query stringclasses 190 values | positive listlengths 1 5 | negative listlengths 4 4 | system stringlengths 69 2.19k |
|---|---|---|---|
What is the biomedical concept corresponding to 'patient'? | [
"human (homo sapiens)",
"homo sapiens (human)"
] | [
"probles",
"genus",
"this",
"species"
] | Given the context 'Multiple blood cultures taken while the patient was receiving antibiotics were negative, as were those obtained 48 and 72 hours after discontinuation of antibiotics.
', answer the user's query. |
What is the biomedical concept corresponding to 's. faecium'? | [
"streptococcus faecium (enterococcus faecium)",
"enterococcus faecium (streptococcus faecium)"
] | [
"clostridium faecium",
"sphingobacterium faecium",
"enterenecus faecium (candidatus enterenecus faecium)",
"brachybacterium faecium"
] | Given the context '244
S. FAECIUM ENDOCARDITIS
Third Admission (August 12-October 4, 1981)
Withing a week following discharge, the patient again developed fever, nocturnal sweats, and malaise.', answer the user's query. |
What is the biomedical concept corresponding to 'patient'? | [
"human (homo sapiens)",
"homo sapiens (human)"
] | [
"probles",
"genus",
"this",
"species"
] | Given the context '244
S. FAECIUM ENDOCARDITIS
Third Admission (August 12-October 4, 1981)
Withing a week following discharge, the patient again developed fever, nocturnal sweats, and malaise.', answer the user's query. |
What is the biomedical concept corresponding to 's. faecium'? | [
"streptococcus faecium (enterococcus faecium)",
"enterococcus faecium (streptococcus faecium)"
] | [
"clostridium faecium",
"sphingobacterium faecium",
"enterenecus faecium (candidatus enterenecus faecium)",
"brachybacterium faecium"
] | Given the context 'S. faecium (large colony morphotype, and poorly growing small colony morphotype) grew from six sets of blood cultures obtained on admission.', answer the user's query. |
What is the biomedical concept corresponding to 'patient'? | [
"human (homo sapiens)",
"homo sapiens (human)"
] | [
"probles",
"genus",
"this",
"species"
] | Given the context 'The patient underwent mitral valve replacement, receiving a number 31 porcine Hancock bioprosthesis and bypass graft to the midportion of the LAD.', answer the user's query. |
What is the biomedical concept corresponding to 's. faecium'? | [
"streptococcus faecium (enterococcus faecium)",
"enterococcus faecium (streptococcus faecium)"
] | [
"clostridium faecium",
"sphingobacterium faecium",
"enterenecus faecium (candidatus enterenecus faecium)",
"brachybacterium faecium"
] | Given the context 'Bacterial and fungal stains were negative but S. faecium grew from fragments of the resected valve.', answer the user's query. |
What is the biomedical concept corresponding to 'patient'? | [
"human (homo sapiens)",
"homo sapiens (human)"
] | [
"probles",
"genus",
"this",
"species"
] | Given the context 'Following surgery the patient received six additional weeks parenteral penicillin and streptomycin.', answer the user's query. |
What is the biomedical concept corresponding to 's. faecium'? | [
"streptococcus faecium (enterococcus faecium)",
"enterococcus faecium (streptococcus faecium)"
] | [
"clostridium faecium",
"sphingobacterium faecium",
"enterenecus faecium (candidatus enterenecus faecium)",
"brachybacterium faecium"
] | Given the context 'The minimum inhibitory and bactericidal concentrations of penicillin, ampicillin, and tobramycin against the S. faecium isolated from the patient's blood cultures
TABLE 1
Minimum Inhibitory and Bactericidal Concentrations of Antibiotics,
Against Streptococcus faecium Isolates from Blood Cultures
Date Penicillin Ampicillin Tobramycin
Organism Isolated MIC MIC MBC MIC MBC S. faecium, prior to ampicillin/
tobramycin therapy 3/17/81 2 1 2 >32 >32 S. faecium, after ampicillin/
tobramycin therapy
a.', answer the user's query. |
What is the biomedical concept corresponding to 'patient'? | [
"human (homo sapiens)",
"homo sapiens (human)"
] | [
"probles",
"genus",
"this",
"species"
] | Given the context 'The minimum inhibitory and bactericidal concentrations of penicillin, ampicillin, and tobramycin against the S. faecium isolated from the patient's blood cultures
TABLE 1
Minimum Inhibitory and Bactericidal Concentrations of Antibiotics,
Against Streptococcus faecium Isolates from Blood Cultures
Date Penicillin Ampicillin Tobramycin
Organism Isolated MIC MIC MBC MIC MBC S. faecium, prior to ampicillin/
tobramycin therapy 3/17/81 2 1 2 >32 >32 S. faecium, after ampicillin/
tobramycin therapy
a.', answer the user's query. |
What is the biomedical concept corresponding to 'streptococcus faecium'? | [
"streptococcus faecium (enterococcus faecium)",
"enterococcus faecium (streptococcus faecium)"
] | [
"streptococcus faecalis (enterococcus faecalis)",
"streptococcus faecium var. casseliflavus (enterococcus casseliflavus)",
"sphingobacterium faecium",
"bacteroides faecium"
] | Given the context 'The minimum inhibitory and bactericidal concentrations of penicillin, ampicillin, and tobramycin against the S. faecium isolated from the patient's blood cultures
TABLE 1
Minimum Inhibitory and Bactericidal Concentrations of Antibiotics,
Against Streptococcus faecium Isolates from Blood Cultures
Date Penicillin Ampicillin Tobramycin
Organism Isolated MIC MIC MBC MIC MBC S. faecium, prior to ampicillin/
tobramycin therapy 3/17/81 2 1 2 >32 >32 S. faecium, after ampicillin/
tobramycin therapy
a.', answer the user's query. |
What is the biomedical concept corresponding to 's. faecium'? | [
"streptococcus faecium (enterococcus faecium)",
"enterococcus faecium (streptococcus faecium)"
] | [
"clostridium faecium",
"sphingobacterium faecium",
"enterenecus faecium (candidatus enterenecus faecium)",
"brachybacterium faecium"
] | Given the context 'The minimum inhibitory and bactericidal concentrations of penicillin, ampicillin, and tobramycin against the S. faecium isolated from the patient's blood cultures
TABLE 1
Minimum Inhibitory and Bactericidal Concentrations of Antibiotics,
Against Streptococcus faecium Isolates from Blood Cultures
Date Penicillin Ampicillin Tobramycin
Organism Isolated MIC MIC MBC MIC MBC S. faecium, prior to ampicillin/
tobramycin therapy 3/17/81 2 1 2 >32 >32 S. faecium, after ampicillin/
tobramycin therapy
a.', answer the user's query. |
What is the biomedical concept corresponding to 's. faecium'? | [
"streptococcus faecium (enterococcus faecium)",
"enterococcus faecium (streptococcus faecium)"
] | [
"clostridium faecium",
"sphingobacterium faecium",
"enterenecus faecium (candidatus enterenecus faecium)",
"brachybacterium faecium"
] | Given the context 'The minimum inhibitory and bactericidal concentrations of penicillin, ampicillin, and tobramycin against the S. faecium isolated from the patient's blood cultures
TABLE 1
Minimum Inhibitory and Bactericidal Concentrations of Antibiotics,
Against Streptococcus faecium Isolates from Blood Cultures
Date Penicillin Ampicillin Tobramycin
Organism Isolated MIC MIC MBC MIC MBC S. faecium, prior to ampicillin/
tobramycin therapy 3/17/81 2 1 2 >32 >32 S. faecium, after ampicillin/
tobramycin therapy
a.', answer the user's query. |
What is the biomedical concept corresponding to 'patient'? | [
"human (homo sapiens)",
"homo sapiens (human)"
] | [
"probles",
"genus",
"this",
"species"
] | Given the context '3- \ "'' ing the effects of various penicillinO aminoglycoside combinations on S. {73 2- \ >, faecium obtained from the patient's
blood cultures immediately prior to mitral valve excision.', answer the user's query. |
What is the biomedical concept corresponding to 's. faecium'? | [
"streptococcus faecium (enterococcus faecium)",
"enterococcus faecium (streptococcus faecium)"
] | [
"clostridium faecium",
"sphingobacterium faecium",
"enterenecus faecium (candidatus enterenecus faecium)",
"brachybacterium faecium"
] | Given the context 'Twenty-four hour time-kill curves for penicillin in combination with various aminoglycosides were performed by Dr. Robert Moellering on the S. faecium isolated from the patient's blood immediately prior to mitral valve excision and replacement (Fig. 1).', answer the user's query. |
What is the biomedical concept corresponding to 'patient'? | [
"human (homo sapiens)",
"homo sapiens (human)"
] | [
"probles",
"genus",
"this",
"species"
] | Given the context 'Twenty-four hour time-kill curves for penicillin in combination with various aminoglycosides were performed by Dr. Robert Moellering on the S. faecium isolated from the patient's blood immediately prior to mitral valve excision and replacement (Fig. 1).', answer the user's query. |
What is the biomedical concept corresponding to 's. faecalis'? | [
"streptococcus faecalis (enterococcus faecalis)",
"enterococcus faecalis (streptococcus glycerinaceus)",
"enterococcus proteiformis (enterococcus faecalis)",
"streptococcus liquefaciens (enterococcus faecalis)",
"enterocoque (enterococcus faecalis)"
] | [
"staphylococcus faecalis ('staphylococcus faecalis')",
"'staphylococcus faecalis' (staphylococcus faecalis)",
"escherichia faecalis ('escherichia faecalis')",
"'escherichia faecalis' (escherichia faecalis)"
] | Given the context 'Although S. faecalis represents the majority of clinical enterococcal isolates, S. faecium nonetheless comprises 5-10 percent of these isolates in some series [3,4].', answer the user's query. |
What is the biomedical concept corresponding to 's. faecium'? | [
"streptococcus faecium (enterococcus faecium)",
"enterococcus faecium (streptococcus faecium)"
] | [
"clostridium faecium",
"sphingobacterium faecium",
"enterenecus faecium (candidatus enterenecus faecium)",
"brachybacterium faecium"
] | Given the context 'Although S. faecalis represents the majority of clinical enterococcal isolates, S. faecium nonetheless comprises 5-10 percent of these isolates in some series [3,4].', answer the user's query. |
What is the biomedical concept corresponding to 's. faecium'? | [
"streptococcus faecium (enterococcus faecium)",
"enterococcus faecium (streptococcus faecium)"
] | [
"clostridium faecium",
"sphingobacterium faecium",
"enterenecus faecium (candidatus enterenecus faecium)",
"brachybacterium faecium"
] | Given the context 'The MIC of penicillin against S. faecium is higher and this organism is more resistant to a number of different combinations of penicillin and various aminoglycosides than is S. faecalis', answer the user's query. |
What is the biomedical concept corresponding to 's. faecalis'? | [
"streptococcus faecalis (enterococcus faecalis)",
"enterococcus faecalis (streptococcus glycerinaceus)",
"enterococcus proteiformis (enterococcus faecalis)",
"streptococcus liquefaciens (enterococcus faecalis)",
"enterocoque (enterococcus faecalis)"
] | [
"staphylococcus faecalis ('staphylococcus faecalis')",
"'staphylococcus faecalis' (staphylococcus faecalis)",
"escherichia faecalis ('escherichia faecalis')",
"'escherichia faecalis' (escherichia faecalis)"
] | Given the context 'The MIC of penicillin against S. faecium is higher and this organism is more resistant to a number of different combinations of penicillin and various aminoglycosides than is S. faecalis', answer the user's query. |
What is the biomedical concept corresponding to 's. faecium'? | [
"streptococcus faecium (enterococcus faecium)",
"enterococcus faecium (streptococcus faecium)"
] | [
"clostridium faecium",
"sphingobacterium faecium",
"enterenecus faecium (candidatus enterenecus faecium)",
"brachybacterium faecium"
] | Given the context 'Clinically achievable levels of amino
246
S. FAECIUM ENDOCARDITIS
glycosides are generally ineffective against enterococci.', answer the user's query. |
What is the biomedical concept corresponding to 's. faecalis'? | [
"streptococcus faecalis (enterococcus faecalis)",
"enterococcus faecalis (streptococcus glycerinaceus)",
"enterococcus proteiformis (enterococcus faecalis)",
"streptococcus liquefaciens (enterococcus faecalis)",
"enterocoque (enterococcus faecalis)"
] | [
"staphylococcus faecalis ('staphylococcus faecalis')",
"'staphylococcus faecalis' (staphylococcus faecalis)",
"escherichia faecalis ('escherichia faecalis')",
"'escherichia faecalis' (escherichia faecalis)"
] | Given the context 'Plasmid-mediated modifying enzymes have been found in both S. faecalis and S. faecium' [12].', answer the user's query. |
What is the biomedical concept corresponding to 's. faecium'? | [
"streptococcus faecium (enterococcus faecium)",
"enterococcus faecium (streptococcus faecium)"
] | [
"clostridium faecium",
"sphingobacterium faecium",
"enterenecus faecium (candidatus enterenecus faecium)",
"brachybacterium faecium"
] | Given the context 'Plasmid-mediated modifying enzymes have been found in both S. faecalis and S. faecium' [12].', answer the user's query. |
What is the biomedical concept corresponding to 's. faecium'? | [
"streptococcus faecium (enterococcus faecium)",
"enterococcus faecium (streptococcus faecium)"
] | [
"clostridium faecium",
"sphingobacterium faecium",
"enterenecus faecium (candidatus enterenecus faecium)",
"brachybacterium faecium"
] | Given the context 'Combinations of penicillin with kanamycin, tobramycin, sisomicin, and netilmicin have consistently failed to demonstrate synergistic killing of S. faecium in vitro [6].', answer the user's query. |
What is the biomedical concept corresponding to 'rabbit'? | [
"rabbit (oryctolagus cuniculus)",
"european rabbit (oryctolagus cuniculus)",
"domestic rabbit (oryctolagus cuniculus)",
"rabbits (oryctolagus cuniculus)",
"japanese white rabbit (oryctolagus cuniculus)"
] | [
"rabbits and hares (leporidae)",
"swamp rabbit (sylvilagus aquaticus)",
"lepus cuniculus cuniculus (oryctolagus cuniculus cuniculus)",
"marsh rabbit (sylvilagus palustris)"
] | Given the context 'Moellering et al. demonstrated in vivo, utilizing the rabbit model of endocarditis, that penicillin and netilmicin were not efficacious in the treatment of endocarditis caused by a low-level aminoglycoside-resistant strain of S. faecium [6].', answer the user's query. |
What is the biomedical concept corresponding to 's. faecium'? | [
"streptococcus faecium (enterococcus faecium)",
"enterococcus faecium (streptococcus faecium)"
] | [
"clostridium faecium",
"sphingobacterium faecium",
"enterenecus faecium (candidatus enterenecus faecium)",
"brachybacterium faecium"
] | Given the context 'Moellering et al. demonstrated in vivo, utilizing the rabbit model of endocarditis, that penicillin and netilmicin were not efficacious in the treatment of endocarditis caused by a low-level aminoglycoside-resistant strain of S. faecium [6].', answer the user's query. |
What is the biomedical concept corresponding to 's. faecium'? | [
"streptococcus faecium (enterococcus faecium)",
"enterococcus faecium (streptococcus faecium)"
] | [
"clostridium faecium",
"sphingobacterium faecium",
"enterenecus faecium (candidatus enterenecus faecium)",
"brachybacterium faecium"
] | Given the context 'In the present case, the recurrence of S. faecium endocarditis after six weeks of therapy with ampicillin and tobramycin confirms the therapeutic and clinical significance of their data, and emphasizes that tobramycin is not an aminoglycoside to be used for treatment of serious S. faecium infections.
', answer the user's query. |
What is the biomedical concept corresponding to 's. faecium'? | [
"streptococcus faecium (enterococcus faecium)",
"enterococcus faecium (streptococcus faecium)"
] | [
"clostridium faecium",
"sphingobacterium faecium",
"enterenecus faecium (candidatus enterenecus faecium)",
"brachybacterium faecium"
] | Given the context 'In the present case, the recurrence of S. faecium endocarditis after six weeks of therapy with ampicillin and tobramycin confirms the therapeutic and clinical significance of their data, and emphasizes that tobramycin is not an aminoglycoside to be used for treatment of serious S. faecium infections.
', answer the user's query. |
What is the biomedical concept corresponding to 'staphylococcus aureus'? | [
"staphylococcus pyogenes aureus (staphylococcus aureus)",
"micrococcus aureus (staphylococcus aureus)",
"staphylococcus aureus (staphylococcus aureus subsp. anaerobius)",
"micrococcus pyogenes (staphylococcus aureus)"
] | [
"staphylococcus staphylolyticus (staphylococcus simulans bv. staphylolyticus)",
"staphylococcus aureus subsp. aureus col (staphylococcus aureus col)",
"staphylococcus aureus col (staphylococcus aureus subsp. aureus col)",
"staphylococcus sp. s"
] | Given the context 'Bacterial tolerance has been suggested as a possible basis for therapeutic failures, particularly in the treatment of infections caused by Staphylococcus aureus with defects in the production of autolysins.', answer the user's query. |
What is the biomedical concept corresponding to 's. faecalis'? | [
"streptococcus faecalis (enterococcus faecalis)",
"enterococcus faecalis (streptococcus glycerinaceus)",
"enterococcus proteiformis (enterococcus faecalis)",
"streptococcus liquefaciens (enterococcus faecalis)",
"enterocoque (enterococcus faecalis)"
] | [
"staphylococcus faecalis ('staphylococcus faecalis')",
"'staphylococcus faecalis' (staphylococcus faecalis)",
"escherichia faecalis ('escherichia faecalis')",
"'escherichia faecalis' (escherichia faecalis)"
] | Given the context 'Lorian has also described the formation of numerous aberrant cross-walls by S. faecalis grown in the presence of subinhibitory concentrations of penicillin', answer the user's query. |
What is the biomedical concept corresponding to 's. faecium'? | [
"streptococcus faecium (enterococcus faecium)",
"enterococcus faecium (streptococcus faecium)"
] | [
"clostridium faecium",
"sphingobacterium faecium",
"enterenecus faecium (candidatus enterenecus faecium)",
"brachybacterium faecium"
] | Given the context 'MBCs were only slightly higher than MICs for the three S. faecium variants obtained from our patient, and they did not appear to be tolerant strains of S. faecium.', answer the user's query. |
What is the biomedical concept corresponding to 'patient'? | [
"human (homo sapiens)",
"homo sapiens (human)"
] | [
"probles",
"genus",
"this",
"species"
] | Given the context 'MBCs were only slightly higher than MICs for the three S. faecium variants obtained from our patient, and they did not appear to be tolerant strains of S. faecium.', answer the user's query. |
What is the biomedical concept corresponding to 's. faecium'? | [
"streptococcus faecium (enterococcus faecium)",
"enterococcus faecium (streptococcus faecium)"
] | [
"clostridium faecium",
"sphingobacterium faecium",
"enterenecus faecium (candidatus enterenecus faecium)",
"brachybacterium faecium"
] | Given the context 'MBCs were only slightly higher than MICs for the three S. faecium variants obtained from our patient, and they did not appear to be tolerant strains of S. faecium.', answer the user's query. |
What is the biomedical concept corresponding to 'streptococcus faecium'? | [
"streptococcus faecium (enterococcus faecium)",
"enterococcus faecium (streptococcus faecium)"
] | [
"streptococcus faecalis (enterococcus faecalis)",
"streptococcus faecium var. casseliflavus (enterococcus casseliflavus)",
"sphingobacterium faecium",
"bacteroides faecium"
] | Given the context 'Alternatively, a
'Wennersten C, Moellering RC Jr: Mechanism of resistance to penicillin-aminoglycoside synergism in Streptococcus faecium.', answer the user's query. |
What is the biomedical concept corresponding to 'patient'? | [
"human (homo sapiens)",
"homo sapiens (human)"
] | [
"probles",
"genus",
"this",
"species"
] | Given the context 'In summary, our patient was treated for Streptococcusfaecium endocarditis with both ampicillin and the aminoglycoside antibiotic, tobramycin.', answer the user's query. |
What is the biomedical concept corresponding to 'streptococcusfaecium'? | [
"streptococcus faecium (enterococcus faecium)",
"enterococcus faecium (streptococcus faecium)"
] | [
"streptococcus faecalis (enterococcus faecalis)",
"streptococcus faecium var. casseliflavus (enterococcus casseliflavus)",
"staphylococcus faecalis ('staphylococcus faecalis')",
"sphingobacterium faecium"
] | Given the context 'In summary, our patient was treated for Streptococcusfaecium endocarditis with both ampicillin and the aminoglycoside antibiotic, tobramycin.', answer the user's query. |
What is the biomedical concept corresponding to 'patient'? | [
"human (homo sapiens)",
"homo sapiens (human)"
] | [
"probles",
"genus",
"this",
"species"
] | Given the context 'The authors also wish to thank Dr. Howard S. Forster for referring this patient to us, Ms. Mary Murray and Deborah Beauvais for manuscript preparation, and Ms. Gertrude Barden, MT (ASCP), MHS, for technical assistance and advice in evaluation of this patient.
', answer the user's query. |
What is the biomedical concept corresponding to 'patient'? | [
"human (homo sapiens)",
"homo sapiens (human)"
] | [
"probles",
"genus",
"this",
"species"
] | Given the context 'The authors also wish to thank Dr. Howard S. Forster for referring this patient to us, Ms. Mary Murray and Deborah Beauvais for manuscript preparation, and Ms. Gertrude Barden, MT (ASCP), MHS, for technical assistance and advice in evaluation of this patient.
', answer the user's query. |
What is the biomedical concept corresponding to 'human'? | [
"human (homo sapiens)",
"homo sapiens (human)"
] | [
"humans (homo)",
"homo (humans)",
"kingdom",
"genus"
] | Given the context 'Facklam RR: Recognition of group D streptococcal species of human origin by biochemical and
physiological tests.', answer the user's query. |
What is the biomedical concept corresponding to 'streptococcus faecium'? | [
"streptococcus faecium (enterococcus faecium)",
"enterococcus faecium (streptococcus faecium)"
] | [
"streptococcus faecalis (enterococcus faecalis)",
"streptococcus faecium var. casseliflavus (enterococcus casseliflavus)",
"sphingobacterium faecium",
"bacteroides faecium"
] | Given the context 'Shungu DL, Cornett JB, Shockman GD: Morphological and physiological study of autolytic
defective Streptococcus faecium strains.', answer the user's query. |
What is the biomedical concept corresponding to 'streptococcusfaecium'? | [
"streptococcus faecium (enterococcus faecium)",
"enterococcus faecium (streptococcus faecium)"
] | [
"streptococcus faecalis (enterococcus faecalis)",
"streptococcus faecium var. casseliflavus (enterococcus casseliflavus)",
"staphylococcus faecalis ('staphylococcus faecalis')",
"sphingobacterium faecium"
] | Given the context 'Moellering RC Jr, Korzeniowski OM, Sande MA, et al: Species-specific resistance to antimicrobial
synergism in Streptococcusfaecium and Streptococcusfaecalis.', answer the user's query. |
What is the biomedical concept corresponding to 'streptococcusfaecalis'? | [
"streptococcus faecalis (enterococcus faecalis)",
"enterococcus faecalis (streptococcus glycerinaceus)"
] | [
"streptococcus cecorum (enterococcus cecorum)",
"enterococcus cecorum (streptococcus cecorum)",
"streptococcus intestinalis (streptococcus alactolyticus)",
"streptococcus alactolyticus (streptococcus intestinalis)"
] | Given the context 'Moellering RC Jr, Korzeniowski OM, Sande MA, et al: Species-specific resistance to antimicrobial
synergism in Streptococcusfaecium and Streptococcusfaecalis.', answer the user's query. |
What is the biomedical concept corresponding to 's. faecalis'? | [
"streptococcus faecalis (enterococcus faecalis)",
"enterococcus faecalis (streptococcus glycerinaceus)",
"enterococcus proteiformis (enterococcus faecalis)",
"streptococcus liquefaciens (enterococcus faecalis)",
"enterocoque (enterococcus faecalis)"
] | [
"staphylococcus faecalis ('staphylococcus faecalis')",
"'staphylococcus faecalis' (staphylococcus faecalis)",
"escherichia faecalis ('escherichia faecalis')",
"'escherichia faecalis' (escherichia faecalis)"
] | Given the context 'Moellering RC Jr, Murray BE, Schoenbaum SC, et al: A novel mechanism of resistance to penicillin
gentamicin synergism in S. faecalis.', answer the user's query. |
What is the biomedical concept corresponding to 'streptococcusfaecalis'? | [
"streptococcus faecalis (enterococcus faecalis)",
"enterococcus faecalis (streptococcus glycerinaceus)"
] | [
"streptococcus cecorum (enterococcus cecorum)",
"enterococcus cecorum (streptococcus cecorum)",
"streptococcus intestinalis (streptococcus alactolyticus)",
"streptococcus alactolyticus (streptococcus intestinalis)"
] | Given the context 'Krogstad DJ, Korfhagen TR, Moellering RC Jr, et al: Aminoglycoside-inactivating enzymes in
clinical isolates of Streptococcusfaecalis: An explanation for resistance to antibiotic synergism.', answer the user's query. |
What is the biomedical concept corresponding to 's. faecium'? | [
"streptococcus faecium (enterococcus faecium)",
"enterococcus faecium (streptococcus faecium)"
] | [
"clostridium faecium",
"sphingobacterium faecium",
"enterenecus faecium (candidatus enterenecus faecium)",
"brachybacterium faecium"
] | Given the context 'J Clin Invest 62:480-486, 1978
S. FAECIUM ENDOCARDITIS 249
12.', answer the user's query. |
What is the biomedical concept corresponding to 'sheep'? | [
"sheep (ovis aries)",
"domestic sheep (ovis aries)",
"wild sheep (ovis aries)",
"lambs (ovis aries)",
"ovis ovis (ovis aries)"
] | [
"bovidae",
"dall sheep (ovis dalli)",
"ovis aries vignei (ovis vignei)",
"ovis dalli (dall's sheep)"
] | Given the context 'Abstract
A recombinant phage, SpC3, containing a 17 kb genomic DNA insert representing approximately 60% of the 3' portion of the sheep collagen alpha 2 gene, was evaluated by electron microscopic R loop analysis.', answer the user's query. |
What is the biomedical concept corresponding to 'sheep'? | [
"sheep (ovis aries)",
"domestic sheep (ovis aries)",
"wild sheep (ovis aries)",
"lambs (ovis aries)",
"ovis ovis (ovis aries)"
] | [
"bovidae",
"dall sheep (ovis dalli)",
"ovis aries vignei (ovis vignei)",
"ovis dalli (dall's sheep)"
] | Given the context 'Images
Nucleic Acids Research
Structural organization of a 17 KB segment of the a2 collagen gene: evaluation by R loop mapping Millie P.Schafer, Charles D.Boyd, Paul Tolstoshev and Ronald G.Crystal
Pulmonary Branch, National Heart, Lung and Blood Institute, National Institutes of Health, Bethesda, MD 20205, USA
Received 13 February 1980
ABSTRACT
A recombinant phage, SpC3, containing a 17 kb genomic DNA insert rep
resenting approximately 60% of the 3' portion of the sheep collagen a2 gene, was evaluated by electron microscopic R loop analysis.', answer the user's query. |
What is the biomedical concept corresponding to 'sheep'? | [
"sheep (ovis aries)",
"domestic sheep (ovis aries)",
"wild sheep (ovis aries)",
"lambs (ovis aries)",
"ovis ovis (ovis aries)"
] | [
"bovidae",
"dall sheep (ovis dalli)",
"ovis aries vignei (ovis vignei)",
"ovis dalli (dall's sheep)"
] | Given the context 'The present study further characterizes this portion of the a2
gene by utilizing electron microscopic R loop analysis to map the coding regions (exons) and intervening sequences (introns) contained within the sheep genomic insert of SpC3.', answer the user's query. |
What is the biomedical concept corresponding to 'sheep'? | [
"sheep (ovis aries)",
"domestic sheep (ovis aries)",
"wild sheep (ovis aries)",
"lambs (ovis aries)",
"ovis ovis (ovis aries)"
] | [
"bovidae",
"dall sheep (ovis dalli)",
"ovis aries vignei (ovis vignei)",
"ovis dalli (dall's sheep)"
] | Given the context 'The sheep a2 collagen recombinant clone, SpC3, containing a portion of the sheep a2 gene, was isolated as previously described (2).', answer the user's query. |
What is the biomedical concept corresponding to 'sheep'? | [
"sheep (ovis aries)",
"domestic sheep (ovis aries)",
"wild sheep (ovis aries)",
"lambs (ovis aries)",
"ovis ovis (ovis aries)"
] | [
"bovidae",
"dall sheep (ovis dalli)",
"ovis aries vignei (ovis vignei)",
"ovis dalli (dall's sheep)"
] | Given the context 'The sheep a2 collagen recombinant clone, SpC3, containing a portion of the sheep a2 gene, was isolated as previously described (2).', answer the user's query. |
What is the biomedical concept corresponding to 'sheep'? | [
"sheep (ovis aries)",
"domestic sheep (ovis aries)",
"wild sheep (ovis aries)",
"lambs (ovis aries)",
"ovis ovis (ovis aries)"
] | [
"bovidae",
"dall sheep (ovis dalli)",
"ovis aries vignei (ovis vignei)",
"ovis dalli (dall's sheep)"
] | Given the context 'Briefly,
high molecular weight fetal sheep liver DNA was extracted by the method of Blin and Stafford (3), and 15-20 kb DNA fragments, resulting from partial Eco RI digestion, were isolated and ligated to the left and right arms of Charon 4A.', answer the user's query. |
What is the biomedical concept corresponding to 'sheep'? | [
"sheep (ovis aries)",
"domestic sheep (ovis aries)",
"wild sheep (ovis aries)",
"lambs (ovis aries)",
"ovis ovis (ovis aries)"
] | [
"bovidae",
"dall sheep (ovis dalli)",
"ovis aries vignei (ovis vignei)",
"ovis dalli (dall's sheep)"
] | Given the context 'The recombinant DNA was then packaged in vitro and the sheep
genomic library amplified (4-6).', answer the user's query. |
What is the biomedical concept corresponding to 'sheep'? | [
"sheep (ovis aries)",
"domestic sheep (ovis aries)",
"wild sheep (ovis aries)",
"lambs (ovis aries)",
"ovis ovis (ovis aries)"
] | [
"bovidae",
"dall sheep (ovis dalli)",
"ovis aries vignei (ovis vignei)",
"ovis dalli (dall's sheep)"
] | Given the context 'Screening of the sheep genomic library was
conducted utilizing [32 P]-labeled fetal sheep tendon type I collagen cDNA and
several positive recombinant phages were isolated.', answer the user's query. |
What is the biomedical concept corresponding to 'sheep'? | [
"sheep (ovis aries)",
"domestic sheep (ovis aries)",
"wild sheep (ovis aries)",
"lambs (ovis aries)",
"ovis ovis (ovis aries)"
] | [
"bovidae",
"dall sheep (ovis dalli)",
"ovis aries vignei (ovis vignei)",
"ovis dalli (dall's sheep)"
] | Given the context 'Screening of the sheep genomic library was
conducted utilizing [32 P]-labeled fetal sheep tendon type I collagen cDNA and
several positive recombinant phages were isolated.', answer the user's query. |
What is the biomedical concept corresponding to 'sheep'? | [
"sheep (ovis aries)",
"domestic sheep (ovis aries)",
"wild sheep (ovis aries)",
"lambs (ovis aries)",
"ovis ovis (ovis aries)"
] | [
"bovidae",
"dall sheep (ovis dalli)",
"ovis aries vignei (ovis vignei)",
"ovis dalli (dall's sheep)"
] | Given the context 'One recombinant, containing a 17 kb sheep genomic insert, was demonstrated to have coding sequences corresponding to 60% of the 3' end of a2 mRNA.', answer the user's query. |
What is the biomedical concept corresponding to 'sheep'? | [
"sheep (ovis aries)",
"domestic sheep (ovis aries)",
"wild sheep (ovis aries)",
"lambs (ovis aries)",
"ovis ovis (ovis aries)"
] | [
"bovidae",
"dall sheep (ovis dalli)",
"ovis aries vignei (ovis vignei)",
"ovis dalli (dall's sheep)"
] | Given the context 'The construction and screening of the sheep genomic library together with amplification of pCg45 and preparation of high titre lysates of chimaeric
Charon 4A were performed under the physical and biological containment levels specified by the NIH guidelines for recombinant DNA research (11).
', answer the user's query. |
What is the biomedical concept corresponding to 'sheep'? | [
"sheep (ovis aries)",
"domestic sheep (ovis aries)",
"wild sheep (ovis aries)",
"lambs (ovis aries)",
"ovis ovis (ovis aries)"
] | [
"bovidae",
"dall sheep (ovis dalli)",
"ovis aries vignei (ovis vignei)",
"ovis dalli (dall's sheep)"
] | Given the context 'Hybridization of fetal sheep tendon type I collagen mRNA to SpC3 DNA
yielded a complex R loop pattern in the region where the sheep genomic insert was expected to be ligated to the arms of the lambda vector, Charon 4A.', answer the user's query. |
What is the biomedical concept corresponding to 'sheep'? | [
"sheep (ovis aries)",
"domestic sheep (ovis aries)",
"wild sheep (ovis aries)",
"lambs (ovis aries)",
"ovis ovis (ovis aries)"
] | [
"bovidae",
"dall sheep (ovis dalli)",
"ovis aries vignei (ovis vignei)",
"ovis dalli (dall's sheep)"
] | Given the context 'Hybridization of fetal sheep tendon type I collagen mRNA to SpC3 DNA
yielded a complex R loop pattern in the region where the sheep genomic insert was expected to be ligated to the arms of the lambda vector, Charon 4A.', answer the user's query. |
What is the biomedical concept corresponding to 'sheep'? | [
"sheep (ovis aries)",
"domestic sheep (ovis aries)",
"wild sheep (ovis aries)",
"lambs (ovis aries)",
"ovis ovis (ovis aries)"
] | [
"bovidae",
"dall sheep (ovis dalli)",
"ovis aries vignei (ovis vignei)",
"ovis dalli (dall's sheep)"
] | Given the context 'To
confirm that these hybridization events were restricted to the inserted sheep DNA fragment, duplex DNA strands on both sides of this hybridization area were measured.', answer the user's query. |
What is the biomedical concept corresponding to 'sheep'? | [
"sheep (ovis aries)",
"domestic sheep (ovis aries)",
"wild sheep (ovis aries)",
"lambs (ovis aries)",
"ovis ovis (ovis aries)"
] | [
"bovidae",
"dall sheep (ovis dalli)",
"ovis aries vignei (ovis vignei)",
"ovis dalli (dall's sheep)"
] | Given the context 'Although, by convention, introns are usually sequentially labeled 5' to 3', an opposite order had to be employed in this case as SpC3 does not contain the sequences coding for the 5' end of sheep a2 mRNA.', answer the user's query. |
What is the biomedical concept corresponding to 'sheep'? | [
"sheep (ovis aries)",
"domestic sheep (ovis aries)",
"wild sheep (ovis aries)",
"lambs (ovis aries)",
"ovis ovis (ovis aries)"
] | [
"bovidae",
"dall sheep (ovis dalli)",
"ovis aries vignei (ovis vignei)",
"ovis dalli (dall's sheep)"
] | Given the context 'A small non-hybridized tail was consistently found in the region where
the right arm of the phage was ligated to the sheep genomic insert (Figure 1).', answer the user's query. |
What is the biomedical concept corresponding to 'sheep'? | [
"sheep (ovis aries)",
"domestic sheep (ovis aries)",
"wild sheep (ovis aries)",
"lambs (ovis aries)",
"ovis ovis (ovis aries)"
] | [
"bovidae",
"dall sheep (ovis dalli)",
"ovis aries vignei (ovis vignei)",
"ovis dalli (dall's sheep)"
] | Given the context 'Electron microscopic visualization of all 17 introns and 18 exons
from hybrid molecules formed between recombinant clone SpC3 DNA and fetal sheep
tendon a2 mRNA.', answer the user's query. |
What is the biomedical concept corresponding to 'sheep'? | [
"sheep (ovis aries)",
"domestic sheep (ovis aries)",
"wild sheep (ovis aries)",
"lambs (ovis aries)",
"ovis ovis (ovis aries)"
] | [
"bovidae",
"dall sheep (ovis dalli)",
"ovis aries vignei (ovis vignei)",
"ovis dalli (dall's sheep)"
] | Given the context 'Electron microscopic R loop analysis
present in SpC3 DNA1.
of the sheep a2 introns
SpC3 was hybridized to sheep a2 mRNA as described in Materials and Methods; intron lengths were determined by comparison with *X-174 DNA lengths.
', answer the user's query. |
What is the biomedical concept corresponding to 'sheep'? | [
"sheep (ovis aries)",
"domestic sheep (ovis aries)",
"wild sheep (ovis aries)",
"lambs (ovis aries)",
"ovis ovis (ovis aries)"
] | [
"bovidae",
"dall sheep (ovis dalli)",
"ovis aries vignei (ovis vignei)",
"ovis dalli (dall's sheep)"
] | Given the context 'Electron microscopic R loop analysis
present in SpC3 DNA1.
of the sheep a2 introns
SpC3 was hybridized to sheep a2 mRNA as described in Materials and Methods; intron lengths were determined by comparison with *X-174 DNA lengths.
', answer the user's query. |
What is the biomedical concept corresponding to 'sheep'? | [
"sheep (ovis aries)",
"domestic sheep (ovis aries)",
"wild sheep (ovis aries)",
"lambs (ovis aries)",
"ovis ovis (ovis aries)"
] | [
"bovidae",
"dall sheep (ovis dalli)",
"ovis aries vignei (ovis vignei)",
"ovis dalli (dall's sheep)"
] | Given the context 'Electron microscopic R loop analysis of the sheep a2 exons
present in SpC3 DNA1.
', answer the user's query. |
What is the biomedical concept corresponding to 'sheep'? | [
"sheep (ovis aries)",
"domestic sheep (ovis aries)",
"wild sheep (ovis aries)",
"lambs (ovis aries)",
"ovis ovis (ovis aries)"
] | [
"bovidae",
"dall sheep (ovis dalli)",
"ovis aries vignei (ovis vignei)",
"ovis dalli (dall's sheep)"
] | Given the context '36 q5 - _ 33 130?47 r5 r 6 78?36
SpC3 was hybridized to sheep a2 mRNA as described in M4aterials and
Methods; exon lengths were determined by comparison with pBR322 DNA lengths.
', answer the user's query. |
What is the biomedical concept corresponding to 'sheep'? | [
"sheep (ovis aries)",
"domestic sheep (ovis aries)",
"wild sheep (ovis aries)",
"lambs (ovis aries)",
"ovis ovis (ovis aries)"
] | [
"bovidae",
"dall sheep (ovis dalli)",
"ovis aries vignei (ovis vignei)",
"ovis dalli (dall's sheep)"
] | Given the context 'The largest exon, "a", located on the extreme 3' end of the sheep genomic insert, contained
approximately 800 bp.', answer the user's query. |
What is the biomedical concept corresponding to 'sheep'? | [
"sheep (ovis aries)",
"domestic sheep (ovis aries)",
"wild sheep (ovis aries)",
"lambs (ovis aries)",
"ovis ovis (ovis aries)"
] | [
"bovidae",
"dall sheep (ovis dalli)",
"ovis aries vignei (ovis vignei)",
"ovis dalli (dall's sheep)"
] | Given the context 'Exon "a" and exon "b", the two exons situated on either side of intron 1, coded for around 1000 bases of a2 collagen information; these two
exons contained one-third of the mapped 3,014 DNA bases complementary to a2 mRNA Length distribution and organization of the introns and exons in the sheep genomi c i nsert.
', answer the user's query. |
What is the biomedical concept corresponding to 'sheep'? | [
"sheep (ovis aries)",
"domestic sheep (ovis aries)",
"wild sheep (ovis aries)",
"lambs (ovis aries)",
"ovis ovis (ovis aries)"
] | [
"bovidae",
"dall sheep (ovis dalli)",
"ovis aries vignei (ovis vignei)",
"ovis dalli (dall's sheep)"
] | Given the context 'Therefore, only 18% of the mapped 17 kb sheep genetic insert actually contained a2 structural information.
', answer the user's query. |
What is the biomedical concept corresponding to 'sheep'? | [
"sheep (ovis aries)",
"domestic sheep (ovis aries)",
"wild sheep (ovis aries)",
"lambs (ovis aries)",
"ovis ovis (ovis aries)"
] | [
"bovidae",
"dall sheep (ovis dalli)",
"ovis aries vignei (ovis vignei)",
"ovis dalli (dall's sheep)"
] | Given the context 'A minimum of 17 introns interrupt the 3 kb of ca2 genetic information interspersed as 18 exons over 17 kb of sheep DNA.', answer the user's query. |
What is the biomedical concept corresponding to 'sheep'? | [
"sheep (ovis aries)",
"domestic sheep (ovis aries)",
"wild sheep (ovis aries)",
"lambs (ovis aries)",
"ovis ovis (ovis aries)"
] | [
"bovidae",
"dall sheep (ovis dalli)",
"ovis aries vignei (ovis vignei)",
"ovis dalli (dall's sheep)"
] | Given the context 'Although the total number of introns present within the 60% 3' portion
of the a2 sheep gene was determined to be 17, variation in the precise number
TRANSRIPTlO
', answer the user's query. |
What is the biomedical concept corresponding to 'sheep'? | [
"sheep (ovis aries)",
"domestic sheep (ovis aries)",
"wild sheep (ovis aries)",
"lambs (ovis aries)",
"ovis ovis (ovis aries)"
] | [
"bovidae",
"dall sheep (ovis dalli)",
"ovis aries vignei (ovis vignei)",
"ovis dalli (dall's sheep)"
] | Given the context '5.5 50 4.5 4.0 3.5 3.0 2.5 2.0 1.5 1.0
KILOBASE
Fiue3 Organization of 60% of the 3' end of the sheep a2 collagen gene.', answer the user's query. |
What is the biomedical concept corresponding to 'sheep'? | [
"sheep (ovis aries)",
"domestic sheep (ovis aries)",
"wild sheep (ovis aries)",
"lambs (ovis aries)",
"ovis ovis (ovis aries)"
] | [
"bovidae",
"dall sheep (ovis dalli)",
"ovis aries vignei (ovis vignei)",
"ovis dalli (dall's sheep)"
] | Given the context 'Very small introns have been reported for tRNA genes (12,13),
and it will be necessary to sequence these regions of SpC3 to determine if such introns are present within the a2 sheep genome.
', answer the user's query. |
What is the biomedical concept corresponding to 'adenovirus'? | [
"adenoviridae"
] | [
"adenovirus (unidentified adenovirus)",
"adeno-associated virus",
"human adenovirus (human adenovirus sp.)",
"unidentified adenovirus (adenovirus)"
] | Given the context 'The existence of mRNAs comprised of sequences complementary to noncontiguous regions in a DNA genome was first described for adenovirus (14,15) and
simian virus (16,17) genes.', answer the user's query. |
What is the biomedical concept corresponding to 'sheep'? | [
"sheep (ovis aries)",
"domestic sheep (ovis aries)",
"wild sheep (ovis aries)",
"lambs (ovis aries)",
"ovis ovis (ovis aries)"
] | [
"bovidae",
"dall sheep (ovis dalli)",
"ovis aries vignei (ovis vignei)",
"ovis dalli (dall's sheep)"
] | Given the context 'The consistent appearance of a small non-hybridized tail, approximately 100 nucleotides in length, in the region where the right arm of the phage was ligated to the sheep genomic insert of SpC3 very likely corresponded to the
3' poly A sequence of the a2 mRNA.', answer the user's query. |
What is the biomedical concept corresponding to 'child'? | [
"human (homo sapiens)",
"homo sapiens (human)"
] | [
"neonetus",
"genus",
"this",
"humans (homo)"
] | Given the context 'We are also grateful to Margery Sullivan, Laboratory of Molecular Genetics,
National Institute of Child Health and Human Development, for helpful discussions and to Dr. Helga Boedtker, Department of Chemistry, Harvard University, for making available the recombinant plasmid pCg45.
', answer the user's query. |
What is the biomedical concept corresponding to 'human'? | [
"human (homo sapiens)",
"homo sapiens (human)"
] | [
"humans (homo)",
"homo (humans)",
"kingdom",
"genus"
] | Given the context 'We are also grateful to Margery Sullivan, Laboratory of Molecular Genetics,
National Institute of Child Health and Human Development, for helpful discussions and to Dr. Helga Boedtker, Department of Chemistry, Harvard University, for making available the recombinant plasmid pCg45.
', answer the user's query. |
What is the biomedical concept corresponding to 'yeast'? | [
"saccharomyces cerevisiae (saccharomyces cerevisiae (desm.) meyen ex e.c. hansen, 1883)",
"saccharomyces cerevisiae (desm.) meyen ex e.c. hansen, 1883 (saccharomyces cerevisiae)",
"baker's yeast (saccharomyces cerevisiae)",
"mycoderma cerevisiae (saccharomyces cerevisiae)",
"brewer's yeast (saccharomyces ce... | [
"true yeasts (saccharomycotina)",
"saccharomyces cerevisiae or paradoxus (saccharomyces cf. cerevisiae/paradoxus)",
"saccharomyces lactis (kluyveromyces lactis)",
"saccharomyces albicans (candida albicans)"
] | Given the context 'Scp160p, a multiple KH-domain protein, is a component of mRNP complexes in yeast
Abstract
Scp160p is a 160 kDa protein in the yeast Saccharomyces cerevisiae that contains 14 repeats of the hnRNP K-homology (KH) domain, and demonstrates significant sequence homology to a family of proteins collectively known as vigilins.', answer the user's query. |
What is the biomedical concept corresponding to 'yeast'? | [
"saccharomyces cerevisiae (saccharomyces cerevisiae (desm.) meyen ex e.c. hansen, 1883)",
"saccharomyces cerevisiae (desm.) meyen ex e.c. hansen, 1883 (saccharomyces cerevisiae)",
"baker's yeast (saccharomyces cerevisiae)",
"mycoderma cerevisiae (saccharomyces cerevisiae)",
"brewer's yeast (saccharomyces ce... | [
"true yeasts (saccharomycotina)",
"saccharomyces cerevisiae or paradoxus (saccharomyces cf. cerevisiae/paradoxus)",
"saccharomyces lactis (kluyveromyces lactis)",
"saccharomyces albicans (candida albicans)"
] | Given the context 'Scp160p, a multiple KH-domain protein, is a component of mRNP complexes in yeast
Abstract
Scp160p is a 160 kDa protein in the yeast Saccharomyces cerevisiae that contains 14 repeats of the hnRNP K-homology (KH) domain, and demonstrates significant sequence homology to a family of proteins collectively known as vigilins.', answer the user's query. |
What is the biomedical concept corresponding to 'saccharomyces cerevisiae'? | [
"saccharomyces cerevisiae (saccharomyces cerevisiae (desm.) meyen ex e.c. hansen, 1883)",
"saccharomyces cerevisiae (desm.) meyen ex e.c. hansen, 1883 (saccharomyces cerevisiae)",
"baker's yeast (saccharomyces cerevisiae)",
"mycoderma cerevisiae (saccharomyces cerevisiae)",
"brewer's yeast (saccharomyces ce... | [
"saccharomyces lactis (kluyveromyces lactis)",
"saccharomyces cf. cerevisiae",
"saccharomyces cerevisiae or paradoxus (saccharomyces cf. cerevisiae/paradoxus)",
"saccharomyces hansenii (debaryomyces hansenii)"
] | Given the context 'Scp160p, a multiple KH-domain protein, is a component of mRNP complexes in yeast
Abstract
Scp160p is a 160 kDa protein in the yeast Saccharomyces cerevisiae that contains 14 repeats of the hnRNP K-homology (KH) domain, and demonstrates significant sequence homology to a family of proteins collectively known as vigilins.', answer the user's query. |
What is the biomedical concept corresponding to 'yeast'? | [
"saccharomyces cerevisiae (saccharomyces cerevisiae (desm.) meyen ex e.c. hansen, 1883)",
"saccharomyces cerevisiae (desm.) meyen ex e.c. hansen, 1883 (saccharomyces cerevisiae)",
"baker's yeast (saccharomyces cerevisiae)",
"mycoderma cerevisiae (saccharomyces cerevisiae)",
"brewer's yeast (saccharomyces ce... | [
"true yeasts (saccharomycotina)",
"saccharomyces cerevisiae or paradoxus (saccharomyces cf. cerevisiae/paradoxus)",
"saccharomyces lactis (kluyveromyces lactis)",
"saccharomyces albicans (candida albicans)"
] | Given the context 'These results demonstrate that Scp160p associates with polyribosome-bound mRNP complexes in vivo, implicating a role for this protein in one or more levels of mRNA metabolism in yeast.
', answer the user's query. |
What is the biomedical concept corresponding to 'saccharomyces cerevisiae'? | [
"saccharomyces cerevisiae (saccharomyces cerevisiae (desm.) meyen ex e.c. hansen, 1883)",
"saccharomyces cerevisiae (desm.) meyen ex e.c. hansen, 1883 (saccharomyces cerevisiae)",
"baker's yeast (saccharomyces cerevisiae)",
"mycoderma cerevisiae (saccharomyces cerevisiae)",
"brewer's yeast (saccharomyces ce... | [
"saccharomyces lactis (kluyveromyces lactis)",
"saccharomyces cf. cerevisiae",
"saccharomyces cerevisiae or paradoxus (saccharomyces cf. cerevisiae/paradoxus)",
"saccharomyces hansenii (debaryomyces hansenii)"
] | Given the context 'INTRODUCTION
Scp160p is a 1222 amino acid Saccharomyces cerevisiae protein that contains 14 copies of the hnRNP K homology (KH) domain, a highly conserved motif found in many proteins involved in RNA metabolism (1).', answer the user's query. |
What is the biomedical concept corresponding to 'escherichia coli'? | [
"e. coli (escherichia coli)",
"bacterium coli (escherichia coli)",
"bacillus coli (escherichia coli)",
"escherichia coli (escherichia/shigella coli)",
"enterococcus coli (escherichia coli)"
] | [
"escherichia",
"escherichia faecalis ('escherichia faecalis')",
"enterobacteria (enterobacteriaceae)",
"escherichia sp."
] | Given the context 'KH domain-containing proteins appear to have diverse functions and have been identified in all kingdoms of life, including the ribosomal protein S3 from Escherichia coli (1), Mer1p from S.cerevisiae, a meiosis-specific splicing factor (1), MEX-3 from Caenorhabditis elegans, presumably involved in mRNA localization during development (2), and FMRP, the fragile-X mental retardation protein in humans (3).', answer the user's query. |
What is the biomedical concept corresponding to 's.cerevisiae'? | [
"saccharomyces cerevisiae (saccharomyces cerevisiae (desm.) meyen ex e.c. hansen, 1883)",
"saccharomyces cerevisiae (desm.) meyen ex e.c. hansen, 1883 (saccharomyces cerevisiae)",
"baker's yeast (saccharomyces cerevisiae)",
"mycoderma cerevisiae (saccharomyces cerevisiae)",
"brewer's yeast (saccharomyces ce... | [
"saccharomyces cerevisiae or paradoxus (saccharomyces cf. cerevisiae/paradoxus)",
"saccharomyces lactis (kluyveromyces lactis)",
"saccharomyces cf. cerevisiae",
"saccharomyces hansenii (debaryomyces hansenii)"
] | Given the context 'KH domain-containing proteins appear to have diverse functions and have been identified in all kingdoms of life, including the ribosomal protein S3 from Escherichia coli (1), Mer1p from S.cerevisiae, a meiosis-specific splicing factor (1), MEX-3 from Caenorhabditis elegans, presumably involved in mRNA localization during development (2), and FMRP, the fragile-X mental retardation protein in humans (3).', answer the user's query. |
What is the biomedical concept corresponding to 'caenorhabditis elegans'? | [
"caenorhabditis elegans (rhabditis elegans)",
"rhabditis elegans (caenorhabditis elegans)"
] | [
"caenorhabditis",
"drosophila elegans",
"caenorhabditis sp.",
"elegans subgroup (in: flies)"
] | Given the context 'KH domain-containing proteins appear to have diverse functions and have been identified in all kingdoms of life, including the ribosomal protein S3 from Escherichia coli (1), Mer1p from S.cerevisiae, a meiosis-specific splicing factor (1), MEX-3 from Caenorhabditis elegans, presumably involved in mRNA localization during development (2), and FMRP, the fragile-X mental retardation protein in humans (3).', answer the user's query. |
What is the biomedical concept corresponding to 'humans'? | [
"human (homo sapiens)",
"homo sapiens (human)"
] | [
"humans (homo)",
"homo (humans)",
"primate (primates)",
"macrobiotus sapiens"
] | Given the context 'KH domain-containing proteins appear to have diverse functions and have been identified in all kingdoms of life, including the ribosomal protein S3 from Escherichia coli (1), Mer1p from S.cerevisiae, a meiosis-specific splicing factor (1), MEX-3 from Caenorhabditis elegans, presumably involved in mRNA localization during development (2), and FMRP, the fragile-X mental retardation protein in humans (3).', answer the user's query. |
What is the biomedical concept corresponding to 'yeast'? | [
"saccharomyces cerevisiae (saccharomyces cerevisiae (desm.) meyen ex e.c. hansen, 1883)",
"saccharomyces cerevisiae (desm.) meyen ex e.c. hansen, 1883 (saccharomyces cerevisiae)",
"baker's yeast (saccharomyces cerevisiae)",
"mycoderma cerevisiae (saccharomyces cerevisiae)",
"brewer's yeast (saccharomyces ce... | [
"true yeasts (saccharomycotina)",
"saccharomyces cerevisiae or paradoxus (saccharomyces cf. cerevisiae/paradoxus)",
"saccharomyces lactis (kluyveromyces lactis)",
"saccharomyces albicans (candida albicans)"
] | Given the context 'Deletion of the SCP160 locus in yeast is not lethal, but results in a complex phenotype, including increased DNA content per cell, missegregation of genetic markers during sporulation, and abnormal cell morphology, including increased size and irregular shape (4).', answer the user's query. |
What is the biomedical concept corresponding to 'chicken'? | [
"chicken (gallus gallus)",
"chickens (gallus gallus)",
"gallus gallus (gallus gallus domesticus)",
"gallus domesticus (gallus gallus)",
"gallus gallus domesticus (gallus gallus)"
] | [
"gallus",
"gallus gallus gallus (gallus gallus philippensis)",
"gallus sp.",
"landfowls (galliformes)"
] | Given the context 'First identified in chicken, vigilin homologues have now been found in human (6), Xenopus laevis (7), Drosophila melanogaster (8), C.elegans (5) and Schizosaccharomyces pombe.', answer the user's query. |
What is the biomedical concept corresponding to 'human'? | [
"human (homo sapiens)",
"homo sapiens (human)"
] | [
"humans (homo)",
"homo (humans)",
"kingdom",
"genus"
] | Given the context 'First identified in chicken, vigilin homologues have now been found in human (6), Xenopus laevis (7), Drosophila melanogaster (8), C.elegans (5) and Schizosaccharomyces pombe.', answer the user's query. |
What is the biomedical concept corresponding to 'xenopus laevis'? | [
"xenopus laevis (african clawed frog)",
"african clawed frog (xenopus laevis)",
"platanna (xenopus laevis)",
"clawed frog (xenopus laevis)",
"common platanna (xenopus laevis)"
] | [
"xenopus (xenopus <genus>)",
"xenopus (xenopus <subgenus>)",
"xenopus <genus> (xenopus)",
"xenopus <subgenus> (xenopus)"
] | Given the context 'First identified in chicken, vigilin homologues have now been found in human (6), Xenopus laevis (7), Drosophila melanogaster (8), C.elegans (5) and Schizosaccharomyces pombe.', answer the user's query. |
What is the biomedical concept corresponding to 'drosophila melanogaster'? | [
"fruit fly (drosophila melanogaster)",
"drosophila melanogaster (sophophora melanogaster)"
] | [
"drosophila (drosophila <flies,genus>)",
"drosophila (drosophila <basidiomycete fungi>)",
"drosophila <flies,subgenus> (drosophila)",
"drosophila <basidiomycete fungi> (drosophila)"
] | Given the context 'First identified in chicken, vigilin homologues have now been found in human (6), Xenopus laevis (7), Drosophila melanogaster (8), C.elegans (5) and Schizosaccharomyces pombe.', answer the user's query. |
What is the biomedical concept corresponding to 'c.elegans'? | [
"caenorhabditis elegans (rhabditis elegans)",
"rhabditis elegans (caenorhabditis elegans)"
] | [
"elegans subgroup (in: flies)",
"caenorhabditis",
"drosophila elegans",
"elegans subgroup (in: mosquitos)"
] | Given the context 'First identified in chicken, vigilin homologues have now been found in human (6), Xenopus laevis (7), Drosophila melanogaster (8), C.elegans (5) and Schizosaccharomyces pombe.', answer the user's query. |
What is the biomedical concept corresponding to 'schizosaccharomyces pombe'? | [
"fission yeast (schizosaccharomyces pombe)",
"schizosaccharomyces pombe (schizosaccharomyces malidevorans)"
] | [
"schizosaccharomyces",
"fission yeasts (schizosaccharomycetaceae)",
"schizosaccharomyces sp.",
"zygosaccharomyces"
] | Given the context 'First identified in chicken, vigilin homologues have now been found in human (6), Xenopus laevis (7), Drosophila melanogaster (8), C.elegans (5) and Schizosaccharomyces pombe.', answer the user's query. |
What is the biomedical concept corresponding to 'human'? | [
"human (homo sapiens)",
"homo sapiens (human)"
] | [
"humans (homo)",
"homo (humans)",
"kingdom",
"genus"
] | Given the context 'For example, Kruse and colleagues reported from their work with human cells in culture that vigilin may be involved in the binding and transport of tRNA (9–11).', answer the user's query. |
What is the biomedical concept corresponding to 'yeast'? | [
"saccharomyces cerevisiae (saccharomyces cerevisiae (desm.) meyen ex e.c. hansen, 1883)",
"saccharomyces cerevisiae (desm.) meyen ex e.c. hansen, 1883 (saccharomyces cerevisiae)",
"baker's yeast (saccharomyces cerevisiae)",
"mycoderma cerevisiae (saccharomyces cerevisiae)",
"brewer's yeast (saccharomyces ce... | [
"true yeasts (saccharomycotina)",
"saccharomyces cerevisiae or paradoxus (saccharomyces cf. cerevisiae/paradoxus)",
"saccharomyces lactis (kluyveromyces lactis)",
"saccharomyces albicans (candida albicans)"
] | Given the context 'The goal of the present study was to begin elucidating the function of Scp160p in yeast by characterizing the subcellular distribution and macromolecular interactions of this protein.', answer the user's query. |
What is the biomedical concept corresponding to 'yeast'? | [
"saccharomyces cerevisiae (saccharomyces cerevisiae (desm.) meyen ex e.c. hansen, 1883)",
"saccharomyces cerevisiae (desm.) meyen ex e.c. hansen, 1883 (saccharomyces cerevisiae)",
"baker's yeast (saccharomyces cerevisiae)",
"mycoderma cerevisiae (saccharomyces cerevisiae)",
"brewer's yeast (saccharomyces ce... | [
"true yeasts (saccharomycotina)",
"saccharomyces cerevisiae or paradoxus (saccharomyces cf. cerevisiae/paradoxus)",
"saccharomyces lactis (kluyveromyces lactis)",
"saccharomyces albicans (candida albicans)"
] | Given the context 'These results indicate a role for Scp160p in mRNA metabolism in yeast, and by extension, support results seen with Xenopus vigilin in its interactions with mRNA.', answer the user's query. |
What is the biomedical concept corresponding to 'yeast'? | [
"saccharomyces cerevisiae (saccharomyces cerevisiae (desm.) meyen ex e.c. hansen, 1883)",
"saccharomyces cerevisiae (desm.) meyen ex e.c. hansen, 1883 (saccharomyces cerevisiae)",
"baker's yeast (saccharomyces cerevisiae)",
"mycoderma cerevisiae (saccharomyces cerevisiae)",
"brewer's yeast (saccharomyces ce... | [
"true yeasts (saccharomycotina)",
"saccharomyces cerevisiae or paradoxus (saccharomyces cf. cerevisiae/paradoxus)",
"saccharomyces lactis (kluyveromyces lactis)",
"saccharomyces albicans (candida albicans)"
] | Given the context 'To our knowledge, the data reported here demonstrate Scp160p to be the first example of a KH-domain protein that functions as a component of polyribosome-associated mRNP complexes in the yeast, S.cerevisiae.
MATERIALS AND METHODS
Plasmids, yeast strains and culture conditions
All recombinant DNA manipulations were performed according to standard techniques and utilized E.coli strain XL1-Blue (Stratagene).', answer the user's query. |
What is the biomedical concept corresponding to 's.cerevisiae'? | [
"saccharomyces cerevisiae (saccharomyces cerevisiae (desm.) meyen ex e.c. hansen, 1883)",
"saccharomyces cerevisiae (desm.) meyen ex e.c. hansen, 1883 (saccharomyces cerevisiae)",
"baker's yeast (saccharomyces cerevisiae)",
"mycoderma cerevisiae (saccharomyces cerevisiae)",
"brewer's yeast (saccharomyces ce... | [
"saccharomyces cerevisiae or paradoxus (saccharomyces cf. cerevisiae/paradoxus)",
"saccharomyces lactis (kluyveromyces lactis)",
"saccharomyces cf. cerevisiae",
"saccharomyces hansenii (debaryomyces hansenii)"
] | Given the context 'To our knowledge, the data reported here demonstrate Scp160p to be the first example of a KH-domain protein that functions as a component of polyribosome-associated mRNP complexes in the yeast, S.cerevisiae.
MATERIALS AND METHODS
Plasmids, yeast strains and culture conditions
All recombinant DNA manipulations were performed according to standard techniques and utilized E.coli strain XL1-Blue (Stratagene).', answer the user's query. |
What is the biomedical concept corresponding to 'yeast'? | [
"saccharomyces cerevisiae (saccharomyces cerevisiae (desm.) meyen ex e.c. hansen, 1883)",
"saccharomyces cerevisiae (desm.) meyen ex e.c. hansen, 1883 (saccharomyces cerevisiae)",
"baker's yeast (saccharomyces cerevisiae)",
"mycoderma cerevisiae (saccharomyces cerevisiae)",
"brewer's yeast (saccharomyces ce... | [
"true yeasts (saccharomycotina)",
"saccharomyces cerevisiae or paradoxus (saccharomyces cf. cerevisiae/paradoxus)",
"saccharomyces lactis (kluyveromyces lactis)",
"saccharomyces albicans (candida albicans)"
] | Given the context 'To our knowledge, the data reported here demonstrate Scp160p to be the first example of a KH-domain protein that functions as a component of polyribosome-associated mRNP complexes in the yeast, S.cerevisiae.
MATERIALS AND METHODS
Plasmids, yeast strains and culture conditions
All recombinant DNA manipulations were performed according to standard techniques and utilized E.coli strain XL1-Blue (Stratagene).', answer the user's query. |
What is the biomedical concept corresponding to 'e.coli'? | [
"e. coli (escherichia coli)",
"bacterium coli (escherichia coli)",
"bacillus coli (escherichia coli)",
"escherichia coli (escherichia/shigella coli)",
"enterococcus coli (escherichia coli)"
] | [
"escherichia",
"escherichia faecalis ('escherichia faecalis')",
"enterobacteria (enterobacteriaceae)",
"'escherichia faecalis' (escherichia faecalis)"
] | Given the context 'To our knowledge, the data reported here demonstrate Scp160p to be the first example of a KH-domain protein that functions as a component of polyribosome-associated mRNP complexes in the yeast, S.cerevisiae.
MATERIALS AND METHODS
Plasmids, yeast strains and culture conditions
All recombinant DNA manipulations were performed according to standard techniques and utilized E.coli strain XL1-Blue (Stratagene).', answer the user's query. |
What is the biomedical concept corresponding to 'yeast'? | [
"saccharomyces cerevisiae (saccharomyces cerevisiae (desm.) meyen ex e.c. hansen, 1883)",
"saccharomyces cerevisiae (desm.) meyen ex e.c. hansen, 1883 (saccharomyces cerevisiae)",
"baker's yeast (saccharomyces cerevisiae)",
"mycoderma cerevisiae (saccharomyces cerevisiae)",
"brewer's yeast (saccharomyces ce... | [
"true yeasts (saccharomycotina)",
"saccharomyces cerevisiae or paradoxus (saccharomyces cf. cerevisiae/paradoxus)",
"saccharomyces lactis (kluyveromyces lactis)",
"saccharomyces albicans (candida albicans)"
] | Given the context 'The yeast strain JFy1511, expressing FLAG–Scp160p, was derived by two-step gene replacement from strain yJJ52 (MATα gal7Δ102 ura3-52 trp1-289 ade1 lys1 leu2-3, 112; generously donated by Drs Mark Parthun and Judith Jaehning, University of Colorado Health Sciences Center), and confirmed by PCR.', answer the user's query. |
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