instruction stringlengths 225 2.35k | input stringlengths 89 1.5k | response stringclasses 698 values |
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<Instruct>: Given the context 'The group D enterococci include three main species S. faecalis, S. faecium, and S. durans.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [s. faecalis; s. faecium; s. durans]
<Options>: A: bacteroides faecium
B: streptococcus gallinarum (aka enterococcus gallinarum)
C: streptococcus suis
D: enterococcus faecalis (streptococcus glycerinaceus) (aka enterococcus faecalis)
E: enterococcus plantarum
F: sphingobacterium faecium
G: avispirillum faecium (aka candidatus avispirillum faecium)
H: corynebacterium faecium
I: streptococcus fermentans
J: streptococcus viridans ('streptococcus viridans') (aka streptococcus viridans)
K: streptococcus durans (aka enterococcus durans)
L: streptococcus ovis
M: enterococcus cecorum (streptococcus cecorum) (aka enterococcus cecorum)
N: enterococcus
O: enterococcus faecium (streptococcus faecium) (aka enterococcus faecium)
P: None of the above. | [D; O; K] |
<Instruct>: Given the context 'The group D enterococci include three main species S. faecalis, S. faecium, and S. durans.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [s. faecalis; s. faecium; s. durans]
<Options>: A: 'staphylococcus faecalis' (aka staphylococcus faecalis)
B: streptococcus humanilactis
C: streptococcus vulneris
D: escherichia faecalis ('escherichia faecalis') (aka escherichia faecalis)
E: streptococcus equisimilis (aka streptococcus dysgalactiae subsp. equisimilis)
F: enterenecus faecium (aka candidatus enterenecus faecium)
G: enterococcus
H: streptococcus infantis
I: enterococcus faecium e155
J: enterococcus proteiformis (aka enterococcus faecalis)
K: streptococcus durans (aka enterococcus durans)
L: enterococcus faecium (streptococcus faecium) (aka enterococcus faecium)
M: avispirillum faecium (aka candidatus avispirillum faecium)
N: staphylococcus faecalis ('staphylococcus faecalis') (aka staphylococcus faecalis)
O: None of the above. | [J; L; K] |
<Instruct>: Given the context 'The group D enterococci include three main species S. faecalis, S. faecium, and S. durans.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [s. faecalis; s. faecium; s. durans]
<Options>: A: enterococcus faecium (streptococcus faecium) (aka enterococcus faecium)
B: enterococcus coli (aka escherichia coli)
C: staphylococcus faecalis ('staphylococcus faecalis') (aka staphylococcus faecalis)
D: streptococcus cecorum (aka enterococcus cecorum)
E: bacteroides faecium
F: streptococcus vulneris
G: enterococcus faecium e155
H: enterocoque (aka enterococcus faecalis)
I: streptococcus anginosus subsp. anginosus
J: streptococcus equisimilis (aka streptococcus dysgalactiae subsp. equisimilis)
K: streptococcus hominis
L: streptococcus durans (aka enterococcus durans)
M: corynebacterium faecium
N: None of the above. | [H; A; L] |
<Instruct>: Given the context 'S. faecium cause a minority of all cases of enterococcal endocarditis, in those instances in which enterococci have been speciated [3], but they have been more resistant both to penicillin and penicillin-aminoglycoside combinations than S. faecalis [4,5,6].
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [s. faecium; s. faecalis]
<Options>: A: streptococcus cecorum (aka enterococcus cecorum)
B: enterococcus faecium e155
C: enterococcus coli (aka escherichia coli)
D: streptococcus faecium (aka enterococcus faecium)
E: streptococcus mutans
F: bacteroides faecium
G: streptococcus liquefaciens (aka enterococcus faecalis)
H: enterococcus
I: enterococcus proteiformis (aka enterococcus faecalis)
J: None of the above. | [D; G] |
<Instruct>: Given the context 'S. faecium cause a minority of all cases of enterococcal endocarditis, in those instances in which enterococci have been speciated [3], but they have been more resistant both to penicillin and penicillin-aminoglycoside combinations than S. faecalis [4,5,6].
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [s. faecium; s. faecalis]
<Options>: A: sphingobacterium faecium
B: enterococcus
C: enterococcus florum
D: bacteroides faecium
E: enterococcus coli (aka escherichia coli)
F: enterococcus faecium (streptococcus faecium) (aka enterococcus faecium)
G: enterococcus gallinarum (streptococcus gallinarum) (aka enterococcus gallinarum)
H: clostridium faecium
I: enterococcus proteiformis (aka enterococcus faecalis)
J: 'staphylococcus faecalis' (aka staphylococcus faecalis)
K: None of the above. | [F; I] |
<Instruct>: Given the context 'We describe a 64-year-old man with S. faecium endocarditis in whom a six-week course of ampicillin and tobramycin, followed by additional courses of penicillin and other aminoglycosides, failed to eradicate the organism from the patient's mitral valve.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [man; s. faecium; patient]
<Options>: A: corynebacterium faecium
B: probles
C: circe
D: species
E: enterococcus faecium e155
F: birds (aka aves)
G: enterenecus faecium (aka candidatus enterenecus faecium)
H: enterococcus faecium (streptococcus faecium) (aka enterococcus faecium)
I: isolate
J: homo sapiens (human) (aka homo sapiens)
K: enterococcus hirae
L: macrobiotus sapiens
M: None of the above. | [J; H; J] |
<Instruct>: Given the context 'We describe a 64-year-old man with S. faecium endocarditis in whom a six-week course of ampicillin and tobramycin, followed by additional courses of penicillin and other aminoglycosides, failed to eradicate the organism from the patient's mitral valve.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [man; s. faecium; patient]
<Options>: A: avispirillum faecium (aka candidatus avispirillum faecium)
B: staphylococcus faecalis ('staphylococcus faecalis') (aka staphylococcus faecalis)
C: kingdom
D: streptococcus faecium (aka enterococcus faecium)
E: homo sapiens (human) (aka homo sapiens)
F: data
G: bacteroides faecium
H: macrobiotus sapiens
I: suborder
J: neanderthal man (aka homo sapiens neanderthalensis)
K: genus
L: enterenecus faecium (aka candidatus enterenecus faecium)
M: mouse (aka mus musculus)
N: this
O: None of the above. | [E; D; E] |
<Instruct>: Given the context 'We describe a 64-year-old man with S. faecium endocarditis in whom a six-week course of ampicillin and tobramycin, followed by additional courses of penicillin and other aminoglycosides, failed to eradicate the organism from the patient's mitral valve.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [man; s. faecium; patient]
<Options>: A: subsection
B: probles
C: enterococcus faecium (streptococcus faecium) (aka enterococcus faecium)
D: avispirillum faecium (aka candidatus avispirillum faecium)
E: species
F: mouse (aka mus musculus)
G: bacteroides faecium
H: macrobiotus sapiens
I: homo sapiens (human) (aka homo sapiens)
J: brachybacterium faecium
K: proxys
L: corynebacterium faecium
M: neanderthal man (aka homo sapiens neanderthalensis)
N: None of the above. | [I; C; I] |
<Instruct>: Given the context 'We describe a 64-year-old man with S. faecium endocarditis in whom a six-week course of ampicillin and tobramycin, followed by additional courses of penicillin and other aminoglycosides, failed to eradicate the organism from the patient's mitral valve.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [man; s. faecium; patient]
<Options>: A: macrobiotus sapiens
B: bacteroides faecium
C: avispirillum faecium (aka candidatus avispirillum faecium)
D: probles
E: corynebacterium faecium
F: proxys
G: neanderthal man (aka homo sapiens neanderthalensis)
H: subsection
I: mouse (aka mus musculus)
J: species
K: brachybacterium faecium
L: enterococcus faecium (streptococcus faecium) (aka enterococcus faecium)
M: None of the above. | [M; L; M] |
<Instruct>: Given the context 'This case is of interest because therapeutic failure of ampicillin and tobramycin in S. faecium endocarditis has not been reported previously, but might have been predicted on the basis of previous in vitro and in vivo studies [6].', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [s. faecium]
<Options>: A: brachybacterium faecium
B: streptococcus faecium (aka enterococcus faecium)
C: enterococcus hirae
D: enterenecus faecium (aka candidatus enterenecus faecium)
E: enterococcus
F: None of the above. | [B] |
<Instruct>: Given the context 'Although the need for both a penicillin derivative and an aminoglycoside in the therapy of enterococcal endocarditis is widely known, it is important to distinguish between the differing efficacies of penicillin-aminoglycoside combinations for treating various species of enterococci such as S. faecium.
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [s. faecium]
<Options>: A: enterococcus florum
B: streptococcus faecium subsp. casseliflavus (aka enterococcus casseliflavus)
C: corynebacterium faecium
D: clostridium faecium
E: enterococcus faecium (streptococcus faecium) (aka enterococcus faecium)
F: None of the above. | [E] |
<Instruct>: Given the context 'In March 1981, the patient was admitted to his community hospital where evaluation revealed a new apical systolic murmur radiating to the axilla.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [patient]
<Options>: A: cancer
B: data
C: homo sapiens (human) (aka homo sapiens)
D: other (aka unidentified)
E: goes
F: None of the above. | [C] |
<Instruct>: Given the context 'Serum bactericidal titers against the organism, obtained during peak antibiotic levels, were 1:8 or greater on several occasions, and blood cultures were negative while the patient was receiving antibiotics.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [patient]
<Options>: A: humans (aka homo)
B: probles
C: aides
D: data
E: homo sapiens (human) (aka homo sapiens)
F: None of the above. | [E] |
<Instruct>: Given the context 'Three separate morphologic colony variants were isolated from blood, each identified as S. faecium by Dr. R.R. Facklam (Center for Disease Control, Atlanta, Georgia).', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [s. faecium]
<Options>: A: enterococcus casseliflavus (streptococcus faecium subsp. casseliflavus) (aka enterococcus casseliflavus)
B: enterococcus faecium e155
C: enterococcus proteiformis (aka enterococcus faecalis)
D: enterococcus faecium (streptococcus faecium) (aka enterococcus faecium)
E: corynebacterium faecium
F: None of the above. | [D] |
<Instruct>: Given the context 'The patient received intravenous penicillin (20 million units per day) and gentamicin (3 mg per kg per day) for six weeks with improvement.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [patient]
<Options>: A: proxys
B: homo sapiens (human) (aka homo sapiens)
C: humans (aka homo)
D: genus
E: goes
F: None of the above. | [B] |
<Instruct>: Given the context 'Multiple blood cultures taken while the patient was receiving antibiotics were negative, as were those obtained 48 and 72 hours after discontinuation of antibiotics.
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [patient]
<Options>: A: goes
B: data
C: human (aka homo sapiens)
D: cancer
E: species
F: None of the above. | [C] |
<Instruct>: Given the context '244
S. FAECIUM ENDOCARDITIS
Third Admission (August 12-October 4, 1981)
Withing a week following discharge, the patient again developed fever, nocturnal sweats, and malaise.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [s. faecium; patient]
<Options>: A: clostridium faecium
B: streptococcus faecium (aka enterococcus faecium)
C: human (aka homo sapiens)
D: other (aka unidentified)
E: enterococcus
F: avispirillum faecium (aka candidatus avispirillum faecium)
G: streptococcus faecalis (aka enterococcus faecalis)
H: circe
I: species
J: genus
K: None of the above. | [B; C] |
<Instruct>: Given the context '244
S. FAECIUM ENDOCARDITIS
Third Admission (August 12-October 4, 1981)
Withing a week following discharge, the patient again developed fever, nocturnal sweats, and malaise.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [s. faecium; patient]
<Options>: A: 'staphylococcus faecalis' (aka staphylococcus faecalis)
B: cancer
C: avispirillum faecium (aka candidatus avispirillum faecium)
D: streptococcus faecium (aka enterococcus faecium)
E: enterococcus hirae
F: probles
G: enterococcus
H: homo sapiens (human) (aka homo sapiens)
I: subsection
J: isolate
K: None of the above. | [D; H] |
<Instruct>: Given the context 'S. faecium (large colony morphotype, and poorly growing small colony morphotype) grew from six sets of blood cultures obtained on admission.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [s. faecium]
<Options>: A: enterococcus proteiformis (aka enterococcus faecalis)
B: enterococcus florum
C: clostridium faecium
D: sphingobacterium faecium
E: enterococcus faecium (streptococcus faecium) (aka enterococcus faecium)
F: None of the above. | [E] |
<Instruct>: Given the context 'The patient underwent mitral valve replacement, receiving a number 31 porcine Hancock bioprosthesis and bypass graft to the midportion of the LAD.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [patient]
<Options>: A: circe
B: data
C: isolate
D: goes
E: human (aka homo sapiens)
F: None of the above. | [E] |
<Instruct>: Given the context 'Bacterial and fungal stains were negative but S. faecium grew from fragments of the resected valve.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [s. faecium]
<Options>: A: enterococcus faecium (streptococcus faecium) (aka enterococcus faecium)
B: avispirillum faecium (aka candidatus avispirillum faecium)
C: enterococcus florum
D: streptococcus faecalis (aka enterococcus faecalis)
E: brachybacterium faecium
F: None of the above. | [A] |
<Instruct>: Given the context 'Following surgery the patient received six additional weeks parenteral penicillin and streptomycin.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [patient]
<Options>: A: genus
B: cancer
C: homo sapiens (human) (aka homo sapiens)
D: other (aka unidentified)
E: suborder
F: None of the above. | [C] |
<Instruct>: Given the context 'The minimum inhibitory and bactericidal concentrations of penicillin, ampicillin, and tobramycin against the S. faecium isolated from the patient's blood cultures
TABLE 1
Minimum Inhibitory and Bactericidal Concentrations of Antibiotics,
Against Streptococcus faecium Isolates from Blood Cultures
Date Penicillin Ampicillin Tobramycin
Organism Isolated MIC MIC MBC MIC MBC S. faecium, prior to ampicillin/
tobramycin therapy 3/17/81 2 1 2 >32 >32 S. faecium, after ampicillin/
tobramycin therapy
a.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [s. faecium; patient; streptococcus faecium]
<Options>: A: probles
B: corynebacterium faecium
C: avispirillum faecium (aka candidatus avispirillum faecium)
D: enterenecus faecium (aka candidatus enterenecus faecium)
E: enterococcus plantarum
F: proxys
G: species
H: homo sapiens (human) (aka homo sapiens)
I: enterococcus hirae
J: enterococcus casseliflavus (streptococcus faecium subsp. casseliflavus) (aka enterococcus casseliflavus)
K: circe
L: enterococcus faecium (streptococcus faecium) (aka enterococcus faecium)
M: enterococcus florum
N: None of the above. | [L; H; L] |
<Instruct>: Given the context 'The minimum inhibitory and bactericidal concentrations of penicillin, ampicillin, and tobramycin against the S. faecium isolated from the patient's blood cultures
TABLE 1
Minimum Inhibitory and Bactericidal Concentrations of Antibiotics,
Against Streptococcus faecium Isolates from Blood Cultures
Date Penicillin Ampicillin Tobramycin
Organism Isolated MIC MIC MBC MIC MBC S. faecium, prior to ampicillin/
tobramycin therapy 3/17/81 2 1 2 >32 >32 S. faecium, after ampicillin/
tobramycin therapy
a.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [s. faecium; patient; streptococcus faecium]
<Options>: A: enterococcus durans (streptococcus durans) (aka enterococcus durans)
B: sphingobacterium faecium
C: enterococcus faecalis (streptococcus glycerinaceus) (aka enterococcus faecalis)
D: enterococcus hirae
E: enterococcus faecium (streptococcus faecium) (aka enterococcus faecium)
F: data
G: enterenecus faecium (aka candidatus enterenecus faecium)
H: humans (aka homo)
I: subsection
J: human (aka homo sapiens)
K: theraps
L: brachybacterium faecium
M: None of the above. | [E; J; E] |
<Instruct>: Given the context 'The minimum inhibitory and bactericidal concentrations of penicillin, ampicillin, and tobramycin against the S. faecium isolated from the patient's blood cultures
TABLE 1
Minimum Inhibitory and Bactericidal Concentrations of Antibiotics,
Against Streptococcus faecium Isolates from Blood Cultures
Date Penicillin Ampicillin Tobramycin
Organism Isolated MIC MIC MBC MIC MBC S. faecium, prior to ampicillin/
tobramycin therapy 3/17/81 2 1 2 >32 >32 S. faecium, after ampicillin/
tobramycin therapy
a.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [s. faecium; patient; streptococcus faecium]
<Options>: A: theraps
B: brachybacterium faecium
C: mouse (aka mus musculus)
D: genus
E: bacteroides faecium
F: enterenecus faecium (aka candidatus enterenecus faecium)
G: avispirillum faecium (aka candidatus avispirillum faecium)
H: streptococcus faecium (aka enterococcus faecium)
I: enterococcus hirae
J: enterococcus
K: streptococcus faecium var. casseliflavus (aka enterococcus casseliflavus)
L: proxys
M: enterococcus faecium e155
N: human (aka homo sapiens)
O: None of the above. | [H; N; H] |
<Instruct>: Given the context 'The minimum inhibitory and bactericidal concentrations of penicillin, ampicillin, and tobramycin against the S. faecium isolated from the patient's blood cultures
TABLE 1
Minimum Inhibitory and Bactericidal Concentrations of Antibiotics,
Against Streptococcus faecium Isolates from Blood Cultures
Date Penicillin Ampicillin Tobramycin
Organism Isolated MIC MIC MBC MIC MBC S. faecium, prior to ampicillin/
tobramycin therapy 3/17/81 2 1 2 >32 >32 S. faecium, after ampicillin/
tobramycin therapy
a.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [s. faecium]
<Options>: A: enterococcus florum
B: avispirillum faecium (aka candidatus avispirillum faecium)
C: enterococcus
D: enterenecus faecium (aka candidatus enterenecus faecium)
E: streptococcus faecium (aka enterococcus faecium)
F: None of the above. | [E] |
<Instruct>: Given the context '3- \ "'' ing the effects of various penicillinO aminoglycoside combinations on S. {73 2- \ >, faecium obtained from the patient's
blood cultures immediately prior to mitral valve excision.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [patient]
<Options>: A: homo sapiens (human) (aka homo sapiens)
B: circe
C: theraps
D: proxys
E: isolate
F: None of the above. | [A] |
<Instruct>: Given the context 'Twenty-four hour time-kill curves for penicillin in combination with various aminoglycosides were performed by Dr. Robert Moellering on the S. faecium isolated from the patient's blood immediately prior to mitral valve excision and replacement (Fig. 1).', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [s. faecium; patient]
<Options>: A: isolate
B: streptococcus faecium (aka enterococcus faecium)
C: streptococcus faecium var. casseliflavus (aka enterococcus casseliflavus)
D: enterococcus hirae
E: suborder
F: homo sapiens (human) (aka homo sapiens)
G: clostridium faecium
H: subsection
I: enterococcus florum
J: theraps
K: None of the above. | [B; F] |
<Instruct>: Given the context 'Twenty-four hour time-kill curves for penicillin in combination with various aminoglycosides were performed by Dr. Robert Moellering on the S. faecium isolated from the patient's blood immediately prior to mitral valve excision and replacement (Fig. 1).', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [s. faecium; patient]
<Options>: A: kingdom
B: this
C: human (aka homo sapiens)
D: enterococcus faecium e155
E: bacteroides faecium
F: enterococcus faecium (streptococcus faecium) (aka enterococcus faecium)
G: streptococcus faecium var. casseliflavus (aka enterococcus casseliflavus)
H: enterenecus faecium (aka candidatus enterenecus faecium)
I: mouse (aka mus musculus)
J: circe
K: None of the above. | [F; C] |
<Instruct>: Given the context 'Twenty-four hour time-kill curves for penicillin in combination with various aminoglycosides were performed by Dr. Robert Moellering on the S. faecium isolated from the patient's blood immediately prior to mitral valve excision and replacement (Fig. 1).', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [s. faecium; patient]
<Options>: A: enterenecus faecium (aka candidatus enterenecus faecium)
B: enterococcus faecium e155
C: streptococcus faecium var. casseliflavus (aka enterococcus casseliflavus)
D: enterococcus faecium (streptococcus faecium) (aka enterococcus faecium)
E: kingdom
F: this
G: bacteroides faecium
H: mouse (aka mus musculus)
I: circe
J: None of the above. | [D; J] |
<Instruct>: Given the context 'Although S. faecalis represents the majority of clinical enterococcal isolates, S. faecium nonetheless comprises 5-10 percent of these isolates in some series [3,4].', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [s. faecalis; s. faecium]
<Options>: A: enterococcus faecium e155
B: enterococcus
C: enterococcus faecium (streptococcus faecium) (aka enterococcus faecium)
D: escherichia faecalis ('escherichia faecalis') (aka escherichia faecalis)
E: streptococcus faecium (aka enterococcus faecium)
F: streptococcus faecalis (aka enterococcus faecalis)
G: enterococcus faecalis (streptococcus glycerinaceus) (aka enterococcus faecalis)
H: sphingobacterium faecium
I: bacteroides faecalis
J: enterococcus florum
K: None of the above. | [G; E] |
<Instruct>: Given the context 'Although S. faecalis represents the majority of clinical enterococcal isolates, S. faecium nonetheless comprises 5-10 percent of these isolates in some series [3,4].', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [s. faecalis; s. faecium]
<Options>: A: enterococcus coli (aka escherichia coli)
B: enterococcus plantarum
C: enterococcus hirae
D: staphylococcus faecalis ('staphylococcus faecalis') (aka staphylococcus faecalis)
E: enterococcus proteiformis (aka enterococcus faecalis)
F: enterococcus
G: corynebacterium faecium
H: brachybacterium faecium
I: enterococcus gallinarum (streptococcus gallinarum) (aka enterococcus gallinarum)
J: streptococcus faecium (aka enterococcus faecium)
K: None of the above. | [E; J] |
<Instruct>: Given the context 'The MIC of penicillin against S. faecium is higher and this organism is more resistant to a number of different combinations of penicillin and various aminoglycosides than is S. faecalis', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [s. faecium; s. faecalis]
<Options>: A: enterococcus faecium e155
B: 'staphylococcus faecalis' (aka staphylococcus faecalis)
C: streptococcus liquefaciens (aka enterococcus faecalis)
D: streptococcus mutans
E: bacteroides faecalis
F: enterococcus coli (aka escherichia coli)
G: streptococcus faecium (aka enterococcus faecium)
H: enterococcus
I: brachybacterium faecium
J: None of the above. | [G; C] |
<Instruct>: Given the context 'The MIC of penicillin against S. faecium is higher and this organism is more resistant to a number of different combinations of penicillin and various aminoglycosides than is S. faecalis', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [s. faecium; s. faecalis]
<Options>: A: streptococcus faecalis (aka enterococcus faecalis)
B: enterococcus hirae
C: enterococcus faecium (streptococcus faecium) (aka enterococcus faecium)
D: streptococcus gallinarum (aka enterococcus gallinarum)
E: bacteroides faecium
F: streptococcus liquefaciens (aka enterococcus faecalis)
G: staphylococcus faecalis ('staphylococcus faecalis') (aka staphylococcus faecalis)
H: streptococcus cecorum (aka enterococcus cecorum)
I: streptococcus faecium (aka enterococcus faecium)
J: corynebacterium faecium
K: None of the above. | [I; F] |
<Instruct>: Given the context 'Clinically achievable levels of amino
246
S. FAECIUM ENDOCARDITIS
glycosides are generally ineffective against enterococci.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [s. faecium]
<Options>: A: streptococcus faecalis (aka enterococcus faecalis)
B: avispirillum faecium (aka candidatus avispirillum faecium)
C: bacteroides faecium
D: sphingobacterium faecium
E: enterococcus faecium (streptococcus faecium) (aka enterococcus faecium)
F: None of the above. | [E] |
<Instruct>: Given the context 'Plasmid-mediated modifying enzymes have been found in both S. faecalis and S. faecium' [12].', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [s. faecalis; s. faecium]
<Options>: A: enterococcus proteiformis (aka enterococcus faecalis)
B: bacteroides faecium
C: brachybacterium faecium
D: bacteroides faecalis
E: enterococcus
F: enterocoque (aka enterococcus faecalis)
G: streptococcus gallinarum (aka enterococcus gallinarum)
H: corynebacterium faecium
I: enterococcus faecium (streptococcus faecium) (aka enterococcus faecium)
J: streptococcus cecorum (aka enterococcus cecorum)
K: None of the above. | [F; I] |
<Instruct>: Given the context 'Plasmid-mediated modifying enzymes have been found in both S. faecalis and S. faecium' [12].', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [s. faecalis; s. faecium]
<Options>: A: staphylococcus faecalis ('staphylococcus faecalis') (aka staphylococcus faecalis)
B: enterococcus
C: enterococcus casseliflavus (streptococcus faecium subsp. casseliflavus) (aka enterococcus casseliflavus)
D: enterococcus faecium (streptococcus faecium) (aka enterococcus faecium)
E: streptococcus faecalis (aka enterococcus faecalis)
F: escherichia faecalis ('escherichia faecalis') (aka escherichia faecalis)
G: enterococcus florum
H: 'staphylococcus faecalis' (aka staphylococcus faecalis)
I: enterococcus coli (aka escherichia coli)
J: None of the above. | [E; D] |
<Instruct>: Given the context 'Combinations of penicillin with kanamycin, tobramycin, sisomicin, and netilmicin have consistently failed to demonstrate synergistic killing of S. faecium in vitro [6].', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [s. faecium]
<Options>: A: enterococcus florum
B: avispirillum faecium (aka candidatus avispirillum faecium)
C: corynebacterium faecium
D: streptococcus faecium (aka enterococcus faecium)
E: enterenecus faecium (aka candidatus enterenecus faecium)
F: None of the above. | [D] |
<Instruct>: Given the context 'Moellering et al. demonstrated in vivo, utilizing the rabbit model of endocarditis, that penicillin and netilmicin were not efficacious in the treatment of endocarditis caused by a low-level aminoglycoside-resistant strain of S. faecium [6].', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [rabbit; s. faecium]
<Options>: A: enterenecus faecium (aka candidatus enterenecus faecium)
B: lepus europaeus europaeus
C: hares (aka lepus)
D: lepus cuniculus (aka oryctolagus cuniculus)
E: cattle (aka bos)
F: streptococcus faecium (aka enterococcus faecium)
G: enterococcus hirae
H: european hare (aka lepus europaeus)
I: enterococcus casseliflavus (streptococcus faecium subsp. casseliflavus) (aka enterococcus casseliflavus)
J: corynebacterium faecium
K: None of the above. | [D; F] |
<Instruct>: Given the context 'Moellering et al. demonstrated in vivo, utilizing the rabbit model of endocarditis, that penicillin and netilmicin were not efficacious in the treatment of endocarditis caused by a low-level aminoglycoside-resistant strain of S. faecium [6].', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [rabbit; s. faecium]
<Options>: A: oryctolagus cuniculus cuniculus (lepus cuniculus cuniculus) (aka oryctolagus cuniculus cuniculus)
B: cattle (aka bos)
C: streptococcus faecium var. casseliflavus (aka enterococcus casseliflavus)
D: enterococcus proteiformis (aka enterococcus faecalis)
E: lepus (hares) (aka lepus)
F: clostridium faecium
G: streptococcus faecium (aka enterococcus faecium)
H: rabbit (aka oryctolagus cuniculus)
I: swamp rabbit (aka sylvilagus aquaticus)
J: staphylococcus faecalis ('staphylococcus faecalis') (aka staphylococcus faecalis)
K: None of the above. | [H; G] |
<Instruct>: Given the context 'In the present case, the recurrence of S. faecium endocarditis after six weeks of therapy with ampicillin and tobramycin confirms the therapeutic and clinical significance of their data, and emphasizes that tobramycin is not an aminoglycoside to be used for treatment of serious S. faecium infections.
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [s. faecium]
<Options>: A: corynebacterium faecium
B: enterococcus hirae
C: streptococcus faecalis (aka enterococcus faecalis)
D: enterococcus faecium (streptococcus faecium) (aka enterococcus faecium)
E: enterococcus
F: None of the above. | [D] |
<Instruct>: Given the context 'Bacterial tolerance has been suggested as a possible basis for therapeutic failures, particularly in the treatment of infections caused by Staphylococcus aureus with defects in the production of autolysins.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [staphylococcus aureus]
<Options>: A: 'staphylococcus faecalis' (aka staphylococcus faecalis)
B: staphylococcus simulans staphylolyticus (aka staphylococcus simulans bv. staphylolyticus)
C: staphylococcus sp. s
D: staphylococcus pyogenes aureus (aka staphylococcus aureus)
E: staphylococcus sp.
F: None of the above. | [D] |
<Instruct>: Given the context 'Bacterial tolerance has been suggested as a possible basis for therapeutic failures, particularly in the treatment of infections caused by Staphylococcus aureus with defects in the production of autolysins.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [staphylococcus aureus]
<Options>: A: 'staphylococcus faecalis' (aka staphylococcus faecalis)
B: staphylococcus simulans staphylolyticus (aka staphylococcus simulans bv. staphylolyticus)
C: staphylococcus sp.
D: staphylococcus sp. s
E: None of the above. | [E] |
<Instruct>: Given the context 'Lorian has also described the formation of numerous aberrant cross-walls by S. faecalis grown in the presence of subinhibitory concentrations of penicillin', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [s. faecalis]
<Options>: A: enterococcus faecium (streptococcus faecium) (aka enterococcus faecium)
B: streptococcus cecorum (aka enterococcus cecorum)
C: streptococcus mutans
D: enterococcus proteiformis (aka enterococcus faecalis)
E: bacteroides faecalis
F: None of the above. | [D] |
<Instruct>: Given the context 'MBCs were only slightly higher than MICs for the three S. faecium variants obtained from our patient, and they did not appear to be tolerant strains of S. faecium.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [s. faecium; patient]
<Options>: A: streptococcus faecalis (aka enterococcus faecalis)
B: kingdom
C: species
D: enterococcus florum
E: bacteroides faecium
F: this
G: streptococcus faecium (aka enterococcus faecium)
H: humans (aka homo)
I: human (aka homo sapiens)
J: enterococcus casseliflavus (streptococcus faecium subsp. casseliflavus) (aka enterococcus casseliflavus)
K: None of the above. | [G; I] |
<Instruct>: Given the context 'MBCs were only slightly higher than MICs for the three S. faecium variants obtained from our patient, and they did not appear to be tolerant strains of S. faecium.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [s. faecium; patient]
<Options>: A: corynebacterium faecium
B: genus
C: homo sapiens (human) (aka homo sapiens)
D: brachybacterium faecium
E: goes
F: this
G: sphingobacterium faecium
H: clostridium faecium
I: species
J: streptococcus faecium (aka enterococcus faecium)
K: None of the above. | [J; C] |
<Instruct>: Given the context 'Alternatively, a
'Wennersten C, Moellering RC Jr: Mechanism of resistance to penicillin-aminoglycoside synergism in Streptococcus faecium.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [streptococcus faecium]
<Options>: A: enterococcus florum
B: streptococcus faecium (aka enterococcus faecium)
C: clostridium faecium
D: enterenecus faecium (aka candidatus enterenecus faecium)
E: bacteroides faecium
F: None of the above. | [B] |
<Instruct>: Given the context 'In summary, our patient was treated for Streptococcusfaecium endocarditis with both ampicillin and the aminoglycoside antibiotic, tobramycin.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [patient; streptococcusfaecium]
<Options>: A: streptococcus faecium (aka enterococcus faecium)
B: isolate
C: homo sapiens (human) (aka homo sapiens)
D: goes
E: enterococcus plantarum
F: streptococcus faecavium (aka candidatus streptococcus faecavium)
G: streptococcus ferus
H: genus
I: streptococcus durans (aka enterococcus durans)
J: species
K: None of the above. | [C; A] |
<Instruct>: Given the context 'In summary, our patient was treated for Streptococcusfaecium endocarditis with both ampicillin and the aminoglycoside antibiotic, tobramycin.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [patient; streptococcusfaecium]
<Options>: A: enterococcus faecium (streptococcus faecium) (aka enterococcus faecium)
B: streptococcus fermentans
C: enterococcus florum
D: streptococcus faecavium (aka candidatus streptococcus faecavium)
E: isolate
F: human (aka homo sapiens)
G: proxys
H: streptococcus ferus
I: data
J: subsection
K: None of the above. | [F; A] |
<Instruct>: Given the context 'In summary, our patient was treated for Streptococcusfaecium endocarditis with both ampicillin and the aminoglycoside antibiotic, tobramycin.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [patient; streptococcusfaecium]
<Options>: A: streptococcus fermentans
B: streptococcus ferus
C: enterococcus faecium (streptococcus faecium) (aka enterococcus faecium)
D: enterococcus florum
E: proxys
F: data
G: subsection
H: isolate
I: streptococcus faecavium (aka candidatus streptococcus faecavium)
J: None of the above. | [J; C] |
<Instruct>: Given the context 'The authors also wish to thank Dr. Howard S. Forster for referring this patient to us, Ms. Mary Murray and Deborah Beauvais for manuscript preparation, and Ms. Gertrude Barden, MT (ASCP), MHS, for technical assistance and advice in evaluation of this patient.
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [patient]
<Options>: A: human (aka homo sapiens)
B: species
C: proxys
D: circe
E: probles
F: None of the above. | [A] |
<Instruct>: Given the context 'Facklam RR: Recognition of group D streptococcal species of human origin by biochemical and
physiological tests.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [human]
<Options>: A: biota (aka cellular organisms)
B: homo sapiens (human) (aka homo sapiens)
C: placental mammals (aka eutheria)
D: primate (aka primates)
E: genus
F: None of the above. | [B] |
<Instruct>: Given the context 'Shungu DL, Cornett JB, Shockman GD: Morphological and physiological study of autolytic
defective Streptococcus faecium strains.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [streptococcus faecium]
<Options>: A: enterococcus hirae
B: streptococcus faecium (aka enterococcus faecium)
C: brachybacterium faecium
D: corynebacterium faecium
E: bacteroides faecium
F: None of the above. | [B] |
<Instruct>: Given the context 'Moellering RC Jr, Korzeniowski OM, Sande MA, et al: Species-specific resistance to antimicrobial
synergism in Streptococcusfaecium and Streptococcusfaecalis.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [streptococcusfaecium; streptococcusfaecalis]
<Options>: A: streptococcus humanilactis
B: clostridium faecium
C: streptococcus faecalis (aka enterococcus faecalis)
D: streptococcus faecavium (aka candidatus streptococcus faecavium)
E: bacteroides faecalis
F: enterococcus florum
G: staphylococcus faecalis ('staphylococcus faecalis') (aka staphylococcus faecalis)
H: streptococcus penaeicida
I: streptococcus faecium (aka enterococcus faecium)
J: None of the above. | [I; C] |
<Instruct>: Given the context 'Moellering RC Jr, Korzeniowski OM, Sande MA, et al: Species-specific resistance to antimicrobial
synergism in Streptococcusfaecium and Streptococcusfaecalis.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [streptococcusfaecium; streptococcusfaecalis]
<Options>: A: clostridium faecium
B: streptococcus humanilactis
C: streptococcus faecavium (aka candidatus streptococcus faecavium)
D: enterococcus faecalis (streptococcus glycerinaceus) (aka enterococcus faecalis)
E: enterococcus faecium (streptococcus faecium) (aka enterococcus faecium)
F: streptococcus cecorum (aka enterococcus cecorum)
G: enterococcus plantarum
H: streptococcus fermentans
I: enterococcus florum
J: None of the above. | [E; D] |
<Instruct>: Given the context 'Moellering RC Jr, Murray BE, Schoenbaum SC, et al: A novel mechanism of resistance to penicillin
gentamicin synergism in S. faecalis.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [s. faecalis]
<Options>: A: 'staphylococcus faecalis' (aka staphylococcus faecalis)
B: streptococcus liquefaciens (aka enterococcus faecalis)
C: enterococcus plantarum
D: streptococcus faecium (aka enterococcus faecium)
E: enterococcus coli (aka escherichia coli)
F: None of the above. | [B] |
<Instruct>: Given the context 'Krogstad DJ, Korfhagen TR, Moellering RC Jr, et al: Aminoglycoside-inactivating enzymes in
clinical isolates of Streptococcusfaecalis: An explanation for resistance to antibiotic synergism.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [streptococcusfaecalis]
<Options>: A: streptococcus caprinus (aka streptococcus gallolyticus)
B: streptococcus ferus
C: streptococcus gallinarum (aka enterococcus gallinarum)
D: streptococcus faecalis (aka enterococcus faecalis)
E: streptococcus humanilactis
F: None of the above. | [D] |
<Instruct>: Given the context 'J Clin Invest 62:480-486, 1978
S. FAECIUM ENDOCARDITIS 249
12.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [s. faecium]
<Options>: A: streptococcus faecium var. casseliflavus (aka enterococcus casseliflavus)
B: enterococcus florum
C: clostridium faecium
D: enterococcus hirae
E: streptococcus faecium (aka enterococcus faecium)
F: None of the above. | [E] |
<Instruct>: Given the context 'J Clin Invest 62:480-486, 1978
S. FAECIUM ENDOCARDITIS 249
12.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [s. faecium]
<Options>: A: enterococcus hirae
B: streptococcus faecium var. casseliflavus (aka enterococcus casseliflavus)
C: clostridium faecium
D: enterococcus florum
E: None of the above. | [E] |
<Instruct>: Given the context 'Abstract
A recombinant phage, SpC3, containing a 17 kb genomic DNA insert representing approximately 60% of the 3' portion of the sheep collagen alpha 2 gene, was evaluated by electron microscopic R loop analysis.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [sheep]
<Options>: A: ovis
B: cattle (aka bos)
C: cow (aka bos taurus) (aka bos taurus)
D: ovis nivicola (ovis canadensis nivicola) (aka ovis nivicola)
E: ovis orientalis aries (aka ovis aries)
F: None of the above. | [E] |
<Instruct>: Given the context 'Images
Nucleic Acids Research
Structural organization of a 17 KB segment of the a2 collagen gene: evaluation by R loop mapping Millie P.Schafer, Charles D.Boyd, Paul Tolstoshev and Ronald G.Crystal
Pulmonary Branch, National Heart, Lung and Blood Institute, National Institutes of Health, Bethesda, MD 20205, USA
Received 13 February 1980
ABSTRACT
A recombinant phage, SpC3, containing a 17 kb genomic DNA insert rep
resenting approximately 60% of the 3' portion of the sheep collagen a2 gene, was evaluated by electron microscopic R loop analysis.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [sheep]
<Options>: A: suidae (pigs (aka suidae))
B: lambs (aka ovis aries)
C: ovis aries vignei (aka ovis vignei)
D: ovis
E: cattle (aka bos)
F: None of the above. | [B] |
<Instruct>: Given the context 'The present study further characterizes this portion of the a2
gene by utilizing electron microscopic R loop analysis to map the coding regions (exons) and intervening sequences (introns) contained within the sheep genomic insert of SpC3.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [sheep]
<Options>: A: ovis sp.
B: domestic sheep (aka ovis aries)
C: ovis vignei (ovis orientalis vignei) (aka ovis vignei)
D: dall sheep (aka ovis dalli)
E: ovis
F: None of the above. | [B] |
<Instruct>: Given the context 'The sheep a2 collagen recombinant clone, SpC3, containing a portion of the sheep a2 gene, was isolated as previously described (2).', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [sheep]
<Options>: A: ovis
B: ovis nivicola (ovis canadensis nivicola) (aka ovis nivicola)
C: domestic sheep (aka ovis aries)
D: ovis sp.
E: suidae (pigs (aka suidae))
F: None of the above. | [C] |
<Instruct>: Given the context 'Briefly,
high molecular weight fetal sheep liver DNA was extracted by the method of Blin and Stafford (3), and 15-20 kb DNA fragments, resulting from partial Eco RI digestion, were isolated and ligated to the left and right arms of Charon 4A.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [sheep]
<Options>: A: cow (aka bos taurus) (aka bos taurus)
B: sheep (aka ovis aries)
C: ovis aries vignei (aka ovis vignei)
D: suidae (pigs (aka suidae))
E: ovis
F: None of the above. | [B] |
<Instruct>: Given the context 'The recombinant DNA was then packaged in vitro and the sheep
genomic library amplified (4-6).', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [sheep]
<Options>: A: cattle (aka bos)
B: domestic sheep (aka ovis aries)
C: bovidae
D: suidae (pigs (aka suidae))
E: ovis dalli (dall's sheep) (aka ovis dalli)
F: None of the above. | [B] |
<Instruct>: Given the context 'Screening of the sheep genomic library was
conducted utilizing [32 P]-labeled fetal sheep tendon type I collagen cDNA and
several positive recombinant phages were isolated.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [sheep]
<Options>: A: ovis ovis (aka ovis aries)
B: cow (aka bos taurus) (aka bos taurus)
C: ovis nivicola (ovis canadensis nivicola) (aka ovis nivicola)
D: bovidae
E: cattle (aka bos)
F: None of the above. | [A] |
<Instruct>: Given the context 'One recombinant, containing a 17 kb sheep genomic insert, was demonstrated to have coding sequences corresponding to 60% of the 3' end of a2 mRNA.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [sheep]
<Options>: A: ovis aries vignei (aka ovis vignei)
B: ovis sp.
C: ovis
D: cow (aka bos taurus) (aka bos taurus)
E: ovis ovis (aka ovis aries)
F: None of the above. | [E] |
<Instruct>: Given the context 'The construction and screening of the sheep genomic library together with amplification of pCg45 and preparation of high titre lysates of chimaeric
Charon 4A were performed under the physical and biological containment levels specified by the NIH guidelines for recombinant DNA research (11).
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [sheep]
<Options>: A: ovis nivicola (ovis canadensis nivicola) (aka ovis nivicola)
B: ovis ammon aries (aka ovis aries)
C: ovis aries vignei (aka ovis vignei)
D: cow (aka bos taurus) (aka bos taurus)
E: dall sheep (aka ovis dalli)
F: None of the above. | [B] |
<Instruct>: Given the context 'Hybridization of fetal sheep tendon type I collagen mRNA to SpC3 DNA
yielded a complex R loop pattern in the region where the sheep genomic insert was expected to be ligated to the arms of the lambda vector, Charon 4A.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [sheep]
<Options>: A: ovis ammon aries (aka ovis aries)
B: ovis
C: cattle (aka bos)
D: ovis aries vignei (aka ovis vignei)
E: ovis sp.
F: None of the above. | [A] |
<Instruct>: Given the context 'Hybridization of fetal sheep tendon type I collagen mRNA to SpC3 DNA
yielded a complex R loop pattern in the region where the sheep genomic insert was expected to be ligated to the arms of the lambda vector, Charon 4A.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [sheep]
<Options>: A: ovis aries vignei (aka ovis vignei)
B: ovis sp.
C: cattle (aka bos)
D: ovis
E: None of the above. | [E] |
<Instruct>: Given the context 'To
confirm that these hybridization events were restricted to the inserted sheep DNA fragment, duplex DNA strands on both sides of this hybridization area were measured.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [sheep]
<Options>: A: dall sheep (aka ovis dalli)
B: ovis orientalis aries (aka ovis aries)
C: cow (aka bos taurus) (aka bos taurus)
D: ovis
E: ovis nivicola (ovis canadensis nivicola) (aka ovis nivicola)
F: None of the above. | [B] |
<Instruct>: Given the context 'Although, by convention, introns are usually sequentially labeled 5' to 3', an opposite order had to be employed in this case as SpC3 does not contain the sequences coding for the 5' end of sheep a2 mRNA.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [sheep]
<Options>: A: ovis ammon aries (aka ovis aries)
B: cattle (aka bos)
C: ovis
D: dall sheep (aka ovis dalli)
E: ovis nivicola (ovis canadensis nivicola) (aka ovis nivicola)
F: None of the above. | [A] |
<Instruct>: Given the context 'A small non-hybridized tail was consistently found in the region where
the right arm of the phage was ligated to the sheep genomic insert (Figure 1).', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [sheep]
<Options>: A: ovis ammon aries (aka ovis aries)
B: ovis
C: cow (aka bos taurus) (aka bos taurus)
D: ovis nivicola (ovis canadensis nivicola) (aka ovis nivicola)
E: ovis aries vignei (aka ovis vignei)
F: None of the above. | [A] |
<Instruct>: Given the context 'Electron microscopic visualization of all 17 introns and 18 exons
from hybrid molecules formed between recombinant clone SpC3 DNA and fetal sheep
tendon a2 mRNA.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [sheep]
<Options>: A: ovis dalli (dall's sheep) (aka ovis dalli)
B: ovis aries vignei (aka ovis vignei)
C: cattle (aka bos)
D: bovidae
E: ovis ovis (aka ovis aries)
F: None of the above. | [E] |
<Instruct>: Given the context 'Electron microscopic R loop analysis
present in SpC3 DNA1.
of the sheep a2 introns
SpC3 was hybridized to sheep a2 mRNA as described in Materials and Methods; intron lengths were determined by comparison with *X-174 DNA lengths.
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [sheep]
<Options>: A: dall's sheep (aka ovis dalli)
B: bovidae
C: suidae (pigs (aka suidae))
D: ovis vignei (ovis orientalis vignei) (aka ovis vignei)
E: ovis ammon aries (aka ovis aries)
F: None of the above. | [E] |
<Instruct>: Given the context 'Electron microscopic R loop analysis of the sheep a2 exons
present in SpC3 DNA1.
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [sheep]
<Options>: A: sheep (aka ovis aries)
B: suidae (pigs (aka suidae))
C: ovis dalli (dall's sheep) (aka ovis dalli)
D: ovis sp.
E: cow (aka bos taurus) (aka bos taurus)
F: None of the above. | [A] |
<Instruct>: Given the context '36 q5 - _ 33 130?47 r5 r 6 78?36
SpC3 was hybridized to sheep a2 mRNA as described in M4aterials and
Methods; exon lengths were determined by comparison with pBR322 DNA lengths.
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [sheep]
<Options>: A: ovis aries vignei (aka ovis vignei)
B: ovis nivicola (ovis canadensis nivicola) (aka ovis nivicola)
C: bovidae
D: ovis
E: wild sheep (aka ovis aries)
F: None of the above. | [E] |
<Instruct>: Given the context 'The largest exon, "a", located on the extreme 3' end of the sheep genomic insert, contained
approximately 800 bp.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [sheep]
<Options>: A: ovis sp.
B: lambs (aka ovis aries)
C: suidae (pigs (aka suidae))
D: ovis nivicola (ovis canadensis nivicola) (aka ovis nivicola)
E: cattle (aka bos)
F: None of the above. | [B] |
<Instruct>: Given the context 'Exon "a" and exon "b", the two exons situated on either side of intron 1, coded for around 1000 bases of a2 collagen information; these two
exons contained one-third of the mapped 3,014 DNA bases complementary to a2 mRNA Length distribution and organization of the introns and exons in the sheep genomi c i nsert.
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [sheep]
<Options>: A: ovis nivicola (ovis canadensis nivicola) (aka ovis nivicola)
B: ovis dalli (dall's sheep) (aka ovis dalli)
C: ovis ammon aries (aka ovis aries)
D: cow (aka bos taurus) (aka bos taurus)
E: ovis aries vignei (aka ovis vignei)
F: None of the above. | [C] |
<Instruct>: Given the context 'Therefore, only 18% of the mapped 17 kb sheep genetic insert actually contained a2 structural information.
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [sheep]
<Options>: A: ovis sp.
B: ovis vignei (ovis orientalis vignei) (aka ovis vignei)
C: suidae (pigs (aka suidae))
D: ovis orientalis aries (aka ovis aries)
E: ovis
F: None of the above. | [D] |
<Instruct>: Given the context 'Therefore, only 18% of the mapped 17 kb sheep genetic insert actually contained a2 structural information.
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [sheep]
<Options>: A: ovis
B: suidae (pigs (aka suidae))
C: ovis sp.
D: ovis vignei (ovis orientalis vignei) (aka ovis vignei)
E: None of the above. | [E] |
<Instruct>: Given the context 'A minimum of 17 introns interrupt the 3 kb of ca2 genetic information interspersed as 18 exons over 17 kb of sheep DNA.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [sheep]
<Options>: A: ovis ovis (aka ovis aries)
B: ovis dalli (dall's sheep) (aka ovis dalli)
C: cattle (aka bos)
D: ovis nivicola (ovis canadensis nivicola) (aka ovis nivicola)
E: cow (aka bos taurus) (aka bos taurus)
F: None of the above. | [A] |
<Instruct>: Given the context 'Although the total number of introns present within the 60% 3' portion
of the a2 sheep gene was determined to be 17, variation in the precise number
TRANSRIPTlO
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [sheep]
<Options>: A: dall sheep (aka ovis dalli)
B: ovis nivicola (ovis canadensis nivicola) (aka ovis nivicola)
C: sheep (aka ovis aries)
D: ovis sp.
E: cattle (aka bos)
F: None of the above. | [C] |
<Instruct>: Given the context '5.5 50 4.5 4.0 3.5 3.0 2.5 2.0 1.5 1.0
KILOBASE
Fiue3 Organization of 60% of the 3' end of the sheep a2 collagen gene.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [sheep]
<Options>: A: ovis aries vignei (aka ovis vignei)
B: ovis ammon aries (aka ovis aries)
C: ovis nivicola (ovis canadensis nivicola) (aka ovis nivicola)
D: suidae (pigs (aka suidae))
E: cattle (aka bos)
F: None of the above. | [B] |
<Instruct>: Given the context 'Very small introns have been reported for tRNA genes (12,13),
and it will be necessary to sequence these regions of SpC3 to determine if such introns are present within the a2 sheep genome.
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [sheep]
<Options>: A: cow (aka bos taurus) (aka bos taurus)
B: cattle (aka bos)
C: dall sheep (aka ovis dalli)
D: ovis nivicola (ovis canadensis nivicola) (aka ovis nivicola)
E: ovis aries (ovis orientalis aries) (aka ovis aries)
F: None of the above. | [E] |
<Instruct>: Given the context 'The existence of mRNAs comprised of sequences complementary to noncontiguous regions in a DNA genome was first described for adenovirus (14,15) and
simian virus (16,17) genes.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [adenovirus]
<Options>: A: adeno-associated virus 1 (aka adeno-associated virus - 1)
B: adeno-associated virus clade a
C: adeno-associated virus
D: adenoviridae
E: avian adeno-associated virus
F: None of the above. | [D] |
<Instruct>: Given the context 'The consistent appearance of a small non-hybridized tail, approximately 100 nucleotides in length, in the region where the right arm of the phage was ligated to the sheep genomic insert of SpC3 very likely corresponded to the
3' poly A sequence of the a2 mRNA.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [sheep]
<Options>: A: ovis
B: ovis ammon aries (aka ovis aries)
C: ovis dalli (dall's sheep) (aka ovis dalli)
D: cow (aka bos taurus) (aka bos taurus)
E: cattle (aka bos)
F: None of the above. | [B] |
<Instruct>: Given the context 'We are also grateful to Margery Sullivan, Laboratory of Molecular Genetics,
National Institute of Child Health and Human Development, for helpful discussions and to Dr. Helga Boedtker, Department of Chemistry, Harvard University, for making available the recombinant plasmid pCg45.
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [child; human]
<Options>: A: circe
B: species
C: homo sapiens (human) (aka homo sapiens)
D: this
E: avian (aka aves)
F: proeces
G: kingdom
H: primate (aka primates)
I: None of the above. | [C; C] |
<Instruct>: Given the context 'We are also grateful to Margery Sullivan, Laboratory of Molecular Genetics,
National Institute of Child Health and Human Development, for helpful discussions and to Dr. Helga Boedtker, Department of Chemistry, Harvard University, for making available the recombinant plasmid pCg45.
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [child; human]
<Options>: A: species
B: birds (aka aves)
C: animals (aka metazoa)
D: genus
E: avian (aka aves)
F: circe
G: suborder
H: human (aka homo sapiens)
I: None of the above. | [H; H] |
<Instruct>: Given the context 'We are also grateful to Margery Sullivan, Laboratory of Molecular Genetics,
National Institute of Child Health and Human Development, for helpful discussions and to Dr. Helga Boedtker, Department of Chemistry, Harvard University, for making available the recombinant plasmid pCg45.
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [child; human]
<Options>: A: suborder
B: animals (aka metazoa)
C: birds (aka aves)
D: species
E: avian (aka aves)
F: circe
G: genus
H: None of the above. | [H; H] |
<Instruct>: Given the context 'Scp160p, a multiple KH-domain protein, is a component of mRNP complexes in yeast
Abstract
Scp160p is a 160 kDa protein in the yeast Saccharomyces cerevisiae that contains 14 repeats of the hnRNP K-homology (KH) domain, and demonstrates significant sequence homology to a family of proteins collectively known as vigilins.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [yeast; saccharomyces cerevisiae]
<Options>: A: saccharomyces sp.
B: saccharomycetes (hemiascomycetes) (aka saccharomycetes)
C: saccharomyces hansenii (aka debaryomyces hansenii)
D: saccharomyces cerevisiae (saccharomyces cerevisiae (desm.) meyen ex e.c. hansen, 1883) (aka saccharomyces cerevisiae)
E: saccharomyces cerevisiae x saccharomyces mikatae
F: saccharomyces cf. cerevisiae
G: saccharomyces albicans (aka candida albicans)
H: None of the above. | [D; D] |
<Instruct>: Given the context 'Scp160p, a multiple KH-domain protein, is a component of mRNP complexes in yeast
Abstract
Scp160p is a 160 kDa protein in the yeast Saccharomyces cerevisiae that contains 14 repeats of the hnRNP K-homology (KH) domain, and demonstrates significant sequence homology to a family of proteins collectively known as vigilins.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [yeast; saccharomyces cerevisiae]
<Options>: A: true yeasts (aka saccharomycotina)
B: saccharomyces cerevisiae x saccharomyces paradoxus
C: saccharomyces sp.
D: saccharomyces cerevisiae synthetic construct
E: saccharomyces hansenii (aka debaryomyces hansenii)
F: saccharomyces cf. cerevisiae
G: mycoderma cerevisiae (aka saccharomyces cerevisiae)
H: saccharomyceta
I: None of the above. | [G; G] |
<Instruct>: Given the context 'These results demonstrate that Scp160p associates with polyribosome-bound mRNP complexes in vivo, implicating a role for this protein in one or more levels of mRNA metabolism in yeast.
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [yeast]
<Options>: A: saccharomycotina (budding yeasts & others) (aka saccharomycotina)
B: saccharomyces lactis (aka kluyveromyces lactis)
C: saccharomyces sp.
D: mycoderma cerevisiae (aka saccharomyces cerevisiae)
E: candida/saccharomycetales (aka candida/saccharomycales clade)
F: None of the above. | [D] |
<Instruct>: Given the context 'INTRODUCTION
Scp160p is a 1222 amino acid Saccharomyces cerevisiae protein that contains 14 copies of the hnRNP K homology (KH) domain, a highly conserved motif found in many proteins involved in RNA metabolism (1).', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [saccharomyces cerevisiae]
<Options>: A: saccharomyces cerevisiae x saccharomyces uvarum
B: saccharomyces cf. cerevisiae
C: saccharomyces lactis (aka kluyveromyces lactis)
D: saccharomyces cerevisiae x saccharomyces paradoxus
E: saccharomyces cerevisiae (saccharomyces cerevisiae (desm.) meyen ex e.c. hansen, 1883) (aka saccharomyces cerevisiae)
F: None of the above. | [E] |
<Instruct>: Given the context 'KH domain-containing proteins appear to have diverse functions and have been identified in all kingdoms of life, including the ribosomal protein S3 from Escherichia coli (1), Mer1p from S.cerevisiae, a meiosis-specific splicing factor (1), MEX-3 from Caenorhabditis elegans, presumably involved in mRNA localization during development (2), and FMRP, the fragile-X mental retardation protein in humans (3).', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [escherichia coli; s.cerevisiae; caenorhabditis elegans; humans]
<Options>: A: homo (humans) (aka homo)
B: saccharomyces hansenii (aka debaryomyces hansenii)
C: rhabditis elegans (aka caenorhabditis elegans)
D: enterobacteriaceae bacterium
E: eutherian mammals (aka eutheria)
F: saccharomyces lactis (aka kluyveromyces lactis)
G: human (aka homo sapiens)
H: bactris elegans
I: escherichia sp.
J: zodarion elegans (enyo elegans) (aka zodarion elegans)
K: escherichia faecalis ('escherichia faecalis') (aka escherichia faecalis)
L: saccharomyces paradoxus
M: species
N: e. coli (aka escherichia coli)
O: saccharomyces globosus (aka saccharomyces uvarum)
P: cyclostrongylus elegans
Q: escherichia coli 1a
R: saccharomyces cerevisiae (desm.) meyen ex e.c. hansen, 1883 (aka saccharomyces cerevisiae)
S: primate (aka primates)
T: caenorhabditis vulgaris (aka caenorhabditis remanei)
U: None of the above. | [N; R; C; G] |
<Instruct>: Given the context 'KH domain-containing proteins appear to have diverse functions and have been identified in all kingdoms of life, including the ribosomal protein S3 from Escherichia coli (1), Mer1p from S.cerevisiae, a meiosis-specific splicing factor (1), MEX-3 from Caenorhabditis elegans, presumably involved in mRNA localization during development (2), and FMRP, the fragile-X mental retardation protein in humans (3).', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [escherichia coli; s.cerevisiae; caenorhabditis elegans; humans]
<Options>: A: primate (aka primates)
B: bactris elegans
C: saccharomyces paradoxus
D: homo (humans) (aka homo)
E: escherichia faecalis ('escherichia faecalis') (aka escherichia faecalis)
F: saccharomyces globosus (aka saccharomyces uvarum)
G: enterobacteriaceae bacterium
H: eutherian mammals (aka eutheria)
I: caenorhabditis vulgaris (aka caenorhabditis remanei)
J: cyclostrongylus elegans
K: escherichia coli 1a
L: saccharomyces lactis (aka kluyveromyces lactis)
M: rhabditis elegans (aka caenorhabditis elegans)
N: species
O: e. coli (aka escherichia coli)
P: zodarion elegans (enyo elegans) (aka zodarion elegans)
Q: escherichia sp.
R: saccharomyces hansenii (aka debaryomyces hansenii)
S: human (aka homo sapiens)
T: None of the above. | [O; T; M; S] |
<Instruct>: Given the context 'KH domain-containing proteins appear to have diverse functions and have been identified in all kingdoms of life, including the ribosomal protein S3 from Escherichia coli (1), Mer1p from S.cerevisiae, a meiosis-specific splicing factor (1), MEX-3 from Caenorhabditis elegans, presumably involved in mRNA localization during development (2), and FMRP, the fragile-X mental retardation protein in humans (3).', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [escherichia coli; s.cerevisiae; caenorhabditis elegans; humans]
<Options>: A: escherichia coli (escherichia/shigella coli) (aka escherichia coli)
B: enterobacterales (enterobacteriaceae and related endosymbionts) (aka enterobacterales)
C: saccharomyces albicans (aka candida albicans)
D: rhabditis elegans (aka caenorhabditis elegans)
E: enterobacteria (aka enterobacteriaceae)
F: neandertal man (aka homo sapiens neanderthalensis)
G: uca elegans (aka tubuca elegans)
H: saccharomyceta
I: saccharomyces cf. cerevisiae/paradoxus (saccharomyces cerevisiae or paradoxus) (aka saccharomyces cf. cerevisiae/paradoxus)
J: urocitellus elegans elegans (spermophilus elegans elegans) (aka urocitellus elegans elegans)
K: saccharomyces paradoxus
L: bactris elegans
M: saccharomyces cerevisiae (saccharomyces cerevisiae (desm.) meyen ex e.c. hansen, 1883) (aka saccharomyces cerevisiae)
N: escherichia coli 1a
O: species
P: homo (humans) (aka homo)
Q: caenorhabditis vulgaris (aka caenorhabditis remanei)
R: birds (aka aves)
S: escherichia coli b (escherichia coli (strain b)) (aka escherichia coli b)
T: homo sapiens (human) (aka homo sapiens)
U: None of the above. | [A; M; D; T] |
<Instruct>: Given the context 'KH domain-containing proteins appear to have diverse functions and have been identified in all kingdoms of life, including the ribosomal protein S3 from Escherichia coli (1), Mer1p from S.cerevisiae, a meiosis-specific splicing factor (1), MEX-3 from Caenorhabditis elegans, presumably involved in mRNA localization during development (2), and FMRP, the fragile-X mental retardation protein in humans (3).', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [escherichia coli; s.cerevisiae; caenorhabditis elegans; humans]
<Options>: A: escherichia coli (strain b) (aka escherichia coli b)
B: saccharomyces paradoxus
C: enterobacteria (aka enterobacteriaceae)
D: primate (aka primates)
E: caenorhabditis elegans (rhabditis elegans) (aka caenorhabditis elegans)
F: kingdom
G: bacteria (ex cavalier-smith 1987) (aka bacteria)
H: e. coli (aka escherichia coli)
I: elegans subgroup (in: mosquitos)
J: birds (aka aves)
K: saccharomyces hansenii (aka debaryomyces hansenii)
L: gongylostoma elegans elegans (clausilia elegans elegans) (aka gongylostoma elegans elegans)
M: saccharomyceta
N: enterobacteriaceae bacterium
O: human (aka homo sapiens)
P: genus
Q: cyclostrongylus elegans
R: drosophila elegans
S: brewer's yeast (aka saccharomyces cerevisiae)
T: saccharomyces lactis (aka kluyveromyces lactis)
U: None of the above. | [H; S; E; O] |
<Instruct>: Given the context 'KH domain-containing proteins appear to have diverse functions and have been identified in all kingdoms of life, including the ribosomal protein S3 from Escherichia coli (1), Mer1p from S.cerevisiae, a meiosis-specific splicing factor (1), MEX-3 from Caenorhabditis elegans, presumably involved in mRNA localization during development (2), and FMRP, the fragile-X mental retardation protein in humans (3).', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [escherichia coli; s.cerevisiae; caenorhabditis elegans; humans]
<Options>: A: uca elegans (aka tubuca elegans)
B: rhabditis elegans (aka caenorhabditis elegans)
C: homo sapiens (human) (aka homo sapiens)
D: uronema elegans
E: polyzonia elegans
F: hominidae (great apes) (aka hominidae)
G: caenorhabditis vulgaris (aka caenorhabditis remanei)
H: escherichia sp.
I: neanderthal man (aka homo sapiens neanderthalensis)
J: bacteria (ex cavalier-smith 1987) (aka bacteria)
K: kingdom
L: macrobiotus sapiens
M: escherichia phage
N: saccharomyces hansenii (aka debaryomyces hansenii)
O: escherichia/shigella coli (aka escherichia coli)
P: enterobacteriaceae bacterium
Q: saccharomyces paradoxus
R: saccharomyces cerevisiae x saccharomyces uvarum
S: saccharomyces cerevisiae or paradoxus (aka saccharomyces cf. cerevisiae/paradoxus)
T: saccharomyces cerevisiae (saccharomyces cerevisiae (desm.) meyen ex e.c. hansen, 1883) (aka saccharomyces cerevisiae)
U: None of the above. | [O; T; B; C] |
<Instruct>: Given the context 'Deletion of the SCP160 locus in yeast is not lethal, but results in a complex phenotype, including increased DNA content per cell, missegregation of genetic markers during sporulation, and abnormal cell morphology, including increased size and irregular shape (4).', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [yeast]
<Options>: A: saccharomyces sp.
B: saccharomyces cerevisiae (saccharomyces cerevisiae (desm.) meyen ex e.c. hansen, 1883) (aka saccharomyces cerevisiae)
C: saccharomyceta
D: saccharomyces lactis (aka kluyveromyces lactis)
E: saccharomyces cerevisiae x saccharomyces mikatae
F: None of the above. | [B] |
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