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12,201
A deep generative model for single-cell RNA sequencing with application to detecting differentially expressed genes
cs.LG
We propose a probabilistic model for interpreting gene expression levels that are observed through single-cell RNA sequencing. In the model, each cell has a low-dimensional latent representation. Additional latent variables account for technical effects that may erroneously set some observations of gene expression leve...
computer science
12,202
A simple data discretizer
cs.LG
Data discretization is an important step in the process of machine learning, since it is easier for classifiers to deal with discrete attributes rather than continuous attributes. Over the years, several methods of performing discretization such as Boolean Reasoning, Equal Frequency Binning, Entropy have been proposed,...
computer science
12,203
When Point Process Meets RNNs: Predicting Fine-Grained User Interests with Mutual Behavioral Infectivity
cs.LG
Predicting fine-grained interests of users with temporal behavior is important to personalization and information filtering applications. However, existing interest prediction methods are incapable of capturing the subtle degreed user interests towards particular items, and the internal time-varying drifting attention ...
computer science
12,204
Accelerated Block Coordinate Proximal Gradients with Applications in High Dimensional Statistics
math.OC
Nonconvex optimization problems arise in different research fields and arouse lots of attention in signal processing, statistics and machine learning. In this work, we explore the accelerated proximal gradient method and some of its variants which have been shown to converge under nonconvex context recently. We show th...
computer science
12,205
The Scaling Limit of High-Dimensional Online Independent Component Analysis
cs.LG
We analyze the dynamics of an online algorithm for independent component analysis in the high-dimensional scaling limit. As the ambient dimension tends to infinity, and with proper time scaling, we show that the time-varying joint empirical measure of the target feature vector and the estimates provided by the algorith...
computer science
12,206
NeuralPower: Predict and Deploy Energy-Efficient Convolutional Neural Networks
cs.LG
"How much energy is consumed for an inference made by a convolutional neural network (CNN)?" With the increased popularity of CNNs deployed on the wide-spectrum of platforms (from mobile devices to workstations), the answer to this question has drawn significant attention. From lengthening battery life of mobile device...
computer science
12,207
On the Hardness of Inventory Management with Censored Demand Data
cs.LG
We consider a repeated newsvendor problem where the inventory manager has no prior information about the demand, and can access only censored/sales data. In analogy to multi-armed bandit problems, the manager needs to simultaneously "explore" and "exploit" with her inventory decisions, in order to minimize the cumulati...
computer science
12,208
Spectral Algorithms for Computing Fair Support Vector Machines
cs.LG
Classifiers and rating scores are prone to implicitly codifying biases, which may be present in the training data, against protected classes (i.e., age, gender, or race). So it is important to understand how to design classifiers and scores that prevent discrimination in predictions. This paper develops computationally...
computer science
12,209
A Correspondence Between Random Neural Networks and Statistical Field Theory
stat.ML
A number of recent papers have provided evidence that practical design questions about neural networks may be tackled theoretically by studying the behavior of random networks. However, until now the tools available for analyzing random neural networks have been relatively ad-hoc. In this work, we show that the distrib...
computer science
12,210
Learning Social Image Embedding with Deep Multimodal Attention Networks
cs.MM
Learning social media data embedding by deep models has attracted extensive research interest as well as boomed a lot of applications, such as link prediction, classification, and cross-modal search. However, for social images which contain both link information and multimodal contents (e.g., text description, and visu...
computer science
12,211
A complete characterization of optimal dictionaries for least squares representation
math.OC
Dictionaries are collections of vectors used for representations of elements in Euclidean spaces. While recent research on optimal dictionaries is focussed on providing sparse (i.e., $\ell_0$-optimal,) representations, here we consider the problem of finding optimal dictionaries such that representations of samples of ...
computer science
12,212
Phase Transitions in the Pooled Data Problem
stat.ML
In this paper, we study the pooled data problem of identifying the labels associated with a large collection of items, based on a sequence of pooled tests revealing the counts of each label within the pool. In the noiseless setting, we identify an exact asymptotic threshold on the required number of tests with optimal ...
computer science
12,213
A Bayesian Nonparametric Method for Clustering Imputation, and Forecasting in Multivariate Time Series
stat.ME
This article proposes a Bayesian nonparametric method for forecasting, imputation, and clustering in sparsely observed, multivariate time series. The method is appropriate for jointly modeling hundreds of time series with widely varying, non-stationary dynamics. Given a collection of $N$ time series, the Bayesian model...
computer science
12,214
Characterization of Gradient Dominance and Regularity Conditions for Neural Networks
stat.ML
The past decade has witnessed a successful application of deep learning to solving many challenging problems in machine learning and artificial intelligence. However, the loss functions of deep neural networks (especially nonlinear networks) are still far from being well understood from a theoretical aspect. In this pa...
computer science
12,215
Asynchronous Decentralized Parallel Stochastic Gradient Descent
math.OC
Most commonly used distributed machine learning systems are either synchronous or centralized asynchronous. Synchronous algorithms like AllReduce-SGD perform poorly in a heterogeneous environment, while asynchronous algorithms using a parameter server suffer from 1) communication bottleneck at parameter servers when wo...
computer science
12,216
Visual Integration of Data and Model Space in Ensemble Learning
cs.HC
Ensembles of classifier models typically deliver superior performance and can outperform single classifier models given a dataset and classification task at hand. However, the gain in performance comes together with the lack in comprehensibility, posing a challenge to understand how each model affects the classificatio...
computer science
12,217
Ligand Pose Optimization with Atomic Grid-Based Convolutional Neural Networks
stat.ML
Docking is an important tool in computational drug discovery that aims to predict the binding pose of a ligand to a target protein through a combination of pose scoring and optimization. A scoring function that is differentiable with respect to atom positions can be used for both scoring and gradient-based optimization...
computer science
12,218
First-order Methods Almost Always Avoid Saddle Points
stat.ML
We establish that first-order methods avoid saddle points for almost all initializations. Our results apply to a wide variety of first-order methods, including gradient descent, block coordinate descent, mirror descent and variants thereof. The connecting thread is that such algorithms can be studied from a dynamical s...
computer science
12,219
Tracking the gradients using the Hessian: A new look at variance reducing stochastic methods
math.OC
Our goal is to improve variance reducing stochastic methods through better control variates. We first propose a modification of SVRG which uses the Hessian to track gradients over time, rather than to recondition, increasing the correlation of the control variates and leading to faster theoretical convergence close to ...
computer science
12,220
On the Consistency of Graph-based Bayesian Learning and the Scalability of Sampling Algorithms
stat.ML
A popular approach to semi-supervised learning proceeds by endowing the input data with a graph structure in order to extract geometric information and incorporate it into a Bayesian framework. We introduce new theory that gives appropriate scalings of graph parameters that provably lead to a well-defined limiting post...
computer science
12,221
Stochastic Backward Euler: An Implicit Gradient Descent Algorithm for $k$-means Clustering
math.OC
In this paper, we propose an implicit gradient descent algorithm for the classic $k$-means problem. The implicit gradient step or backward Euler is solved via stochastic fixed-point iteration, in which we randomly sample a mini-batch gradient in every iteration. It is the average of the fixed-point trajectory that is c...
computer science
12,222
A Novel Bayesian Cluster Enumeration Criterion for Unsupervised Learning
math.ST
We derive a new Bayesian Information Criterion (BIC) from first principles by formulating the problem of estimating the number of clusters in an observed data set as maximization of the posterior probability of the candidate models. Given that some mild assumptions are satisfied, we provide a general BIC expression for...
computer science
12,223
Smart "Predict, then Optimize"
math.OC
Many real-world analytics problems involve two significant challenges: prediction and optimization. Due to the typically complex nature of each challenge, the standard paradigm is to predict, then optimize. By and large, machine learning tools are intended to minimize prediction error and do not account for how the pre...
computer science
12,224
Sequential Matrix Completion
cs.IR
We propose a novel algorithm for sequential matrix completion in a recommender system setting, where the $(i,j)$th entry of the matrix corresponds to a user $i$'s rating of product $j$. The objective of the algorithm is to provide a sequential policy for user-product pair recommendation which will yield the highest pos...
computer science
12,225
Interactive Visual Data Exploration with Subjective Feedback: An Information-Theoretic Approach
stat.ML
Visual exploration of high-dimensional real-valued datasets is a fundamental task in exploratory data analysis (EDA). Existing methods use predefined criteria to choose the representation of data. There is a lack of methods that (i) elicit from the user what she has learned from the data and (ii) show patterns that she...
computer science
12,226
Interpretable Machine Learning for Privacy-Preserving Pervasive Systems
stat.ML
The presence of pervasive systems in our everyday lives and the interaction of users with connected devices such as smartphones or home appliances generate increasing amounts of traces that reflect users' behavior. A plethora of machine learning techniques enable service providers to process these traces to extract lat...
computer science
12,227
Stability Analysis of Optimal Adaptive Control using Value Iteration with Approximation Errors
math.OC
Adaptive optimal control using value iteration initiated from a stabilizing control policy is theoretically analyzed in terms of stability of the system during the learning stage without ignoring the effects of approximation errors. This analysis includes the system operated using any single/constant resulting control ...
computer science
12,228
Benchmark of Deep Learning Models on Large Healthcare MIMIC Datasets
cs.LG
Deep learning models (aka Deep Neural Networks) have revolutionized many fields including computer vision, natural language processing, speech recognition, and is being increasingly used in clinical healthcare applications. However, few works exist which have benchmarked the performance of the deep learning models with...
computer science
12,229
Auto-Differentiating Linear Algebra
cs.MS
Development systems for deep learning, such as Theano, Torch, TensorFlow, or MXNet, are easy-to-use tools for creating complex neural network models. Since gradient computations are automatically baked in, and execution is mapped to high performance hardware, these models can be trained end-to-end on large amounts of d...
computer science
12,230
A Bayesian Method for Joint Clustering of Vectorial Data and Network Data
stat.ML
We present a new model-based integrative method for clustering objects given both vectorial data, which describes the feature of each object, and network data, which indicates the similarity of connected objects. The proposed general model is able to cluster the two types of data simultaneously within one integrative p...
computer science
12,231
Curvature-aided Incremental Aggregated Gradient Method
stat.ML
We propose a new algorithm for finite sum optimization which we call the curvature-aided incremental aggregated gradient (CIAG) method. Motivated by the problem of training a classifier for a d-dimensional problem, where the number of training data is $m$ and $m \gg d \gg 1$, the CIAG method seeks to accelerate increme...
computer science
12,232
Unsupervised and Semi-supervised Anomaly Detection with LSTM Neural Networks
eess.SP
We investigate anomaly detection in an unsupervised framework and introduce Long Short Term Memory (LSTM) neural network based algorithms. In particular, given variable length data sequences, we first pass these sequences through our LSTM based structure and obtain fixed length sequences. We then find a decision functi...
computer science
12,233
DPCA: Dimensionality Reduction for Discriminative Analytics of Multiple Large-Scale Datasets
cs.LG
Principal component analysis (PCA) has well-documented merits for data extraction and dimensionality reduction. PCA deals with a single dataset at a time, and it is challenged when it comes to analyzing multiple datasets. Yet in certain setups, one wishes to extract the most significant information of one dataset relat...
computer science
12,234
A Markov Chain Theory Approach to Characterizing the Minimax Optimality of Stochastic Gradient Descent (for Least Squares)
stat.ML
This work provides a simplified proof of the statistical minimax optimality of (iterate averaged) stochastic gradient descent (SGD), for the special case of least squares. This result is obtained by analyzing SGD as a stochastic process and by sharply characterizing the stationary covariance matrix of this process. The...
computer science
12,235
Malware Detection by Eating a Whole EXE
stat.ML
In this work we introduce malware detection from raw byte sequences as a fruitful research area to the larger machine learning community. Building a neural network for such a problem presents a number of interesting challenges that have not occurred in tasks such as image processing or NLP. In particular, we note that ...
computer science
12,236
Stochastic Non-convex Optimization with Strong High Probability Second-order Convergence
math.OC
In this paper, we study stochastic non-convex optimization with non-convex random functions. Recent studies on non-convex optimization revolve around establishing second-order convergence, i.e., converging to a nearly second-order optimal stationary points. However, existing results on stochastic non-convex optimizatio...
computer science
12,237
Watch Your Step: Learning Graph Embeddings Through Attention
cs.LG
Graph embedding methods represent nodes in a continuous vector space, preserving information from the graph (e.g. by sampling random walks). There are many hyper-parameters to these methods (such as random walk length) which have to be manually tuned for every graph. In this paper, we replace random walk hyper-paramete...
computer science
12,238
Segment Parameter Labelling in MCMC Mean-Shift Change Detection
cs.LG
This work addresses the problem of segmentation in time series data with respect to a statistical parameter of interest in Bayesian models. It is common to assume that the parameters are distinct within each segment. As such, many Bayesian change point detection models do not exploit the segment parameter patterns, whi...
computer science
12,239
Optimal Shrinkage of Singular Values Under Random Data Contamination
cs.IT
A low rank matrix X has been contaminated by uniformly distributed noise, missing values, outliers and corrupt entries. Reconstruction of X from the singular values and singular vectors of the contaminated matrix Y is a key problem in machine learning, computer vision and data science. In this paper we show that common...
computer science
12,240
Gradient Sparsification for Communication-Efficient Distributed Optimization
cs.LG
Modern large scale machine learning applications require stochastic optimization algorithms to be implemented on distributed computational architectures. A key bottleneck is the communication overhead for exchanging information such as stochastic gradients among different workers. In this paper, to reduce the communica...
computer science
12,241
Regularization via Mass Transportation
math.OC
The goal of regression and classification methods in supervised learning is to minimize the empirical risk, that is, the expectation of some loss function quantifying the prediction error under the empirical distribution. When facing scarce training data, overfitting is typically mitigated by adding regularization term...
computer science
12,242
Advanced LSTM: A Study about Better Time Dependency Modeling in Emotion Recognition
cs.LG
Long short-term memory (LSTM) is normally used in recurrent neural network (RNN) as basic recurrent unit. However,conventional LSTM assumes that the state at current time step depends on previous time step. This assumption constraints the time dependency modeling capability. In this study, we propose a new variation of...
computer science
12,243
Learning Structural Node Embeddings Via Diffusion Wavelets
cs.SI
Nodes residing in different parts of a graph can have similar structural roles within their local network topology. The identification of such roles provides key insight into the organization of networks and can be used for a variety of machine learning tasks. However, learning structural representations of nodes is a ...
computer science
12,244
Lower Bounds for Higher-Order Convex Optimization
math.OC
State-of-the-art methods in convex and non-convex optimization employ higher-order derivative information, either implicitly or explicitly. We explore the limitations of higher-order optimization and prove that even for convex optimization, a polynomial dependence on the approximation guarantee and higher-order smoothn...
computer science
12,245
Diff-DAC: Distributed Actor-Critic for Multitask Deep Reinforcement Learning
cs.LG
We propose a multiagent distributed actor-critic algorithm for multitask reinforcement learning (MRL), named Diff-DAC. The agents are connected, forming a (possibly sparse) network. Each agent is assigned a task and has access to data from this local task only. During the learning process, the agents are able to commun...
computer science
12,246
Minimax Rates and Efficient Algorithms for Noisy Sorting
stat.ML
There has been a recent surge of interest in studying permutation-based models for ranking from pairwise comparison data. Despite being structurally richer and more robust than parametric ranking models, permutation-based models are less well understood statistically and generally lack efficient learning algorithms. In...
computer science
12,247
Speaker Diarization with LSTM
eess.AS
For many years, i-vector based audio embedding techniques were the dominant approach for speaker verification and speaker diarization applications. However, mirroring the rise of deep learning in various domains, neural network based audio embeddings, also known as d-vectors, have consistently demonstrated superior spe...
computer science
12,248
Attention-Based Models for Text-Dependent Speaker Verification
eess.AS
Attention-based models have recently shown great performance on a range of tasks, such as speech recognition, machine translation, and image captioning due to their ability to summarize relevant information that expands through the entire length of an input sequence. In this paper, we analyze the usage of attention mec...
computer science
12,249
Dimensionality reduction methods for molecular simulations
stat.ML
Molecular simulations produce very high-dimensional data-sets with millions of data points. As analysis methods are often unable to cope with so many dimensions, it is common to use dimensionality reduction and clustering methods to reach a reduced representation of the data. Yet these methods often fail to capture the...
computer science
12,250
Attacking the Madry Defense Model with $L_1$-based Adversarial Examples
stat.ML
The Madry Lab recently hosted a competition designed to test the robustness of their adversarially trained MNIST model. Attacks were constrained to perturb each pixel of the input image by a scaled maximal $L_\infty$ distortion $\epsilon$ = 0.3. This discourages the use of attacks which are not optimized on the $L_\inf...
computer science
12,251
Linearly convergent stochastic heavy ball method for minimizing generalization error
math.OC
In this work we establish the first linear convergence result for the stochastic heavy ball method. The method performs SGD steps with a fixed stepsize, amended by a heavy ball momentum term. In the analysis, we focus on minimizing the expected loss and not on finite-sum minimization, which is typically a much harder p...
computer science
12,252
Communication-Avoiding Optimization Methods for Massive-Scale Graphical Model Structure Learning
stat.ML
Undirected graphical models compactly represent the structure of large, high-dimensional data sets, which are especially important in interpreting complex scientific data. Some data sets may run to multiple terabytes, and current methods are intractable in both memory size and running time. We introduce HP-CONCORD, a h...
computer science
12,253
Understanding GANs: the LQG Setting
stat.ML
Generative Adversarial Networks (GANs) have become a popular method to learn a probability model from data. Many GAN architectures with different optimization metrics have been introduced recently. Instead of proposing yet another architecture, this paper aims to provide an understanding of some of the basic issues sur...
computer science
12,254
Stochastic gradient descent performs variational inference, converges to limit cycles for deep networks
cs.LG
Stochastic gradient descent (SGD) is widely believed to perform implicit regularization when used to train deep neural networks, but the precise manner in which this occurs has thus far been elusive. We prove that SGD minimizes an average potential over the posterior distribution of weights along with an entropic regul...
computer science
12,255
Onsets and Frames: Dual-Objective Piano Transcription
cs.SD
We consider the problem of transcribing polyphonic piano music with an emphasis on generalizing to unseen instruments. We use deep neural networks and propose a novel approach that predicts onsets and frames using both CNNs and LSTMs. This model predicts pitch onset events and then uses those predictions to condition f...
computer science
12,256
How Algorithmic Confounding in Recommendation Systems Increases Homogeneity and Decreases Utility
cs.CY
Recommendation systems occupy an expanding role in everyday decision making, from choice of movies and household goods to consequential medical and legal decisions. The data used to train and test these systems is algorithmically confounded in that it is the result of a feedback loop between human choices and an existi...
computer science
12,257
Time-lagged autoencoders: Deep learning of slow collective variables for molecular kinetics
stat.ML
Inspired by the success of deep learning techniques in the physical and chemical sciences, we apply a modification of an autoencoder type deep neural network to the task of dimension reduction of molecular dynamics data. We can show that our time-lagged autoencoder reliably finds low-dimensional embeddings for high-dim...
computer science
12,258
Approximation Algorithms for $\ell_0$-Low Rank Approximation
cs.DS
We study the $\ell_0$-Low Rank Approximation Problem, where the goal is, given an $m \times n$ matrix $A$, to output a rank-$k$ matrix $A'$ for which $\|A'-A\|_0$ is minimized. Here, for a matrix $B$, $\|B\|_0$ denotes the number of its non-zero entries. This NP-hard variant of low rank approximation is natural for pro...
computer science
12,259
The Exact Solution to Rank-1 L1-norm TUCKER2 Decomposition
cs.DS
We study rank-1 {L1-norm-based TUCKER2} (L1-TUCKER2) decomposition of 3-way tensors, treated as a collection of $N$ $D \times M$ matrices that are to be jointly decomposed. Our contributions are as follows. i) We prove that the problem is equivalent to combinatorial optimization over $N$ antipodal-binary variables. ii)...
computer science
12,260
Learning Neural Representations of Human Cognition across Many fMRI Studies
stat.ML
Cognitive neuroscience is enjoying rapid increase in extensive public brain-imaging datasets. It opens the door to large-scale statistical models. Finding a unified perspective for all available data calls for scalable and automated solutions to an old challenge: how to aggregate heterogeneous information on brain func...
computer science
12,261
Statistical Speech Enhancement Based on Probabilistic Integration of Variational Autoencoder and Non-Negative Matrix Factorization
cs.SD
This paper presents a statistical method of single-channel speech enhancement that uses a variational autoencoder (VAE) as a prior distribution on clean speech. A standard approach to speech enhancement is to train a deep neural network (DNN) to take noisy speech as input and output clean speech. Although this supervis...
computer science
12,262
Small Moving Window Calibration Models for Soft Sensing Processes with Limited History
stat.ML
Five simple soft sensor methodologies with two update conditions were compared on two experimentally-obtained datasets and one simulated dataset. The soft sensors investigated were moving window partial least squares regression (and a recursive variant), moving window random forest regression, the mean moving window of...
computer science
12,263
Gene Ontology (GO) Prediction using Machine Learning Methods
cs.LG
We applied machine learning to predict whether a gene is involved in axon regeneration. We extracted 31 features from different databases and trained five machine learning models. Our optimal model, a Random Forest Classifier with 50 submodels, yielded a test score of 85.71%, which is 4.1% higher than the baseline scor...
computer science
12,264
Calibration for Stratified Classification Models
stat.ME
In classification problems, sampling bias between training data and testing data is critical to the ranking performance of classification scores. Such bias can be both unintentionally introduced by data collection and intentionally introduced by the algorithm, such as under-sampling or weighting techniques applied to i...
computer science
12,265
Training GANs with Optimism
cs.LG
We address the issue of limit cycling behavior in training Generative Adversarial Networks and propose the use of Optimistic Mirror Decent (OMD) for training Wasserstein GANs. Recent theoretical results have shown that optimistic mirror decent (OMD) can enjoy faster regret rates in the context of zero-sum games. WGANs ...
computer science
12,266
Learning One-hidden-layer Neural Networks with Landscape Design
cs.LG
We consider the problem of learning a one-hidden-layer neural network: we assume the input $x\in \mathbb{R}^d$ is from Gaussian distribution and the label $y = a^\top \sigma(Bx) + \xi$, where $a$ is a nonnegative vector in $\mathbb{R}^m$ with $m\le d$, $B\in \mathbb{R}^{m\times d}$ is a full-rank weight matrix, and $\x...
computer science
12,267
Sleep Stage Classification Based on Multi-level Feature Learning and Recurrent Neural Networks via Wearable Device
stat.ML
This paper proposes a practical approach for automatic sleep stage classification based on a multi-level feature learning framework and Recurrent Neural Network (RNN) classifier using heart rate and wrist actigraphy derived from a wearable device. The feature learning framework is designed to extract low- and mid-level...
computer science
12,268
Approximation of Functions over Manifolds: A Moving Least-Squares Approach
stat.ML
We present an algorithm for approximating a function defined over a $d$-dimensional manifold utilizing only noisy function values at locations sampled from the manifold with noise. To produce the approximation we do not require any knowledge regarding the manifold other than its dimension $d$. The approximation scheme ...
computer science
12,269
Sparse-View X-Ray CT Reconstruction Using $\ell_1$ Prior with Learned Transform
stat.ML
A major challenge in X-ray computed tomography (CT) is reducing radiation dose while maintaining high quality of reconstructed images. To reduce the radiation dose, one can reduce the number of projection views (sparse-view CT); however, it becomes difficult to achieve high quality image reconstruction as the number of...
computer science
12,270
Learning Linear Dynamical Systems via Spectral Filtering
cs.LG
We present an efficient and practical algorithm for the online prediction of discrete-time linear dynamical systems with a symmetric transition matrix. We circumvent the non-convex optimization problem using improper learning: carefully overparameterize the class of LDSs by a polylogarithmic factor, in exchange for con...
computer science
12,271
From which world is your graph?
cs.LG
Discovering statistical structure from links is a fundamental problem in the analysis of social networks. Choosing a misspecified model, or equivalently, an incorrect inference algorithm will result in an invalid analysis or even falsely uncover patterns that are in fact artifacts of the model. This work focuses on uni...
computer science
12,272
Partial correlation graphs and the neighborhood lattice
math.ST
We define and study partial correlation graphs (PCGs) with variables in a general Hilbert space and their connections to generalized neighborhood regression, without making any distributional assumptions. Using operator-theoretic arguments, and especially the properties of projection operators on Hilbert spaces, we sho...
computer science
12,273
Stochastic Submodular Maximization: The Case of Coverage Functions
cs.LG
Stochastic optimization of continuous objectives is at the heart of modern machine learning. However, many important problems are of discrete nature and often involve submodular objectives. We seek to unleash the power of stochastic continuous optimization, namely stochastic gradient descent and its variants, to such d...
computer science
12,274
Approximating Partition Functions in Constant Time
cs.LG
We study approximations of the partition function of dense graphical models. Partition functions of graphical models play a fundamental role is statistical physics, in statistics and in machine learning. Two of the main methods for approximating the partition function are Markov Chain Monte Carlo and Variational Method...
computer science
12,275
Memory-efficient Kernel PCA via Partial Matrix Sampling and Nonconvex Optimization: a Model-free Analysis of Local Minima
math.OC
Kernel PCA is a widely used nonlinear dimension reduction technique in machine learning, but storing the kernel matrix is notoriously challenging when the sample size is large. Inspired by Yi et al. [2016], where the idea of partial matrix sampling followed by nonconvex optimization is proposed for matrix completion an...
computer science
12,276
AdaBatch: Efficient Gradient Aggregation Rules for Sequential and Parallel Stochastic Gradient Methods
cs.LG
We study a new aggregation operator for gradients coming from a mini-batch for stochastic gradient (SG) methods that allows a significant speed-up in the case of sparse optimization problems. We call this method AdaBatch and it only requires a few lines of code change compared to regular mini-batch SGD algorithms. We p...
computer science
12,277
Fast amortized inference of neural activity from calcium imaging data with variational autoencoders
stat.ML
Calcium imaging permits optical measurement of neural activity. Since intracellular calcium concentration is an indirect measurement of neural activity, computational tools are necessary to infer the true underlying spiking activity from fluorescence measurements. Bayesian model inversion can be used to solve this prob...
computer science
12,278
Estimating Cosmological Parameters from the Dark Matter Distribution
cs.LG
A grand challenge of the 21st century cosmology is to accurately estimate the cosmological parameters of our Universe. A major approach to estimating the cosmological parameters is to use the large-scale matter distribution of the Universe. Galaxy surveys provide the means to map out cosmic large-scale structure in thr...
computer science
12,279
An efficient quantum algorithm for generative machine learning
cs.LG
A central task in the field of quantum computing is to find applications where quantum computer could provide exponential speedup over any classical computer. Machine learning represents an important field with broad applications where quantum computer may offer significant speedup. Several quantum algorithms for discr...
computer science
12,280
Regret Bounds and Regimes of Optimality for User-User and Item-Item Collaborative Filtering
stat.ML
We consider an online model for recommendation systems, with each user being recommended an item at each time-step and providing 'like' or 'dislike' feedback. A latent variable model specifies the user preferences: both users and items are clustered into types. All users of a given type have identical preferences for t...
computer science
12,281
Flexpoint: An Adaptive Numerical Format for Efficient Training of Deep Neural Networks
cs.LG
Deep neural networks are commonly developed and trained in 32-bit floating point format. Significant gains in performance and energy efficiency could be realized by training and inference in numerical formats optimized for deep learning. Despite advances in limited precision inference in recent years, training of neura...
computer science
12,282
Finding Heavily-Weighted Features in Data Streams
cs.LG
We introduce a new sub-linear space data structure---the Weight-Median Sketch---that captures the most heavily weighted features in linear classifiers trained over data streams. This enables memory-limited execution of several statistical analyses over streams, including online feature selection, streaming data explana...
computer science
12,283
Neural system identification for large populations separating "what" and "where"
stat.ML
Neuroscientists classify neurons into different types that perform similar computations at different locations in the visual field. Traditional methods for neural system identification do not capitalize on this separation of 'what' and 'where'. Learning deep convolutional feature spaces that are shared among many neuro...
computer science
12,284
Stochastic Cubic Regularization for Fast Nonconvex Optimization
cs.LG
This paper proposes a stochastic variant of a classic algorithm---the cubic-regularized Newton method [Nesterov and Polyak 2006]. The proposed algorithm efficiently escapes saddle points and finds approximate local minima for general smooth, nonconvex functions in only $\mathcal{\tilde{O}}(\epsilon^{-3.5})$ stochastic ...
computer science
12,285
Using Phone Sensors and an Artificial Neural Network to Detect Gait Changes During Drinking Episodes in the Natural Environment
cs.CY
Phone sensors could be useful in assessing changes in gait that occur with alcohol consumption. This study determined (1) feasibility of collecting gait-related data during drinking occasions in the natural environment, and (2) how gait-related features measured by phone sensors relate to estimated blood alcohol concen...
computer science
12,286
Learning Non-overlapping Convolutional Neural Networks with Multiple Kernels
cs.LG
In this paper, we consider parameter recovery for non-overlapping convolutional neural networks (CNNs) with multiple kernels. We show that when the inputs follow Gaussian distribution and the sample size is sufficiently large, the squared loss of such CNNs is $\mathit{~locally~strongly~convex}$ in a basin of attraction...
computer science
12,287
SHOPPER: A Probabilistic Model of Consumer Choice with Substitutes and Complements
stat.ML
We develop SHOPPER, a sequential probabilistic model of market baskets. SHOPPER uses interpretable components to model the forces that drive how a customer chooses products; in particular, we designed SHOPPER to capture how items interact with other items. We develop an efficient posterior inference algorithm to estima...
computer science
12,288
Traffic Analysis with Deep Learning
cs.CR
Deep Neural Networks (DNN) has obtained enormous attention with its advantageous feature learning and its powerful prediction ability. In this paper, we broadly study the applicability of deep learning to traffic analysis and present its effectiveness on the feature extraction for state-of-the-art machine learning algo...
computer science
12,289
WMRB: Learning to Rank in a Scalable Batch Training Approach
stat.ML
We propose a new learning to rank algorithm, named Weighted Margin-Rank Batch loss (WMRB), to extend the popular Weighted Approximate-Rank Pairwise loss (WARP). WMRB uses a new rank estimator and an efficient batch training algorithm. The approach allows more accurate item rank approximation and explicit utilization of...
computer science
12,290
A Batch Learning Framework for Scalable Personalized Ranking
stat.ML
In designing personalized ranking algorithms, it is desirable to encourage a high precision at the top of the ranked list. Existing methods either seek a smooth convex surrogate for a non-smooth ranking metric or directly modify updating procedures to encourage top accuracy. In this work we point out that these methods...
computer science
12,291
Enhancing Network Embedding with Auxiliary Information: An Explicit Matrix Factorization Perspective
cs.SI
Recent advances in the field of network embedding have shown the low-dimensional network representation is playing a critical role in network analysis. However, most of the existing principles of network embedding do not incorporate auxiliary information such as content and labels of nodes flexibly. In this paper, we t...
computer science
12,292
STWalk: Learning Trajectory Representations in Temporal Graphs
cs.SI
Analyzing the temporal behavior of nodes in time-varying graphs is useful for many applications such as targeted advertising, community evolution and outlier detection. In this paper, we present a novel approach, STWalk, for learning trajectory representations of nodes in temporal graphs. The proposed framework makes u...
computer science
12,293
A Sparse Graph-Structured Lasso Mixed Model for Genetic Association with Confounding Correction
cs.LG
While linear mixed model (LMM) has shown a competitive performance in correcting spurious associations raised by population stratification, family structures, and cryptic relatedness, more challenges are still to be addressed regarding the complex structure of genotypic and phenotypic data. For example, geneticists hav...
computer science
12,294
Linking Sequences of Events with Sparse or No Common Occurrence across Data Sets
cs.LG
Data of practical interest - such as personal records, transaction logs, and medical histories - are sequential collections of events relevant to a particular source entity. Recent studies have attempted to link sequences that represent a common entity across data sets to allow more comprehensive statistical analyses a...
computer science
12,295
On the ERM Principle with Networked Data
cs.LG
Networked data, in which every training example involves two objects and may share some common objects with others, is used in many machine learning tasks such as learning to rank and link prediction. A challenge of learning from networked examples is that target values are not known for some pairs of objects. In this ...
computer science
12,296
A machine learning approach for efficient uncertainty quantification using multiscale methods
cs.LG
Several multiscale methods account for sub-grid scale features using coarse scale basis functions. For example, in the Multiscale Finite Volume method the coarse scale basis functions are obtained by solving a set of local problems over dual-grid cells. We introduce a data-driven approach for the estimation of these co...
computer science
12,297
A Parallel Best-Response Algorithm with Exact Line Search for Nonconvex Sparsity-Regularized Rank Minimization
cs.DC
In this paper, we propose a convergent parallel best-response algorithm with the exact line search for the nondifferentiable nonconvex sparsity-regularized rank minimization problem. On the one hand, it exhibits a faster convergence than subgradient algorithms and block coordinate descent algorithms. On the other hand,...
computer science
12,298
Tensor Decompositions for Modeling Inverse Dynamics
cs.LG
Modeling inverse dynamics is crucial for accurate feedforward robot control. The model computes the necessary joint torques, to perform a desired movement. The highly non-linear inverse function of the dynamical system can be approximated using regression techniques. We propose as regression method a tensor decompositi...
computer science
12,299
Invariances and Data Augmentation for Supervised Music Transcription
stat.ML
This paper explores a variety of models for frame-based music transcription, with an emphasis on the methods needed to reach state-of-the-art on human recordings. The translation-invariant network discussed in this paper, which combines a traditional filterbank with a convolutional neural network, was the top-performin...
computer science
12,300
Near-optimal sample complexity for convex tensor completion
cs.LG
We analyze low rank tensor completion (TC) using noisy measurements of a subset of the tensor. Assuming a rank-$r$, order-$d$, $N \times N \times \cdots \times N$ tensor where $r=O(1)$, the best sampling complexity that was achieved is $O(N^{\frac{d}{2}})$, which is obtained by solving a tensor nuclear-norm minimizatio...
computer science