal vascular flow.
[ "4" ]
226
41,022
0
false
In one of our patients, however, this modality showed a peculiar finding: the so-called "spoke-wheel appearance", i.e., peripherally located arc-shaped large vessels and multiple vertically oriented centripetal vascular flow.
[]
In one of our patients, however, this modality showed a peculiar finding: the so-called "spoke-wheel appearance", i.e., peripherally located arc-shaped large vessels and multiple vertically oriented centripetal vascular flow.
true
true
true
true
true
7,070
2
DISCUSSION
1
4
[ "B4" ]
14,530,650
pmid-11316320
We believe that because of its higher sensitivity to flow signals, power Doppler ultrasonography permits continuous delineation of vascular flow.
[ "4" ]
145
41,023
0
false
We believe that because of its higher sensitivity to flow signals, power Doppler ultrasonography permits continuous delineation of vascular flow.
[]
We believe that because of its higher sensitivity to flow signals, power Doppler ultrasonography permits continuous delineation of vascular flow.
true
true
true
true
true
7,070
3
DISCUSSION
1
1
[ "B1", "B2", "B5", "B8", "B2", "B5", "B8" ]
14,530,650
pmid-10433285|pmid-10460370|pmid-11242213|pmid-12432104|pmid-10460370|pmid-11242213|pmid-12432104
The T2-weighted MRI findings of SSTs are a round or oval-shaped mass with hyperintense cystic components, and a heterogeneous solid component of intermediate to high signal intensity (1, 2, 5, 8).
[ "1", "2", "5", "8", "2", "5", "8" ]
196
41,024
0
false
The T2-weighted MRI findings of SSTs are a round or oval-shaped mass with hyperintense cystic components, and a heterogeneous solid component of intermediate to high signal intensity.
[ "1, 2, 5, 8" ]
The T2-weighted MRI findings of SSTs are a round or oval-shaped mass with hyperintense cystic components, and a heterogeneous solid component of intermediate to high signal intensity.
true
true
true
true
true
7,071
3
DISCUSSION
1
1
[ "B1", "B2", "B5", "B8", "B2", "B5", "B8" ]
14,530,650
pmid-10433285|pmid-10460370|pmid-11242213|pmid-12432104|pmid-10460370|pmid-11242213|pmid-12432104
At dynamic contrast-enhanced imaging, early peripheral enhancement with centripetal progression has been reported (2, 5, 8).
[ "1", "2", "5", "8", "2", "5", "8" ]
124
41,025
0
false
At dynamic contrast-enhanced imaging, early peripheral enhancement with centripetal progression has been reported.
[ "2, 5, 8" ]
At dynamic contrast-enhanced imaging, early peripheral enhancement with centripetal progression has been reported.
true
true
true
true
true
7,071
4
DISCUSSION
1
1
[ "B1", "B2", "B1" ]
14,530,650
pmid-10433285|pmid-10460370|pmid-10433285
Microscopically, SSTs are characterized by a number of distinctive features: 1) a pseudolobular growth pattern, in which cellular areas are separated by edematous and collagenous hypocellular areas; 2) collagenous sclerosis within the cellular areas; 3) marked vascularity, with a "hemangiopericytomatous" pattern; and 4...
[ "1", "2", "1" ]
366
41,026
0
false
Microscopically, SSTs are characterized by a number of distinctive features: 1) a pseudolobular growth pattern, in which cellular areas are separated by edematous and collagenous hypocellular areas; 2) collagenous sclerosis within the cellular areas; 3) marked vascularity, with a "hemangiopericytomatous" pattern; and 4...
[ "1, 2" ]
Microscopically, SSTs are characterized by a number of distinctive features: 1) a pseudolobular growth pattern, in which cellular areas are separated by edematous and collagenous hypocellular areas; 2) collagenous sclerosis within the cellular areas; 3) marked vascularity, with a "hemangiopericytomatous" pattern; and 4...
true
true
true
true
true
7,072
4
DISCUSSION
1
1
[ "B1", "B2", "B1" ]
14,530,650
pmid-10433285|pmid-10460370|pmid-10433285
Except for this last-mentioned, our MR findings clearly reflected these pathologic features.
[ "1", "2", "1" ]
92
41,027
0
false
Except for this last-mentioned, our MR findings clearly reflected these pathologic features.
[]
Except for this last-mentioned, our MR findings clearly reflected these pathologic features.
true
true
true
true
true
7,072
4
DISCUSSION
1
1
[ "B1", "B2", "B1" ]
14,530,650
pmid-10433285|pmid-10460370|pmid-10433285
At T2-weighted imaging, pseudolobulation was represented by an admixture of hypointense lesions set against a background of hyperintense stroma; pronounced sclerosis within the cellular nodules correlated with the hypointense areas.
[ "1", "2", "1" ]
232
41,028
0
false
At T2-weighted imaging, pseudolobulation was represented by an admixture of hypointense lesions set against a background of hyperintense stroma; pronounced sclerosis within the cellular nodules correlated with the hypointense areas.
[]
At T2-weighted imaging, pseudolobulation was represented by an admixture of hypointense lesions set against a background of hyperintense stroma; pronounced sclerosis within the cellular nodules correlated with the hypointense areas.
true
true
true
true
true
7,072
4
DISCUSSION
1
1
[ "B1", "B2", "B1" ]
14,530,650
pmid-10433285|pmid-10460370|pmid-10433285
Prominent vascularity within cellular areas explained the marked and early tumoral enhancement we observed.
[ "1", "2", "1" ]
107
41,029
0
false
Prominent vascularity within cellular areas explained the marked and early tumoral enhancement we observed.
[]
Prominent vascularity within cellular areas explained the marked and early tumoral enhancement we observed.
true
true
true
true
true
7,072
4
DISCUSSION
1
1
[ "B1", "B2", "B1" ]
14,530,650
pmid-10433285|pmid-10460370|pmid-10433285
Pathologic specimens obtained from our patients showed that the cystic areas were small; in fact the areas of high signal intensity seen at T2-weighted imaging and the unenhanced areas observed at dynamic imaging correlated with areas of hypocellularity and edema, and the thick or thin peripheral rim corresponded to th...
[ "1", "2", "1" ]
360
41,030
0
false
Pathologic specimens obtained from our patients showed that the cystic areas were small; in fact the areas of high signal intensity seen at T2-weighted imaging and the unenhanced areas observed at dynamic imaging correlated with areas of hypocellularity and edema, and the thick or thin peripheral rim corresponded to th...
[]
Pathologic specimens obtained from our patients showed that the cystic areas were small; in fact the areas of high signal intensity seen at T2-weighted imaging and the unenhanced areas observed at dynamic imaging correlated with areas of hypocellularity and edema, and the thick or thin peripheral rim corresponded to th...
true
true
true
true
true
7,072
4
DISCUSSION
1
1
[ "B1", "B2", "B1" ]
14,530,650
pmid-10433285|pmid-10460370|pmid-10433285
In an earlier report, Ihara et al.
[ "1", "2", "1" ]
34
41,031
0
false
In an earlier report, Ihara et al.
[]
In an earlier report, Ihara et al.
true
true
true
true
true
7,072
4
DISCUSSION
1
1
[ "B1", "B2", "B1" ]
14,530,650
pmid-10433285|pmid-10460370|pmid-10433285
(1) concluded that the presence of a thick peripheral rim consisting of compressed ovarian stroma can help differentiate SSTs from other stromal tumors.
[ "1", "2", "1" ]
152
41,032
1
false
concluded that the presence of a thick peripheral rim consisting of compressed ovarian stroma can help differentiate SSTs from other stromal tumors.
[ "1" ]
concluded that the presence of a thick peripheral rim consisting of compressed ovarian stroma can help differentiate SSTs from other stromal tumors.
false
true
true
true
false
7,072
4
DISCUSSION
1
1
[ "B1", "B2", "B1" ]
14,530,650
pmid-10433285|pmid-10460370|pmid-10433285
SSTs, they claimed, have a thick peripheral rim for two reasons: first, they occur in younger women with large ovaries; second, the tumors are slow growing.
[ "1", "2", "1" ]
156
41,033
0
false
SSTs, they claimed, have a thick peripheral rim for two reasons: first, they occur in younger women with large ovaries; second, the tumors are slow growing.
[]
SSTs, they claimed, have a thick peripheral rim for two reasons: first, they occur in younger women with large ovaries; second, the tumors are slow growing.
true
true
true
true
true
7,072
4
DISCUSSION
1
1
[ "B1", "B2", "B1" ]
14,530,650
pmid-10433285|pmid-10460370|pmid-10433285
Fibromas and thecomas, on the other hand, are common in older women with atrophied ovarian stroma that are hardly visible, even if present at a tumor's periphery.
[ "1", "2", "1" ]
162
41,034
0
false
Fibromas and thecomas, on the other hand, are common in older women with atrophied ovarian stroma that are hardly visible, even if present at a tumor's periphery.
[]
Fibromas and thecomas, on the other hand, are common in older women with atrophied ovarian stroma that are hardly visible, even if present at a tumor's periphery.
true
true
true
true
true
7,072
4
DISCUSSION
1
1
[ "B1", "B2", "B1" ]
14,530,650
pmid-10433285|pmid-10460370|pmid-10433285
However, our report showed that the peripheral rim of SSTs varies in thickness, and may be very thin.
[ "1", "2", "1" ]
101
41,035
0
false
However, our report showed that the peripheral rim of SSTs varies in thickness, and may be very thin.
[]
However, our report showed that the peripheral rim of SSTs varies in thickness, and may be very thin.
true
true
true
true
true
7,072
4
DISCUSSION
1
1
[ "B1", "B2", "B1" ]
14,530,650
pmid-10433285|pmid-10460370|pmid-10433285
In one of our patients (case 3), the peripheral ovarian cortex contained three functional cysts.
[ "1", "2", "1" ]
96
41,036
0
false
In one of our patients (case 3), the peripheral ovarian cortex contained three functional cysts.
[]
In one of our patients (case 3), the peripheral ovarian cortex contained three functional cysts.
true
true
true
true
true
7,072
5
DISCUSSION
0
null
null
14,530,650
null
The differential diagnosis of SSTs should include thecoma/fibroma, metastases, and malignant epithelial ovarian tumors.
null
119
41,037
0
false
null
null
The differential diagnosis of SSTs should include thecoma/fibroma, metastases, and malignant epithelial ovarian tumors.
true
true
true
true
true
7,073
5
DISCUSSION
0
null
null
14,530,650
null
Fibromas/thecomas usually show low signal intensities at T2-weighted imaging, and slow and prolonged enhancement at dynamic MRI.
null
128
41,038
0
false
null
null
Fibromas/thecomas usually show low signal intensities at T2-weighted imaging, and slow and prolonged enhancement at dynamic MRI.
true
true
true
true
true
7,073
5
DISCUSSION
0
null
null
14,530,650
null
Ovarian metastases and malignant epithelial tumors usually occur in older patients, and dynamic MR imaging does not usually reveal progressive centripetal enhancement.
null
167
41,039
0
false
null
null
Ovarian metastases and malignant epithelial tumors usually occur in older patients, and dynamic MR imaging does not usually reveal progressive centripetal enhancement.
true
true
true
true
true
7,073
6
DISCUSSION
0
null
null
14,530,650
null
In summary, SSTs are mixed cystic and solid tumors with central round or cleft-like cysts and show quite specific imaging findings, especially at power Doppler ultrasonography and dynamic MRI.
null
192
41,040
0
false
null
null
In summary, SSTs are mixed cystic and solid tumors with central round or cleft-like cysts and show quite specific imaging findings, especially at power Doppler ultrasonography and dynamic MRI.
true
true
true
true
true
7,074
6
DISCUSSION
0
null
null
14,530,650
null
Findings of large peripherally located vessels and centripetal vascular flow ("spoke-wheel appearance") at power Doppler ultrasonography, and early peripheral enhancement with centripetal progression at dynamic MRI, are usual.
null
226
41,041
0
false
null
null
Findings of large peripherally located vessels and centripetal vascular flow ("spoke-wheel appearance") at power Doppler ultrasonography, and early peripheral enhancement with centripetal progression at dynamic MRI, are usual.
true
true
true
true
true
7,074
6
DISCUSSION
0
null
null
14,530,650
null
Acknowledgment of these specific findings of SSTs permits the accurate preoperative diagnosis of these benign tumors and promotes less invasive surgery (such as laparoscopic tumor excision) rather than oophorectomy.
null
215
41,042
0
false
null
null
Acknowledgment of these specific findings of SSTs permits the accurate preoperative diagnosis of these benign tumors and promotes less invasive surgery (such as laparoscopic tumor excision) rather than oophorectomy.
true
true
true
true
true
7,074
0
DISCUSSION
1
19
[ "ref19", "ref11", "ref12", "ref13", "ref11" ]
18,408,006
pmid-15304394|pmid-15845454|pmid-16174766|pmid-17339324|pmid-15845454
We describe here the first characterization of human CLEC9A and demonstrate that it functions as an activation receptor, capable of triggering intracellular signaling via Syk kinase.
[ "19", "11", "12", "13", "11" ]
182
41,043
0
false
We describe here the first characterization of human CLEC9A and demonstrate that it functions as an activation receptor, capable of triggering intracellular signaling via Syk kinase.
[]
We describe here the first characterization of human CLEC9A and demonstrate that it functions as an activation receptor, capable of triggering intracellular signaling via Syk kinase.
true
true
true
true
true
7,075
0
DISCUSSION
1
19
[ "ref19", "ref11", "ref12", "ref13", "ref11" ]
18,408,006
pmid-15304394|pmid-15845454|pmid-16174766|pmid-17339324|pmid-15845454
This interaction is mediated by the cytoplasmic tail of the CLEC9A that contains a single tyrosine-based (EXYXXL) sequence, which can be considered to be an ITAM-like motif (19).
[ "19", "11", "12", "13", "11" ]
178
41,044
1
false
This interaction is mediated by the cytoplasmic tail of the CLEC9A that contains a single tyrosine-based (EXYXXL) sequence, which can be considered to be an ITAM-like motif.
[ "19" ]
This interaction is mediated by the cytoplasmic tail of the CLEC9A that contains a single tyrosine-based (EXYXXL) sequence, which can be considered to be an ITAM-like motif.
true
true
true
true
true
7,075
0
DISCUSSION
1
11
[ "ref19", "ref11", "ref12", "ref13", "ref11" ]
18,408,006
pmid-15304394|pmid-15845454|pmid-16174766|pmid-17339324|pmid-15845454
These sequences were first identified in two other receptors of the Dectin-1 cluster, Dectin-1 itself (11), and more recently CLEC-2 (12).
[ "19", "11", "12", "13", "11" ]
138
41,045
1
false
These sequences were first identified in two other receptors of the Dectin-1 cluster, Dectin-1 itself, and more recently CLEC-2.
[ "11", "12" ]
These sequences were first identified in two other receptors of the Dectin-1 cluster, Dectin-1 itself, and more recently CLEC-2.
true
true
true
true
true
7,075
0
DISCUSSION
1
11
[ "ref19", "ref11", "ref12", "ref13", "ref11" ]
18,408,006
pmid-15304394|pmid-15845454|pmid-16174766|pmid-17339324|pmid-15845454
While the mechanism of Syk signaling via these motifs is unknown, it requires both SH2 domains of this kinase (13) and may occur via bridging of two receptor chains (11).
[ "19", "11", "12", "13", "11" ]
170
41,046
1
false
While the mechanism of Syk signaling via these motifs is unknown, it requires both SH2 domains of this kinase and may occur via bridging of two receptor chains.
[ "13", "11" ]
While the mechanism of Syk signaling via these motifs is unknown, it requires both SH2 domains of this kinase and may occur via bridging of two receptor chains.
true
true
true
true
true
7,075
1
DISCUSSION
1
30
[ "ref30", "ref27", "ref31", "ref31" ]
18,408,006
pmid-16862125|pmid-16341139|pmid-17450144|pmid-17450144
In myeloid cells, ITAM-like mediated signaling through Syk has largely been studied with Dectin-1.
[ "30", "27", "31", "31" ]
98
41,047
0
false
In myeloid cells, ITAM-like mediated signaling through Syk has largely been studied with Dectin-1.
[]
In myeloid cells, ITAM-like mediated signaling through Syk has largely been studied with Dectin-1.
true
true
true
true
true
7,076
1
DISCUSSION
1
30
[ "ref30", "ref27", "ref31", "ref31" ]
18,408,006
pmid-16862125|pmid-16341139|pmid-17450144|pmid-17450144
Signaling via this kinase occurs through a novel pathway involving CARD9 (30) and can induce a variety of cellular responses including the induction of cytokines (such as TNF, IL-6, IL-10, IL-23, and IL-2), the respiratory burst, and the production of arachidonic acid (27, 31).
[ "30", "27", "31", "31" ]
278
41,048
1
false
Signaling via this kinase occurs through a novel pathway involving CARD9 and can induce a variety of cellular responses including the induction of cytokines (such as TNF, IL-6, IL-10, IL-23, and IL-2), the respiratory burst, and the production of arachidonic acid.
[ "30", "27, 31" ]
Signaling via this kinase occurs through a novel pathway involving CARD9 and can induce a variety of cellular responses including the induction of cytokines, the respiratory burst, and the production of arachidonic acid.
true
true
true
true
true
7,076
1
DISCUSSION
1
31
[ "ref30", "ref27", "ref31", "ref31" ]
18,408,006
pmid-16862125|pmid-16341139|pmid-17450144|pmid-17450144
In addition, signaling via this pathway was recently shown to induce T-helper type 17 (TH17) adaptive responses in vivo (31).
[ "30", "27", "31", "31" ]
125
41,049
1
false
In addition, signaling via this pathway was recently shown to induce T-helper type 17 (TH17) adaptive responses in vivo.
[ "31" ]
In addition, signaling via this pathway was recently shown to induce T-helper type 17 adaptive responses in vivo.
true
true
true
true
true
7,076
1
DISCUSSION
1
30
[ "ref30", "ref27", "ref31", "ref31" ]
18,408,006
pmid-16862125|pmid-16341139|pmid-17450144|pmid-17450144
As CLEC9A can signal via this pathway, it is possible that this receptor may be able to induce many, if not all, of these responses, which may be influenced by its ability to dimerize.
[ "30", "27", "31", "31" ]
184
41,050
0
false
As CLEC9A can signal via this pathway, it is possible that this receptor may be able to induce many, if not all, of these responses, which may be influenced by its ability to dimerize.
[]
As CLEC9A can signal via this pathway, it is possible that this receptor may be able to induce many, if not all, of these responses, which may be influenced by its ability to dimerize.
true
true
true
true
true
7,076
2
DISCUSSION
1
19
[ "ref19", "ref32", "ref19", "ref33" ]
18,408,006
pmid-15304394|NA|pmid-15304394|pmid-15956283
The ITAM-like motif of Dectin-1 also mediates phagocytosis (19).
[ "19", "32", "19", "33" ]
64
41,051
1
false
The ITAM-like motif of Dectin-1 also mediates phagocytosis.
[ "19" ]
The ITAM-like motif of Dectin-1 also mediates phagocytosis.
true
true
true
true
true
7,077
2
DISCUSSION
1
19
[ "ref19", "ref32", "ref19", "ref33" ]
18,408,006
pmid-15304394|NA|pmid-15304394|pmid-15956283
Although we could demonstrate that CLEC9A could induce particle uptake in macrophages, it was unable to do so when expressed in NIH3T3 cells.
[ "19", "32", "19", "33" ]
141
41,052
0
false
Although we could demonstrate that CLEC9A could induce particle uptake in macrophages, it was unable to do so when expressed in NIH3T3 cells.
[]
Although we could demonstrate that CLEC9A could induce particle uptake in macrophages, it was unable to do so when expressed in NIH3T3 cells.
true
true
true
true
true
7,077
2
DISCUSSION
1
19
[ "ref19", "ref32", "ref19", "ref33" ]
18,408,006
pmid-15304394|NA|pmid-15304394|pmid-15956283
As the definition of a phagocytic receptor is its ability to confer phagocytic activity to normally non-phagocytic cell lines, we conclude that CLEC9A is not directly able to mediate particle uptake.
[ "19", "32", "19", "33" ]
199
41,053
0
false
As the definition of a phagocytic receptor is its ability to confer phagocytic activity to normally non-phagocytic cell lines, we conclude that CLEC9A is not directly able to mediate particle uptake.
[]
As the definition of a phagocytic receptor is its ability to confer phagocytic activity to normally non-phagocytic cell lines, we conclude that CLEC9A is not directly able to mediate particle uptake.
true
true
true
true
true
7,077
2
DISCUSSION
1
32
[ "ref19", "ref32", "ref19", "ref33" ]
18,408,006
pmid-15304394|NA|pmid-15304394|pmid-15956283
In the RAW264.7 macrophages, it is possible that the residual low levels of endogenous Dectin-1 were contributing to this process (32).
[ "19", "32", "19", "33" ]
135
41,054
1
false
In the RAW264.7 macrophages, it is possible that the residual low levels of endogenous Dectin-1 were contributing to this process.
[ "32" ]
In the RAW264.7 macrophages, it is possible that the residual low levels of endogenous Dectin-1 were contributing to this process.
true
true
true
true
true
7,077
2
DISCUSSION
1
19
[ "ref19", "ref32", "ref19", "ref33" ]
18,408,006
pmid-15304394|NA|pmid-15304394|pmid-15956283
In addition Dectin-1-mediated phagocytosis occurs through novel mechanisms (19), which are still undefined and requires additional tyrosine-proximal residues (33) that are absent in CLEC9A.
[ "19", "32", "19", "33" ]
189
41,055
1
false
In addition Dectin-1-mediated phagocytosis occurs through novel mechanisms, which are still undefined and requires additional tyrosine-proximal residues that are absent in CLEC9A.
[ "19", "33" ]
In addition Dectin-1-mediated phagocytosis occurs through novel mechanisms, which are still undefined and requires additional tyrosine-proximal residues that are absent in CLEC9A.
true
true
true
true
true
7,077
3
DISCUSSION
0
null
null
18,408,006
null
FIGURE 5.hCLEC9A is not a phagocytic receptor.
null
47
41,056
0
false
null
null
FIGURE 5.hCLEC9A is not a phagocytic receptor.
false
false
true
true
false
7,078
3
DISCUSSION
0
null
null
18,408,006
null
A, schematic representation of the chimeric Dectin-1/CLEC9A receptor.
null
69
41,057
0
false
null
null
A, schematic representation of the chimeric Dectin-1/CLEC9A receptor.
true
true
true
true
true
7,078
3
DISCUSSION
0
null
null
18,408,006
null
B, fluorometric quantitation of zymosan (zym) binding by the transduced RAW264.7 macrophages or NIH3T3 fibroblasts, in the presence or absence of soluble β-glucan (β-glu), as indicated.
null
185
41,058
0
false
null
null
B, fluorometric quantitation of zymosan (zym) binding by the transduced RAW264.7 macrophages or NIH3T3 fibroblasts, in the presence or absence of soluble β-glucan (β-glu), as indicated.
true
true
true
true
true
7,078
3
DISCUSSION
0
null
null
18,408,006
null
RFU, relative fluorescence units.
null
33
41,059
0
false
null
null
RFU, relative fluorescence units.
true
true
true
true
true
7,078
3
DISCUSSION
0
null
null
18,408,006
null
Shown are the mean ± S.D.
null
25
41,060
0
false
null
null
Shown are the mean ± S.D.
true
true
true
true
true
7,078
3
DISCUSSION
0
null
null
18,408,006
null
of one representative experiment of three.
null
42
41,061
0
false
null
null
of one representative experiment of three.
false
true
true
true
false
7,078
3
DISCUSSION
0
null
null
18,408,006
null
C, flow cytometric quantitation of zymosan uptake (black histograms) by the chimera or Dectin-1 expressing RAW264.7 macrophages or NIH3T3 fibroblasts, as indicated.
null
164
41,062
0
false
null
null
C, flow cytometric quantitation of zymosan uptake (black histograms) by the chimera or Dectin-1 expressing RAW264.7 macrophages or NIH3T3 fibroblasts, as indicated.
true
true
true
true
true
7,078
3
DISCUSSION
0
null
null
18,408,006
null
Cytochalasin D (gray-filled histograms) was used to inhibit actin polymerization and served as a control in this assay.
null
119
41,063
0
false
null
null
Cytochalasin D (gray-filled histograms) was used to inhibit actin polymerization and served as a control in this assay.
true
true
true
true
true
7,078
3
DISCUSSION
0
null
null
18,408,006
null
The histograms shown are representative of at least three independent experiments, and the bars indicate the percentage of cells with internalized particles.
null
157
41,064
0
false
null
null
The histograms shown are representative of at least three independent experiments, and the bars indicate the percentage of cells with internalized particles.
true
true
true
true
true
7,078
3
DISCUSSION
0
null
null
18,408,006
null
*, p < 0.05 versus control (Student's t test).
null
46
41,065
0
false
null
null
*, p < 0.05 versus control (Student's t test).
false
false
true
true
false
7,078
3
DISCUSSION
0
null
null
18,408,006
null
D, representative confocal images demonstrating FITC-zymosan (green) uptake in NIH3T3 fibroblasts transduced with Dectin-1, but not the chimeric receptor.
null
154
41,066
0
false
null
null
D, representative confocal images demonstrating FITC-zymosan (green) uptake in NIH3T3 fibroblasts transduced with Dectin-1, but not the chimeric receptor.
true
true
true
true
true
7,078
3
DISCUSSION
0
null
null
18,408,006
null
Actin was stained with TRITC-phallodin, and is shown in red.
null
60
41,067
0
false
null
null
Actin was stained with TRITC-phallodin, and is shown in red.
true
true
true
true
true
7,078
4
DISCUSSION
0
null
null
18,408,006
null
hCLEC9A is not a phagocytic receptor.
null
37
41,068
0
false
null
null
hCLEC9A is not a phagocytic receptor.
false
true
true
true
false
7,079
4
DISCUSSION
0
null
null
18,408,006
null
A, schematic representation of the chimeric Dectin-1/CLEC9A receptor.
null
69
41,069
0
false
null
null
A, schematic representation of the chimeric Dectin-1/CLEC9A receptor.
true
true
true
true
true
7,079
4
DISCUSSION
0
null
null
18,408,006
null
B, fluorometric quantitation of zymosan (zym) binding by the transduced RAW264.7 macrophages or NIH3T3 fibroblasts, in the presence or absence of soluble β-glucan (β-glu), as indicated.
null
185
41,070
0
false
null
null
B, fluorometric quantitation of zymosan (zym) binding by the transduced RAW264.7 macrophages or NIH3T3 fibroblasts, in the presence or absence of soluble β-glucan (β-glu), as indicated.
true
true
true
true
true
7,079
4
DISCUSSION
0
null
null
18,408,006
null
RFU, relative fluorescence units.
null
33
41,071
0
false
null
null
RFU, relative fluorescence units.
true
true
true
true
true
7,079
4
DISCUSSION
0
null
null
18,408,006
null
Shown are the mean ± S.D.
null
25
41,072
0
false
null
null
Shown are the mean ± S.D.
true
true
true
true
true
7,079
4
DISCUSSION
0
null
null
18,408,006
null
of one representative experiment of three.
null
42
41,073
0
false
null
null
of one representative experiment of three.
false
true
true
true
false
7,079
4
DISCUSSION
0
null
null
18,408,006
null
C, flow cytometric quantitation of zymosan uptake (black histograms) by the chimera or Dectin-1 expressing RAW264.7 macrophages or NIH3T3 fibroblasts, as indicated.
null
164
41,074
0
false
null
null
C, flow cytometric quantitation of zymosan uptake (black histograms) by the chimera or Dectin-1 expressing RAW264.7 macrophages or NIH3T3 fibroblasts, as indicated.
true
true
true
true
true
7,079
4
DISCUSSION
0
null
null
18,408,006
null
Cytochalasin D (gray-filled histograms) was used to inhibit actin polymerization and served as a control in this assay.
null
119
41,075
0
false
null
null
Cytochalasin D (gray-filled histograms) was used to inhibit actin polymerization and served as a control in this assay.
true
true
true
true
true
7,079
4
DISCUSSION
0
null
null
18,408,006
null
The histograms shown are representative of at least three independent experiments, and the bars indicate the percentage of cells with internalized particles.
null
157
41,076
0
false
null
null
The histograms shown are representative of at least three independent experiments, and the bars indicate the percentage of cells with internalized particles.
true
true
true
true
true
7,079
4
DISCUSSION
0
null
null
18,408,006
null
*, p < 0.05 versus control (Student's t test).
null
46
41,077
0
false
null
null
*, p < 0.05 versus control (Student's t test).
false
false
true
true
false
7,079
4
DISCUSSION
0
null
null
18,408,006
null
D, representative confocal images demonstrating FITC-zymosan (green) uptake in NIH3T3 fibroblasts transduced with Dectin-1, but not the chimeric receptor.
null
154
41,078
0
false
null
null
D, representative confocal images demonstrating FITC-zymosan (green) uptake in NIH3T3 fibroblasts transduced with Dectin-1, but not the chimeric receptor.
true
true
true
true
true
7,079
4
DISCUSSION
0
null
null
18,408,006
null
Actin was stained with TRITC-phallodin, and is shown in red.
null
60
41,079
0
false
null
null
Actin was stained with TRITC-phallodin, and is shown in red.
true
true
true
true
true
7,079
5
DISCUSSION
0
null
null
18,408,006
null
FIGURE 6.hCLEC9A can induce pro-inflammatory cytokine production and can recruit and signal via Syk kinase.
null
108
41,080
0
false
null
null
FIGURE 6.hCLEC9A can induce pro-inflammatory cytokine production and can recruit and signal via Syk kinase.
false
false
true
true
false
7,080
5
DISCUSSION
0
null
null
18,408,006
null
A, quantitation of zymosan (zym) induced TNF production by transduced RAW264.7 macrophages, in the presence or absence of soluble β-glucan (β-glu), as indicated, demonstrating the ability of the chimeric receptor to induce proinflammatory cytokine production.
null
259
41,081
0
false
null
null
A, quantitation of zymosan (zym) induced TNF production by transduced RAW264.7 macrophages, in the presence or absence of soluble β-glucan (β-glu), as indicated, demonstrating the ability of the chimeric receptor to induce proinflammatory cytokine production.
true
true
true
true
true
7,080
5
DISCUSSION
0
null
null
18,408,006
null
Shown are the mean ± S.D.
null
25
41,082
0
false
null
null
Shown are the mean ± S.D.
true
true
true
true
true
7,080
5
DISCUSSION
0
null
null
18,408,006
null
of one representative experiment of three.
null
42
41,083
0
false
null
null
of one representative experiment of three.
false
true
true
true
false
7,080
5
DISCUSSION
0
null
null
18,408,006
null
B, Western blotting of immunoprecipitates using phosphorylated (pY) and unphosphorylated peptides (Y) corresponding to the cytoplasmic tail of hCLEC9A or Dectin-1 from RAW264.7 cell lysates.
null
190
41,084
0
false
null
null
B, Western blotting of immunoprecipitates using phosphorylated (pY) and unphosphorylated peptides (Y) corresponding to the cytoplasmic tail of hCLEC9A or Dectin-1 from RAW264.7 cell lysates.
true
true
true
true
true
7,080
5
DISCUSSION
0
null
null
18,408,006
null
Blots were probed with anti-phosphotyrosine (αPY), anti-Syk, and anti-Lyn, as indicated.
null
88
41,085
0
false
null
null
Blots were probed with anti-phosphotyrosine (αPY), anti-Syk, and anti-Lyn, as indicated.
true
true
true
true
true
7,080
5
DISCUSSION
0
null
null
18,408,006
null
C, IL-2 production following zymosan stimulation of Syk-deficient (Syk-) and Syk-sufficient (Syk+) cells, transduced with the chimeric receptor or vector-only control, as indicated, showing that cytokine production induced by the chimeric receptor in response to zymosan requires Syk.
null
284
41,086
0
false
null
null
C, IL-2 production following zymosan stimulation of Syk-deficient (Syk-) and Syk-sufficient (Syk+) cells, transduced with the chimeric receptor or vector-only control, as indicated, showing that cytokine production induced by the chimeric receptor in response to zymosan requires Syk.
true
true
true
true
true
7,080
5
DISCUSSION
0
null
null
18,408,006
null
The data shown are the mean ± S.D.
null
34
41,087
0
false
null
null
The data shown are the mean ± S.D.
true
true
true
true
true
7,080
5
DISCUSSION
0
null
null
18,408,006
null
and are representative of three independent experiments.
null
56
41,088
0
false
null
null
and are representative of three independent experiments.
false
true
true
true
false
7,080
5
DISCUSSION
0
null
null
18,408,006
null
*, p < 0.05 versus control (Student's t test).
null
46
41,089
0
false
null
null
*, p < 0.05 versus control (Student's t test).
false
false
true
true
false
7,080
6
DISCUSSION
0
null
null
18,408,006
null
hCLEC9A can induce pro-inflammatory cytokine production and can recruit and signal via Syk kinase.
null
98
41,090
0
false
null
null
hCLEC9A can induce pro-inflammatory cytokine production and can recruit and signal via Syk kinase.
false
true
true
true
false
7,081
6
DISCUSSION
0
null
null
18,408,006
null
A, quantitation of zymosan (zym) induced TNF production by transduced RAW264.7 macrophages, in the presence or absence of soluble β-glucan (β-glu), as indicated, demonstrating the ability of the chimeric receptor to induce proinflammatory cytokine production.
null
259
41,091
0
false
null
null
A, quantitation of zymosan (zym) induced TNF production by transduced RAW264.7 macrophages, in the presence or absence of soluble β-glucan (β-glu), as indicated, demonstrating the ability of the chimeric receptor to induce proinflammatory cytokine production.
true
true
true
true
true
7,081
6
DISCUSSION
0
null
null
18,408,006
null
Shown are the mean ± S.D.
null
25
41,092
0
false
null
null
Shown are the mean ± S.D.
true
true
true
true
true
7,081
6
DISCUSSION
0
null
null
18,408,006
null
of one representative experiment of three.
null
42
41,093
0
false
null
null
of one representative experiment of three.
false
true
true
true
false
7,081
6
DISCUSSION
0
null
null
18,408,006
null
B, Western blotting of immunoprecipitates using phosphorylated (pY) and unphosphorylated peptides (Y) corresponding to the cytoplasmic tail of hCLEC9A or Dectin-1 from RAW264.7 cell lysates.
null
190
41,094
0
false
null
null
B, Western blotting of immunoprecipitates using phosphorylated (pY) and unphosphorylated peptides (Y) corresponding to the cytoplasmic tail of hCLEC9A or Dectin-1 from RAW264.7 cell lysates.
true
true
true
true
true
7,081
6
DISCUSSION
0
null
null
18,408,006
null
Blots were probed with anti-phosphotyrosine (αPY), anti-Syk, and anti-Lyn, as indicated.
null
88
41,095
0
false
null
null
Blots were probed with anti-phosphotyrosine (αPY), anti-Syk, and anti-Lyn, as indicated.
true
true
true
true
true
7,081
6
DISCUSSION
0
null
null
18,408,006
null
C, IL-2 production following zymosan stimulation of Syk-deficient (Syk-) and Syk-sufficient (Syk+) cells, transduced with the chimeric receptor or vector-only control, as indicated, showing that cytokine production induced by the chimeric receptor in response to zymosan requires Syk.
null
284
41,096
0
false
null
null
C, IL-2 production following zymosan stimulation of Syk-deficient (Syk-) and Syk-sufficient (Syk+) cells, transduced with the chimeric receptor or vector-only control, as indicated, showing that cytokine production induced by the chimeric receptor in response to zymosan requires Syk.
true
true
true
true
true
7,081
6
DISCUSSION
0
null
null
18,408,006
null
The data shown are the mean ± S.D.
null
34
41,097
0
false
null
null
The data shown are the mean ± S.D.
true
true
true
true
true
7,081
6
DISCUSSION
0
null
null
18,408,006
null
and are representative of three independent experiments.
null
56
41,098
0
false
null
null
and are representative of three independent experiments.
false
true
true
true
false
7,081
6
DISCUSSION
0
null
null
18,408,006
null
*, p < 0.05 versus control (Student's t test).
null
46
41,099
0
false
null
null
*, p < 0.05 versus control (Student's t test).
false
false
true
true
false
7,081
7
DISCUSSION
1
34
[ "ref34", "ref34", "ref36", "ref37", "ref38" ]
18,408,006
pmid-17646733|pmid-17646733|pmid-17332250|pmid-12871640|pmid-2478233
The functional characterization of CLEC9A on primary cells was limited by its expression on extremely rare populations of peripheral blood leukocytes.
[ "34", "34", "36", "37", "38" ]
150
41,100
0
false
The functional characterization of CLEC9A on primary cells was limited by its expression on extremely rare populations of peripheral blood leukocytes.
[]
The functional characterization of CLEC9A on primary cells was limited by its expression on extremely rare populations of peripheral blood leukocytes.
true
true
true
true
true
7,082
7
DISCUSSION
1
34
[ "ref34", "ref34", "ref36", "ref37", "ref38" ]
18,408,006
pmid-17646733|pmid-17646733|pmid-17332250|pmid-12871640|pmid-2478233
The receptor is predominantly expressed by BDCA3+ DCs, which represent less than 0.05% of PBMC (34).
[ "34", "34", "36", "37", "38" ]
100
41,101
1
false
The receptor is predominantly expressed by BDCA3+ DCs, which represent less than 0.05% of PBMC.
[ "34" ]
The receptor is predominantly expressed by BDCA3+ DCs, which represent less than 0.05% of PBMC.
true
true
true
true
true
7,082
7
DISCUSSION
1
34
[ "ref34", "ref34", "ref36", "ref37", "ref38" ]
18,408,006
pmid-17646733|pmid-17646733|pmid-17332250|pmid-12871640|pmid-2478233
Very little is known about this cell type, but they are thought to be immature precursors of interstitial DCs, and were recently shown to express multiple Toll-like receptors (34–36).
[ "34", "34", "36", "37", "38" ]
183
41,102
0
false
Very little is known about this cell type, but they are thought to be immature precursors of interstitial DCs, and were recently shown to express multiple Toll-like receptors.
[ "34–36" ]
Very little is known about this cell type, but they are thought to be immature precursors of interstitial DCs, and were recently shown to express multiple Toll-like receptors.
true
true
true
true
true
7,082
7
DISCUSSION
1
34
[ "ref34", "ref34", "ref36", "ref37", "ref38" ]
18,408,006
pmid-17646733|pmid-17646733|pmid-17332250|pmid-12871640|pmid-2478233
CLEC9A is also expressed on small subsets of CD14+CD16- monocytes and on CD64+CD11b+ CD14- cells we were unable to identify further.
[ "34", "34", "36", "37", "38" ]
132
41,103
0
false
CLEC9A is also expressed on small subsets of CD14+CD16- monocytes and on CD64+CD11b+ CD14- cells we were unable to identify further.
[]
CLEC9A is also expressed on small subsets of CD14+CD16- monocytes and on CD64+CD11b+ CD14- cells we were unable to identify further.
true
true
true
true
true
7,082
7
DISCUSSION
1
34
[ "ref34", "ref34", "ref36", "ref37", "ref38" ]
18,408,006
pmid-17646733|pmid-17646733|pmid-17332250|pmid-12871640|pmid-2478233
CD14+CD16- monocytes, the so called “inflammatory monocytes,” normally constitute around 14% of the PBMC and are thought to migrate to sites of inflammation where they can differentiate into dendritic cells (37, 38).
[ "34", "34", "36", "37", "38" ]
216
41,104
0
false
CD14+CD16- monocytes, the so called “inflammatory monocytes,” normally constitute around 14% of the PBMC and are thought to migrate to sites of inflammation where they can differentiate into dendritic cells.
[ "37, 38" ]
CD14+CD16- monocytes, the so called “inflammatory monocytes,” normally constitute around 14% of the PBMC and are thought to migrate to sites of inflammation where they can differentiate into dendritic cells.
true
true
true
true
true
7,082
7
DISCUSSION
1
34
[ "ref34", "ref34", "ref36", "ref37", "ref38" ]
18,408,006
pmid-17646733|pmid-17646733|pmid-17332250|pmid-12871640|pmid-2478233
The expression of CLEC9A on a minor subset of these cells is suggestive of further differentiation of this monocyte population, and this receptor could potentially be used as a marker to characterize this subset in future analyses.
[ "34", "34", "36", "37", "38" ]
231
41,105
0
false
The expression of CLEC9A on a minor subset of these cells is suggestive of further differentiation of this monocyte population, and this receptor could potentially be used as a marker to characterize this subset in future analyses.
[]
The expression of CLEC9A on a minor subset of these cells is suggestive of further differentiation of this monocyte population, and this receptor could potentially be used as a marker to characterize this subset in future analyses.
true
true
true
true
true
7,082
8
DISCUSSION
1
39
[ "ref39" ]
18,408,006
pmid-16887988
Although the ligand and physiological role of CLEC9A is unknown, its limited expression on peripheral blood leukocytes suggests that it is unlikely to function as a pattern recognition receptor.
[ "39" ]
194
41,106
0
false
Although the ligand and physiological role of CLEC9A is unknown, its limited expression on peripheral blood leukocytes suggests that it is unlikely to function as a pattern recognition receptor.
[]
Although the ligand and physiological role of CLEC9A is unknown, its limited expression on peripheral blood leukocytes suggests that it is unlikely to function as a pattern recognition receptor.
true
true
true
true
true
7,083
8
DISCUSSION
1
39
[ "ref39" ]
18,408,006
pmid-16887988
However, the high levels of expression in the thymus and spleen, as determined by RT-PCR analysis (Fig.
[ "39" ]
103
41,107
0
false
However, the high levels of expression in the thymus and spleen, as determined by RT-PCR analysis (Fig.
[]
However, the high levels of expression in the thymus and spleen, as determined by RT-PCR analysis (Fig.
true
true
true
true
true
7,083
8
DISCUSSION
1
39
[ "ref39" ]
18,408,006
pmid-16887988
2), are suggestive of a role in immunity.
[ "39" ]
41
41,108
0
false
2), are suggestive of a role in immunity.
[]
2), are suggestive of a role in immunity.
false
false
true
true
false
7,083
8
DISCUSSION
1
39
[ "ref39" ]
18,408,006
pmid-16887988
Furthermore, as an endocytic receptor, CLEC9A may facilitate antigen uptake and presentation, and may provide a suitable target for antibody-mediated antigen delivery, as has been demonstrated for a variety of other C-type lectins, including Dectin-1 (39).
[ "39" ]
256
41,109
1
false
Furthermore, as an endocytic receptor, CLEC9A may facilitate antigen uptake and presentation, and may provide a suitable target for antibody-mediated antigen delivery, as has been demonstrated for a variety of other C-type lectins, including Dectin-1.
[ "39" ]
Furthermore, as an endocytic receptor, CLEC9A may facilitate antigen uptake and presentation, and may provide a suitable target for antibody-mediated antigen delivery, as has been demonstrated for a variety of other C-type lectins, including Dectin-1.
true
true
true
true
true
7,083
9
DISCUSSION
1
20
[ "ref20" ]
18,408,006
pmid-16492762
Despite being conserved between species (20), the murine CLEC9A orthologue appears to be structurally dissimilar to human CLEC9A.
[ "20" ]
129
41,110
1
false
Despite being conserved between species, the murine CLEC9A orthologue appears to be structurally dissimilar to human CLEC9A.
[ "20" ]
Despite being conserved between species, the murine CLEC9A orthologue appears to be structurally dissimilar to human CLEC9A.
true
true
true
true
true
7,084
9
DISCUSSION
1
20
[ "ref20" ]
18,408,006
pmid-16492762
Murine, but not human, receptor is alternatively spliced into a number isoforms.
[ "20" ]
80
41,111
0
false
Murine, but not human, receptor is alternatively spliced into a number isoforms.
[]
Murine, but not human, receptor is alternatively spliced into a number isoforms.
true
true
true
true
true
7,084
9
DISCUSSION
1
20
[ "ref20" ]
18,408,006
pmid-16492762
Furthermore, murine CLEC9A is not glycosylated nor does the receptor dimerize.
[ "20" ]
78
41,112
0
false
Furthermore, murine CLEC9A is not glycosylated nor does the receptor dimerize.
[]
Furthermore, murine CLEC9A is not glycosylated nor does the receptor dimerize.
true
true
true
true
true
7,084
9
DISCUSSION
1
20
[ "ref20" ]
18,408,006
pmid-16492762
While the significance of these differences is unclear, they may reflect some degree of functional divergence of this molecule between the various species.
[ "20" ]
155
41,113
0
false
While the significance of these differences is unclear, they may reflect some degree of functional divergence of this molecule between the various species.
[]
While the significance of these differences is unclear, they may reflect some degree of functional divergence of this molecule between the various species.
true
true
true
true
true
7,084
9
DISCUSSION
1
20
[ "ref20" ]
18,408,006
pmid-16492762
However, given the rarity of cells expressing this receptor in human blood, it may still be practical for further study of this receptor to be performed in mice.
[ "20" ]
161
41,114
0
false
However, given the rarity of cells expressing this receptor in human blood, it may still be practical for further study of this receptor to be performed in mice.
[]
However, given the rarity of cells expressing this receptor in human blood, it may still be practical for further study of this receptor to be performed in mice.
true
true
true
true
true
7,084
0
DISCUSSION
0
null
null
18,701,462
null
In the present study, we have identified and functionally characterized a new dimerization domain in the N-terminal cytosolic region of PC2.
null
141
41,115
0
false
null
null
In the present study, we have identified and functionally characterized a new dimerization domain in the N-terminal cytosolic region of PC2.
true
true
true
true
true
7,085
0
DISCUSSION
0
null
null
18,701,462
null
This domain is shown to have a physiologically relevant role in zebrafish development as it phenocopied known loss-of-function constructs of PC2.
null
147
41,116
0
false
null
null
This domain is shown to have a physiologically relevant role in zebrafish development as it phenocopied known loss-of-function constructs of PC2.
true
true
true
true
true
7,085
0
DISCUSSION
0
null
null
18,701,462
null
We propose that the identification of this domain has important implications in type 2 ADPKD pathophysiology.
null
111
41,117
0
false
null
null
We propose that the identification of this domain has important implications in type 2 ADPKD pathophysiology.
true
true
true
true
true
7,085
1
DISCUSSION
1
27
[ "ref27" ]
18,701,462
pmid-16943309
The tendency of native PC2 to oligomerize led us initially to investigate how PC2 homodimerization could be regulated.
[ "27" ]
119
41,118
0
false
The tendency of native PC2 to oligomerize led us initially to investigate how PC2 homodimerization could be regulated.
[]
The tendency of native PC2 to oligomerize led us initially to investigate how PC2 homodimerization could be regulated.
true
true
true
true
true
7,086