query stringclasses 175 values | positive listlengths 1 9 | negative listlengths 10 10 | system stringlengths 69 2.19k |
|---|---|---|---|
What is the biomedical concept corresponding to 'rats'? | [
"rat (rattus norvegicus) (rattus norvegicus)",
"rattus norvegicus (rats (rattus norvegicus))",
"rats (rattus norvegicus) (rattus norvegicus)",
"norway rat (rattus norvegicus)"
] | [
"rats (rattus) (rattus)",
"rat (rattus) (rattus)",
"rattus (rats (rattus))",
"rats (rattus sp.) (rattus sp.)",
"house rat (rattus rattus)",
"rattus sp. (rats (rattus sp.))",
"rattus rattoides (rattus rattus)",
"mus rattus (rattus rattus)",
"black rat (rattus rattus)",
"roof rat (rattus rattus)"
] | Given the context 'Cell cultures and infection with Ad-GFP/Rz-IGF2R and Ad-GFP
Cardiac myocytes were isolated from 1-day-old newborn rats using the Neonatal Cardiomyocyte Isolation System (Worthington).', answer the user's query. |
What is the biomedical concept corresponding to 'horse'? | [
"horse (equus caballus)",
"domestic horse (equus caballus)",
"equine (equus caballus)",
"equus caballus (equus przewalskii forma caballus)"
] | [
"horses (equidae)",
"equidae (horses)",
"equus subg. equus (equus)",
"equus sp.",
"eques",
"rv-horse",
"equus ferus (equus caballus ferus)",
"horsetails (equisetidae)",
"equus subgen. sussemionus (equus)",
"equus caballus ferus (equus ferus)"
] | Given the context 'The isolated cells were plated in 6-well plates and cultured in F-10 medium containing 5% (vol/vol) FBS and 10% (vol/vol) horse serum at 37°C in a tissue culture incubator with 5% CO2 and 98% relative humidity.', answer the user's query. |
What is the biomedical concept corresponding to 'rat'? | [
"rat (rattus norvegicus) (rattus norvegicus)",
"rattus norvegicus (rats (rattus norvegicus))",
"rats (rattus norvegicus) (rattus norvegicus)"
] | [
"rats (rattus) (rattus)",
"rat (rattus) (rattus)",
"rattus (rats (rattus))",
"rats (rattus sp.) (rattus sp.)",
"house rat (rattus rattus)",
"rattus rattoides (rattus rattus)",
"rattus sp. (rats (rattus sp.))",
"mus rattus (rattus rattus)",
"black rat (rattus rattus)",
"roof rat (rattus rattus)"
] | Given the context 'The plasmid containing the rat M6P/IGF2R gene was linearized and used as a transcription template.', answer the user's query. |
What is the biomedical concept corresponding to 'rat'? | [
"rat (rattus norvegicus) (rattus norvegicus)",
"rattus norvegicus (rats (rattus norvegicus))",
"rats (rattus norvegicus) (rattus norvegicus)"
] | [
"rats (rattus) (rattus)",
"rat (rattus) (rattus)",
"rattus (rats (rattus))",
"rats (rattus sp.) (rattus sp.)",
"house rat (rattus rattus)",
"rattus rattoides (rattus rattus)",
"rattus sp. (rats (rattus sp.))",
"mus rattus (rattus rattus)",
"black rat (rattus rattus)",
"roof rat (rattus rattus)"
] | Given the context 'Antisense RNA probes were transcribed in vitro using [33P]-UTP, T7 polymerase (Riboprobea System T7 kit, Promega), hybridized with the total RNA extracted from the rat cardiomyocytes, and digested with ribonuclease to remove non-hybridized RNA and probe.', answer the user's query. |
What is the biomedical concept corresponding to 'human'? | [
"human (homo sapiens)",
"homo sapiens (human)"
] | [
"humans (homo)",
"homo (humans)",
"macrobiotus sapiens",
"primate (primates)",
"hominoidea (apes (hominoidea))",
"hominidae (great apes)",
"ape (hominoidea) (hominoidea)",
"kingdom",
"apes (hominoidea) (hominoidea)",
"homininae (homo/pan/gorilla group)"
] | Given the context 'Briefly, cells were permeabilized with 0.25% saponin in 50 mM Hepes (pH 7.0), 150 mM NaCl, 5 mM β-glycerophosphate, 0.5% human serum albumin, and 10 mM mannose-6-phosphate (M6P) for 30 minutes on ice.', answer the user's query. |
What is the biomedical concept corresponding to 'bovine'? | [
"bovine (bos taurus)",
"bos bovis (bos taurus)",
"cow (bos taurus) (bos taurus)",
"domestic cattle (bos taurus)",
"domestic cow (bos taurus)",
"bos taurus (bos primigenius taurus)",
"bos primigenius taurus (bos taurus)",
"ox (bos taurus) (bos taurus)",
"dairy cow (bos taurus)"
] | [
"cattle (bos)",
"bos (cattle)",
"bovidae",
"bos taurus indicus (bos indicus)",
"boveria",
"bos sp.",
"bos indicus (bos primigenius indicus)",
"bos primigenius indicus (bos indicus)",
"bos taurus x bos indicus (bos indicus x bos taurus)",
"beefalo (bos taurus x bison bison)"
] | Given the context 'They were incubated with 20,000 units/ml β-glucuronidase from bovine liver (Sigma) in 50 mM Hepes (pH 7.5) containing 150 mM NaCl, 5 mM β-glycerophosphate, 0.5% human serum albumin, 0.5% saponin with or without 10 mM M6P overnight on ice.', answer the user's query. |
What is the biomedical concept corresponding to 'human'? | [
"human (homo sapiens)",
"homo sapiens (human)"
] | [
"humans (homo)",
"homo (humans)",
"macrobiotus sapiens",
"primate (primates)",
"hominoidea (apes (hominoidea))",
"hominidae (great apes)",
"ape (hominoidea) (hominoidea)",
"kingdom",
"apes (hominoidea) (hominoidea)",
"homininae (homo/pan/gorilla group)"
] | Given the context 'They were incubated with 20,000 units/ml β-glucuronidase from bovine liver (Sigma) in 50 mM Hepes (pH 7.5) containing 150 mM NaCl, 5 mM β-glycerophosphate, 0.5% human serum albumin, 0.5% saponin with or without 10 mM M6P overnight on ice.', answer the user's query. |
What is the biomedical concept corresponding to 'human'? | [
"human (homo sapiens)",
"homo sapiens (human)"
] | [
"humans (homo)",
"homo (humans)",
"macrobiotus sapiens",
"primate (primates)",
"hominoidea (apes (hominoidea))",
"hominidae (great apes)",
"ape (hominoidea) (hominoidea)",
"kingdom",
"apes (hominoidea) (hominoidea)",
"homininae (homo/pan/gorilla group)"
] | Given the context 'Briefly, confluent cell cultures were washed twice with pre-warmed serum-free DMEM followed by incubation with DMEM containing 5 mg/ml human serum albumin and 10 mM M6P for 20 minutes.', answer the user's query. |
What is the biomedical concept corresponding to 'human'? | [
"human (homo sapiens)",
"homo sapiens (human)"
] | [
"humans (homo)",
"homo (humans)",
"macrobiotus sapiens",
"primate (primates)",
"hominoidea (apes (hominoidea))",
"hominidae (great apes)",
"ape (hominoidea) (hominoidea)",
"kingdom",
"apes (hominoidea) (hominoidea)",
"homininae (homo/pan/gorilla group)"
] | Given the context 'Cells were then incubated in DMEM containing 5 mg/ml human serum albumin alone or 4000 units β-glucuronidase with or without 10 mM M6P for 2 hours at 37°C.', answer the user's query. |
What is the biomedical concept corresponding to 'patients'? | [
"human (homo sapiens)"
] | [
"clientister",
"theraps",
"personidae",
"proxys",
"perna",
"genus",
"aides",
"pero",
"inquisitor",
"plasmids"
] | Given the context 'For example, Britto and Elliot reported that the loss of abductor pollicis longus and extensor pollicis brevis in their two patients did not show functional compromise of strength and grip strength', answer the user's query. |
What is the biomedical concept corresponding to 'ascaris suum'? | [
"ascaris suum (pig roundworm)",
"pig roundworm (ascaris suum)"
] | [
"common roundworm (ascaris lumbricoides)",
"ascaris ovis",
"ascaris simplex (anisakis simplex)",
"ascaris sp.",
"ascaris",
"ascaris trichiura (trichuris trichiura)",
"ascaris lumbricoides (common roundworm)",
"trichuris trichiura (ascaris trichiura)",
"ascaris cati (toxocara cati)",
"ascaris colum... | Given the context 'Genomic-Bioinformatic Analysis of Transcripts Enriched in the Third-Stage Larva of the Parasitic Nematode Ascaris suum
Abstract
Differential transcription in Ascaris suum was investigated using a genomic-bioinformatic approach.', answer the user's query. |
What is the biomedical concept corresponding to 'ascaris suum'? | [
"ascaris suum (pig roundworm)",
"pig roundworm (ascaris suum)"
] | [
"common roundworm (ascaris lumbricoides)",
"ascaris ovis",
"ascaris simplex (anisakis simplex)",
"ascaris sp.",
"ascaris",
"ascaris trichiura (trichuris trichiura)",
"ascaris lumbricoides (common roundworm)",
"trichuris trichiura (ascaris trichiura)",
"ascaris cati (toxocara cati)",
"ascaris colum... | Given the context 'Genomic-Bioinformatic Analysis of Transcripts Enriched in the Third-Stage Larva of the Parasitic Nematode Ascaris suum
Abstract
Differential transcription in Ascaris suum was investigated using a genomic-bioinformatic approach.', answer the user's query. |
What is the biomedical concept corresponding to 'caenorhabditis elegans'? | [
"caenorhabditis elegans (rhabditis elegans)",
"rhabditis elegans (caenorhabditis elegans)"
] | [
"elegans subgroup (in: flies)",
"caenorhabditis sp.",
"drosophila elegans",
"caenorhabditis",
"cyclostrongylus elegans",
"polyzonia elegans",
"elegans subgroup (in: mosquitos)",
"enyo elegans (zodarion elegans)",
"uronema elegans",
"zodarion elegans (enyo elegans)"
] | Given the context 'Of the 91 clusters assembled, 56 molecules (61.5%) had homologues/orthologues in the free-living nematodes Caenorhabditis elegans and C. briggsae and/or other organisms, whereas 35 (38.5%) had no significant similarity to any sequences available in current gene databases.', answer the user's query. |
What is the biomedical concept corresponding to 'c. briggsae'? | [
"rhabditis briggsae (caenorhabditis briggsae)",
"caenorhabditis briggsae (rhabditis briggsae)"
] | [
"histiogamphelus briggsii",
"tomicodon briggsi",
"pseudochaetosphaeronema briggsiae",
"sabacon briggsi",
"cidariophanes brigitta",
"triadothrips briga",
"ectopsocus briggsi",
"papilio brigitta (eurema brigitta)",
"rasbora brigittae (boraras brigittae)",
"congopanchax brichardi"
] | Given the context 'Of the 91 clusters assembled, 56 molecules (61.5%) had homologues/orthologues in the free-living nematodes Caenorhabditis elegans and C. briggsae and/or other organisms, whereas 35 (38.5%) had no significant similarity to any sequences available in current gene databases.', answer the user's query. |
What is the biomedical concept corresponding to 'c. elegans'? | [
"caenorhabditis elegans (rhabditis elegans)",
"rhabditis elegans (caenorhabditis elegans)"
] | [
"elegans subgroup (in: flies)",
"drosophila elegans",
"theocolax elegans",
"cyclostrongylus elegans",
"polyzonia elegans",
"actinomucor elegans var. elegans",
"elegans subgroup (in: mosquitos)",
"bactris elegans",
"sipha elegans",
"urocitellus elegans elegans (spermophilus elegans elegans)"
] | Given the context 'In silico analyses inferred the C. elegans orthologues/homologues (n = 50) to be involved in apoptosis and insulin signaling (2%), ATP synthesis (2%), carbon metabolism (6%), fatty acid biosynthesis (2%), gap junction (2%), glucose metabolism (6%), or porphyrin metabolism (2%), although 34 (68%) of them could not be mapped to a specific metabolic pathway.', answer the user's query. |
What is the biomedical concept corresponding to 'c. elegans'? | [
"caenorhabditis elegans (rhabditis elegans)",
"rhabditis elegans (caenorhabditis elegans)"
] | [
"elegans subgroup (in: flies)",
"drosophila elegans",
"theocolax elegans",
"cyclostrongylus elegans",
"polyzonia elegans",
"actinomucor elegans var. elegans",
"elegans subgroup (in: mosquitos)",
"bactris elegans",
"sipha elegans",
"urocitellus elegans elegans (spermophilus elegans elegans)"
] | Given the context 'Functionally, 17 (34%) of them were predicted to be associated with (non-wild-type) RNAi phenotypes in C. elegans, the majority being embryonic lethality (Emb) (13 types; 58.8%), larval arrest (Lva) (23.5%) and larval lethality (Lvl) (47%).', answer the user's query. |
What is the biomedical concept corresponding to 'c. elegans'? | [
"caenorhabditis elegans (rhabditis elegans)",
"rhabditis elegans (caenorhabditis elegans)"
] | [
"elegans subgroup (in: flies)",
"drosophila elegans",
"theocolax elegans",
"cyclostrongylus elegans",
"polyzonia elegans",
"actinomucor elegans var. elegans",
"elegans subgroup (in: mosquitos)",
"bactris elegans",
"sipha elegans",
"urocitellus elegans elegans (spermophilus elegans elegans)"
] | Given the context 'A genetic interaction network was predicted for these 17 C. elegans orthologues, revealing highly significant interactions for nine molecules associated with embryonic and larval development (66.9%), information storage and processing (5.1%), cellular processing and signaling (15.2%), metabolism (6.1%), and unknown function (6.7%).', answer the user's query. |
What is the biomedical concept corresponding to 'c. elegans'? | [
"caenorhabditis elegans (rhabditis elegans)",
"rhabditis elegans (caenorhabditis elegans)"
] | [
"elegans subgroup (in: flies)",
"drosophila elegans",
"theocolax elegans",
"cyclostrongylus elegans",
"polyzonia elegans",
"actinomucor elegans var. elegans",
"elegans subgroup (in: mosquitos)",
"bactris elegans",
"sipha elegans",
"urocitellus elegans elegans (spermophilus elegans elegans)"
] | Given the context 'The potential roles of these molecules in development are discussed in relation to the known roles of their homologues/orthologues in C. elegans and some other nematodes.', answer the user's query. |
What is the biomedical concept corresponding to 'people'? | [
"human (homo sapiens)",
"homo sapiens (human)"
] | [
"personidae",
"humans (homo)",
"genus",
"kingdom",
"species",
"homo (humans)",
"personopsis",
"species group",
"suborder",
"biota (cellular organisms)"
] | Given the context 'For example, hundreds of millions of people are infected with geohelminths (soil-transmitted worms), such as blood-feeding hookworms Ancylostoma duodenale and/or Necator americanus, Trichuris trichiura and Ascaris spp.', answer the user's query. |
What is the biomedical concept corresponding to 'ancylostoma duodenale'? | [
"ancylostoma duodenale (agchylostoma duodenale)",
"agchylostoma duodenale (ancylostoma duodenale)"
] | [
"ancylostoma caninum (dog hookworm)",
"dog hookworm (ancylostoma caninum)",
"ancylostoma ceylanicum",
"ancylostoma",
"ancylostomatidae",
"ancylis sp. a",
"ancylostomia",
"ancylis diminuatana (ancylis diminutana)",
"ancylostoma braziliense",
"ancylis diminutana (ancylis diminuatana)"
] | Given the context 'For example, hundreds of millions of people are infected with geohelminths (soil-transmitted worms), such as blood-feeding hookworms Ancylostoma duodenale and/or Necator americanus, Trichuris trichiura and Ascaris spp.', answer the user's query. |
What is the biomedical concept corresponding to 'necator americanus'? | [
"necator americanus (new world hookworm)",
"new world hookworm (necator americanus)"
] | [
"xiphinema americanum (american dagger nematode)",
"necator sp.",
"esox americanus",
"mocuellus americanus",
"entomoscelis americana",
"caranginema americanum",
"campsicnemus americanus",
"tuckermannopsis americana",
"curatella americana (chaparro)",
"euchirograpsus americanus"
] | Given the context 'For example, hundreds of millions of people are infected with geohelminths (soil-transmitted worms), such as blood-feeding hookworms Ancylostoma duodenale and/or Necator americanus, Trichuris trichiura and Ascaris spp.', answer the user's query. |
What is the biomedical concept corresponding to 'trichuris trichiura'? | [
"trichuris trichiura (ascaris trichiura)",
"human whipworm (trichuris trichiura)",
"ascaris trichiura (trichuris trichiura)"
] | [
"trichuris",
"trichuris sp. (trichuris sp)",
"trichuris sp (trichuris sp.)",
"trichuridae",
"trichuris suis (trichocephalus suis)",
"trichuris muris (trichocephalus muris)",
"trichuris sp. cc-2014b",
"trichocephalus suis (trichuris suis)",
"trichuris sp. ch",
"trichuris sp. cc-2014a"
] | Given the context 'For example, hundreds of millions of people are infected with geohelminths (soil-transmitted worms), such as blood-feeding hookworms Ancylostoma duodenale and/or Necator americanus, Trichuris trichiura and Ascaris spp.', answer the user's query. |
What is the biomedical concept corresponding to 'human'? | [
"human (homo sapiens)",
"homo sapiens (human)"
] | [
"humans (homo)",
"homo (humans)",
"macrobiotus sapiens",
"primate (primates)",
"hominoidea (apes (hominoidea))",
"hominidae (great apes)",
"ape (hominoidea) (hominoidea)",
"kingdom",
"apes (hominoidea) (hominoidea)",
"homininae (homo/pan/gorilla group)"
] | Given the context '[1], causing serious adverse effects on human health, particularly in children.', answer the user's query. |
What is the biomedical concept corresponding to 'pigs'? | [
"pig (sus scrofa) (sus scrofa)",
"pigs (sus scrofa) (sus scrofa)",
"swine (sus scrofa)",
"sus scrofa (pigs (sus scrofa))",
"wild boar (sus scrofa)"
] | [
"domestic pig (sus scrofa domesticus)",
"pigs (suidae) (suidae)",
"suidae (pigs (suidae))",
"boars (suidae)",
"sus domestica (sus scrofa domesticus)",
"sus domesticus (sus scrofa domesticus)",
"sus scrofa domestica (sus scrofa domesticus)",
"sus scrofa domesticus (sus scrofa domestica)",
"guinea pig... | Given the context 'Similarly, parasitic nematodes of livestock, such as pigs, also cause substantial economic losses due to subclinical and clinical diseases, with billions of dollars spent annually on the treatment and control of gastro-intestinal nematodes.', answer the user's query. |
What is the biomedical concept corresponding to 'caenorhabditis elegans'? | [
"caenorhabditis elegans (rhabditis elegans)",
"rhabditis elegans (caenorhabditis elegans)"
] | [
"elegans subgroup (in: flies)",
"caenorhabditis sp.",
"drosophila elegans",
"caenorhabditis",
"cyclostrongylus elegans",
"polyzonia elegans",
"elegans subgroup (in: mosquitos)",
"enyo elegans (zodarion elegans)",
"uronema elegans",
"zodarion elegans (enyo elegans)"
] | Given the context 'Compared with the free-living nematode Caenorhabditis elegans, there is very little information on fundamental molecular aspects of development in parasitic nematodes [6]–[8].', answer the user's query. |
What is the biomedical concept corresponding to 'c. elegans'? | [
"caenorhabditis elegans (rhabditis elegans)",
"rhabditis elegans (caenorhabditis elegans)"
] | [
"elegans subgroup (in: flies)",
"drosophila elegans",
"theocolax elegans",
"cyclostrongylus elegans",
"polyzonia elegans",
"actinomucor elegans var. elegans",
"elegans subgroup (in: mosquitos)",
"bactris elegans",
"sipha elegans",
"urocitellus elegans elegans (spermophilus elegans elegans)"
] | Given the context 'Since the genome sequence of C. elegans was published in 1998 [9], many aspects of the molecular biology of this nematode have been elucidated.', answer the user's query. |
What is the biomedical concept corresponding to 'c. elegans'? | [
"caenorhabditis elegans (rhabditis elegans)",
"rhabditis elegans (caenorhabditis elegans)"
] | [
"elegans subgroup (in: flies)",
"drosophila elegans",
"theocolax elegans",
"cyclostrongylus elegans",
"polyzonia elegans",
"actinomucor elegans var. elegans",
"elegans subgroup (in: mosquitos)",
"bactris elegans",
"sipha elegans",
"urocitellus elegans elegans (spermophilus elegans elegans)"
] | Given the context 'For instance, microarray analyses have been used to examine developmental and gender-enriched gene expression [10],[11], and the functions of more than 96% of the C. elegans genes have been assessed by double-stranded RNA interference (RNAi, or gene silencing;', answer the user's query. |
What is the biomedical concept corresponding to 'c. elegans'? | [
"caenorhabditis elegans (rhabditis elegans)",
"rhabditis elegans (caenorhabditis elegans)"
] | [
"elegans subgroup (in: flies)",
"drosophila elegans",
"theocolax elegans",
"cyclostrongylus elegans",
"polyzonia elegans",
"actinomucor elegans var. elegans",
"elegans subgroup (in: mosquitos)",
"bactris elegans",
"sipha elegans",
"urocitellus elegans elegans (spermophilus elegans elegans)"
] | Given the context 'Comparative analyses of genetic data sets have shown that parasitic nematodes usually share ∼50–70% of genes with C. elegans (e.g., [19],[20]).', answer the user's query. |
What is the biomedical concept corresponding to 'c. elegans'? | [
"caenorhabditis elegans (rhabditis elegans)",
"rhabditis elegans (caenorhabditis elegans)"
] | [
"elegans subgroup (in: flies)",
"drosophila elegans",
"theocolax elegans",
"cyclostrongylus elegans",
"polyzonia elegans",
"actinomucor elegans var. elegans",
"elegans subgroup (in: mosquitos)",
"bactris elegans",
"sipha elegans",
"urocitellus elegans elegans (spermophilus elegans elegans)"
] | Given the context 'There is similarity in other features (such as basic body plan and moulting) between C. elegans and parasitic nematodes, suggesting that some molecular pathways are relatively conserved [8],[21].', answer the user's query. |
What is the biomedical concept corresponding to 'c. elegans'? | [
"caenorhabditis elegans (rhabditis elegans)",
"rhabditis elegans (caenorhabditis elegans)"
] | [
"elegans subgroup (in: flies)",
"drosophila elegans",
"theocolax elegans",
"cyclostrongylus elegans",
"polyzonia elegans",
"actinomucor elegans var. elegans",
"elegans subgroup (in: mosquitos)",
"bactris elegans",
"sipha elegans",
"urocitellus elegans elegans (spermophilus elegans elegans)"
] | Given the context 'Despite the advances in genomic technologies [7], [22]–[29] and the study of C. elegans, there is a paucity of information on the genomics of parasitic nematodes of animals, particularly in relation to development.', answer the user's query. |
What is the biomedical concept corresponding to 'humans'? | [
"human (homo sapiens)",
"homo sapiens (human)"
] | [
"humans (homo)",
"homo (humans)",
"macrobiotus sapiens",
"hominoidea (apes (hominoidea))",
"hominidae (great apes)",
"primate (primates)",
"ape (hominoidea) (hominoidea)",
"apes (hominoidea) (hominoidea)",
"homininae (homo/pan/gorilla group)",
"great apes (hominidae)"
] | Given the context 'Also considering the major socioeconomic impact of Ascaris and ascariasis in humans and pigs [30]–[32], several characteristics, including the large size of the adult worm (providing the opportunity of investigating individual organ systems and tissues), the ability to maintain Ascaris in the pig, store eggs and culture larvae in vitro for relatively long periods of time (months to years)', answer the user's query. |
What is the biomedical concept corresponding to 'pigs'? | [
"pig (sus scrofa) (sus scrofa)",
"pigs (sus scrofa) (sus scrofa)",
"swine (sus scrofa)",
"sus scrofa (pigs (sus scrofa))",
"wild boar (sus scrofa)"
] | [
"domestic pig (sus scrofa domesticus)",
"pigs (suidae) (suidae)",
"suidae (pigs (suidae))",
"boars (suidae)",
"sus domestica (sus scrofa domesticus)",
"sus domesticus (sus scrofa domesticus)",
"sus scrofa domestica (sus scrofa domesticus)",
"sus scrofa domesticus (sus scrofa domestica)",
"guinea pig... | Given the context 'Also considering the major socioeconomic impact of Ascaris and ascariasis in humans and pigs [30]–[32], several characteristics, including the large size of the adult worm (providing the opportunity of investigating individual organ systems and tissues), the ability to maintain Ascaris in the pig, store eggs and culture larvae in vitro for relatively long periods of time (months to years)', answer the user's query. |
What is the biomedical concept corresponding to 'pig'? | [
"pig (sus scrofa) (sus scrofa)",
"pigs (sus scrofa) (sus scrofa)",
"sus scrofa (pigs (sus scrofa))",
"swine (sus scrofa)",
"wild boar (sus scrofa)"
] | [
"domestic pig (sus scrofa domesticus)",
"pigs (suidae) (suidae)",
"suidae (pigs (suidae))",
"pignus",
"sus domesticus (sus scrofa domesticus)",
"sus domestica (sus scrofa domesticus)",
"guinea pig (cavia porcellus)",
"sus scrofa domestica (sus scrofa domesticus)",
"sus scrofa domesticus (sus scrofa ... | Given the context 'Also considering the major socioeconomic impact of Ascaris and ascariasis in humans and pigs [30]–[32], several characteristics, including the large size of the adult worm (providing the opportunity of investigating individual organ systems and tissues), the ability to maintain Ascaris in the pig, store eggs and culture larvae in vitro for relatively long periods of time (months to years)', answer the user's query. |
What is the biomedical concept corresponding to 'pigs'? | [
"pig (sus scrofa) (sus scrofa)",
"pigs (sus scrofa) (sus scrofa)",
"swine (sus scrofa)",
"sus scrofa (pigs (sus scrofa))",
"wild boar (sus scrofa)"
] | [
"domestic pig (sus scrofa domesticus)",
"pigs (suidae) (suidae)",
"suidae (pigs (suidae))",
"boars (suidae)",
"sus domestica (sus scrofa domesticus)",
"sus domesticus (sus scrofa domesticus)",
"sus scrofa domestica (sus scrofa domesticus)",
"sus scrofa domesticus (sus scrofa domestica)",
"guinea pig... | Given the context 'In the present study, Ascaris from pigs was used to study molecules abundantly transcribed in the infective third-stage larva (L3).', answer the user's query. |
What is the biomedical concept corresponding to 'human'? | [
"human (homo sapiens)",
"homo sapiens (human)"
] | [
"humans (homo)",
"homo (humans)",
"macrobiotus sapiens",
"primate (primates)",
"hominoidea (apes (hominoidea))",
"hominidae (great apes)",
"ape (hominoidea) (hominoidea)",
"kingdom",
"apes (hominoidea) (hominoidea)",
"homininae (homo/pan/gorilla group)"
] | Given the context 'Following the oral ingestion of Ascaris eggs by the host (human or pig), L3s are released and then invade/penetrate predominantly the caecal wall', answer the user's query. |
What is the biomedical concept corresponding to 'pig'? | [
"pig (sus scrofa) (sus scrofa)",
"pigs (sus scrofa) (sus scrofa)",
"sus scrofa (pigs (sus scrofa))",
"swine (sus scrofa)",
"wild boar (sus scrofa)"
] | [
"domestic pig (sus scrofa domesticus)",
"pigs (suidae) (suidae)",
"suidae (pigs (suidae))",
"pignus",
"sus domesticus (sus scrofa domesticus)",
"sus domestica (sus scrofa domesticus)",
"guinea pig (cavia porcellus)",
"sus scrofa domestica (sus scrofa domesticus)",
"sus scrofa domesticus (sus scrofa ... | Given the context 'Following the oral ingestion of Ascaris eggs by the host (human or pig), L3s are released and then invade/penetrate predominantly the caecal wall', answer the user's query. |
What is the biomedical concept corresponding to 'c. elegans'? | [
"caenorhabditis elegans (rhabditis elegans)",
"rhabditis elegans (caenorhabditis elegans)"
] | [
"elegans subgroup (in: flies)",
"drosophila elegans",
"theocolax elegans",
"cyclostrongylus elegans",
"polyzonia elegans",
"actinomucor elegans var. elegans",
"elegans subgroup (in: mosquitos)",
"bactris elegans",
"sipha elegans",
"urocitellus elegans elegans (spermophilus elegans elegans)"
] | Given the context 'Here, we constructed an L3-enriched cDNA library using the method of suppressive-subtractive hybridization (SSH), explored transcription of a representative subset of molecules by microarray analysis and conducted bioinformatic analyses to characterize these molecules, map them to biochemical pathways and predict genetic interactions based on comparisons with C. elegans and/or other organisms.
', answer the user's query. |
What is the biomedical concept corresponding to 'pigs'? | [
"pig (sus scrofa) (sus scrofa)",
"pigs (sus scrofa) (sus scrofa)",
"swine (sus scrofa)",
"sus scrofa (pigs (sus scrofa))",
"wild boar (sus scrofa)"
] | [
"domestic pig (sus scrofa domesticus)",
"pigs (suidae) (suidae)",
"suidae (pigs (suidae))",
"boars (suidae)",
"sus domestica (sus scrofa domesticus)",
"sus domesticus (sus scrofa domesticus)",
"sus scrofa domestica (sus scrofa domesticus)",
"sus scrofa domesticus (sus scrofa domestica)",
"guinea pig... | Given the context 'Materials and Methods
Production of Different Developmental Stages of Ascaris
Experimental pigs (8–12 weeks of age) were purchased from and maintained in the Experimental Animal Center of South China Agricultural University.', answer the user's query. |
What is the biomedical concept corresponding to 'pigs'? | [
"pig (sus scrofa) (sus scrofa)",
"pigs (sus scrofa) (sus scrofa)",
"swine (sus scrofa)",
"sus scrofa (pigs (sus scrofa))",
"wild boar (sus scrofa)"
] | [
"domestic pig (sus scrofa domesticus)",
"pigs (suidae) (suidae)",
"suidae (pigs (suidae))",
"boars (suidae)",
"sus domestica (sus scrofa domesticus)",
"sus domesticus (sus scrofa domesticus)",
"sus scrofa domestica (sus scrofa domesticus)",
"sus scrofa domesticus (sus scrofa domestica)",
"guinea pig... | Given the context 'These pigs were treated humanely, according to the Animal Ethics procedures and guidelines of the People's Republic of China.', answer the user's query. |
What is the biomedical concept corresponding to 'pigs'? | [
"pig (sus scrofa) (sus scrofa)",
"pigs (sus scrofa) (sus scrofa)",
"swine (sus scrofa)",
"sus scrofa (pigs (sus scrofa))",
"wild boar (sus scrofa)"
] | [
"domestic pig (sus scrofa domesticus)",
"pigs (suidae) (suidae)",
"suidae (pigs (suidae))",
"boars (suidae)",
"sus domestica (sus scrofa domesticus)",
"sus domesticus (sus scrofa domesticus)",
"sus scrofa domestica (sus scrofa domesticus)",
"sus scrofa domesticus (sus scrofa domestica)",
"guinea pig... | Given the context 'Adult worms (males and females) of A. suum were collected from the small intestines of pigs from an abattoir in Shenzhen, China.', answer the user's query. |
What is the biomedical concept corresponding to 'pigs'? | [
"pig (sus scrofa) (sus scrofa)",
"pigs (sus scrofa) (sus scrofa)",
"swine (sus scrofa)",
"sus scrofa (pigs (sus scrofa))",
"wild boar (sus scrofa)"
] | [
"domestic pig (sus scrofa domesticus)",
"pigs (suidae) (suidae)",
"suidae (pigs (suidae))",
"boars (suidae)",
"sus domestica (sus scrofa domesticus)",
"sus domesticus (sus scrofa domesticus)",
"sus scrofa domestica (sus scrofa domesticus)",
"sus scrofa domesticus (sus scrofa domestica)",
"guinea pig... | Given the context 'Following the experimental infection of helminth-free pigs with infective Ascaris eggs as described previously [39], the L3s from livers and in lungs as well as L4s in intestines were isolated according to an established method [40].', answer the user's query. |
What is the biomedical concept corresponding to 'escherichia coli'? | [
"e. coli (escherichia coli)",
"bacterium coli (escherichia coli)",
"bacillus coli (escherichia coli)",
"escherichia coli (escherichia/shigella coli)",
"enterococcus coli (escherichia coli)",
"escherichia/shigella coli (escherichia coli)",
"bacterium coli commune (escherichia coli)"
] | [
"escherichia",
"escherichia sp.",
"unspecified coliform bacterium",
"colimonas (candidatus colimonas)",
"escherichia coli 1a",
"escherichia coli c",
"colibacter",
"escherichia coli 9.1796",
"candidatus colimonas (colimonas)",
"enterobacteria (enterobacteriaceae)"
] | Given the context 'The cDNA obtained following SSH was cloned into the pGEM-T Easy plasmid vector (Promega) and competent Escherichia coli (JM109) transformed.', answer the user's query. |
What is the biomedical concept corresponding to 'pig'? | [
"pig (sus scrofa) (sus scrofa)",
"pigs (sus scrofa) (sus scrofa)",
"sus scrofa (pigs (sus scrofa))",
"swine (sus scrofa)",
"wild boar (sus scrofa)"
] | [
"domestic pig (sus scrofa domesticus)",
"pigs (suidae) (suidae)",
"suidae (pigs (suidae))",
"pignus",
"sus domesticus (sus scrofa domesticus)",
"sus domestica (sus scrofa domesticus)",
"guinea pig (cavia porcellus)",
"sus scrofa domestica (sus scrofa domesticus)",
"sus scrofa domesticus (sus scrofa ... | Given the context 'Labeling of cDNA Probes with Fluorescent Dyes, and Microarray Analysis
The cDNAs produced from total RNA from A. suum eggs, infective L3s, L3s isolated from pig liver or lung, fourth-stage larvae (L4s), adult males or females [as described in the section ‘Construction of the cDNA Library by Subtractive-Suppressive Hybridization (SSH)’] were labeled with cyanine dyes.', answer the user's query. |
What is the biomedical concept corresponding to 'bovine'? | [
"bovine (bos taurus)",
"bos bovis (bos taurus)",
"cow (bos taurus) (bos taurus)",
"domestic cattle (bos taurus)",
"domestic cow (bos taurus)",
"bos taurus (bos primigenius taurus)",
"bos primigenius taurus (bos taurus)",
"ox (bos taurus) (bos taurus)",
"dairy cow (bos taurus)"
] | [
"cattle (bos)",
"bos (cattle)",
"bovidae",
"bos taurus indicus (bos indicus)",
"boveria",
"bos sp.",
"bos indicus (bos primigenius indicus)",
"bos primigenius indicus (bos indicus)",
"bos taurus x bos indicus (bos indicus x bos taurus)",
"beefalo (bos taurus x bison bison)"
] | Given the context 'Microarray slides were incubated with a pre-hybridization solution [5×SSC, 1% bovine serum albumin (BSA), 0.1% sodium dodecyl-sulphate (SDS)] for 6 h at 42°C.', answer the user's query. |
What is the biomedical concept corresponding to 'c. elegans'? | [
"caenorhabditis elegans (rhabditis elegans)",
"rhabditis elegans (caenorhabditis elegans)"
] | [
"elegans subgroup (in: flies)",
"drosophila elegans",
"theocolax elegans",
"cyclostrongylus elegans",
"polyzonia elegans",
"actinomucor elegans var. elegans",
"elegans subgroup (in: mosquitos)",
"bactris elegans",
"sipha elegans",
"urocitellus elegans elegans (spermophilus elegans elegans)"
] | Given the context 'Following the processing of the sequences (i.e., removal of vector sequences, quality assurance and clustering), contigs or singletons from individual clusters were subjected to BLASTx (NCBI: www.ncbi.nlm.nih.gov) and BLASTn (EMBL-EBI Parasite Genome Blast Server: www.ebi.ac.uk) analysis to identify putative homologues in C. elegans, other nematodes and other organisms (e-value of ≤1e-05).', answer the user's query. |
What is the biomedical concept corresponding to 'c. elegans'? | [
"caenorhabditis elegans (rhabditis elegans)",
"rhabditis elegans (caenorhabditis elegans)"
] | [
"elegans subgroup (in: flies)",
"drosophila elegans",
"theocolax elegans",
"cyclostrongylus elegans",
"polyzonia elegans",
"actinomucor elegans var. elegans",
"elegans subgroup (in: mosquitos)",
"bactris elegans",
"sipha elegans",
"urocitellus elegans elegans (spermophilus elegans elegans)"
] | Given the context 'WormBase (www.wormbase.org) was interrogated extensively for relevant information on C. elegans homologues/orthologues, including RNAi phenotypic, transcriptomic, proteomic and interactomic data.', answer the user's query. |
What is the biomedical concept corresponding to 'c. elegans'? | [
"caenorhabditis elegans (rhabditis elegans)",
"rhabditis elegans (caenorhabditis elegans)"
] | [
"elegans subgroup (in: flies)",
"drosophila elegans",
"theocolax elegans",
"cyclostrongylus elegans",
"polyzonia elegans",
"actinomucor elegans var. elegans",
"elegans subgroup (in: mosquitos)",
"bactris elegans",
"sipha elegans",
"urocitellus elegans elegans (spermophilus elegans elegans)"
] | Given the context 'ESTs with homologues/orthologues in C. elegans and other nematodes were also subjected to analysis employing the KEGG Orthology-Based Annotation System (KOBAS) (www.kobas.cbi.pku.edu.cn), which predicts the biochemical pathways in which molecules are involved.', answer the user's query. |
What is the biomedical concept corresponding to 'c. elegans'? | [
"caenorhabditis elegans (rhabditis elegans)",
"rhabditis elegans (caenorhabditis elegans)"
] | [
"elegans subgroup (in: flies)",
"drosophila elegans",
"theocolax elegans",
"cyclostrongylus elegans",
"polyzonia elegans",
"actinomucor elegans var. elegans",
"elegans subgroup (in: mosquitos)",
"bactris elegans",
"sipha elegans",
"urocitellus elegans elegans (spermophilus elegans elegans)"
] | Given the context 'The open reading frames (ORFs) inferred from selected ESTs with orthologues in C. elegans were also subjected to “secretome analysis” using the program SignalP v.2.0 www.cbs.dtu.dk/services/SignalP/), employing both the neural network and hidden Markov models to predict signal peptides and/or anchors [46]–[48].', answer the user's query. |
What is the biomedical concept corresponding to 'c. elegans'? | [
"caenorhabditis elegans (rhabditis elegans)",
"rhabditis elegans (caenorhabditis elegans)"
] | [
"elegans subgroup (in: flies)",
"drosophila elegans",
"theocolax elegans",
"cyclostrongylus elegans",
"polyzonia elegans",
"actinomucor elegans var. elegans",
"elegans subgroup (in: mosquitos)",
"bactris elegans",
"sipha elegans",
"urocitellus elegans elegans (spermophilus elegans elegans)"
] | Given the context 'The method established by Zhong and Sternberg [53] was used to predict the interactions for C. elegans orthologues of the L3-enriched molecules from Ascaris.', answer the user's query. |
What is the biomedical concept corresponding to 'fruitfly'? | [
"fruit fly (drosophila melanogaster)"
] | [
"fruit fly (drosophila <flies,genus>)",
"fruit flies (drosophila <flies,genus>)",
"flies (diptera)",
"diptera (flies)",
"drosophila <flies,subgenus> (drosophila)",
"drosophila <flies,genus> (fruit flies)",
"drosophila (drosophila <flies,subgenus>)",
"drosophila (drosophila <flies,genus>)",
"drosophi... | Given the context 'In brief, interaction, phenotypic, expression and gene ontology data from fruitfly, yeast, mouse and human were integrated using a naïve Bayesian model to predict genetic interactions among C. elegans genes ([45],[53]; Zhong and Sternberg, unpublished).', answer the user's query. |
What is the biomedical concept corresponding to 'yeast'? | [
"saccharomyces cerevisiae (saccharomyces cerevisiae (desm.) meyen ex e.c. hansen, 1883)",
"saccharomyces cerevisiae (desm.) meyen ex e.c. hansen, 1883 (saccharomyces cerevisiae)",
"baker's yeast (saccharomyces cerevisiae)",
"mycoderma cerevisiae (saccharomyces cerevisiae)"
] | [
"true yeasts (saccharomycotina)",
"saccharomycetes (hemiascomycetes)",
"saccharomyces sp.",
"candida/saccharomycetales (candida/saccharomycales clade)",
"budding yeasts & others (saccharomycotina)",
"saccharomyceta",
"saccharomycodes",
"saccharomyces cerevisiae or paradoxus (saccharomyces cf. cerevisi... | Given the context 'In brief, interaction, phenotypic, expression and gene ontology data from fruitfly, yeast, mouse and human were integrated using a naïve Bayesian model to predict genetic interactions among C. elegans genes ([45],[53]; Zhong and Sternberg, unpublished).', answer the user's query. |
What is the biomedical concept corresponding to 'mouse'? | [
"mouse (mus musculus)",
"house mouse (mus musculus)",
"mus musculus (house mouse)"
] | [
"mouse (mus <genus>)",
"mice (mus <genus>) (mus <genus>)",
"mus <genus> (mice (mus <genus>))",
"mice (mus sp.) (mus sp.)",
"mus musculus musculus (eastern european house mouse)",
"eastern european house mouse (mus musculus musculus)",
"western european house mouse (mus musculus domesticus)",
"mus sp. ... | Given the context 'In brief, interaction, phenotypic, expression and gene ontology data from fruitfly, yeast, mouse and human were integrated using a naïve Bayesian model to predict genetic interactions among C. elegans genes ([45],[53]; Zhong and Sternberg, unpublished).', answer the user's query. |
What is the biomedical concept corresponding to 'human'? | [
"human (homo sapiens)",
"homo sapiens (human)"
] | [
"humans (homo)",
"homo (humans)",
"macrobiotus sapiens",
"primate (primates)",
"hominoidea (apes (hominoidea))",
"hominidae (great apes)",
"ape (hominoidea) (hominoidea)",
"kingdom",
"apes (hominoidea) (hominoidea)",
"homininae (homo/pan/gorilla group)"
] | Given the context 'In brief, interaction, phenotypic, expression and gene ontology data from fruitfly, yeast, mouse and human were integrated using a naïve Bayesian model to predict genetic interactions among C. elegans genes ([45],[53]; Zhong and Sternberg, unpublished).', answer the user's query. |
What is the biomedical concept corresponding to 'c. elegans'? | [
"caenorhabditis elegans (rhabditis elegans)",
"rhabditis elegans (caenorhabditis elegans)"
] | [
"elegans subgroup (in: flies)",
"drosophila elegans",
"theocolax elegans",
"cyclostrongylus elegans",
"polyzonia elegans",
"actinomucor elegans var. elegans",
"elegans subgroup (in: mosquitos)",
"bactris elegans",
"sipha elegans",
"urocitellus elegans elegans (spermophilus elegans elegans)"
] | Given the context 'In brief, interaction, phenotypic, expression and gene ontology data from fruitfly, yeast, mouse and human were integrated using a naïve Bayesian model to predict genetic interactions among C. elegans genes ([45],[53]; Zhong and Sternberg, unpublished).', answer the user's query. |
What is the biomedical concept corresponding to 'c. elegans'? | [
"caenorhabditis elegans (rhabditis elegans)",
"rhabditis elegans (caenorhabditis elegans)"
] | [
"elegans subgroup (in: flies)",
"drosophila elegans",
"theocolax elegans",
"cyclostrongylus elegans",
"polyzonia elegans",
"actinomucor elegans var. elegans",
"elegans subgroup (in: mosquitos)",
"bactris elegans",
"sipha elegans",
"urocitellus elegans elegans (spermophilus elegans elegans)"
] | Given the context 'Of 56 molecules (61.5%) with significant similarity to sequences other than A. suum in the databases interrogated, 50 (54.9%) had C. elegans or C. briggsae homologues, and six had similarity to ESTs already sequenced from ascaridoid and/or other parasitic nematodes, and/or other organisms (Table 1).', answer the user's query. |
What is the biomedical concept corresponding to 'c. briggsae'? | [
"rhabditis briggsae (caenorhabditis briggsae)",
"caenorhabditis briggsae (rhabditis briggsae)"
] | [
"histiogamphelus briggsii",
"tomicodon briggsi",
"pseudochaetosphaeronema briggsiae",
"sabacon briggsi",
"cidariophanes brigitta",
"triadothrips briga",
"ectopsocus briggsi",
"papilio brigitta (eurema brigitta)",
"rasbora brigittae (boraras brigittae)",
"congopanchax brichardi"
] | Given the context 'Of 56 molecules (61.5%) with significant similarity to sequences other than A. suum in the databases interrogated, 50 (54.9%) had C. elegans or C. briggsae homologues, and six had similarity to ESTs already sequenced from ascaridoid and/or other parasitic nematodes, and/or other organisms (Table 1).', answer the user's query. |
What is the biomedical concept corresponding to 'c. elegans'? | [
"caenorhabditis elegans (rhabditis elegans)",
"rhabditis elegans (caenorhabditis elegans)"
] | [
"elegans subgroup (in: flies)",
"drosophila elegans",
"theocolax elegans",
"cyclostrongylus elegans",
"polyzonia elegans",
"actinomucor elegans var. elegans",
"elegans subgroup (in: mosquitos)",
"bactris elegans",
"sipha elegans",
"urocitellus elegans elegans (spermophilus elegans elegans)"
] | Given the context 'A focused KOBAS analysis inferred the 50 C. elegans orthologues/homologues to be involved in apoptosis and insulin signaling (2%), ATP synthesis (2%), carbon metabolism (6%), fatty acid biosynthesis (2%), gap junction (2%), glucose metabolism (6%) or porphyrin metabolism (2%), although 34 (68%) of them could not be mapped to a specific metabolic pathway (Table 2).', answer the user's query. |
What is the biomedical concept corresponding to 'c. elegans'? | [
"caenorhabditis elegans (rhabditis elegans)",
"rhabditis elegans (caenorhabditis elegans)"
] | [
"elegans subgroup (in: flies)",
"drosophila elegans",
"theocolax elegans",
"cyclostrongylus elegans",
"polyzonia elegans",
"actinomucor elegans var. elegans",
"elegans subgroup (in: mosquitos)",
"bactris elegans",
"sipha elegans",
"urocitellus elegans elegans (spermophilus elegans elegans)"
] | Given the context 'Functionally, 17 (34%) of the 50 molecules were associated with (non-wild-type) RNAi phenotypes in C. elegans, the majority displaying embryonic lethality (Emb) (13 types; 58.8%), larval arrest (Lva) (23.5%) and larval lethality (Lvl) (47%) (Table 2).
', answer the user's query. |
What is the biomedical concept corresponding to 'c. elegans'? | [
"caenorhabditis elegans (rhabditis elegans)",
"rhabditis elegans (caenorhabditis elegans)"
] | [
"elegans subgroup (in: flies)",
"drosophila elegans",
"theocolax elegans",
"cyclostrongylus elegans",
"polyzonia elegans",
"actinomucor elegans var. elegans",
"elegans subgroup (in: mosquitos)",
"bactris elegans",
"sipha elegans",
"urocitellus elegans elegans (spermophilus elegans elegans)"
] | Given the context 'Extending this analysis, a relatively complex genetic interaction network was predicted for the 17 C. elegans orthologues (i.e., with non-wild-type RNAi phenotypes) (see Table S2).', answer the user's query. |
What is the biomedical concept corresponding to 'c. elegans'? | [
"caenorhabditis elegans (rhabditis elegans)",
"rhabditis elegans (caenorhabditis elegans)"
] | [
"elegans subgroup (in: flies)",
"drosophila elegans",
"theocolax elegans",
"cyclostrongylus elegans",
"polyzonia elegans",
"actinomucor elegans var. elegans",
"elegans subgroup (in: mosquitos)",
"bactris elegans",
"sipha elegans",
"urocitellus elegans elegans (spermophilus elegans elegans)"
] | Given the context 'Statistically highly significant interactions were predicted for nine of the C. elegans genes; the top five interactors are displayed in Fig.', answer the user's query. |
What is the biomedical concept corresponding to 'c. elegans'? | [
"caenorhabditis elegans (rhabditis elegans)",
"rhabditis elegans (caenorhabditis elegans)"
] | [
"elegans subgroup (in: flies)",
"drosophila elegans",
"theocolax elegans",
"cyclostrongylus elegans",
"polyzonia elegans",
"actinomucor elegans var. elegans",
"elegans subgroup (in: mosquitos)",
"bactris elegans",
"sipha elegans",
"urocitellus elegans elegans (spermophilus elegans elegans)"
] | Given the context 'The gene ontology categories for eight selected C. elegans genes (F33D11.10, F55A12.8, kin-2, mec-12, mup-2, pab-1, rpl-22 and T21B10.2) included: embryonic development, egg hatching, larval development and/or growth.', answer the user's query. |
What is the biomedical concept corresponding to 'c. elegans'? | [
"caenorhabditis elegans (rhabditis elegans)",
"rhabditis elegans (caenorhabditis elegans)"
] | [
"elegans subgroup (in: flies)",
"drosophila elegans",
"theocolax elegans",
"cyclostrongylus elegans",
"polyzonia elegans",
"actinomucor elegans var. elegans",
"elegans subgroup (in: mosquitos)",
"bactris elegans",
"sipha elegans",
"urocitellus elegans elegans (spermophilus elegans elegans)"
] | Given the context 'The C. elegans homologue egl-3 was predicted to be involved in proteolysis (see www.wormbase.org).', answer the user's query. |
What is the biomedical concept corresponding to 'c. elegans'? | [
"caenorhabditis elegans (rhabditis elegans)",
"rhabditis elegans (caenorhabditis elegans)"
] | [
"elegans subgroup (in: flies)",
"drosophila elegans",
"theocolax elegans",
"cyclostrongylus elegans",
"polyzonia elegans",
"actinomucor elegans var. elegans",
"elegans subgroup (in: mosquitos)",
"bactris elegans",
"sipha elegans",
"urocitellus elegans elegans (spermophilus elegans elegans)"
] | Given the context 'All nine C. elegans orthologues were predicted to interact directly with a total of 296 (range: 5–75) other genes and, in particular, a direct genetic interaction was predicted between pab-1 and T21B10.2 (Fig. 2).', answer the user's query. |
What is the biomedical concept corresponding to 'c. elegans'? | [
"caenorhabditis elegans (rhabditis elegans)",
"rhabditis elegans (caenorhabditis elegans)"
] | [
"elegans subgroup (in: flies)",
"drosophila elegans",
"theocolax elegans",
"cyclostrongylus elegans",
"polyzonia elegans",
"actinomucor elegans var. elegans",
"elegans subgroup (in: mosquitos)",
"bactris elegans",
"sipha elegans",
"urocitellus elegans elegans (spermophilus elegans elegans)"
] | Given the context 'The focus was on comparisons with C. elegans homologues/orthologues, because the entire genome sequence of this nematode is known [9] and because there is a wealth of information on the localization and functionality of its molecules (www.wormbase.org; http://elegans.bcgsc.bc.ca/knockout.shtml).', answer the user's query. |
What is the biomedical concept corresponding to 'c. elegans'? | [
"caenorhabditis elegans (rhabditis elegans)",
"rhabditis elegans (caenorhabditis elegans)"
] | [
"elegans subgroup (in: flies)",
"drosophila elegans",
"theocolax elegans",
"cyclostrongylus elegans",
"polyzonia elegans",
"actinomucor elegans var. elegans",
"elegans subgroup (in: mosquitos)",
"bactris elegans",
"sipha elegans",
"urocitellus elegans elegans (spermophilus elegans elegans)"
] | Given the context 'The functions of most genes in C. elegans have been assessed using RNAi (e.g., [14],[15],[17],[55],[56]) in the hermaphroditic stage, whereas there is a paucity of functional information available for Ascaris and other parasitic nematodes of animals', answer the user's query. |
What is the biomedical concept corresponding to 'c. elegans'? | [
"caenorhabditis elegans (rhabditis elegans)",
"rhabditis elegans (caenorhabditis elegans)"
] | [
"elegans subgroup (in: flies)",
"drosophila elegans",
"theocolax elegans",
"cyclostrongylus elegans",
"polyzonia elegans",
"actinomucor elegans var. elegans",
"elegans subgroup (in: mosquitos)",
"bactris elegans",
"sipha elegans",
"urocitellus elegans elegans (spermophilus elegans elegans)"
] | Given the context 'Of the 91 clusters of molecules categorized, 50 (54.9%) had C. elegans homologues/orthologues with loss-of-function phenotypes could be mapped to key pathways.', answer the user's query. |
What is the biomedical concept corresponding to 'c. elegans'? | [
"caenorhabditis elegans (rhabditis elegans)",
"rhabditis elegans (caenorhabditis elegans)"
] | [
"elegans subgroup (in: flies)",
"drosophila elegans",
"theocolax elegans",
"cyclostrongylus elegans",
"polyzonia elegans",
"actinomucor elegans var. elegans",
"elegans subgroup (in: mosquitos)",
"bactris elegans",
"sipha elegans",
"urocitellus elegans elegans (spermophilus elegans elegans)"
] | Given the context 'The statistically significant genetic interactions predicted for 9 of the 50 C. elegans orthologues [namely egl-3, F33D11.10, F55A12.8, kin-2, mec-12, mup-2, pab-1, rpl-22 and T21B10.2 ( = enol-1)] and the interaction network included genes encoding kinases, alpha-tubulins, enolases, troponin and other named and unnamed proteins.', answer the user's query. |
What is the biomedical concept corresponding to 'c. elegans'? | [
"caenorhabditis elegans (rhabditis elegans)",
"rhabditis elegans (caenorhabditis elegans)"
] | [
"elegans subgroup (in: flies)",
"drosophila elegans",
"theocolax elegans",
"cyclostrongylus elegans",
"polyzonia elegans",
"actinomucor elegans var. elegans",
"elegans subgroup (in: mosquitos)",
"bactris elegans",
"sipha elegans",
"urocitellus elegans elegans (spermophilus elegans elegans)"
] | Given the context 'Eight of these molecules (enol-1, pab-1, F33D11.10, rpl-22, F55A12.8 mec-12, mup-2 and kin-2) have known or predicted roles in embryonic and larval growth and development, gamete generation, locomotory behaviour or other biological processes in C. elegans (see www.wormbase.org).
', answer the user's query. |
What is the biomedical concept corresponding to 'c. elegans'? | [
"caenorhabditis elegans (rhabditis elegans)",
"rhabditis elegans (caenorhabditis elegans)"
] | [
"elegans subgroup (in: flies)",
"drosophila elegans",
"theocolax elegans",
"cyclostrongylus elegans",
"polyzonia elegans",
"actinomucor elegans var. elegans",
"elegans subgroup (in: mosquitos)",
"bactris elegans",
"sipha elegans",
"urocitellus elegans elegans (spermophilus elegans elegans)"
] | Given the context 'The enol-1 orthologue of C. elegans has been predicted to interact specifically with the polyadenylate binding protein gene, pab-1, inferred to be involved in coordinated gene transcription and expression during normal larval development', answer the user's query. |
What is the biomedical concept corresponding to 'c. elegans'? | [
"caenorhabditis elegans (rhabditis elegans)",
"rhabditis elegans (caenorhabditis elegans)"
] | [
"elegans subgroup (in: flies)",
"drosophila elegans",
"theocolax elegans",
"cyclostrongylus elegans",
"polyzonia elegans",
"actinomucor elegans var. elegans",
"elegans subgroup (in: mosquitos)",
"bactris elegans",
"sipha elegans",
"urocitellus elegans elegans (spermophilus elegans elegans)"
] | Given the context 'Present evidence suggests that the expression of PAB-1 is regulated by an oligo-pyrimidine tract in response to cell growth and relates to coordinated growth regulation in C. elegans [62].', answer the user's query. |
What is the biomedical concept corresponding to 'c. elegans'? | [
"caenorhabditis elegans (rhabditis elegans)",
"rhabditis elegans (caenorhabditis elegans)"
] | [
"elegans subgroup (in: flies)",
"drosophila elegans",
"theocolax elegans",
"cyclostrongylus elegans",
"polyzonia elegans",
"actinomucor elegans var. elegans",
"elegans subgroup (in: mosquitos)",
"bactris elegans",
"sipha elegans",
"urocitellus elegans elegans (spermophilus elegans elegans)"
] | Given the context 'Helicases are involved in a variety of RNA metabolic processes, including translation initiation, pre-mRNA splicing, pre-rRNA processing, rRNA maturation and RNA degradation [63], and are crucial for life cycle progression, sex determination and early embryogenesis in C. elegans [60].', answer the user's query. |
What is the biomedical concept corresponding to 'anisakis simplex'? | [
"herring worm (anisakis simplex)",
"anisakis simplex (ascaris simplex)",
"ascaris simplex (anisakis simplex)"
] | [
"anisakis simplex sensu lato",
"anisakis simplex complex",
"anisakis sp. sc-a",
"anisakis sp.",
"anisakis",
"anisakis sp. laaib",
"anisakis sp. laig",
"anisakis sp. sm-2005",
"anisakis sp. rah-2012",
"anisakis sp. ae1"
] | Given the context 'Several molecules involved in ATP synthesis and mitochondrial pathways (e.g., cytochrome oxidase c subunits 1, 2 and 3, ADP/ATP translocases, NADH dehydrogenases, ATPases and ATP synthetases) have been reported previously to be highly represented in the L3 stage of Anisakis simplex', answer the user's query. |
What is the biomedical concept corresponding to 'c. elegans'? | [
"caenorhabditis elegans (rhabditis elegans)",
"rhabditis elegans (caenorhabditis elegans)"
] | [
"elegans subgroup (in: flies)",
"drosophila elegans",
"theocolax elegans",
"cyclostrongylus elegans",
"polyzonia elegans",
"actinomucor elegans var. elegans",
"elegans subgroup (in: mosquitos)",
"bactris elegans",
"sipha elegans",
"urocitellus elegans elegans (spermophilus elegans elegans)"
] | Given the context 'Gene silencing of kin-2 in C. elegans leads to phenotypes, such as larval lethal (Lvl), larval arrest (Lva), body morphology defect (Bmd), dumpy (Dpy), uncoordinated (Unc) and sterile progeny (Stp) (www.wormbase.org), suggesting that its homologue in A. suum is central to larval maturation.', answer the user's query. |
What is the biomedical concept corresponding to 'c. elegans'? | [
"caenorhabditis elegans (rhabditis elegans)",
"rhabditis elegans (caenorhabditis elegans)"
] | [
"elegans subgroup (in: flies)",
"drosophila elegans",
"theocolax elegans",
"cyclostrongylus elegans",
"polyzonia elegans",
"actinomucor elegans var. elegans",
"elegans subgroup (in: mosquitos)",
"bactris elegans",
"sipha elegans",
"urocitellus elegans elegans (spermophilus elegans elegans)"
] | Given the context 'The KOBAS analysis predicted the protein KIN-2 to be involved in the insulin-signaling pathway, previously implicated in controlling the exit from dauer in C. elegans and the activation of L3s of the canine hookworm, Ancylostoma caninum, following exsheathment', answer the user's query. |
What is the biomedical concept corresponding to 'canine hookworm'? | [
"dog hookworm (ancylostoma caninum)",
"ancylostoma caninum (dog hookworm)"
] | [
"new world hookworm (necator americanus)",
"canine heartworm nematode (dirofilaria immitis)",
"ancylis kenneli",
"dog roundworm (toxocara canis)",
"ancylocnemis",
"ancylocaris",
"ancylostoma cf. caninum",
"ancylostoma ceylanicum",
"dog heartworm nematode (dirofilaria immitis)",
"ancylus sp. h29"
] | Given the context 'The KOBAS analysis predicted the protein KIN-2 to be involved in the insulin-signaling pathway, previously implicated in controlling the exit from dauer in C. elegans and the activation of L3s of the canine hookworm, Ancylostoma caninum, following exsheathment', answer the user's query. |
What is the biomedical concept corresponding to 'ancylostoma caninum'? | [
"ancylostoma caninum (dog hookworm)",
"dog hookworm (ancylostoma caninum)"
] | [
"ancylostoma cf. caninum",
"ancylostoma",
"ancylostoma ceylanicum",
"ancylostomatidae",
"dipylidium caninum (taenia canina)",
"ancylostoma braziliense",
"ancylostomia",
"ancylodes",
"ancylis sp. a",
"ancylocaris"
] | Given the context 'The KOBAS analysis predicted the protein KIN-2 to be involved in the insulin-signaling pathway, previously implicated in controlling the exit from dauer in C. elegans and the activation of L3s of the canine hookworm, Ancylostoma caninum, following exsheathment', answer the user's query. |
What is the biomedical concept corresponding to 'ancylostoma caninum'? | [
"ancylostoma caninum (dog hookworm)",
"dog hookworm (ancylostoma caninum)"
] | [
"ancylostoma cf. caninum",
"ancylostoma",
"ancylostoma ceylanicum",
"ancylostomatidae",
"dipylidium caninum (taenia canina)",
"ancylostoma braziliense",
"ancylostomia",
"ancylodes",
"ancylis sp. a",
"ancylocaris"
] | Given the context 'In a recent study, Brand and Hawdon [68] were able to inhibit (with a phosphoinositide-3-OH-kinase inhibitor) the activation of infective L3s of both of the hookworms Ancylostoma caninum and Ancylostoma ceylanicum via the insulin signaling pathway, thus lending some credence to the hypothesis that this pathway plays an critical role in regulating the transition from the free-living to the parasitic stage [68].', answer the user's query. |
What is the biomedical concept corresponding to 'ancylostoma ceylanicum'? | [
"ancylostoma ceylanicum"
] | [
"dog hookworm (ancylostoma caninum)",
"ancylostoma caninum (dog hookworm)",
"ancylus sp. e1.3",
"ancylis sp. a",
"ancylostoma braziliense",
"ancylus sp. e1.2",
"ancylus sp. rjd-2004",
"ancylus sp. e3.2",
"ancylus sp. e3.3",
"ancylus sp. e1.1"
] | Given the context 'In a recent study, Brand and Hawdon [68] were able to inhibit (with a phosphoinositide-3-OH-kinase inhibitor) the activation of infective L3s of both of the hookworms Ancylostoma caninum and Ancylostoma ceylanicum via the insulin signaling pathway, thus lending some credence to the hypothesis that this pathway plays an critical role in regulating the transition from the free-living to the parasitic stage [68].', answer the user's query. |
What is the biomedical concept corresponding to 'ancylostoma caninum'? | [
"ancylostoma caninum (dog hookworm)",
"dog hookworm (ancylostoma caninum)"
] | [
"ancylostoma cf. caninum",
"ancylostoma",
"ancylostoma ceylanicum",
"ancylostomatidae",
"dipylidium caninum (taenia canina)",
"ancylostoma braziliense",
"ancylostomia",
"ancylodes",
"ancylis sp. a",
"ancylocaris"
] | Given the context 'Recently, it has been proposed that transcriptional and feeding responses to serum-stimulation in Ancylostoma caninum are regulated by parallel systems, with the insulin signaling pathway playing a significant role in the ‘resumption of feeding’ in activated larvae [69].
', answer the user's query. |
What is the biomedical concept corresponding to 'h. contortus'? | [
"haemonchus contortus (red stomach worm)",
"red stomach worm (haemonchus contortus)",
"barber pole worm (haemonchus contortus)"
] | [
"polymorphus contortus (echinorhynchus contortus)",
"echinorhynchus contortus (polymorphus contortus)",
"bathyomphalus contortus (helix contorta)",
"helix contorta (bathyomphalus contortus)",
"mermessus contortus (tmeticus contortus)",
"rhinodrilus contortus",
"trichia contorta",
"tmeticus contortus (... | Given the context 'As already proposed for adult stages of H. contortus', answer the user's query. |
What is the biomedical concept corresponding to 'anisakis simplex'? | [
"herring worm (anisakis simplex)",
"anisakis simplex (ascaris simplex)",
"ascaris simplex (anisakis simplex)"
] | [
"anisakis simplex sensu lato",
"anisakis simplex complex",
"anisakis sp. sc-a",
"anisakis sp.",
"anisakis",
"anisakis sp. laaib",
"anisakis sp. laig",
"anisakis sp. sm-2005",
"anisakis sp. rah-2012",
"anisakis sp. ae1"
] | Given the context 'Other protein kinases, such as PEPCK, and phosphatases, were shown herein to be transcribed at high levels in the L3 stage compared with other developmental stages of A. suum (see Table 2), which is in accordance to findings reported recently for Anisakis simplex [65].', answer the user's query. |
What is the biomedical concept corresponding to 'c. elegans'? | [
"caenorhabditis elegans (rhabditis elegans)",
"rhabditis elegans (caenorhabditis elegans)"
] | [
"elegans subgroup (in: flies)",
"drosophila elegans",
"theocolax elegans",
"cyclostrongylus elegans",
"polyzonia elegans",
"actinomucor elegans var. elegans",
"elegans subgroup (in: mosquitos)",
"bactris elegans",
"sipha elegans",
"urocitellus elegans elegans (spermophilus elegans elegans)"
] | Given the context 'Approximately 60% of the transcripts enriched in the L3 stage of A. suum have homologues/orthologues in C. elegans.', answer the user's query. |
What is the biomedical concept corresponding to 'c. elegans'? | [
"caenorhabditis elegans (rhabditis elegans)",
"rhabditis elegans (caenorhabditis elegans)"
] | [
"elegans subgroup (in: flies)",
"drosophila elegans",
"theocolax elegans",
"cyclostrongylus elegans",
"polyzonia elegans",
"actinomucor elegans var. elegans",
"elegans subgroup (in: mosquitos)",
"bactris elegans",
"sipha elegans",
"urocitellus elegans elegans (spermophilus elegans elegans)"
] | Given the context 'Some caution is warranted in drawing conclusions regarding molecular mechanisms regulating the transition to parasitism in parasitic nematodes from information on C. elegans, as latter is a free-living nematode.', answer the user's query. |
What is the biomedical concept corresponding to 'patient'? | [
"human (homo sapiens)"
] | [
"clientister",
"personidae",
"theraps",
"proxys",
"perna",
"pera",
"pero",
"aides",
"personopsis",
"inquisitor"
] | Given the context 'Initial manifestations experienced by the patient, possibly due to obstruction, and including mild abdominal pain and nausea, occurred on the third day postoperatively.', answer the user's query. |
What is the biomedical concept corresponding to 'man'? | [
"human (homo sapiens)",
"homo sapiens (human)"
] | [
"humans (homo)",
"homo (humans)",
"manis",
"manisuris",
"macrobiotus sapiens",
"mammals (mammalia)",
"manotes",
"manica",
"manoa",
"neandertal man (homo sapiens neanderthalensis)"
] | Given the context 'Case presentation
An 80-year-old man was found to have early gastric cancer during his yearly check-up by gastrointestinal endoscopy.', answer the user's query. |
What is the biomedical concept corresponding to 'patient'? | [
"human (homo sapiens)"
] | [
"clientister",
"personidae",
"theraps",
"proxys",
"perna",
"pera",
"pero",
"aides",
"personopsis",
"inquisitor"
] | Given the context 'Postoperatively, the patient complained of an acidic feeling in his stomach; however, there were no remarkable abnormalities on biochemical examination of serum.', answer the user's query. |
What is the biomedical concept corresponding to 'patient'? | [
"human (homo sapiens)"
] | [
"clientister",
"personidae",
"theraps",
"proxys",
"perna",
"pera",
"pero",
"aides",
"personopsis",
"inquisitor"
] | Given the context 'However, on day 4, the patient started to complain of upper abdominal pain and developed a high grade fever (38°C).', answer the user's query. |
What is the biomedical concept corresponding to 'patient'? | [
"human (homo sapiens)"
] | [
"clientister",
"personidae",
"theraps",
"proxys",
"perna",
"pera",
"pero",
"aides",
"personopsis",
"inquisitor"
] | Given the context 'The patient remained in the intensive care unit for 5 days after re-operation, and was then transferred to the general ward.
', answer the user's query. |
What is the biomedical concept corresponding to 'pig'? | [
"pig (sus scrofa) (sus scrofa)",
"pigs (sus scrofa) (sus scrofa)",
"sus scrofa (pigs (sus scrofa))",
"swine (sus scrofa)",
"wild boar (sus scrofa)"
] | [
"domestic pig (sus scrofa domesticus)",
"pigs (suidae) (suidae)",
"suidae (pigs (suidae))",
"pignus",
"sus domesticus (sus scrofa domesticus)",
"sus domestica (sus scrofa domesticus)",
"guinea pig (cavia porcellus)",
"sus scrofa domestica (sus scrofa domesticus)",
"sus scrofa domesticus (sus scrofa ... | Given the context 'Indeed, Kolata demonstrated that the wounds made by the non-bladed trocar were narrower than those created by cutting tip trocars in a pig experimental model [4].', answer the user's query. |
What is the biomedical concept corresponding to 'patients'? | [
"human (homo sapiens)"
] | [
"clientister",
"theraps",
"personidae",
"proxys",
"perna",
"genus",
"aides",
"pero",
"inquisitor",
"plasmids"
] | Given the context 'However, it is sometimes difficult to completely close the defect, including the peritoneum, especially in obese patients.', answer the user's query. |
What is the biomedical concept corresponding to 'patients'? | [
"human (homo sapiens)"
] | [
"clientister",
"theraps",
"personidae",
"proxys",
"perna",
"genus",
"aides",
"pero",
"inquisitor",
"plasmids"
] | Given the context 'Moreover, special attention should be paid in patients with risk factors for port site hernia such as obesity, aggressive manipulation through the port sites, and prolonged surgery.
', answer the user's query. |
What is the biomedical concept corresponding to 'patients'? | [
"human (homo sapiens)"
] | [
"clientister",
"theraps",
"personidae",
"proxys",
"perna",
"genus",
"aides",
"pero",
"inquisitor",
"plasmids"
] | Given the context 'Careful management of the postoperative course is recommended especially for patients with risk factors such as obesity and extensive manipulation of the trocar during prolonged surgical duration.
', answer the user's query. |
What is the biomedical concept corresponding to 'patient'? | [
"human (homo sapiens)"
] | [
"clientister",
"personidae",
"theraps",
"proxys",
"perna",
"pera",
"pero",
"aides",
"personopsis",
"inquisitor"
] | Given the context 'Consent
Written informed consent was obtained from the patient for publication of this case report and any accompanying images.', answer the user's query. |
What is the biomedical concept corresponding to 'rat'? | [
"rat (rattus norvegicus) (rattus norvegicus)",
"rattus norvegicus (rats (rattus norvegicus))",
"rats (rattus norvegicus) (rattus norvegicus)"
] | [
"rats (rattus) (rattus)",
"rat (rattus) (rattus)",
"rattus (rats (rattus))",
"rats (rattus sp.) (rattus sp.)",
"house rat (rattus rattus)",
"rattus rattoides (rattus rattus)",
"rattus sp. (rats (rattus sp.))",
"mus rattus (rattus rattus)",
"black rat (rattus rattus)",
"roof rat (rattus rattus)"
] | Given the context 'Previously, we reported that some SSRIs possess high to moderate affinities for sigma-1 receptors in the rat brain.', answer the user's query. |
What is the biomedical concept corresponding to 'mice'? | [
"mouse (mus musculus)",
"house mouse (mus musculus)",
"mus musculus (house mouse)"
] | [
"mice (mus <genus>) (mus <genus>)",
"mouse (mus <genus>)",
"mus <genus> (mice (mus <genus>))",
"mice (mus sp.) (mus sp.)",
"eastern european house mouse (mus musculus musculus)",
"mus musculus musculus (eastern european house mouse)",
"western european house mouse (mus musculus domesticus)",
"mus sp. ... | Given the context 'Recently, we reported that fluvoxamine, but not paroxetine, significantly ameliorated cognitive deficits in mice after repeated phencyclidine administration, and that the effects of fluvoxamine were antagonized by co-administration of the selective sigma-1 receptor antagonist NE-100', answer the user's query. |
What is the biomedical concept corresponding to 'bovine'? | [
"bovine (bos taurus)",
"bos bovis (bos taurus)",
"cow (bos taurus) (bos taurus)",
"domestic cattle (bos taurus)",
"domestic cow (bos taurus)",
"bos taurus (bos primigenius taurus)",
"bos primigenius taurus (bos taurus)",
"ox (bos taurus) (bos taurus)",
"dairy cow (bos taurus)"
] | [
"cattle (bos)",
"bos (cattle)",
"bovidae",
"bos taurus indicus (bos indicus)",
"boveria",
"bos sp.",
"bos indicus (bos primigenius indicus)",
"bos primigenius indicus (bos indicus)",
"bos taurus x bos indicus (bos indicus x bos taurus)",
"beefalo (bos taurus x bison bison)"
] | Given the context 'Cell culture
PC12 sells (RIKEN Cell Bank, Tsukuba, Japan) were cultured at 37°C, 5% CO2 with Dulbecco's modified Eagle's medium (DMEM) supplemented with 5% heat-inactivated fetal bovine serum (FBS), 10% heat-inactivated horse serum, and 1% penicillin.', answer the user's query. |
What is the biomedical concept corresponding to 'horse'? | [
"horse (equus caballus)",
"domestic horse (equus caballus)",
"equine (equus caballus)",
"equus caballus (equus przewalskii forma caballus)"
] | [
"horses (equidae)",
"equidae (horses)",
"equus subg. equus (equus)",
"equus sp.",
"eques",
"rv-horse",
"equus ferus (equus caballus ferus)",
"horsetails (equisetidae)",
"equus subgen. sussemionus (equus)",
"equus caballus ferus (equus ferus)"
] | Given the context 'Cell culture
PC12 sells (RIKEN Cell Bank, Tsukuba, Japan) were cultured at 37°C, 5% CO2 with Dulbecco's modified Eagle's medium (DMEM) supplemented with 5% heat-inactivated fetal bovine serum (FBS), 10% heat-inactivated horse serum, and 1% penicillin.', answer the user's query. |
What is the biomedical concept corresponding to 'goat'? | [
"domestic goat (capra hircus)",
"goats (capra hircus)",
"goat (capra hircus) (capra hircus)",
"capra aegagrus hircus (capra hircus)",
"capra hircus (capra aegagrus hircus)"
] | [
"wild goat (capra aegagrus)",
"capra",
"capra aegagrus (capra hircus aegagrus)",
"capra hircus aegagrus (capra aegagrus)",
"capra sp.",
"capraita",
"capra aegagrus cretica (capra hircus cretica)",
"capra hircus cretica (capra aegagrus cretica)",
"capneidae",
"capra cretica (capra hircus cretica)"
... | Given the context 'Immunocytochemistry
Cells were fixed for 30 min at room temperature with 4% paraformaldehyde then permeabilized with 0.2% Triton and blocked with 1.5% normal goat serum, 0.1% bovine serum albumin (BSA) in 0.1 M phosphate-buffer saline for 1 h to reduce nonspecific binding.', answer the user's query. |
What is the biomedical concept corresponding to 'bovine'? | [
"bovine (bos taurus)",
"bos bovis (bos taurus)",
"cow (bos taurus) (bos taurus)",
"domestic cattle (bos taurus)",
"domestic cow (bos taurus)",
"bos taurus (bos primigenius taurus)",
"bos primigenius taurus (bos taurus)",
"ox (bos taurus) (bos taurus)",
"dairy cow (bos taurus)"
] | [
"cattle (bos)",
"bos (cattle)",
"bovidae",
"bos taurus indicus (bos indicus)",
"boveria",
"bos sp.",
"bos indicus (bos primigenius indicus)",
"bos primigenius indicus (bos indicus)",
"bos taurus x bos indicus (bos indicus x bos taurus)",
"beefalo (bos taurus x bison bison)"
] | Given the context 'Immunocytochemistry
Cells were fixed for 30 min at room temperature with 4% paraformaldehyde then permeabilized with 0.2% Triton and blocked with 1.5% normal goat serum, 0.1% bovine serum albumin (BSA) in 0.1 M phosphate-buffer saline for 1 h to reduce nonspecific binding.', answer the user's query. |
What is the biomedical concept corresponding to 'human'? | [
"human (homo sapiens)",
"homo sapiens (human)"
] | [
"humans (homo)",
"homo (humans)",
"macrobiotus sapiens",
"primate (primates)",
"hominoidea (apes (hominoidea))",
"hominidae (great apes)",
"ape (hominoidea) (hominoidea)",
"kingdom",
"apes (hominoidea) (hominoidea)",
"homininae (homo/pan/gorilla group)"
] | Given the context 'Our recent positron emission tomography (PET) study demonstrated that, after a single oral administration, fluvoxamine bound to sigma-1 receptors in the living human brain [45].', answer the user's query. |
Subsets and Splits
No community queries yet
The top public SQL queries from the community will appear here once available.