instruction stringlengths 209 946 | input stringlengths 96 1.45k | response stringlengths 3 12 |
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<Instruct>: Given the context 'Here, we demonstrate that the increase in translation factor concentration was readily detected in an asynchronous population of HCMV-infected primary human fibroblasts, abolished by prior UV inactivation of virus, and genetically dependent upon viral immediate-early genes.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [hcmv; human]
<Options>: A: herpes virus b (aka macacine alphaherpesvirus 1)
B: human herpesvirus type 5 (aka human betaherpesvirus 5)
C: human herpesvirus 8 (aka human gammaherpesvirus 8)
D: homo sapiens (human) (aka homo sapiens)
E: murine cytomegalovirus (aka murid betaherpesvirus 1)
F: macrobiotus sapiens
G: carcharhinus humani
H: human herpesvirus 6b (aka human betaherpesvirus 6b)
I: cardium humanum (aka glossus humanus)
J: great apes (aka hominidae)
K: None of the above. | [B; D] |
<Instruct>: Given the context 'Here, we demonstrate that the increase in translation factor concentration was readily detected in an asynchronous population of HCMV-infected primary human fibroblasts, abolished by prior UV inactivation of virus, and genetically dependent upon viral immediate-early genes.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [hcmv; human]
<Options>: A: japanese cytomegalovirus
B: carcharhinus humani
C: murine cytomegalovirus (aka murid betaherpesvirus 1)
D: human herpesvirus 5 (aka human betaherpesvirus 5)
E: human herpesvirus 6b (aka human betaherpesvirus 6b)
F: human body louse (aka pediculus humanus corporis)
G: pediculus humanus (human louse) (aka pediculus humanus)
H: rodent herpesvirus
I: human (aka homo sapiens)
J: macrobiotus sapiens
K: None of the above. | [D; I] |
<Instruct>: Given the context 'Here, we demonstrate that the increase in translation factor concentration was readily detected in an asynchronous population of HCMV-infected primary human fibroblasts, abolished by prior UV inactivation of virus, and genetically dependent upon viral immediate-early genes.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [hcmv; human]
<Options>: A: rodent herpesvirus
B: human body louse (aka pediculus humanus corporis)
C: japanese cytomegalovirus
D: macrobiotus sapiens
E: pediculus humanus (human louse) (aka pediculus humanus)
F: human herpesvirus 5 (aka human betaherpesvirus 5)
G: carcharhinus humani
H: human herpesvirus 6b (aka human betaherpesvirus 6b)
I: murine cytomegalovirus (aka murid betaherpesvirus 1)
J: None of the above. | [F; J] |
<Instruct>: Given the context 'Strikingly, while increased mRNA steady-state levels accompanied the rise in eIF4E and eIF4G protein levels, the overall abundance of PABP mRNA, together with the half-life of the polypeptide it encodes, remained relatively unchanged by HCMV infection.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [hcmv]
<Options>: A: human betaherpesvirus 5 (human herpesvirus type 5) (aka human betaherpesvirus 5)
B: murine cytomegalovirus (aka murid betaherpesvirus 1)
C: human betaherpesvirus 6a (human herpesvirus 6a) (aka human betaherpesvirus 6a)
D: human herpesvirus 5 strain ad169 (human cytomegalovirus (strain ad169)) (aka human herpesvirus 5 strain ad169)
E: cytomegalovirus
F: None of the above. | [A] |
<Instruct>: Given the context 'Instead, HCMV-induced PABP accumulation resulted from new protein synthesis and was sensitive to the mTORC1-selective inhibitor rapamycin, which interferes with phosphorylation of the mTORC1 substrate p70 S6K and the translational repressor 4E-BP1.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [hcmv]
<Options>: A: human herpesvirus 5 strain ad169 (human cytomegalovirus (strain ad169)) (aka human herpesvirus 5 strain ad169)
B: murine cytomegalovirus (aka murid betaherpesvirus 1)
C: human herpesvirus 1 (aka human alphaherpesvirus 1)
D: human betaherpesvirus 5 (human herpesvirus type 5) (aka human betaherpesvirus 5)
E: rodent herpesvirus
F: None of the above. | [D] |
<Instruct>: Given the context 'Finally, unlike the situation in alpha- or gammaherpesvirus-infected cells, where PABP is redistributed to nuclei, PABP accumulated in the cytoplasm of HCMV-infected cells.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [hcmv]
<Options>: A: herpesvirus m (aka saimiriine alphaherpesvirus 1)
B: japanese cytomegalovirus
C: human herpesvirus type 5 (aka human betaherpesvirus 5)
D: cytomegalovirus
E: unidentified cytomegalovirus
F: None of the above. | [C] |
<Instruct>: Given the context 'Thus, cytoplasmic PABP accumulation is translationally controlled in HCMV-infected cells via a mechanism requiring mTORC1-mediated inhibition of the cellular 4E-BP1 translational repressor.
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [hcmv]
<Options>: A: unidentified cytomegalovirus
B: cytomegalovirus
C: japanese cytomegalovirus
D: human cytomegalovirus (aka human betaherpesvirus 5)
E: human herpesvirus 5 strain ad169 (human cytomegalovirus (strain ad169)) (aka human herpesvirus 5 strain ad169)
F: None of the above. | [D] |
<Instruct>: Given the context 'A new model of Epstein-Barr virus infection reveals an important role for earlylytic viral protein expression in the development of lymphomas.
Epstein-Barr virus (EBV) infects cells in latent or lytic forms, but the roleof lytic infection in EBV-induced lymphomas is unclear.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [epstein-barr virus; ebv]
<Options>: A: rhesus epstein barr virus (aka macacine gammaherpesvirus 4)
B: blhv (aka bovine lymphotropic herpesvirus) (aka bovine lymphotropic herpesvirus)
C: bovine herpesvirus-1 (aka bovine alphaherpesvirus 1)
D: epstein-barr virus (strain raji) (aka human herpesvirus 4 strain raji)
E: epstein-barr virus type 1 (aka human herpesvirus 4 type 1)
F: human gammaherpesvirus 4 (human herpesvirus 4 (epstein-barr virus)) (aka human gammaherpesvirus 4)
G: bohnovirus
H: bovine lymphotropic herpesvirus (blhv (aka bovine lymphotropic herpesvirus))
I: bat herpesvirus
J: None of the above. | [F; F] |
<Instruct>: Given the context 'A new model of Epstein-Barr virus infection reveals an important role for earlylytic viral protein expression in the development of lymphomas.
Epstein-Barr virus (EBV) infects cells in latent or lytic forms, but the roleof lytic infection in EBV-induced lymphomas is unclear.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [epstein-barr virus; ebv]
<Options>: A: bohnovirus
B: beult virus
C: epstein-barr virus type 2 (aka human herpesvirus 4 type 2)
D: epstein-barr virus ebv (aka human gammaherpesvirus 4)
E: bovine herpesvirus 2 (aka bovine alphaherpesvirus 2)
F: gb virus
G: burke virus
H: bovine herpesvirus 1 (aka bovine alphaherpesvirus 1)
I: human herpesvirus 4 type 1 (epstein-barr virus type 1 ebv-1) (aka human herpesvirus 4 type 1)
J: None of the above. | [D; D] |
<Instruct>: Given the context 'Here, we have used anew humanized mouse model, in which both human fetal CD34(+) hematopoietic stemcells and thymus/liver tissue are transplanted, to compare EBV pathogenesis andlymphoma formation following infection with a lytic replication-defectiveBZLF1-deleted (Z-KO) virus or a lytically active BZLF1(+) control.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [mouse; human; ebv]
<Options>: A: beult virus
B: bohxovirus
C: mus molossinus (aka mus musculus molossinus)
D: mus musculus (house mouse) (aka mus musculus)
E: macedonian mouse (aka mus macedonicus)
F: hominidae (great apes) (aka hominidae)
G: carcharhinus humani
H: human (aka homo sapiens)
I: bovine lymphotropic herpesvirus (blhv (aka bovine lymphotropic herpesvirus))
J: bohxovirus oralis
K: neandertal (aka homo sapiens neanderthalensis)
L: western wild mouse (aka mus spretus)
M: humans (aka homo)
N: mus musculus domesticus (western european house mouse) (aka mus musculus domesticus)
O: human gammaherpesvirus 4 (human herpesvirus 4 (epstein-barr virus)) (aka human gammaherpesvirus 4)
P: None of the above. | [D; H; O] |
<Instruct>: Given the context 'Here, we have used anew humanized mouse model, in which both human fetal CD34(+) hematopoietic stemcells and thymus/liver tissue are transplanted, to compare EBV pathogenesis andlymphoma formation following infection with a lytic replication-defectiveBZLF1-deleted (Z-KO) virus or a lytically active BZLF1(+) control.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [mouse; human; ebv]
<Options>: A: mus terricolor (earth-colored mouse) (aka mus terricolor)
B: eastern european house mouse (aka mus musculus musculus)
C: epstein-barr virus (aka human gammaherpesvirus 4)
D: house mouse (aka mus musculus)
E: bat gammaherpesvirus
F: gb virus
G: bohnovirus
H: pediculus humanus humanus (aka pediculus humanus corporis)
I: carcharhinus humani
J: southeastern asian house mouse (aka mus musculus castaneus)
K: homo sapiens (human) (aka homo sapiens)
L: macedonian mouse (aka mus macedonicus)
M: macrobiotus sapiens
N: great apes (aka hominidae)
O: bohxovirus oralis
P: None of the above. | [D; K; C] |
<Instruct>: Given the context 'Here, we have used anew humanized mouse model, in which both human fetal CD34(+) hematopoietic stemcells and thymus/liver tissue are transplanted, to compare EBV pathogenesis andlymphoma formation following infection with a lytic replication-defectiveBZLF1-deleted (Z-KO) virus or a lytically active BZLF1(+) control.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [mouse; human; ebv]
<Options>: A: sphaeria humana (aka sordaria humana)
B: mus macedonicus (macedonian mouse) (aka mus macedonicus)
C: homo sapiens (human) (aka homo sapiens)
D: southeastern asian house mouse (aka mus musculus castaneus)
E: humans (aka homo)
F: western wild mouse (aka mus spretus)
G: bat gammaherpesvirus
H: mus musculus (house mouse) (aka mus musculus)
I: western european house mouse (aka mus musculus domesticus)
J: gb virus
K: bovine lymphotropic herpesvirus (blhv (aka bovine lymphotropic herpesvirus))
L: beult virus
M: pediculus humanus (human louse) (aka pediculus humanus)
N: epstein barr virus (aka human gammaherpesvirus 4)
O: macrobiotus sapiens
P: None of the above. | [H; C; N] |
<Instruct>: Given the context 'Specific immune responses against EBV-infected B cellswere generated in mice infected with either the control virus or the Z-KOvirus.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [ebv; mice]
<Options>: A: mus molossinus (aka mus musculus molossinus)
B: gb virus
C: western wild mouse (aka mus spretus)
D: mice (aka mus sp.) (aka mus sp.)
E: epstein-barr virus type 1 ebv-1 (aka human herpesvirus 4 type 1)
F: house mouse (aka mus musculus)
G: bovine torovirus
H: human herpesvirus 4 (epstein-barr virus) (aka human gammaherpesvirus 4)
I: beult virus
J: mus musculus musculus (eastern european house mouse) (aka mus musculus musculus)
K: None of the above. | [H; F] |
<Instruct>: Given the context 'Specific immune responses against EBV-infected B cellswere generated in mice infected with either the control virus or the Z-KOvirus.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [ebv; mice]
<Options>: A: epstein-barr virus (aka human gammaherpesvirus 4)
B: mouse (aka mus musculus)
C: burke virus
D: bat herpesvirus
E: mus famulus (servant mouse) (aka mus famulus)
F: mus terricolor (earth-colored mouse) (aka mus terricolor)
G: mus musculus domesticus (western european house mouse) (aka mus musculus domesticus)
H: mice (aka mus <genus>) (aka mus <genus>)
I: bohnovirus
J: bohwovirus
K: None of the above. | [A; B] |
<Instruct>: Given the context 'These results point to animportant role for lytic EBV infection in the development of B cell lymphomasin the context of an active host immune response.
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [ebv]
<Options>: A: bohwovirus
B: human herpesvirus 4 (epstein-barr virus) (aka human gammaherpesvirus 4)
C: bovine torovirus
D: bohxovirus
E: bat gammaherpesvirus
F: None of the above. | [B] |
<Instruct>: Given the context 'Successful vaccination strategies that protect aged mice from lethal challenge from influenza virus and heterologous severe acute respiratory syndrome coronavirus.
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [mice; severe acute respiratory syndrome coronavirus]
<Options>: A: swine acute diarrhea syndrome related coronavirus
B: mus terricolor (earth-colored mouse) (aka mus terricolor)
C: sars (aka severe acute respiratory syndrome-related coronavirus) (aka severe acute respiratory syndrome-related coronavirus)
D: mus macedonicus (macedonian mouse) (aka mus macedonicus)
E: sars-related bat coronavirus (aka bat sars-like coronavirus)
F: swine acute diarrhea syndrome coronavirus
G: mus <genus> (mice (aka mus <genus>))
H: house mouse (aka mus musculus)
I: sars virus (aka severe acute respiratory syndrome coronavirus)
J: southeastern asian house mouse (aka mus musculus castaneus)
K: None of the above. | [H; C] |
<Instruct>: Given the context 'Successful vaccination strategies that protect aged mice from lethal challenge from influenza virus and heterologous severe acute respiratory syndrome coronavirus.
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [mice; severe acute respiratory syndrome coronavirus]
<Options>: A: sars-related bat coronavirus (aka bat sars-like coronavirus)
B: mus terricolor (earth-colored mouse) (aka mus terricolor)
C: mus famulus (servant mouse) (aka mus famulus)
D: bat sars coronavirus (aka sars bat coronavirus)
E: sarsr-cov (aka severe acute respiratory syndrome-related coronavirus)
F: sars coronavirus as
G: mus macedonicus (macedonian mouse) (aka mus macedonicus)
H: southeastern asian house mouse (aka mus musculus castaneus)
I: swine acute diarrhea syndrome coronavirus
J: mouse (aka mus musculus)
K: None of the above. | [J; E] |
<Instruct>: Given the context 'Newly emerging viruses often circulate as a heterogeneous swarm in wild animal reservoirs prior to their emergence in humans, and their antigenic identities are often unknown until an outbreak situation.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [humans]
<Options>: A: homo sapiens (human) (aka homo sapiens)
B: pediculus humanus humanus (aka pediculus humanus corporis)
C: neanderthal (aka homo sapiens neanderthalensis)
D: gymnopleurus humanus
E: pediculus humanus (human louse) (aka pediculus humanus)
F: None of the above. | [A] |
<Instruct>: Given the context 'The newly emerging severe acute respiratory syndrome coronavirus (SARS-CoV) and reemerging influenza virus cause disproportionate disease in the aged, who are also notoriously difficult to successfully vaccinate, likely due to immunosenescence.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [severe acute respiratory syndrome coronavirus; sars-cov]
<Options>: A: recombinant sars coronavirus
B: sars-2 (aka severe acute respiratory syndrome coronavirus 2)
C: sars (aka severe acute respiratory syndrome-related coronavirus) (aka severe acute respiratory syndrome-related coronavirus)
D: sars-related bat coronavirus (aka bat sars-like coronavirus)
E: bat sars coronavirus (aka sars bat coronavirus)
F: sars virus (aka severe acute respiratory syndrome coronavirus)
G: None of the above. | [C; C] |
<Instruct>: Given the context 'The newly emerging severe acute respiratory syndrome coronavirus (SARS-CoV) and reemerging influenza virus cause disproportionate disease in the aged, who are also notoriously difficult to successfully vaccinate, likely due to immunosenescence.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [severe acute respiratory syndrome coronavirus; sars-cov]
<Options>: A: sars coronavirus as
B: sars coronavirus (aka severe acute respiratory syndrome coronavirus)
C: bat sars-related coronavirus (aka bat sars-like coronavirus)
D: sars-cov (urbani strain) (aka sars coronavirus urbani)
E: sars-related bat coronavirus (aka bat sars-like coronavirus)
F: sars2 (aka severe acute respiratory syndrome coronavirus 2)
G: sars-related coronavirus (aka severe acute respiratory syndrome-related coronavirus)
H: swine acute diarrhea syndrome coronavirus
I: None of the above. | [G; G] |
<Instruct>: Given the context 'From initial studies, we hypothesized that attenuated Venezuelan equine encephalitis virus (VEE) replicon particle (VRP) vaccine glycoproteins mediated vaccine failure in the aged.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [venezuelan equine encephalitis virus; vee]
<Options>: A: erve virus
B: equine abortion virus (aka equid alphaherpesvirus 1)
C: eastern equine encephalomyelitis virus (aka eastern equine encephalitis virus)
D: vee (aka venezuelan equine encephalitis virus) (aka venezuelan equine encephalitis virus)
E: vebetovirus
F: venezuelan equine encephalitis virus (strain trinidad donkey)
G: veia
H: tonate virus (venezuelan equine encephalitis virus iiib) (aka tonate virus)
I: venezuelan equine encephalitis virus (strain cpa201)
J: None of the above. | [D; D] |
<Instruct>: Given the context 'From initial studies, we hypothesized that attenuated Venezuelan equine encephalitis virus (VEE) replicon particle (VRP) vaccine glycoproteins mediated vaccine failure in the aged.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [venezuelan equine encephalitis virus; vee]
<Options>: A: vee (aka venezuelan equine encephalitis virus) (aka venezuelan equine encephalitis virus)
B: vebetovirus
C: equine encephalosis virus (equine encephalosis virus (eev)) (aka equine encephalosis virus)
D: venezuelan equine encephalitis virus iiib (aka tonate virus)
E: pixuna virus (venezuelan equine encephalitis virus iv) (aka pixuna virus)
F: venezuelan equine encephalitis virus (strain cpa201)
G: veia
H: erve virus
I: None of the above. | [A; A] |
<Instruct>: Given the context 'We then compared the efficacies of vaccines bearing attenuated (VRP(3014)) or wild-type VEE glycoproteins (VRP(3000)) in young and aged mice within novel models of severe SARS-CoV pathogenesis.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [vee; mice; sars-cov]
<Options>: A: mus molossinus (aka mus musculus molossinus)
B: recombinant sars coronavirus
C: mus musculus castaneus (southeastern asian house mouse) (aka mus musculus castaneus)
D: sars coronavirus as
E: sarsrcov (aka severe acute respiratory syndrome-related coronavirus)
F: mus macedonicus (macedonian mouse) (aka mus macedonicus)
G: bat sars-related coronavirus (aka bat sars-like coronavirus)
H: eastern equine encephalomyelitis eee (aka eastern equine encephalitis virus)
I: venezuelan equine encephalitis virus (veev (aka venezuelan equine encephalitis virus))
J: equine abortion virus (aka equid alphaherpesvirus 1)
K: sars-cov (urbani strain) (aka sars coronavirus urbani)
L: veia
M: house mouse (aka mus musculus)
N: vebetovirus
O: western european house mouse (aka mus musculus domesticus)
P: None of the above. | [I; M; E] |
<Instruct>: Given the context 'We then compared the efficacies of vaccines bearing attenuated (VRP(3014)) or wild-type VEE glycoproteins (VRP(3000)) in young and aged mice within novel models of severe SARS-CoV pathogenesis.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [vee; mice; sars-cov]
<Options>: A: eastern equine encephalitis virus (eastern equine encephalomyelitis virus eeev) (aka eastern equine encephalitis virus)
B: veia
C: mouse (aka mus musculus)
D: venezuelan equine encephalitis vee (aka venezuelan equine encephalitis virus)
E: erve virus
F: bat sars-related coronavirus (aka bat sars-like coronavirus)
G: mus macedonicus (macedonian mouse) (aka mus macedonicus)
H: bovine enterovirus (aka enterovirus e)
I: sars-like coronavirus (aka severe acute respiratory syndrome-related coronavirus)
J: sars coronavirus as
K: western wild mouse (aka mus spretus)
L: sars-cov (urbani strain) (aka sars coronavirus urbani)
M: mus famulus (servant mouse) (aka mus famulus)
N: severe acute respiratory syndrome coronavirus (sars coronavirus) (aka severe acute respiratory syndrome coronavirus)
O: mouse (aka mus <genus>)
P: None of the above. | [D; C; I] |
<Instruct>: Given the context 'We then compared the efficacies of vaccines bearing attenuated (VRP(3014)) or wild-type VEE glycoproteins (VRP(3000)) in young and aged mice within novel models of severe SARS-CoV pathogenesis.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [vee; mice; sars-cov]
<Options>: A: erve virus
B: mus musculus (house mouse) (aka mus musculus)
C: equine abortion virus (aka equid alphaherpesvirus 1)
D: bat sars coronavirus (aka sars bat coronavirus)
E: sarsr-cov (aka severe acute respiratory syndrome-related coronavirus)
F: eastern european house mouse (aka mus musculus musculus)
G: eastern equine encephalomyelitis virus eeev (aka eastern equine encephalitis virus)
H: recombinant sars coronavirus
I: bovine enterovirus (aka enterovirus e)
J: mus macedonicus (macedonian mouse) (aka mus macedonicus)
K: mice (aka mus sp.) (aka mus sp.)
L: sars-cov (urbani strain) (aka sars coronavirus urbani)
M: mice (aka mus <genus>) (aka mus <genus>)
N: veev (aka venezuelan equine encephalitis virus) (aka venezuelan equine encephalitis virus)
O: sars-2 (aka severe acute respiratory syndrome coronavirus 2)
P: None of the above. | [N; B; E] |
<Instruct>: Given the context 'Aged animals receiving VRP(3000)-based vaccines were protected from SARS-CoV disease, while animals receiving the VRP(3014)-based vaccines were not.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [sars-cov]
<Options>: A: recombinant sars coronavirus
B: sars bat coronavirus (bat sars coronavirus) (aka sars bat coronavirus)
C: sars coronavirus as
D: sars-cov (urbani strain) (aka sars coronavirus urbani)
E: sarsr-cov (aka severe acute respiratory syndrome-related coronavirus)
F: None of the above. | [E] |
<Instruct>: Given the context 'Exploration into the mechanism(s) of successful vaccination in the immunosenescent should aid in the development of successful vaccine strategies for other viral diseases disproportionately affecting the elderly, like West Nile virus, influenza virus, norovirus, or other emerging viruses of the future.
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [west nile virus]
<Options>: A: denalis virus
B: west nile virus strain pt5.2
C: northway virus
D: swine influenza virus
E: west nile virus (wnv (aka west nile virus))
F: None of the above. | [E] |
<Instruct>: Given the context 'Neutralizing antibody-resistant hepatitis C virus cell-to-cell transmission.
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [hepatitis c virus]
<Options>: A: human hepatitis c virus hcv (aka hepacivirus hominis)
B: hepatitis c-like viruses (aka hepacivirus)
C: hepatitis a virus (aka hepatovirus a)
D: hepatitis b virus type c (aka hepatitis b virus genotype c)
E: hhav (aka human hepatitis a virus) (aka human hepatitis a virus)
F: None of the above. | [A] |
<Instruct>: Given the context 'Hepatitis C virus (HCV) can initiate infection by cell-free particle and cell-cell contact-dependent transmission.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [hcv]
<Options>: A: hcv (aka hepacivirus hominis) (aka hepacivirus hominis)
B: hepatitis c virus hcv-kf (hepatitis c virus (isolate hcv-kf)) (aka hepatitis c virus hcv-kf)
C: hepatitis c virus (isolate japanese)
D: hepatitis c viruses (aka hepacivirus)
E: human hepatitis b virus (aka hepatitis b virus)
F: None of the above. | [A] |
<Instruct>: Given the context 'Cell-to-cell transmission is relatively resistant to anti-HCV glycoprotein monoclonal antibodies and polyclonal immunoglobulin isolated from infected individuals, providing an effective strategy for escaping host humoral immune responses.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [anti-hcv]
<Options>: A: hepatitis c virus 08.80.014
B: human hepatitis c virus hcv (aka hepacivirus hominis)
C: antichaacvirus
D: hepatitis c virus 08.40.072
E: recombinant hcv viruses
F: None of the above. | [B] |
<Instruct>: Given the context 'Chimeric viruses expressing the structural proteins representing the seven major HCV genotypes demonstrate neutralizing antibody-resistant cell-to-cell transmission.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [hcv]
<Options>: A: hepatovirus c
B: human hepatitis b virus (aka hepatitis b virus)
C: human hepatitis circovirus
D: human hepatitis c virus hcv (aka hepacivirus hominis)
E: hcv-hun (aka hepatitis c virus (isolate hunan))
F: None of the above. | [D] |
<Instruct>: Given the context 'Chimeric viruses expressing the structural proteins representing the seven major HCV genotypes demonstrate neutralizing antibody-resistant cell-to-cell transmission.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [hcv]
<Options>: A: hcv-hun (aka hepatitis c virus (isolate hunan))
B: human hepatitis b virus (aka hepatitis b virus)
C: hepatovirus c
D: human hepatitis circovirus
E: None of the above. | [E] |
<Instruct>: Given the context 'HCV entry is a multistep process involving numerous receptors.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [hcv]
<Options>: A: hepatitis c virus subtype 6v
B: hepatitis c-like viruses (aka hepacivirus)
C: human hepatitis c virus hcv (aka hepacivirus hominis)
D: human hepatitis a virus (hhav (aka human hepatitis a virus))
E: hepatitis c virus (isolate 1)
F: None of the above. | [C] |
<Instruct>: Given the context 'Reovirus infection or ectopic expression of outer capsid protein micro1 induces apoptosis independently of the cellular proapoptotic proteins Bax and Bak.
Mammalian orthoreoviruses induce apoptosis in vivo and in vitro; however, the specific mechanism by which apoptosis is induced is not fully understood.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [mammalian orthoreoviruses]
<Options>: A: orthoavulavirus
B: mammalian orthoreovirus
C: mammalian orthoreovirus 3 (reovirus type 3) (aka mammalian orthoreovirus 3)
D: mammalian enterovirus
E: orthomyxoviridae
F: None of the above. | [B] |
<Instruct>: Given the context 'Additionally, mu1- or reovirus-induced release of cytochrome c occurred efficiently in Bax(-/-)Bak(-/-) mouse embryonic fibroblasts (MEFs).', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [mouse]
<Options>: A: mus musculus castaneus (southeastern asian house mouse) (aka mus musculus castaneus)
B: mice (aka mus <genus>) (aka mus <genus>)
C: mouse (aka mus musculus)
D: mus terricolor (earth-colored mouse) (aka mus terricolor)
E: mus domesticus (aka mus musculus domesticus)
F: None of the above. | [C] |
<Instruct>: Given the context 'Chikungunya virus induces IPS-1-dependent innate immune activation and protein kinase R-independent translational shutoff.
Chikungunya virus (CHIKV) is an arthritogenic mosquito-transmitted alphavirus that is undergoing reemergence in areas around the Indian Ocean.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [chikungunya virus; chikv]
<Options>: A: culex japonicus (aka aedes japonicus)
B: chize virus
C: chiba virus
D: crimean-congo hemorrhagic fever orthonairovirus (aka orthonairovirus haemorrhagiae)
E: chikungunya virus
F: chivirus chi (salmonella virus chi) (aka chivirus chi)
G: crimean-congo hemorrhagic virus (aka orthonairovirus haemorrhagiae)
H: chiqui virus
I: king virus
J: None of the above. | [E; E] |
<Instruct>: Given the context 'Chikungunya virus induces IPS-1-dependent innate immune activation and protein kinase R-independent translational shutoff.
Chikungunya virus (CHIKV) is an arthritogenic mosquito-transmitted alphavirus that is undergoing reemergence in areas around the Indian Ocean.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [chikungunya virus; chikv]
<Options>: A: chikungunya virus
B: swine influenza virus
C: chivirus chi (salmonella virus chi) (aka chivirus chi)
D: dengue virus
E: chiba virus
F: chikungunya virus strain nagpur
G: hunchun nairovirus
H: None of the above. | [A; A] |
<Instruct>: Given the context 'Despite the current and potential danger posed by this virus, we know surprisingly little about the induction and evasion of CHIKV-associated antiviral immune responses.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [chikv]
<Options>: A: oya virus
B: chilibre virus
C: chikungunya virus
D: chibugado virus
E: chikungunya virus strain nagpur
F: None of the above. | [C] |
<Instruct>: Given the context 'With this in mind we investigated innate immune reactions to CHIKV in human fibroblasts, a demonstrable in vivo target of virus replication and spread.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [chikv; human]
<Options>: A: chikungunya virus
B: homo sapiens (human) (aka homo sapiens)
C: gymnopleurus humanus
D: carcharhinus humani
E: karelian fever virus
F: humans (aka homo)
G: canya virus
H: chilibre virus
I: chize virus
J: human body louse (aka pediculus humanus corporis)
K: None of the above. | [A; B] |
<Instruct>: Given the context 'With this in mind we investigated innate immune reactions to CHIKV in human fibroblasts, a demonstrable in vivo target of virus replication and spread.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [chikv; human]
<Options>: A: chilibre virus
B: carcharhinus humani
C: human body louse (aka pediculus humanus corporis)
D: gymnopleurus humanus
E: canya virus
F: chize virus
G: humans (aka homo)
H: karelian fever virus
I: chikungunya virus
J: None of the above. | [I; J] |
<Instruct>: Given the context 'With this in mind we investigated innate immune reactions to CHIKV in human fibroblasts, a demonstrable in vivo target of virus replication and spread.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [chikv; human]
<Options>: A: sphaeria humana (aka sordaria humana)
B: karelian fever virus
C: chikungunya virus
D: cardium humanum (aka glossus humanus)
E: canya virus
F: chijiahe virus
G: pediculus humanus (human louse) (aka pediculus humanus)
H: macrobiotus sapiens
I: crimean-congo hemorrhagic virus (aka orthonairovirus haemorrhagiae)
J: human (aka homo sapiens)
K: None of the above. | [C; J] |
<Instruct>: Given the context 'We show that CHIKV infection leads to activation of the transcription factor interferon regulatory factor 3 (IRF3) and subsequent transcription of IRF3-dependent antiviral genes, including beta interferon (IFN-Beta).', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [chikv]
<Options>: A: karelian fever virus
B: chize virus
C: chijiahe virus
D: oya virus
E: chikungunya virus
F: None of the above. | [E] |
<Instruct>: Given the context 'We further demonstrate that translation of cellular (but not viral) genes is blocked during infection and that although CHIKV is found to trigger inactivation of the translational molecule eukaryotic initiation factor subunit 2alpha by way of the double-stranded RNA sensor protein kinase R, this response is not required for the block to protein synthesis.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [chikv]
<Options>: A: oya virus
B: chiba virus
C: hunchun nairovirus
D: chikungunya virus
E: king virus
F: None of the above. | [D] |
<Instruct>: Given the context 'Furthermore, overall diminution of cellular RNA synthesis is also observed in the presence of CHIKV and transcription of IRF3-dependent antiviral genes appears specifically blocked late in infection.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [chikv]
<Options>: A: chize virus
B: hunchun nairovirus
C: chilibre virus
D: chikungunya virus
E: oya virus
F: None of the above. | [D] |
<Instruct>: Given the context 'We hypothesize that the observed absence of IFN-Beta and antiviral proteins during infection results from an evasion mechanism exhibited by CHIKV that is dependent on widespread shutoff of cellular protein synthesis and a targeted block to late synthesis of antiviral mRNA transcripts.
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [chikv]
<Options>: A: chikungunya virus strain nagpur
B: culex japonicus (aka aedes japonicus)
C: chikungunya virus
D: canya virus
E: king virus
F: None of the above. | [C] |
<Instruct>: Given the context 'Dominant inhibition of Akt/protein kinase B signaling by the matrix protein of a negative-strand RNA virus.
Vesicular stomatitis virus (VSV) is a rhabdovirus that alters host nuclear and cytoplasmic function upon infection.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [vesicular stomatitis virus; vsv]
<Options>: A: vsnjv (aka vesicular stomatitis new jersey virus)
B: swine vesicular exanthema virus (aka vesicular exanthema of swine virus)
C: swine vesicular disease virus (strain ukg/27/72)
D: sunguru virus
E: vesicular stomatitis virus (serotype new jersey / strain missouri)
F: swine vesicular disease virus
G: vesicular stomatitis indiana virus (strain 98coe north america)
H: swinepox virus
I: vesicular stomatitis virus (vesicular stomatitis virus, vsv) (aka vesicular stomatitis virus)
J: None of the above. | [I; I] |
<Instruct>: Given the context 'Dominant inhibition of Akt/protein kinase B signaling by the matrix protein of a negative-strand RNA virus.
Vesicular stomatitis virus (VSV) is a rhabdovirus that alters host nuclear and cytoplasmic function upon infection.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [vesicular stomatitis virus; vsv]
<Options>: A: vesicular stomatitis indiana virus strain glasgow (vesicular stomatitis virus (serotype indiana / strain glasgow)) (aka vesicular stomatitis indiana virus strain glasgow)
B: swine vesicular disease virus (strain ukg/27/72)
C: vesicular stomatitis virus (serotype new jersey / strain missouri)
D: vesicular stomatitis indiana virus (strain 94gub central america)
E: vesicular stomatitis virus vsv (aka vesicular stomatitis virus)
F: vesicular stomatitis indiana virus (strain 98coe north america)
G: vesicular stomatitis indiana virus (vsiv (aka vesicular stomatitis indiana virus))
H: vsav (aka vesicular stomatitis alagoas virus) (aka vesicular stomatitis alagoas virus)
I: None of the above. | [E; E] |
<Instruct>: Given the context 'Dominant inhibition of Akt/protein kinase B signaling by the matrix protein of a negative-strand RNA virus.
Vesicular stomatitis virus (VSV) is a rhabdovirus that alters host nuclear and cytoplasmic function upon infection.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [vesicular stomatitis virus; vsv]
<Options>: A: vesicular stomatitis indiana virus (strain 94gub central america)
B: swine vesicular disease virus (strain ukg/27/72)
C: vesicular stomatitis virus (serotype new jersey / strain missouri)
D: vesicular stomatitis indiana virus strain glasgow (vesicular stomatitis virus (serotype indiana / strain glasgow)) (aka vesicular stomatitis indiana virus strain glasgow)
E: vsav (aka vesicular stomatitis alagoas virus) (aka vesicular stomatitis alagoas virus)
F: vesicular stomatitis indiana virus (strain 98coe north america)
G: vesicular stomatitis indiana virus (vsiv (aka vesicular stomatitis indiana virus))
H: None of the above. | [H; H] |
<Instruct>: Given the context 'We have investigated the effect of VSV infection on cellular signaling through the phosphatidylinositol-3 kinase (PI3k)/Akt signaling pathway.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [vsv]
<Options>: A: swine vesicular disease virus
B: sorv (aka south river virus) (aka south river virus)
C: vesicular stomatitis virus, vsv (aka vesicular stomatitis virus)
D: vesicular stomatitis indiana virus (strain 94gub central america)
E: swinepox virus
F: None of the above. | [C] |
<Instruct>: Given the context 'Akt phosphorylation at both threonine 308 (Thr308) and serine 473 (Ser473) was inhibited in cells infected with VSV.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [vsv]
<Options>: A: swine vesicular disease virus
B: avisivirus
C: vesicular stomatitis virus (vesicular stomatitis virus, vsv) (aka vesicular stomatitis virus)
D: vsav (aka vesicular stomatitis alagoas virus) (aka vesicular stomatitis alagoas virus)
E: sunguru virus
F: None of the above. | [C] |
<Instruct>: Given the context 'These data illustrate that VSV utilizes a novel mechanism to alter this central player in cell signaling and oncogenesis.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [vsv]
<Options>: A: swine vesicular disease virus (strain h/3 '76)
B: vesicular stomatitis alagoas virus (vsav (aka vesicular stomatitis alagoas virus))
C: south river virus (sorv (aka south river virus))
D: avisivirus
E: vesicular stomatitis virus, vsv (aka vesicular stomatitis virus)
F: None of the above. | [E] |
<Instruct>: Given the context 'It also suggests an inside-out model of signal transduction where VSV interruption of nuclear events has a rapid and significant effect on membrane signaling events.
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [vsv]
<Options>: A: vesicular stomatitis virus, vsv (aka vesicular stomatitis virus)
B: sorv (aka south river virus) (aka south river virus)
C: swine vesicular exanthema virus (aka vesicular exanthema of swine virus)
D: swine vesicular disease virus (strain h/3 '76)
E: swine vesicular disease virus
F: None of the above. | [A] |
<Instruct>: Given the context 'Serine-threonine ubiquitination mediates downregulation of BST-2/tetherin and relief of restricted virion release by HIV-1 Vpu.
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [hiv-1]
<Options>: A: human immunodeficiency virus type 1, hiv-1 (aka human immunodeficiency virus 1)
B: human immunodeficiency virus (hiv (aka human immunodeficiency virus))
C: human immunodeficiency virus type 1 (kb-1 isolate)
D: None of the above. | [A] |
<Instruct>: Given the context 'The HIV-1 protein Vpu counteracts the antiviral activity of the innate restriction factor BST-2/tetherin by a mechanism that partly depends on its interaction with Beta-TrCP, a substrate adaptor for an SCF (Skp-Cullin 1-F box) E3 ubiquitin ligase complex.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [hiv-1]
<Options>: A: human immunodeficiency virus hiv-1 (aka human immunodeficiency virus 1)
B: hiv (aka human immunodeficiency virus) (aka human immunodeficiency virus)
C: human immunodeficiency virus type 1 (kb-1 isolate)
D: None of the above. | [A] |
<Instruct>: Given the context 'Varicella-zoster virus glycoprotein E is a critical determinant of virulence in the SCID mouse-human model of neuropathogenesis.
Varicella-zoster virus (VZV) is a neurotropic alphaherpesvirus.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [varicella-zoster virus; human; vzv]
<Options>: A: varicella zoster virus (aka human alphaherpesvirus 3)
B: cardium humanum (aka glossus humanus)
C: varicella-zoster virus (strain dumas) (aka human herpesvirus 3 strain dumas)
D: smallpox virus (aka variola virus)
E: human herpesvirus 3 vzv-32
F: simian varicella virus (aka cercopithecine alphaherpesvirus 9)
G: human body louse (aka pediculus humanus corporis)
H: homo sapiens (human) (aka homo sapiens)
I: horsepox virus
J: gymnopleurus humanus
K: variola
L: herpesvirus pan (aka panine gammaherpesvirus 1)
M: macrobiotus sapiens
N: None of the above. | [A; H; A] |
<Instruct>: Given the context 'Varicella-zoster virus glycoprotein E is a critical determinant of virulence in the SCID mouse-human model of neuropathogenesis.
Varicella-zoster virus (VZV) is a neurotropic alphaherpesvirus.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [varicella-zoster virus; human; vzv]
<Options>: A: rabbitpox virus
B: cardium humanum (aka glossus humanus)
C: swinepox virus
D: simian varicella virus (aka cercopithecine alphaherpesvirus 9)
E: pediculus humanus (human louse) (aka pediculus humanus)
F: smallpox (aka variola virus)
G: human herpesvirus 3 strain dumas (varicella-zoster virus (strain dumas)) (aka human herpesvirus 3 strain dumas)
H: great apes (aka hominidae)
I: vixey virus
J: gymnopleurus humanus
K: human alphaherpesvirus 3 (vzv (aka human alphaherpesvirus 3))
L: zebra herpesvirus
M: quailpox virus
N: homo sapiens (human) (aka homo sapiens)
O: None of the above. | [K; N; K] |
<Instruct>: Given the context 'Varicella-zoster virus glycoprotein E is a critical determinant of virulence in the SCID mouse-human model of neuropathogenesis.
Varicella-zoster virus (VZV) is a neurotropic alphaherpesvirus.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [varicella-zoster virus; human; vzv]
<Options>: A: varicella zoster virus vzv (aka human alphaherpesvirus 3)
B: homo sapiens (human) (aka homo sapiens)
C: smallpox virus (aka variola virus)
D: variola
E: human louse (aka pediculus humanus)
F: glossus humanus (cardium humanum) (aka glossus humanus)
G: simian varicella virus (aka cercopithecine alphaherpesvirus 9)
H: herpesvirus pan (aka panine gammaherpesvirus 1)
I: hominidae (great apes) (aka hominidae)
J: quailpox virus
K: human herpesvirus 3 vzv-32
L: swinepox virus
M: vaccinia virus (vaccinia virus vv) (aka vaccinia virus)
N: humans (aka homo)
O: None of the above. | [A; B; A] |
<Instruct>: Given the context 'VZV infection of human dorsal root ganglion (DRG) xenografts in immunodeficient mice models the infection of sensory ganglia.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [vzv; human]
<Options>: A: human herpesvirus 3 strain dumas (varicella-zoster virus (strain dumas)) (aka human herpesvirus 3 strain dumas)
B: zebra herpesvirus
C: smallpox (aka variola virus)
D: glossus humanus (cardium humanum) (aka glossus humanus)
E: gymnopleurus humanus
F: human louse (aka pediculus humanus)
G: varicella-zoster virus (aka human alphaherpesvirus 3)
H: homo sapiens (human) (aka homo sapiens)
I: varicellaria
J: pediculus humanus corporis (pediculus humanus humanus) (aka pediculus humanus corporis)
K: None of the above. | [G; H] |
<Instruct>: Given the context 'VZV infection of human dorsal root ganglion (DRG) xenografts in immunodeficient mice models the infection of sensory ganglia.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [vzv; human]
<Options>: A: zebra herpesvirus
B: gymnopleurus humanus
C: macrobiotus sapiens
D: varicella-zoster virus vzv (aka human alphaherpesvirus 3)
E: human louse (aka pediculus humanus)
F: neanderthal man (aka homo sapiens neanderthalensis)
G: variola
H: human herpesvirus 3 vzv-32
I: homo sapiens (human) (aka homo sapiens)
J: gallid herpesvirus
K: None of the above. | [D; I] |
<Instruct>: Given the context 'We examined DRG infection with recombinant VZV (recombinant Oka [rOka]) and the following gE mutants: gEDelta27-90, gEDeltaCys, gE-AYRV, and gE-SSTT.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [vzv]
<Options>: A: human orf virus
B: herpesvirus pan (aka panine gammaherpesvirus 1)
C: zebra herpesvirus
D: varicella zoster virus (aka human alphaherpesvirus 3)
E: gallid herpesvirus
F: None of the above. | [D] |
<Instruct>: Given the context 'We examined DRG infection with recombinant VZV (recombinant Oka [rOka]) and the following gE mutants: gEDelta27-90, gEDeltaCys, gE-AYRV, and gE-SSTT.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [vzv]
<Options>: A: human orf virus
B: gallid herpesvirus
C: zebra herpesvirus
D: herpesvirus pan (aka panine gammaherpesvirus 1)
E: None of the above. | [E] |
<Instruct>: Given the context 'Since neural cells express IDE, the gE/IDE interaction was dispensable for VZV neurotropism.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [vzv]
<Options>: A: variola
B: smallpox virus (aka variola virus)
C: human herpesvirus 3 strain dumas (varicella-zoster virus (strain dumas)) (aka human herpesvirus 3 strain dumas)
D: gallid herpesvirus
E: simian varicella virus (aka cercopithecine alphaherpesvirus 9)
F: None of the above. | [F] |
<Instruct>: Given the context 'These experiments suggest that the gE interaction with cellular IDE, gE targeting to TGN sites of virion envelopment, and phosphorylation at SSTT are dispensable for VZV DRG infection, whereas the gE/gI interaction is critical for VZV neurovirulence.
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [vzv]
<Options>: A: varicella-zoster virus (strain dumas) (aka human herpesvirus 3 strain dumas)
B: smallpox virus (aka variola virus)
C: zebra herpesvirus
D: simian varicella virus (aka cercopithecine alphaherpesvirus 9)
E: herpesvirus pan (aka panine gammaherpesvirus 1)
F: None of the above. | [F] |
<Instruct>: Given the context 'Domain structure of Lassa virus L protein.
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [lassa virus]
<Options>: A: swinepox virus
B: las maloyas virus
C: lassa virus (strain ga391) (aka lassa virus ga391)
D: lassa virus (aka mammarenavirus lassaense)
E: lasigmu virus
F: None of the above. | [D] |
<Instruct>: Given the context 'This study aimed at providing evidence for the domain structure of L protein by combining bioinformatics with a stepwise mutagenesis approach using the Lassa virus minireplicon system.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [lassa virus]
<Options>: A: swine influenza virus
B: las maloyas virus
C: swine orthopneumovirus
D: louping ill virus (li (aka louping ill virus))
E: lassa virus (aka mammarenavirus lassaense)
F: None of the above. | [E] |
<Instruct>: Given the context 'Insertion of 5 or 10 amino acid residues was tolerated at seven sites (S407, G446, G467, G774, G939, S1952, and V2074 in Lassa virus AV).', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [lassa virus av]
<Options>: A: langya virus (langya henipavirus) (aka langya virus)
B: las maloyas virus
C: swine orthopneumovirus
D: dairy swamp virus
E: lassa virus (aka mammarenavirus lassaense)
F: None of the above. | [E] |
<Instruct>: Given the context 'In conclusion, this study demonstrates two interdomain linkers in Lassa virus L protein, at G467 and G939, suggesting that L protein is composed of at least three structural domains spanning residues 1 to 467, 467 to 939, and 939 to 2220.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [lassa virus]
<Options>: A: swine influenza virus
B: louping ill virus (li (aka louping ill virus))
C: lassa virus ga391 (lassa virus (strain ga391)) (aka lassa virus ga391)
D: swine vesicular disease virus
E: lassa virus (aka mammarenavirus lassaense)
F: None of the above. | [E] |
<Instruct>: Given the context 'Small-molecule inhibition of human immunodeficiency virus type 1 infection by virus capsid destabilization.
Human immunodeficiency virus type 1 (HIV-1) infection is dependent on the proper disassembly of the viral capsid, or "uncoating," in target cells.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [human immunodeficiency virus type 1; hiv-1]
<Options>: A: human immunodeficiency virus type 1 hiv-1 (aka human immunodeficiency virus 1)
B: human immunodeficiency virus type 1 (new york-5 isolate)
C: human immunodeficiency virus type 1 (kb-1 isolate)
D: hiv (aka human immunodeficiency virus) (aka human immunodeficiency virus)
E: None of the above. | [A; A] |
<Instruct>: Given the context 'Small-molecule inhibition of human immunodeficiency virus type 1 infection by virus capsid destabilization.
Human immunodeficiency virus type 1 (HIV-1) infection is dependent on the proper disassembly of the viral capsid, or "uncoating," in target cells.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [human immunodeficiency virus type 1; hiv-1]
<Options>: A: human immunodeficiency virus type 1 (new york-5 isolate)
B: hiv (aka human immunodeficiency virus 1) (aka human immunodeficiency virus 1)
C: human immunodeficiency virus type 1 (kb-1 isolate)
D: human immunodeficiency virus (hiv (aka human immunodeficiency virus))
E: hiv (aka human immunodeficiency virus) (aka human immunodeficiency virus)
F: None of the above. | [B; B] |
<Instruct>: Given the context 'Small-molecule inhibition of human immunodeficiency virus type 1 infection by virus capsid destabilization.
Human immunodeficiency virus type 1 (HIV-1) infection is dependent on the proper disassembly of the viral capsid, or "uncoating," in target cells.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [human immunodeficiency virus type 1; hiv-1]
<Options>: A: human immunodeficiency virus type 1 (new york-5 isolate)
B: human immunodeficiency virus (hiv (aka human immunodeficiency virus))
C: hiv (aka human immunodeficiency virus) (aka human immunodeficiency virus)
D: human immunodeficiency virus type 1 (kb-1 isolate)
E: None of the above. | [E; E] |
<Instruct>: Given the context 'The HIV-1 capsid consists of a conical multimeric complex of the viral capsid protein (CA) arranged in a hexagonal lattice.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [hiv-1]
<Options>: A: aids virus (aka human immunodeficiency virus 1)
B: human immunodeficiency virus type 1 (kb-1 isolate)
C: aids virus (aka human immunodeficiency virus)
D: None of the above. | [A] |
<Instruct>: Given the context 'We describe here the mechanism of action of a small molecule HIV-1 inhibitor, PF-3450074 (PF74), which targets CA.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [hiv-1]
<Options>: A: aids virus (aka human immunodeficiency virus)
B: human immunodeficiency virus 1 (human immunodeficiency virus type 1, hiv-1) (aka human immunodeficiency virus 1)
C: human immunodeficiency virus type 1 (kb-1 isolate)
D: None of the above. | [B] |
<Instruct>: Given the context 'PF74 acts at an early stage of HIV-1 infection and inhibits reverse transcription in target cells.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [hiv-1]
<Options>: A: human immunodeficiency virus type 1 (kb-1 isolate)
B: hiv (aka human immunodeficiency virus) (aka human immunodeficiency virus)
C: human immunodeficiency virus hiv-1 (aka human immunodeficiency virus 1)
D: None of the above. | [C] |
<Instruct>: Given the context 'We show that PF74 binds specifically to HIV-1 particles, and substitutions in CA that confer resistance to the compound prevent binding.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [hiv-1]
<Options>: A: human immunodeficiency virus (hiv (aka human immunodeficiency virus))
B: human immunodeficiency virus-1 hiv-1 (aka human immunodeficiency virus 1)
C: human immunodeficiency virus type 1 (kb-1 isolate)
D: None of the above. | [B] |
<Instruct>: Given the context 'A single point mutation in CA that stabilizes the HIV-1 core also conferred strong resistance to the virus without inhibiting compound binding.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [hiv-1]
<Options>: A: human immunodeficiency virus 1 hiv-1 (aka human immunodeficiency virus 1)
B: hiv (aka human immunodeficiency virus) (aka human immunodeficiency virus)
C: human immunodeficiency virus type 1 (kb-1 isolate)
D: None of the above. | [A] |
<Instruct>: Given the context 'Treatment of HIV-1 particles or purified cores with PF74 destabilized the viral capsid in vitro.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [hiv-1]
<Options>: A: aids virus (aka human immunodeficiency virus)
B: human immunodeficiency virus type 1 (kb-1 isolate)
C: hiv-1 (aka human immunodeficiency virus 1)
D: None of the above. | [C] |
<Instruct>: Given the context 'Furthermore, the compound induced the rapid dissolution of the HIV-1 capsid in target cells.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [hiv-1]
<Options>: A: hiv1 (aka human immunodeficiency virus 1) (aka human immunodeficiency virus 1)
B: human immunodeficiency virus type 1 (kb-1 isolate)
C: hiv (aka human immunodeficiency virus) (aka human immunodeficiency virus)
D: None of the above. | [A] |
<Instruct>: Given the context 'PF74 antiviral activity was promoted by binding of the host protein cyclophilin A to the HIV-1 capsid, and PF74 and cyclosporine exhibited mutual antagonism.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [hiv-1]
<Options>: A: human immunodeficiency virus (hiv (aka human immunodeficiency virus))
B: human immunodeficiency virus type 1 (kb-1 isolate)
C: hiv1 (aka human immunodeficiency virus 1) (aka human immunodeficiency virus 1)
D: None of the above. | [C] |
<Instruct>: Given the context 'Our data suggest that PF74 triggers premature HIV-1 uncoating in target cells, thereby mimicking the activity of the retrovirus restriction factor TRIM5alpha.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [hiv-1]
<Options>: A: human immunodeficiency virus type 1 (kb-1 isolate)
B: aids virus (aka human immunodeficiency virus 1)
C: human immunodeficiency virus (hiv (aka human immunodeficiency virus))
D: None of the above. | [B] |
<Instruct>: Given the context 'This study highlights uncoating as a step in the HIV-1 life cycle that is susceptible to small molecule intervention.
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [hiv-1]
<Options>: A: human immunodeficiency virus-1 hiv-1 (aka human immunodeficiency virus 1)
B: human immunodeficiency virus type 1 (kb-1 isolate)
C: aids virus (aka human immunodeficiency virus)
D: None of the above. | [A] |
<Instruct>: Given the context 'This study highlights uncoating as a step in the HIV-1 life cycle that is susceptible to small molecule intervention.
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [hiv-1]
<Options>: A: human immunodeficiency virus type 1 (kb-1 isolate)
B: aids virus (aka human immunodeficiency virus)
C: None of the above. | [C] |
<Instruct>: Given the context 'Mice lacking both B7.1 and B7.2 showed reduced early expansion of CMV-specific CD4 T cells, consequently allowing for enhanced levels of persistent virus replication.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [mice]
<Options>: A: mus musculus (house mouse) (aka mus musculus)
B: mus terricolor (earth-colored mouse) (aka mus terricolor)
C: southeastern asian house mouse (aka mus musculus castaneus)
D: western wild mouse (aka mus spretus)
E: mus <genus> (mice (aka mus <genus>))
F: None of the above. | [A] |
<Instruct>: Given the context 'Novel F141L pre-S2 mutation in hepatitis B virus increases the risk of hepatocellular carcinoma in patients with chronic genotype C infections.
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [hepatitis b virus]
<Options>: A: hepatitis b virus (subtype ayw) (aka hepatitis b virus subtype ayw)
B: human hepatitis a virus (hhav (aka human hepatitis a virus))
C: duck hepatitis b virus (dhbv (aka duck hepatitis b virus))
D: heron hepatitis b virus (hhbv (aka heron hepatitis b virus))
E: human hepatitis b virus (aka hepatitis b virus)
F: None of the above. | [E] |
<Instruct>: Given the context 'Several lines of evidence have suggested that some naturally occurring mutations of hepatitis B virus (HBV) play a critical role in hepatocellular carcinoma (HCC).', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [hepatitis b virus; hbv]
<Options>: A: hepatitis gb virus b (aka gb virus-b)
B: hepatovirus b
C: human hepatitis b virus hbv (aka hepatitis b virus)
D: hepatitis b-type viruses (aka hepadnaviridae)
E: hbv genotype b (aka hepatitis b virus genotype b)
F: gb virus-b (hepatitis gb virus b) (aka gb virus-b)
G: dhbv (aka duck hepatitis b virus) (aka duck hepatitis b virus)
H: non-human hbv
I: None of the above. | [C; C] |
<Instruct>: Given the context 'Several lines of evidence have suggested that some naturally occurring mutations of hepatitis B virus (HBV) play a critical role in hepatocellular carcinoma (HCC).', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [hepatitis b virus; hbv]
<Options>: A: hbv-i (aka hepatitis b virus genotype i)
B: hepatitis b virus (subtype ayw) (aka hepatitis b virus subtype ayw)
C: hepatitis b virus genotype b (hbv genotype b) (aka hepatitis b virus genotype b)
D: human hepatitis b virus (aka hepatitis b virus)
E: non-human hbv
F: human hepatitis a virus (hhav (aka human hepatitis a virus))
G: heron hepatitis b virus (hhbv (aka heron hepatitis b virus))
H: hepatovirus b
I: hepatitis a virus (aka hepatovirus a)
J: None of the above. | [D; D] |
<Instruct>: Given the context 'Poliovirus-mediated disruption of cytoplasmic processing bodies.
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [poliovirus]
<Options>: A: murine poliovirus (aka theiler's encephalomyelitis virus)
B: poliovirus 2 (human poliovirus type 2) (aka poliovirus 2)
C: p virus
D: poliovirus type 1 (aka poliovirus 1)
E: poliovirus (aka enterovirus c)
F: None of the above. | [E] |
<Instruct>: Given the context 'Poliovirus (PV) is a plus-strand RNA virus containing a genome that is a functional mRNA; thus, we investigated if PV antagonizes the processes that lead to formation of these structures.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [poliovirus; pv]
<Options>: A: p virus
B: transformation vector pv1
C: transfection vector pvv
D: poliovirus (aka enterovirus c)
E: human poliovirus type 2 (aka poliovirus 2)
F: pestivirus o
G: pestivirus c (aka pestivirus suis)
H: unidentified poliovirus
I: malaria parasite p. vivax (aka plasmodium vivax)
J: human poliovirus type 3 (aka poliovirus 3)
K: None of the above. | [D; D] |
<Instruct>: Given the context 'Poliovirus (PV) is a plus-strand RNA virus containing a genome that is a functional mRNA; thus, we investigated if PV antagonizes the processes that lead to formation of these structures.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [poliovirus; pv]
<Options>: A: pestivirus p
B: pestivirus o
C: poliovirus type 2 (aka poliovirus 2)
D: pestivirus d (aka pestivirus ovis)
E: poliovirus (aka enterovirus c)
F: murine poliovirus (aka theiler's encephalomyelitis virus)
G: perrin park virus
H: p virus
I: transfection vector pvv
J: polio virus 3 (aka poliovirus 3)
K: None of the above. | [E; E] |
<Instruct>: Given the context 'We have previously shown that PV infection inhibits the ability of cells to form stress granules by cleaving RasGAP-SH3-binding protein (G3BP).', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [pv]
<Options>: A: transformation vector pv1
B: porcine pestivirus
C: pestivirus o
D: pestivirus f (aka pestivirus australiaense)
E: penalva
F: None of the above. | [F] |
<Instruct>: Given the context 'Here, we show that P bodies are also disrupted during PV infection in cells by 4 h postinfection.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [pv]
<Options>: A: transfection vector pvv
B: pv1 (aka poliovirus 1) (aka poliovirus 1)
C: transformation vector pv1
D: pestivirus p
E: malaria parasite p. vivax (aka plasmodium vivax)
F: None of the above. | [F] |
<Instruct>: Given the context 'Two factors involved in 5'-end mRNA decapping and degradation, Xrn1 and Dcp1a, and the 3' deadenylase complex component Pan3 underwent accelerated degradation during infection, and Dcp1a may be a direct substrate of PV 3C proteinase.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [pv]
<Options>: A: veprecula
B: pestivirus c (aka pestivirus suis)
C: pestivirus
D: pv1 (aka poliovirus 1) (aka poliovirus 1)
E: pestivirus p
F: None of the above. | [F] |
<Instruct>: Given the context 'Several other key factors proposed to be essential for P body formation, GW182, Edc3, and Edc4, were unaffected by poliovirus infection.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [poliovirus]
<Options>: A: human poliovirus 2 (aka poliovirus 2)
B: poliovirus (aka enterovirus c)
C: unidentified poliovirus
D: murine poliovirus (aka theiler's encephalomyelitis virus)
E: human poliovirus 3 (aka poliovirus 3)
F: None of the above. | [B] |
<Instruct>: Given the context 'The magnitude of local immunity in the lungs of mice induced by live attenuated influenza vaccines is determined by local viral replication and induction of cytokines.
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [mice]
<Options>: A: mus molossinus (aka mus musculus molossinus)
B: mus terricolor (earth-colored mouse) (aka mus terricolor)
C: eastern european house mouse (aka mus musculus musculus)
D: mouse (aka mus musculus)
E: mus californicus (aka peromyscus californicus)
F: None of the above. | [D] |
<Instruct>: Given the context 'While live attenuated influenza vaccines (LAIVs) have been shown to be efficacious and have been licensed for human use, the surface glycoproteins hemagglutinin (HA) and neuraminidase (NA) have to be updated for optimal protective efficacy.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [human]
<Options>: A: cardium humanum (aka glossus humanus)
B: human louse (aka pediculus humanus)
C: human (aka homo sapiens)
D: sphaeria humana (aka sordaria humana)
E: humans (aka homo)
F: None of the above. | [C] |
<Instruct>: Given the context 'A panel of LAIVs that share the internal protein genes, with unique HA and NA gene segments from different influenza subtypes, was rescued by reverse genetics, and a comparative study of immune responses induced by these vaccines was conducted in mice.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [mice]
<Options>: A: western european house mouse (aka mus musculus domesticus)
B: mouse (aka mus musculus)
C: mus molossinus (aka mus musculus molossinus)
D: mice (aka mus sp.) (aka mus sp.)
E: mus famulus (servant mouse) (aka mus famulus)
F: None of the above. | [B] |
<Instruct>: Given the context 'A qualitative analysis of immune responses induced by a single dose of an H5N1 LAIV revealed that the vaccine induced robust systemic and mucosal immunity in mice.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [h5n1; mice]
<Options>: A: house mouse (aka mus musculus)
B: equine influenza virus
C: southeastern asian house mouse (aka mus musculus castaneus)
D: swine influenza virus
E: fluav (aka influenza a virus)
F: avian influenza virus (aka unidentified influenza virus)
G: gammainfluenzavirus influenzae
H: mus californicus (aka peromyscus californicus)
I: mice (aka mus sp.) (aka mus sp.)
J: mus <genus> (mice (aka mus <genus>))
K: None of the above. | [E; A] |
<Instruct>: Given the context 'A qualitative analysis of immune responses induced by a single dose of an H5N1 LAIV revealed that the vaccine induced robust systemic and mucosal immunity in mice.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [h5n1; mice]
<Options>: A: house mouse (aka mus musculus)
B: mus californicus (aka peromyscus californicus)
C: mice (aka mus sp.) (aka mus sp.)
D: mus <genus> (mice (aka mus <genus>))
E: avian influenza virus (aka unidentified influenza virus)
F: gammainfluenzavirus influenzae
G: equine influenza virus
H: swine influenza virus
I: southeastern asian house mouse (aka mus musculus castaneus)
J: None of the above. | [J; A] |
<Instruct>: Given the context 'A qualitative analysis of immune responses induced by a single dose of an H5N1 LAIV revealed that the vaccine induced robust systemic and mucosal immunity in mice.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [h5n1; mice]
<Options>: A: mus macedonicus (macedonian mouse) (aka mus macedonicus)
B: gammainfluenzavirus influenzae
C: mice (aka mus sp.) (aka mus sp.)
D: alphainfluenzavirus (influenzavirus a) (aka alphainfluenzavirus)
E: eastern european house mouse (aka mus musculus musculus)
F: southeastern asian house mouse (aka mus musculus castaneus)
G: influenza virus type a (aka influenza a virus)
H: duck influenza virus
I: unidentified influenza virus (avian influenza virus) (aka unidentified influenza virus)
J: house mouse (aka mus musculus)
K: None of the above. | [G; J] |
<Instruct>: Given the context 'In addition, antibodies and memory lymphocytes established in the lungs following vaccination were required for protection against lethal challenge with homologous and heterologous H5N1 viruses.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [h5n1 viruses]
<Options>: A: influenza virus (aka unidentified influenza virus)
B: human influenza a virus (aka influenza a virus)
C: influenzavirus d (aka deltainfluenzavirus)
D: swine influenza virus
E: influenza c virus (influenza virus type c) (aka influenza c virus)
F: None of the above. | [B] |
<Instruct>: Given the context 'Transgenic expression of the RNA-dependent RNA polymerase 3D(pol) inhibited infection of Theiler's murine encephalitis virus (TMEV), a picornavirus from which it was derived.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [theiler's murine encephalitis virus; tmev]
<Options>: A: theiler's murine encephalomyelitis virus (strain da) (aka theiler's encephalomyelitis virus (strain da))
B: fsme virus (aka tick-borne encephalitis virus)
C: turkish sheep encephalitis virus (tsev (aka turkish sheep encephalitis virus))
D: theiler's murine encephalomyeltits virus gdvii (theiler's murine encephalomyelitis virus (strain gdvii)) (aka theiler's murine encephalomyeltits virus gdvii)
E: theiler's murine encephalomyeltits virus (aka cardiovirus b1)
F: theiler's disease-associated virus (tdav (aka theiler's disease-associated virus))
G: turkey meningoencephalitis virus
H: tmuv (aka tembusu virus) (aka tembusu virus)
I: vee (aka venezuelan equine encephalitis virus) (aka venezuelan equine encephalitis virus)
J: murray valley encephalitis virus
K: None of the above. | [K; K] |
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