instruction stringlengths 209 946 | input stringlengths 96 1.45k | response stringlengths 3 12 |
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<Instruct>: Given the context 'Phylogenetic analysis based on LSU rDNA showed that the sequence of G. myriopyrenoides was included in the Gymnodiniales sensu stricto clade and had special affinities with the species Amphidinium poecilochroum and Gymnodinium acidotum, which also harbor kleptochloroplasts.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [g. myriopyrenoides; amphidinium poecilochroum; gymnodinium acidotum]
<Options>: A: amphidinium poecilochroum (aka nusuttodinium poecilochroum)
B: magnaporthales
C: gymnodinium myriopyrenoides (aka nusuttodinium myriopyrenoides)
D: gymnostomum lanceolatum
E: anthidium poecilodontum (aka afranthidium poecilodontum)
F: nusuttodinium acidotum (gymnodinium acidotum) (aka nusuttodinium acidotum)
G: gymnodinium simplex (aka protodinium simplex)
H: amphiallagma parvum (enallagma parvum) (aka amphiallagma parvum)
I: gymnodinium plasticum
J: megaselia lucigaster (aka myriophora lucigaster)
K: amphidinium crassum
L: waltergamsia parva (acremonium parvum) (aka waltergamsia parva)
M: glycomycetales (glycomycineae) (aka glycomycetales)
N: pyroglyphidae (house-dust mites) (aka pyroglyphidae)
O: gymnocalycium erinaceum
P: None of the above. | [C; A; F] |
<Instruct>: Given the context 'Phylogenetic analysis based on plastid-encoded SSU rDNA and ultrastructural observations suggested that the symbionts of G. myriopyrenoides were cryptophytes of the genus Chroomonas or Hemiselmis.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [g. myriopyrenoides]
<Options>: A: graphidoideae
B: magnaporthales
C: gymnodinium myriopyrenoides (aka nusuttodinium myriopyrenoides)
D: glomales (aka glomerales)
E: trogoderma anthrenoides
F: None of the above. | [C] |
<Instruct>: Given the context 'Phylogenetic analysis based on plastid-encoded SSU rDNA and ultrastructural observations suggested that the symbionts of G. myriopyrenoides were cryptophytes of the genus Chroomonas or Hemiselmis.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [g. myriopyrenoides]
<Options>: A: magnaporthales
B: glomales (aka glomerales)
C: graphidoideae
D: trogoderma anthrenoides
E: None of the above. | [E] |
<Instruct>: Given the context 'The symbiotic level of G. myriopyrenoides was estimated to be a relatively early stage in the unarmored kleptoplastidal dinoflagellates.
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [g. myriopyrenoides]
<Options>: A: magnaporthales
B: globigerinoides
C: geometer moths (aka geometridae)
D: gigaspermales
E: gymnodinium myriopyrenoides (aka nusuttodinium myriopyrenoides)
F: None of the above. | [E] |
<Instruct>: Given the context 'Identification and characterization of genes responsible for biosynthesis of kojic acid, an industrially important compound from Aspergillus oryzae.
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [aspergillus oryzae]
<Options>: A: aspergillus flavus var. oryzae (aka aspergillus oryzae)
B: pestalotiopsis oryzae
C: 'amorphomonas oryzae' (aka amorphomonas oryzae)
D: magnaporthe oryzae (aka pyricularia oryzae)
E: aspergillus fumigatus fresen., 1863 (aka aspergillus fumigatus)
F: None of the above. | [A] |
<Instruct>: Given the context 'Kojic acid is produced in large amounts by Aspergillus oryzae as a secondary metabolite and is widely used in the cosmetic industry.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [aspergillus oryzae]
<Options>: A: pestalotiopsis oryzae
B: eurotium oryzae (aka aspergillus oryzae)
C: amorphomonas oryzae ('amorphomonas oryzae') (aka amorphomonas oryzae)
D: magnaporthe oryzae (aka pyricularia oryzae)
E: pleospora oryzae (aka phaeosphaeria oryzae)
F: None of the above. | [B] |
<Instruct>: Given the context 'In children, respiratory syncytial virus, rhinovirus, human metapneumovirus, human bocavirus, and parainfluenza viruses are the agents identified most frequently in both developed and developing countries.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [respiratory syncytial virus; human metapneumovirus; human bocavirus]
<Options>: A: respiratory syncytial virus (respiratory syncytial virus rs virus) (aka respiratory syncytial virus)
B: human rsv (aka human respiratory syncytial virus)
C: bocaparvovirus (bocavirus) (aka bocaparvovirus)
D: avian pneumovirus (aka avian metapneumovirus)
E: feline bocavirus
F: human respiratory syncytial virus a (respiratory syncytial virus group a) (aka human respiratory syncytial virus a)
G: bovine respiratory syncytial virus
H: human parainfluenza virus (aka human respirovirus 1)
I: bocovirus
J: avian metapneumovirus subtype b (aka avian metapneumovirus type b)
K: respiratory syncytial virus group b (aka human respiratory syncytial virus b)
L: human bocavirus 2a
M: human parainfluenza virus (aka human orthorubulavirus 2)
N: human bocavirus
O: human metapneumovirus (hmpv (aka human metapneumovirus))
P: None of the above. | [A; O; N] |
<Instruct>: Given the context 'In children, respiratory syncytial virus, rhinovirus, human metapneumovirus, human bocavirus, and parainfluenza viruses are the agents identified most frequently in both developed and developing countries.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [respiratory syncytial virus; human metapneumovirus; human bocavirus]
<Options>: A: metapneumovirus avis
B: orsv (aka ovine respiratory syncytial virus) (aka ovine respiratory syncytial virus)
C: respiratory syncytial virus type a (respiratory syncytial virus subsp. subgroup a) (aka respiratory syncytial virus type a)
D: human orthopneumovirus (aka human respiratory syncytial virus)
E: bocovirus
F: porcine bocavirus
G: human bocavirus
H: human parainfluenza virus (aka human respirovirus 3)
I: human parainfluenza virus (aka human respirovirus 1)
J: rsv (aka respiratory syncytial virus) (aka respiratory syncytial virus)
K: human bocaparvovirus
L: human bocavirus 4
M: human respiratory syncytial virus a (respiratory syncytial virus group a) (aka human respiratory syncytial virus a)
N: human metapneumovirus (hmpv (aka human metapneumovirus))
O: avian metapneumovirus type a
P: None of the above. | [J; N; G] |
<Instruct>: Given the context 'In children, respiratory syncytial virus, rhinovirus, human metapneumovirus, human bocavirus, and parainfluenza viruses are the agents identified most frequently in both developed and developing countries.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [respiratory syncytial virus; human metapneumovirus; human bocavirus]
<Options>: A: rsv (aka respiratory syncytial virus) (aka respiratory syncytial virus)
B: human respiratory syncytial virus b (respiratory syncytial virus group b) (aka human respiratory syncytial virus b)
C: respiratory syncytial virus type a (respiratory syncytial virus subsp. subgroup a) (aka respiratory syncytial virus type a)
D: metapneumovirus
E: respiratory syncytial virus group a (aka human respiratory syncytial virus a)
F: human parainfluenza virus (aka human orthorubulavirus 4)
G: human metapneumovirus b
H: avian metapneumovirus type a
I: orsv (aka ovine respiratory syncytial virus) (aka ovine respiratory syncytial virus)
J: fox bocavirus
K: human bocavirus
L: hmpv (aka human metapneumovirus) (aka human metapneumovirus)
M: bocovirus
N: rodent bocavirus
O: porcine bocavirus
P: None of the above. | [A; L; K] |
<Instruct>: Given the context 'Unexpected coregulator range for the global regulator Lrp of Escherichia coli and Proteus mirabilis.
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [escherichia coli; proteus mirabilis]
<Options>: A: pseudomonas mutabilis
B: escherichia coli c
C: 'escherichia faecalis' (aka escherichia faecalis)
D: escherichia coli 99.1793
E: common proteus (aka proteus anguinus)
F: prohamitermes mirabilis
G: proteus mirabilis
H: kribbella mirabilis
I: escherichia/shigella coli (aka escherichia coli)
J: escherichia coli 99.1762
K: None of the above. | [I; G] |
<Instruct>: Given the context 'Unexpected coregulator range for the global regulator Lrp of Escherichia coli and Proteus mirabilis.
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [escherichia coli; proteus mirabilis]
<Options>: A: escherichia coli c
B: porina mirabilis
C: entamoeba coli
D: kribbella mirabilis
E: proteus columbae
F: enterobacter aerogenes (aka klebsiella aerogenes)
G: proteus mirabilis
H: escherichia coli nissle 1917 (escherichia coli strain nissle 1917) (aka escherichia coli nissle 1917)
I: bacterium coli commune (aka escherichia coli)
J: pleuropasta mirabilis
K: None of the above. | [I; G] |
<Instruct>: Given the context 'In Escherichia coli, Lrp regulates over 200 genes directly and is well known to respond to leucine and, to a somewhat lesser extent, alanine.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [escherichia coli]
<Options>: A: escherichia faecalis ('escherichia faecalis') (aka escherichia faecalis)
B: escherichia coli 9.1796
C: escherichia/shigella coli (aka escherichia coli)
D: escherichia coli c
E: escherichia
F: None of the above. | [C] |
<Instruct>: Given the context 'We focused on Lrp from Proteus mirabilis and E. coli, orthologs with 98% identity overall and identical helix-turn-helix motifs, for which a previous study nevertheless found functional differences.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [proteus mirabilis; e. coli]
<Options>: A: porina mirabilis
B: proteus vulgaris
C: escherichia
D: proteus mirabilis 1014
E: escherichia coli nissle 1917 (escherichia coli strain nissle 1917) (aka escherichia coli nissle 1917)
F: kribbella mirabilis
G: entamoeba coli
H: escherichia coli 99.1762
I: enterococcus coli (aka escherichia coli)
J: proteus mirabilis
K: None of the above. | [J; I] |
<Instruct>: Given the context 'We focused on Lrp from Proteus mirabilis and E. coli, orthologs with 98% identity overall and identical helix-turn-helix motifs, for which a previous study nevertheless found functional differences.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [proteus mirabilis; e. coli]
<Options>: A: e. coli (aka escherichia coli)
B: amoeba proteus
C: vibrio coli (aka campylobacter coli)
D: escherichia coli b (escherichia coli (strain b)) (aka escherichia coli b)
E: proteus mirabilis
F: enterobacter aerogenes (aka klebsiella aerogenes)
G: pseudomonas mutabilis
H: escherichia coli 9.1796
I: proteus alimentorum
J: proteus columbae
K: None of the above. | [E; A] |
<Instruct>: Given the context 'In the course of this investigation, we found, via in vivo reporter fusion assays and in vitro electrophoretic mobility shift experiments, that E. coli Lrp itself responded to a broader range of amino acids than was previously appreciated.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [e. coli]
<Options>: A: escherichia coli nissle 1917 (escherichia coli strain nissle 1917) (aka escherichia coli nissle 1917)
B: escherichia coli 9.1796
C: escherichia freundii (aka citrobacter freundii)
D: enterococcus coli (aka escherichia coli)
E: 'escherichia faecalis' (aka escherichia faecalis)
F: None of the above. | [D] |
<Instruct>: Given the context 'In particular, for both the E. coli and P. mirabilis orthologs, Lrp responsiveness to methionine was similar in magnitude to that to leucine.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [e. coli; p. mirabilis]
<Options>: A: phaea mirabilis
B: 'escherichia faecalis' (aka escherichia faecalis)
C: stypella mirabilis
D: bacillus coli (aka escherichia coli)
E: pleuropasta mirabilis
F: proteus mirabilis
G: escherichia coli c
H: kudoa mirabilis
I: e. coli w (aka escherichia coli w)
J: escherichia
K: None of the above. | [D; F] |
<Instruct>: Given the context 'In particular, for both the E. coli and P. mirabilis orthologs, Lrp responsiveness to methionine was similar in magnitude to that to leucine.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [e. coli; p. mirabilis]
<Options>: A: e. coli w (aka escherichia coli w)
B: triplotaenia mirabilis
C: proteus mirabilis
D: entamoeba coli
E: escherichia
F: pseudomonas mutabilis
G: porina mirabilis
H: pyura mirabilis
I: escherichia/shigella coli (aka escherichia coli)
J: escherichia coli nissle 1917 (escherichia coli strain nissle 1917) (aka escherichia coli nissle 1917)
K: None of the above. | [I; C] |
<Instruct>: Given the context '2. We investigated the covariation among naturally colonising above- and belowground invertebrate species across six genetically distinct populations of the dune grass Ammophila arenaria.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [ammophila arenaria]
<Options>: A: monomorium arenarium
B: amanita arenaria (torrendia arenaria) (aka amanita arenaria)
C: ammophila arenaria (aka calamagrostis arenaria)
D: amphisbaena arenaria
E: artemisia arenaria
F: None of the above. | [C] |
<Instruct>: Given the context 'The observed strong covariation suggests diffuse coevolution between A. arenaria and its associated invertebrate species.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [a. arenaria]
<Options>: A: roella arenaria
B: crotalaria arenaria
C: ammophila arenaria (aka calamagrostis arenaria)
D: veronica arenaria
E: amphisbaena arenaria
F: None of the above. | [C] |
<Instruct>: Given the context 'Labeling and enzyme studies of the central carbon metabolism in Metallosphaera sedula.
Metallosphaera sedula (Sulfolobales, Crenarchaeota) uses the 3-hydroxypropionate/4-hydroxybutyrate cycle for autotrophic carbon fixation.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [metallosphaera sedula]
<Options>: A: paramoritella sediminis
B: mariniradius sediminis
C: mangrovitalea sediminis
D: agrion sedula (aka argia sedula)
E: metallosphaera sedula
F: None of the above. | [E] |
<Instruct>: Given the context 'Resources were distributed across discrete habitat patches in bruchid beetle (Callosobruchus maculatus) metapopulations, and long-term time series were recorded.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [callosobruchus maculatus]
<Options>: A: cnidoscolus maculatus (jatropha maculata) (aka cnidoscolus maculatus)
B: carpophilus maculatus
C: chius maculatus
D: callopistes maculatus
E: callosobruchus maculatus (bruchus maculatus) (aka callosobruchus maculatus)
F: None of the above. | [E] |
<Instruct>: Given the context 'Resources were distributed across discrete habitat patches in bruchid beetle (Callosobruchus maculatus) metapopulations, and long-term time series were recorded.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [callosobruchus maculatus]
<Options>: A: cnidoscolus maculatus (jatropha maculata) (aka cnidoscolus maculatus)
B: callopistes maculatus
C: carpophilus maculatus
D: chius maculatus
E: None of the above. | [E] |
<Instruct>: Given the context 'The sensor kinase CbrA is a global regulator that modulates metabolism, virulence, and antibiotic resistance in Pseudomonas aeruginosa.
Pseudomonas aeruginosa is an opportunistic pathogen that possesses a large arsenal of virulence factors enabling the pathogen to cause serious infections in immunocompromised patients, burn victims, and cystic fibrosis patients.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [pseudomonas aeruginosa]
<Options>: A: pasteurella pestis (aka yersinia pestis)
B: pseudomonas aeruginosa c
C: pseudomonas pyocyanea (aka pseudomonas aeruginosa)
D: pseudomonas paralactis
E: pseudomonas wisconsinensis ('pseudomonas wisconsinensis') (aka pseudomonas wisconsinensis)
F: None of the above. | [C] |
<Instruct>: Given the context 'CbrA is a sensor kinase that has previously been implied to play a role with its cognate response regulator CbrB in the metabolic regulation of carbon and nitrogen utilization in P. aeruginosa.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [p. aeruginosa]
<Options>: A: pseudomonas aeruginosa pa1
B: pseudomonas nosocomialis (aka stutzerimonas nosocomialis)
C: pseudomonas aeruginosa c
D: pseudomonas aeruginosa (schroeter 1872) migula 1900 (approved lists 1980) (aka pseudomonas aeruginosa)
E: pasteurella aerogenes (aka [pasteurella] aerogenes)
F: None of the above. | [D] |
<Instruct>: Given the context 'The cbrA deletion mutant was completely unable to swarm while exhibiting an increase in biofilm formation, supporting the inverse regulation of swarming and biofilm formation in P. aeruginosa.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [p. aeruginosa]
<Options>: A: pseudomonas aeruginosa c
B: bacterium pyocyaneum (aka pseudomonas aeruginosa)
C: pseudomonas aeruginosa pa1
D: pseudomonas nosocomialis (aka stutzerimonas nosocomialis)
E: pasteurella
F: None of the above. | [B] |
<Instruct>: Given the context 'The cbrA mutant also exhibited increased cytotoxicity to human lung epithelial cells as early as 4 and 6 h postinfection.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [human]
<Options>: A: homo (humans) (aka homo)
B: gymnopleurus humanus
C: neandertal man (aka homo sapiens neanderthalensis)
D: great apes (aka hominidae)
E: homo sapiens (human) (aka homo sapiens)
F: None of the above. | [E] |
<Instruct>: Given the context 'Rapid environmental changes and pressing human needs to forecast the consequences of environmental change are increasingly driving ecology to become a predictive science.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [human]
<Options>: A: carcharhinus humani
B: human (aka homo sapiens)
C: pediculus humanus (human louse) (aka pediculus humanus)
D: humans (aka homo)
E: human body louse (aka pediculus humanus corporis)
F: None of the above. | [B] |
<Instruct>: Given the context 'Alcohol dehydrogenase and hydrogenase transcript fluctuations during a day-night cycle in Chlamydomonas reinhardtii: the role of anoxia.
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [chlamydomonas reinhardtii]
<Options>: A: chlamydomonas chlamydogama
B: chlamydomonas reticulata (aka chloromonas reticulata)
C: chlamydomonas tubulosa (aka gloeomonas tubulosa)
D: chlamydomonas reinhardtii (chlamydomonas smithii) (aka chlamydomonas reinhardtii)
E: chlamydomonas klinobasis
F: None of the above. | [D] |
<Instruct>: Given the context 'The unicellular green alga Chlamydomonas reinhardtii contains two iron (Fe)-hydrogenases which are responsible for hydrogen production under anoxia.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [chlamydomonas reinhardtii]
<Options>: A: chlamydomonas smithii (aka chlamydomonas reinhardtii)
B: chlamydomonas zebra (chlamydomonas texensis) (aka chlamydomonas zebra)
C: chlamydomonas typica
D: chlamydomonas marvanii
E: chlamydomonas
F: None of the above. | [A] |
<Instruct>: Given the context 'In order to understand the spatial distribution of JA biosynthetic capacity in nodules of two actinorhizal species, Casaurina glauca and Datisca glomerata, and one legume, Medicago truncatula, we determined the localization of allene oxide cyclase (AOC) which catalyses a committed step in JA biosynthesis.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [casaurina glauca; datisca glomerata; medicago truncatula]
<Options>: A: polygala glomerata
B: acidosasa glauca
C: medicago marina
D: eudendrium glomeratum
E: medicago hypogaea
F: medicago polymorpha
G: otatea glauca
H: casuarina glauca (swamp oak) (aka casuarina glauca)
I: barrel medic (aka medicago truncatula)
J: datisca glomerata
K: lycaena glauca (aka lepidochrysops glauca)
L: calceolaria glauca
M: alfalfa (aka medicago sativa)
N: faerlea glomerata
O: glomera plumosa
P: None of the above. | [H; J; I] |
<Instruct>: Given the context 'In order to understand the spatial distribution of JA biosynthetic capacity in nodules of two actinorhizal species, Casaurina glauca and Datisca glomerata, and one legume, Medicago truncatula, we determined the localization of allene oxide cyclase (AOC) which catalyses a committed step in JA biosynthesis.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [casaurina glauca; datisca glomerata; medicago truncatula]
<Options>: A: polygala glomerata
B: datisca glomerata
C: medicago hypogaea
D: glomera plumosa
E: medicago marina
F: otatea glauca
G: lycaena glauca (aka lepidochrysops glauca)
H: acidosasa glauca
I: medicago polymorpha
J: eudendrium glomeratum
K: alfalfa (aka medicago sativa)
L: faerlea glomerata
M: casuarina glauca (swamp oak) (aka casuarina glauca)
N: calceolaria glauca
O: None of the above. | [M; B; O] |
<Instruct>: Given the context 'In order to understand the spatial distribution of JA biosynthetic capacity in nodules of two actinorhizal species, Casaurina glauca and Datisca glomerata, and one legume, Medicago truncatula, we determined the localization of allene oxide cyclase (AOC) which catalyses a committed step in JA biosynthesis.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [casaurina glauca; datisca glomerata; medicago truncatula]
<Options>: A: chnoophora glauca (aka sphaeropteris glauca)
B: barrel medic (aka medicago truncatula)
C: faerlea glomerata
D: medicago saxatilis
E: crassula glomerata
F: polyalthia glauca (aka maasia glauca)
G: casuarina glauca (swamp oak) (aka casuarina glauca)
H: medicago rotata
I: medicago hypogaea
J: adenia glauca
K: datisca glomerata
L: sida glomerata
M: polygala glomerata
N: cyathea glauca
O: medicago plicata
P: None of the above. | [G; K; B] |
<Instruct>: Given the context 'In order to understand the spatial distribution of JA biosynthetic capacity in nodules of two actinorhizal species, Casaurina glauca and Datisca glomerata, and one legume, Medicago truncatula, we determined the localization of allene oxide cyclase (AOC) which catalyses a committed step in JA biosynthesis.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [casaurina glauca; datisca glomerata; medicago truncatula]
<Options>: A: medicago truncatula var. truncatula
B: madia glomerata
C: medicago doliata
D: calceolaria glauca
E: glomera compressa
F: nolana glauca
G: callitris glauca
H: medicago turbinata
I: cardamine glauca
J: datisca glomerata
K: casuarina glauca (swamp oak) (aka casuarina glauca)
L: cryptantha glomerata
M: alvordia glomerata
N: medicago tuberculata
O: medicago truncatula (barrel medic) (aka medicago truncatula)
P: None of the above. | [K; J; O] |
<Instruct>: Given the context 'The nodules and noninoculated roots of the two actinorhizal species, and the root systems of M. truncatula, noninoculated or nodulated with wild-type Sinorhizobium meliloti or with mutants unable to fix nitrogen, did not show significant differences in JA levels.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [m. truncatula; sinorhizobium meliloti]
<Options>: A: mesorhizobium loti (rhizobium loti) (aka mesorhizobium loti)
B: medicago constricta
C: monteverdia truncata (maytenus truncata) (aka monteverdia truncata)
D: sinorhizobium meliloti (dangeard 1926) de lajudie et al. 1994 (aka sinorhizobium meliloti)
E: sinorhizobium meliloti m10
F: phytomyxa leguminosarum (aka rhizobium leguminosarum)
G: medicago truncatula (barrel medic) (aka medicago truncatula)
H: medetera truncorum
I: medicago tuberculata
J: sinorhizobium meliloti kh35b
K: None of the above. | [G; D] |
<Instruct>: Given the context 'The nodules and noninoculated roots of the two actinorhizal species, and the root systems of M. truncatula, noninoculated or nodulated with wild-type Sinorhizobium meliloti or with mutants unable to fix nitrogen, did not show significant differences in JA levels.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [m. truncatula; sinorhizobium meliloti]
<Options>: A: sinorhizobium arboris (sinorhizobium arboris nick et al. 1999) (aka sinorhizobium arboris)
B: sinorhizobium meliloti kh16b
C: medicago constricta
D: barrel medic (aka medicago truncatula)
E: montipora truncata
F: sinorhizobium meliloti kh30a
G: medicago truncatula var. truncatula
H: sinorhizobium meliloti kh35c
I: monteverdia truncata (maytenus truncata) (aka monteverdia truncata)
J: ensifer meliloti (aka sinorhizobium meliloti)
K: None of the above. | [D; J] |
<Instruct>: Given the context 'The nodules and noninoculated roots of the two actinorhizal species, and the root systems of M. truncatula, noninoculated or nodulated with wild-type Sinorhizobium meliloti or with mutants unable to fix nitrogen, did not show significant differences in JA levels.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [m. truncatula; sinorhizobium meliloti]
<Options>: A: sinorhizobium meliloti kh35c
B: sinorhizobium arboris (sinorhizobium arboris nick et al. 1999) (aka sinorhizobium arboris)
C: barrel medic (aka medicago truncatula)
D: sinorhizobium meliloti kh30a
E: montipora truncata
F: monteverdia truncata (maytenus truncata) (aka monteverdia truncata)
G: medicago constricta
H: sinorhizobium meliloti kh16b
I: medicago truncatula var. truncatula
J: None of the above. | [C; J] |
<Instruct>: Given the context 'To study whether JA played a regulatory role in the nodules of M. truncatula, composite plants containing roots expressing an MtAOC1-sense or MtAOC1-RNAi construct were inoculated with S. meliloti.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [m. truncatula; s. meliloti]
<Options>: A: medicago turbinata
B: sinorhizobium meliloti m10
C: montipora truncata
D: sinorhizobium meliloti (dangeard 1926) de lajudie et al. 1994 (aka sinorhizobium meliloti)
E: gallotia galloti galloti (lacerta galloti galloti) (aka gallotia galloti galloti)
F: truncilla truncata
G: sinorhizobium meliloti kh35c
H: sinorhizobium meliloti kh35b
I: medetera truncorum
J: medicago truncatula (barrel medic) (aka medicago truncatula)
K: None of the above. | [J; D] |
<Instruct>: Given the context 'To study whether JA played a regulatory role in the nodules of M. truncatula, composite plants containing roots expressing an MtAOC1-sense or MtAOC1-RNAi construct were inoculated with S. meliloti.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [m. truncatula; s. meliloti]
<Options>: A: medicago truncatula (barrel medic) (aka medicago truncatula)
B: plenodomus meliloti
C: medicago turbinata
D: majeorona truncata
E: sinorhizobium meliloti kh35c
F: ashmeadiella meliloti
G: sinorhizobium meliloti usda 1002
H: truncilla truncata
I: medicago tuberculata
J: sinorhizobium meliloti (sinorhizobium meliloti (dangeard 1926) de lajudie et al. 1994) (aka sinorhizobium meliloti)
K: None of the above. | [A; J] |
<Instruct>: Given the context 'The degree of mycoheterotrophic carbon gain in green, variegated and vegetative albino individuals of Cephalanthera damasonium is related to leaf chlorophyll concentrations.
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [cephalanthera damasonium]
<Options>: A: cephalanthera damasonium (serapias damasonium) (aka cephalanthera damasonium)
B: epidendrum calanthum
C: cephaloleia bella
D: campanula damascena
E: avena damascena
F: None of the above. | [A] |
<Instruct>: Given the context 'The discovery of two Cephalanthera damasonium populations with variegated leaves enabled a continuous bridging of leaf chlorophyll concentrations between green and albino forms.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [cephalanthera damasonium]
<Options>: A: serapias damasonium (aka cephalanthera damasonium)
B: dicranum caesium
C: dichanthelium chamaelonche (panicum chamaelonche) (aka dichanthelium chamaelonche)
D: cerastium cephalanthum
E: erica desmantha
F: None of the above. | [A] |
<Instruct>: Given the context 'Leaves of 27 green, variegated and albino individuals of C. damasonium were compared for chlorophyll concentrations, C sources (as characterized by (13)C abundances) and total C and nitrogen (N) concentrations.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [c. damasonium]
<Options>: A: chamaebryum
B: serapias damasonium (aka cephalanthera damasonium)
C: dicranum lanigerum (aka chorisodontium lanigerum)
D: chamaeranthemum
E: corticium caesiocinereum (aka basidiodendron caesiocinereum)
F: None of the above. | [B] |
<Instruct>: Given the context 'Our results document that partial mycoheterotrophy in C. damasonium is not a static nutritional mode but a flexible mechanism related inter alia to leaf chlorophyll concentrations.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [c. damasonium]
<Options>: A: cephalanthera damasonium (serapias damasonium) (aka cephalanthera damasonium)
B: dichanthium
C: dicranum caesium
D: chamaeranthemum
E: corticium caesiocinereum (aka basidiodendron caesiocinereum)
F: None of the above. | [A] |
<Instruct>: Given the context 'Importantly, we identified EF-1alpha genes from two members of Filosa (Paracercomonas marina and Paulinella chromatophora) and a member of the other subphylum Endomyxa (Filoreta japonica).', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [paracercomonas marina; paulinella chromatophora; filoreta japonica]
<Options>: A: filoreta japonica
B: papiliotrema aurea (chromotorula aurea f.c. harrison, 1928) (aka papiliotrema aurea)
C: paracercomonas marina
D: callianassa japonica (aka neotrypaea japonica)
E: cladosporium porophorum
F: conioscypha japonica
G: parthenium hysterophorus
H: calopteryx japonica
I: rhizophila marina
J: paulinella chromatophora
K: prosthecochloris marina
L: persephonella marina
M: psychromonas marina
N: litoleptis japonica
O: corynophlaea cystophorae
P: None of the above. | [C; J; A] |
<Instruct>: Given the context 'Importantly, we identified EF-1alpha genes from two members of Filosa (Paracercomonas marina and Paulinella chromatophora) and a member of the other subphylum Endomyxa (Filoreta japonica).', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [paracercomonas marina; paulinella chromatophora; filoreta japonica]
<Options>: A: paulinella chromatophora
B: goera japonica
C: psychromonas marina
D: leptochela japonica
E: phytomyza nigra (chromatomyia nigra) (aka phytomyza nigra)
F: ptilophora aureolusa
G: pseudokahliella marina
H: paracoccus marinaquae
I: papiliotrema aurea (chromotorula aurea f.c. harrison, 1928) (aka papiliotrema aurea)
J: litoleptis japonica
K: filoreta japonica
L: pseudoalteromonas marina
M: fannia spathiophora
N: paracercomonas marina
O: goniada japonica
P: None of the above. | [N; A; K] |
<Instruct>: Given the context 'Importantly, we identified EF-1alpha genes from two members of Filosa (Paracercomonas marina and Paulinella chromatophora) and a member of the other subphylum Endomyxa (Filoreta japonica).', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [paracercomonas marina; paulinella chromatophora; filoreta japonica]
<Options>: A: leptochela japonica
B: callianassa japonica (aka neotrypaea japonica)
C: pseudoalteromonas marina
D: paracercomonas marina
E: clorida japonica
F: corynophlaea cystophorae
G: paulinella chromatophora
H: callicarpa japonica
I: filoreta japonica
J: protea aurea
K: pseudomonas luteola (chryseomonas polytricha) (aka pseudomonas luteola)
L: acropolitis ergophora
M: psychromonas marina
N: pseudokahliella marina
O: paraglaciecola marina
P: None of the above. | [D; G; I] |
<Instruct>: Given the context 'A genomic map enriched for markers linked to Avr1 in Cronartium quercuum f.sp. fusiforme.
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [cronartium quercuum f.sp. fusiforme]
<Options>: A: cronartium quercuum f. sp. echinatae
B: cronartium murrayanae
C: cronartium quercuum
D: cronartium fusiforme
E: cronartium quercuum f. sp. banksianae
F: None of the above. | [C] |
<Instruct>: Given the context 'A novel approach is presented to map avirulence gene Avr1 in the basidiomycete Cronartium quercuum f.sp. fusiforme, the causal agent of fusiform rust disease in pines.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [cronartium quercuum f.sp. fusiforme]
<Options>: A: cronartium occidentale
B: cronartium quercuum
C: cronartium arizonicum
D: cronartium quercuum f. sp. fusiforme g11
E: cronartium quercuum f. sp. banksianae
F: None of the above. | [B] |
<Instruct>: Given the context 'DNA markers tightly linked to resistance gene Fr1 in loblolly pine tree 10-5 were used to classify 10-5 seedling progeny as either resistant or susceptible.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [loblolly pine]
<Options>: A: limber pine (aka pinus flexilis)
B: pinus echinata (shortleaf pine) (aka pinus echinata)
C: longleaf pine (aka pinus palustris)
D: eastern white pine (aka pinus strobus)
E: pinus taeda (loblolly pine) (aka pinus taeda)
F: None of the above. | [E] |
<Instruct>: Given the context 'DNA markers tightly linked to resistance gene Fr1 in loblolly pine tree 10-5 were used to classify 10-5 seedling progeny as either resistant or susceptible.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [loblolly pine]
<Options>: A: longleaf pine (aka pinus palustris)
B: eastern white pine (aka pinus strobus)
C: limber pine (aka pinus flexilis)
D: pinus echinata (shortleaf pine) (aka pinus echinata)
E: None of the above. | [E] |
<Instruct>: Given the context 'Analysis of the Fusarium graminearum species complex from wheat, barley and maize in South Africa provides evidence of species-specific differences in host preference.
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [fusarium graminearum species complex; wheat; barley; maize]
<Options>: A: fusarium culmorum (fusisporium culmorum) (aka fusarium culmorum)
B: barley (aka hordeum vulgare)
C: triticum
D: maize (aka zea mays)
E: wild barley (aka hordeum vulgare subsp. spontaneum)
F: seaside barley (aka hordeum marinum)
G: fusisporium cerealis (aka fusarium cerealis)
H: fusarium zeae (fusisporium zeae) (aka fusarium zeae)
I: corn smut (aka mycosarcoma maydis)
J: corn ear worm (aka helicoverpa armigera)
K: triticum peregrinum (aka aegilops peregrina)
L: wild emmer wheat (aka triticum dicoccoides)
M: fusarium graminearum (gibberella zeae (schwein.) petch, 1936) (aka fusarium graminearum)
N: zelus grassans
O: domesticated barley (aka hordeum vulgare subsp. vulgare)
P: wheat (aka triticum aestivum)
Q: maize weevil (aka sitophilus zeamais)
R: triticum triunciale (aka aegilops triuncialis)
S: fusarium praegraminearum
T: None of the above. | [M; P; B; D] |
<Instruct>: Given the context 'Analysis of the Fusarium graminearum species complex from wheat, barley and maize in South Africa provides evidence of species-specific differences in host preference.
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [fusarium graminearum species complex; wheat; barley; maize]
<Options>: A: avenula agropyroides (aka helictochloa agropyroides)
B: triticum vulgare (aka triticum aestivum)
C: gibberella fujikuroi complex (aka fusarium fujikuroi species complex)
D: fusarium culmorum (fusisporium culmorum) (aka fusarium culmorum)
E: einkorn wheat (aka triticum monococcum)
F: triticum
G: maize (aka zea mays)
H: triticum triunciale (aka aegilops triuncialis)
I: wild emmer wheat (aka triticum dicoccoides)
J: agromyces ramosum (aka agromyces ramosus)
K: gibellia cerealis (aka gibellina cerealis)
L: fusisporium cerealis (aka fusarium cerealis)
M: triticum tauschii (aka aegilops tauschii)
N: gibberella zeae (aka fusarium graminearum)
O: fusarium pseudograminearum
P: agrococcus terreus
Q: corn smut (aka mycosarcoma maydis)
R: barley (aka hordeum vulgare)
S: hordeum brachyantherum
T: wood-barley (aka hordelymus europaeus)
U: None of the above. | [N; B; R; G] |
<Instruct>: Given the context 'Analysis of the Fusarium graminearum species complex from wheat, barley and maize in South Africa provides evidence of species-specific differences in host preference.
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [fusarium graminearum species complex; wheat; barley; maize]
<Options>: A: zea saccharata (aka zea mays subsp. mays)
B: triticum triunciale (aka aegilops triuncialis)
C: fusisporium cerealis (aka fusarium cerealis)
D: corn ear worm (aka helicoverpa armigera)
E: avena agropyroides (aka helictochloa agropyroides)
F: corn smut (aka mycosarcoma maydis)
G: gibberella zeae (aka fusarium graminearum)
H: triticum
I: fusarium oxysporum species complex
J: fusarium avenaceum (gibberella avenacea r.j. cook, 1967) (aka fusarium avenaceum)
K: common wheat (aka triticum aestivum)
L: barley (aka hordeum vulgare)
M: two-rowed barley (aka hordeum vulgare subsp. vulgare)
N: polish wheat (aka triticum polonicum)
O: maize (aka zea mays)
P: rivet wheat (aka triticum turgidum)
Q: fusarium culmorum (fusisporium culmorum) (aka fusarium culmorum)
R: seaside barley (aka hordeum marinum)
S: None of the above. | [G; K; L; O] |
<Instruct>: Given the context 'Analysis of the Fusarium graminearum species complex from wheat, barley and maize in South Africa provides evidence of species-specific differences in host preference.
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [fusarium graminearum species complex; wheat; barley; maize]
<Options>: A: polish wheat (aka triticum polonicum)
B: triticum tauschii (aka aegilops tauschii)
C: fusarium solani f. phaseoli (aka fusarium phaseoli)
D: wood-barley (aka hordelymus europaeus)
E: maize (aka zea mays)
F: fusarium zeae (fusisporium zeae) (aka fusarium zeae)
G: fusarium solani complex (aka fusarium solani species complex)
H: barley (aka hordeum vulgare)
I: corn earworm (aka helicoverpa zea)
J: corn smut (aka mycosarcoma maydis)
K: zea ramosa (aka zea mays subsp. mays)
L: zelus grassans
M: fusarium heterosporum species complex
N: cone wheat (aka triticum turgidum)
O: gibberella zeae (aka fusarium graminearum)
P: hordeum brachyantherum
Q: gibellia cerealis (aka gibellina cerealis)
R: seaside barley (aka hordeum marinum)
S: bread wheat (aka triticum aestivum)
T: wild emmer wheat (aka triticum dicoccoides)
U: None of the above. | [O; S; H; E] |
<Instruct>: Given the context 'Species identity and trichothecene toxin potential of 560 members of the Fusarium graminearum species complex (FGSC) collected from diseased wheat, barley and maize in South Africa was determined using a microsphere-based multilocus genotyping assay.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [fusarium graminearum species complex; fgsc; wheat; barley]
<Options>: A: wild barley (aka hordeum vulgare subsp. spontaneum)
B: rauscher spleen focus-forming virus
C: freckled sea catfish (aka notarius lentiginosus)
D: fusarium oxysporum species complex
E: fccsc (aka fusarium citricola species complex)
F: hordeum marinum (seaside barley) (aka hordeum marinum)
G: triticum tauschii (aka aegilops tauschii)
H: rye (aka secale cereale) (aka secale cereale)
I: barley (aka hordeum vulgare)
J: wild rye (aka elymus)
K: wild emmer wheat (aka triticum dicoccoides)
L: fusarium fujikuroi species complex (gibberella fujikuroi complex) (aka fusarium fujikuroi species complex)
M: ga-fesv (aka gardner-arnstein feline sarcoma virus)
N: triticum
O: gibberella zeae (aka fusarium graminearum)
P: fusisporium avenaceum (aka fusarium avenaceum)
Q: fusarium solani complex (aka fusarium solani species complex)
R: triticum triunciale (aka aegilops triuncialis)
S: freckled rockfish (aka sebastes lentiginosus)
T: common wheat (aka triticum aestivum)
U: None of the above. | [O; O; T; I] |
<Instruct>: Given the context 'Species identity and trichothecene toxin potential of 560 members of the Fusarium graminearum species complex (FGSC) collected from diseased wheat, barley and maize in South Africa was determined using a microsphere-based multilocus genotyping assay.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [fusarium graminearum species complex; fgsc; wheat; barley]
<Options>: A: barley (aka hordeum vulgare)
B: fusisporium avenaceum (aka fusarium avenaceum)
C: triticum tauschii (aka aegilops tauschii)
D: fusarium solani complex (aka fusarium solani species complex)
E: hordeum marinum (seaside barley) (aka hordeum marinum)
F: rauscher spleen focus-forming virus
G: triticum
H: fusarium oxysporum species complex
I: rye (aka secale cereale) (aka secale cereale)
J: fccsc (aka fusarium citricola species complex)
K: freckled sea catfish (aka notarius lentiginosus)
L: fusarium fujikuroi species complex (gibberella fujikuroi complex) (aka fusarium fujikuroi species complex)
M: freckled rockfish (aka sebastes lentiginosus)
N: triticum triunciale (aka aegilops triuncialis)
O: wild barley (aka hordeum vulgare subsp. spontaneum)
P: wild rye (aka elymus)
Q: gibberella zeae (aka fusarium graminearum)
R: ga-fesv (aka gardner-arnstein feline sarcoma virus)
S: wild emmer wheat (aka triticum dicoccoides)
T: None of the above. | [Q; Q; T; A] |
<Instruct>: Given the context 'Species identity and trichothecene toxin potential of 560 members of the Fusarium graminearum species complex (FGSC) collected from diseased wheat, barley and maize in South Africa was determined using a microsphere-based multilocus genotyping assay.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [fusarium graminearum species complex; fgsc; wheat; barley]
<Options>: A: feline feces-associated genomovirus
B: rye (aka secale cereale) (aka secale cereale)
C: triticum triunciale (aka aegilops triuncialis)
D: triticum vulgare (aka triticum aestivum)
E: gibberella zeae (aka fusarium graminearum)
F: fusarium oxysporum species complex
G: rivet wheat (aka triticum turgidum)
H: hordeum marinum (seaside barley) (aka hordeum marinum)
I: gyrodinium fissum (aka levanderina fissa)
J: gibellia cerealis (aka gibellina cerealis)
K: barley (aka hordeum vulgare)
L: fgrv4 (aka fusarium graminearum orthocurvulavirus)
M: triticum
N: wild emmer wheat (aka triticum dicoccoides)
O: frigga
P: bread wheat (aka triticum aestivum)
Q: fusiformis furcosus (aka anaerorhabdus furcosa)
R: fusisporium cerealis (aka fusarium cerealis)
S: fusarium avenaceum (gibberella avenacea r.j. cook, 1967) (aka fusarium avenaceum)
T: fusarium moniliforme j. sheld., 1904 (aka fusarium verticillioides)
U: None of the above. | [E; E; D; K] |
<Instruct>: Given the context 'Species identity and trichothecene toxin potential of 560 members of the Fusarium graminearum species complex (FGSC) collected from diseased wheat, barley and maize in South Africa was determined using a microsphere-based multilocus genotyping assay.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [fusarium graminearum species complex; fgsc; wheat; barley]
<Options>: A: canadian hard winter wheat (aka triticum aestivum)
B: gibellia cerealis (aka gibellina cerealis)
C: einkorn wheat (aka triticum monococcum)
D: fusarium culmorum (fusisporium culmorum) (aka fusarium culmorum)
E: barley (aka hordeum vulgare)
F: gibberella zeae (aka fusarium graminearum)
G: fusarium pseudograminearum magoulivirus 1
H: triticum
I: gibberella fujikuroi complex (aka fusarium fujikuroi species complex)
J: triticum triunciale (aka aegilops triuncialis)
K: wood-barley (aka hordelymus europaeus)
L: feline feces-associated genomovirus
M: fusiformis furcosus (aka anaerorhabdus furcosa)
N: triticum tauschii (aka aegilops tauschii)
O: fgrv4 (aka fusarium graminearum orthocurvulavirus)
P: gibberella (aka fusarium)
Q: fractiunguis cuniculatus (aka scaphyglottis cuniculata)
R: wild barley (aka hordeum vulgare subsp. spontaneum)
S: rye (aka secale cereale) (aka secale cereale)
T: fusarium zeae (fusisporium zeae) (aka fusarium zeae)
U: None of the above. | [F; F; A; E] |
<Instruct>: Given the context 'Species identity and trichothecene toxin potential of 560 members of the Fusarium graminearum species complex (FGSC) collected from diseased wheat, barley and maize in South Africa was determined using a microsphere-based multilocus genotyping assay.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [fusarium graminearum species complex; fgsc; wheat; barley]
<Options>: A: triticum tauschii (aka aegilops tauschii)
B: hordeum vulgare (barley) (aka hordeum vulgare)
C: hordeum brachyantherum
D: frigga
E: freckled sea catfish (aka notarius lentiginosus)
F: triticum triunciale (aka aegilops triuncialis)
G: fractiunguis cuniculatus (aka scaphyglottis cuniculata)
H: gibberella zeae (aka fusarium graminearum)
I: triticum
J: fusiformis furcosus (aka anaerorhabdus furcosa)
K: wild barley (aka hordeum vulgare subsp. spontaneum)
L: triticum peregrinum (aka aegilops peregrina)
M: rauscher spleen focus-forming virus
N: fusarium zeae (fusisporium zeae) (aka fusarium zeae)
O: triticum vulgare (aka triticum aestivum)
P: fusarium solani f. phaseoli (aka fusarium phaseoli)
Q: fusarium pseudograminearum
R: barleys (aka hordeum)
S: bread wheat (aka triticum aestivum)
T: gibberella fujikuroi complex (aka fusarium fujikuroi species complex)
U: None of the above. | [H; H; O; B] |
<Instruct>: Given the context 'Species identity and trichothecene toxin potential of 560 members of the Fusarium graminearum species complex (FGSC) collected from diseased wheat, barley and maize in South Africa was determined using a microsphere-based multilocus genotyping assay.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [maize]
<Options>: A: zelus grassans
B: zea mays (zea mays var. japonica) (aka zea mays)
C: corn smut (aka mycosarcoma maydis)
D: agrococcus terreus
E: zea perennis (perennial teosinte) (aka zea perennis)
F: None of the above. | [B] |
<Instruct>: Given the context 'A significant difference, however, was identified in the composition of FGSC pathogens associated with Gibberella ear rot (GER) of maize as compared to Fusarium head blight (FHB) of wheat or barley (P<0.001).', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [fgsc; maize; wheat; barley]
<Options>: A: zea ramosa (aka zea mays subsp. mays)
B: maize (aka zea mays)
C: guenon simian foamy virus
D: corn ear worm (aka helicoverpa armigera)
E: gymnomitrion fissum
F: gibellia cerealis (aka gibellina cerealis)
G: fusarium subflagellisporum
H: hordeum brachyantherum
I: agrococcus terreus
J: hordeum vulgare (barley) (aka hordeum vulgare)
K: freckled rockfish (aka sebastes lentiginosus)
L: fgrv4 (aka fusarium graminearum orthocurvulavirus)
M: triticum
N: wheat (aka triticum aestivum)
O: triticum triunciale (aka aegilops triuncialis)
P: wild emmer wheat (aka triticum dicoccoides)
Q: one-grained wheat (aka triticum monococcum)
R: triticum peregrinum (aka aegilops peregrina)
S: agromyces ramosus (agromyces ramosum) (aka agromyces ramosus)
T: None of the above. | [T; B; N; J] |
<Instruct>: Given the context 'A significant difference, however, was identified in the composition of FGSC pathogens associated with Gibberella ear rot (GER) of maize as compared to Fusarium head blight (FHB) of wheat or barley (P<0.001).', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [fgsc; maize; wheat; barley]
<Options>: A: hordeum vulgare (barley) (aka hordeum vulgare)
B: agrococcus citreus
C: polish wheat (aka triticum polonicum)
D: fusiformis furcosus (aka anaerorhabdus furcosa)
E: ferruginous spindle (aka fusinus ferrugineus)
F: one-grained wheat (aka triticum monococcum)
G: barleys (aka hordeum)
H: fsgcv1 (aka gemycircularvirus furse1)
I: maize weevil (aka sitophilus zeamais)
J: heliothis zea (aka helicoverpa zea)
K: english wheat (aka triticum turgidum)
L: fusarium pseudograminearum magoulivirus 1
M: triticum
N: hordeum brachyantherum
O: hordeum marinum (seaside barley) (aka hordeum marinum)
P: freckled sea catfish (aka notarius lentiginosus)
Q: avena agropyroides (aka helictochloa agropyroides)
R: zea mays (zea mays var. japonica) (aka zea mays)
S: common wheat (aka triticum aestivum)
T: None of the above. | [T; R; S; A] |
<Instruct>: Given the context 'A significant difference, however, was identified in the composition of FGSC pathogens associated with Gibberella ear rot (GER) of maize as compared to Fusarium head blight (FHB) of wheat or barley (P<0.001).', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [fgsc; maize; wheat; barley]
<Options>: A: feline feces-associated genomovirus
B: zea mays (zea mays var. japonica) (aka zea mays)
C: triticum
D: barley (aka hordeum vulgare)
E: triticum triunciale (aka aegilops triuncialis)
F: ga-fesv (aka gardner-arnstein feline sarcoma virus)
G: agrococcus terreus
H: frigga
I: guenon simian foamy virus
J: common wheat (aka triticum aestivum)
K: corn ear worm (aka helicoverpa armigera)
L: triticum aethiopicum (aka triticum turgidum)
M: maize weevil (aka sitophilus zeamais)
N: gibellia cerealis (aka gibellina cerealis)
O: triticum aegilops (aka aegilops tauschii)
P: freckled rockfish (aka sebastes lentiginosus)
Q: wood-barley (aka hordelymus europaeus)
R: avena agropyroides (aka helictochloa agropyroides)
S: None of the above. | [S; B; J; D] |
<Instruct>: Given the context 'A significant difference, however, was identified in the composition of FGSC pathogens associated with Gibberella ear rot (GER) of maize as compared to Fusarium head blight (FHB) of wheat or barley (P<0.001).', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [fgsc; maize; wheat; barley]
<Options>: A: agrococcus citreus
B: wild rye (aka elymus)
C: rye (aka secale cereale) (aka secale cereale)
D: common wheat (aka triticum aestivum)
E: gibellia cerealis (aka gibellina cerealis)
F: english wheat (aka triticum turgidum)
G: giant needlefish (aka tylosurus crocodilus)
H: triticum aegilops (aka aegilops tauschii)
I: polish wheat (aka triticum polonicum)
J: zelus grassans
K: gemycircularvirus furse1 (fsgcv1) (aka gemycircularvirus furse1)
L: zea mays (zea mays var. japonica) (aka zea mays)
M: avenula agropyroides (aka helictochloa agropyroides)
N: one-grained wheat (aka triticum monococcum)
O: fibriciellum
P: fccsc (aka fusarium citricola species complex)
Q: two-rowed barley (aka hordeum vulgare subsp. vulgare)
R: hordeum vulgare (barley) (aka hordeum vulgare)
S: heliothis zea (aka helicoverpa zea)
T: fractiunguis cuniculatus (aka scaphyglottis cuniculata)
U: None of the above. | [U; L; D; R] |
<Instruct>: Given the context 'F. graminearum accounted for more than 85% of the FGSC isolates associated with FHB of wheat and barley (N=425), and was also the dominant species among isolates from maize roots (N=35).', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [f. graminearum; fgsc; wheat; barley]
<Options>: A: feline feces-associated genomovirus
B: freckled rockfish (aka sebastes lentiginosus)
C: triticum
D: triticum triunciale (aka aegilops triuncialis)
E: wild emmer wheat (aka triticum dicoccoides)
F: fusisporium avenaceum (aka fusarium avenaceum)
G: wood-barley (aka hordelymus europaeus)
H: gibberella zeae (schwein.) petch, 1936 (aka fusarium graminearum)
I: cone wheat (aka triticum turgidum)
J: gymnomitrion fissum
K: fusarium gossypinum
L: hordeum vulgare (barley) (aka hordeum vulgare)
M: gyrodinium fissum (aka levanderina fissa)
N: triticum aegilops (aka aegilops tauschii)
O: fusarium graminum
P: domesticated barley (aka hordeum vulgare subsp. vulgare)
Q: fsgcv1 (aka gemycircularvirus furse1)
R: wild barley (aka hordeum vulgare subsp. spontaneum)
S: common wheat (aka triticum aestivum)
T: fusarium thapsina (aka fusarium thapsinum)
U: None of the above. | [H; H; S; L] |
<Instruct>: Given the context 'F. graminearum accounted for more than 85% of the FGSC isolates associated with FHB of wheat and barley (N=425), and was also the dominant species among isolates from maize roots (N=35).', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [f. graminearum; fgsc; wheat; barley]
<Options>: A: hordeum vulgare (barley) (aka hordeum vulgare)
B: canadian hard winter wheat (aka triticum aestivum)
C: two-rowed barley (aka hordeum vulgare subsp. vulgare)
D: fusarium praegraminearum
E: polish wheat (aka triticum polonicum)
F: fusarium graminearum (gibberella zeae (schwein.) petch, 1936) (aka fusarium graminearum)
G: gibellia cerealis (aka gibellina cerealis)
H: triticum
I: ga-fesv (aka gardner-arnstein feline sarcoma virus)
J: wild emmer wheat (aka triticum dicoccoides)
K: fibriciellum
L: triticum tauschii (aka aegilops tauschii)
M: fusarium subflagellisporum
N: fusarium pseudograminearum
O: triticum triunciale (aka aegilops triuncialis)
P: fractiunguis cuniculatus (aka scaphyglottis cuniculata)
Q: fusarium zeae (fusisporium zeae) (aka fusarium zeae)
R: fusarium moniliforme (aka fusarium verticillioides)
S: wood-barley (aka hordelymus europaeus)
T: rauscher spleen focus-forming virus
U: None of the above. | [F; F; B; A] |
<Instruct>: Given the context 'F. graminearum accounted for more than 85% of the FGSC isolates associated with FHB of wheat and barley (N=425), and was also the dominant species among isolates from maize roots (N=35).', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [f. graminearum; fgsc; wheat; barley]
<Options>: A: triticum tauschii (aka aegilops tauschii)
B: triticum triunciale (aka aegilops triuncialis)
C: fusarium praegraminearum
D: wheat (aka triticum aestivum)
E: triticum peregrinum (aka aegilops peregrina)
F: giant needlefish (aka tylosurus crocodilus)
G: gibellina cerealis (gibellia cerealis) (aka gibellina cerealis)
H: fusarium moniliforme (aka fusarium verticillioides)
I: fusisporium cerealis (aka fusarium cerealis)
J: two-rowed barley (aka hordeum vulgare subsp. vulgare)
K: gibberella zeae (aka fusarium graminearum)
L: ga-fesv (aka gardner-arnstein feline sarcoma virus)
M: rauscher spleen focus-forming virus
N: fusiformis furcosus (aka anaerorhabdus furcosa)
O: rye (aka secale cereale) (aka secale cereale)
P: hordeum vulgare (barley) (aka hordeum vulgare)
Q: triticum
R: fusarium magnum
S: fractiunguis cuniculatus (aka scaphyglottis cuniculata)
T: None of the above. | [K; K; D; P] |
<Instruct>: Given the context 'F. graminearum accounted for more than 85% of the FGSC isolates associated with FHB of wheat and barley (N=425), and was also the dominant species among isolates from maize roots (N=35).', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [f. graminearum; fgsc; wheat; barley]
<Options>: A: fusarium avenaceum (gibberella avenacea r.j. cook, 1967) (aka fusarium avenaceum)
B: gyrodinium fissum (aka levanderina fissa)
C: one-grained wheat (aka triticum monococcum)
D: rye (aka secale cereale) (aka secale cereale)
E: triticum peregrinum (aka aegilops peregrina)
F: barley (aka hordeum vulgare)
G: wood-barley (aka hordelymus europaeus)
H: barleys (aka hordeum)
I: ga-fesv (aka gardner-arnstein feline sarcoma virus)
J: freckled sea catfish (aka notarius lentiginosus)
K: fusarium pseudograminearum magoulivirus 1
L: fusarium nodosum
M: fccsc (aka fusarium citricola species complex)
N: wild emmer wheat (aka triticum dicoccoides)
O: gibellina cerealis (gibellia cerealis) (aka gibellina cerealis)
P: fusarium praegraminearum
Q: fusarium culmorum (fusisporium culmorum) (aka fusarium culmorum)
R: fusarium graminearum (gibberella zeae (schwein.) petch, 1936) (aka fusarium graminearum)
S: triticum
T: triticum vulgare (aka triticum aestivum)
U: None of the above. | [R; R; T; F] |
<Instruct>: Given the context 'F. graminearum accounted for more than 85% of the FGSC isolates associated with FHB of wheat and barley (N=425), and was also the dominant species among isolates from maize roots (N=35).', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [maize]
<Options>: A: agromyces ramosum (aka agromyces ramosus)
B: zea mays (zea mays var. japonica) (aka zea mays)
C: agrococcus terreus
D: perennial teosinte (aka zea perennis)
E: avena agropyroides (aka helictochloa agropyroides)
F: None of the above. | [B] |
<Instruct>: Given the context 'However, with the exception of a single isolate identified as an interspecific hybrid between Fusariumboothii and F. graminearum, GER of maize (N=100) was exclusively associated with F. boothii.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [fusariumboothii; f. graminearum; maize; f. boothii]
<Options>: A: fusarium culmorum (fusisporium culmorum) (aka fusarium culmorum)
B: fusarium gamsii
C: fusarium graminearum (gibberella zeae (schwein.) petch, 1936) (aka fusarium graminearum)
D: fusarium boothii
E: fundicoccus fermenti
F: fusarium matuoi (aka fusicolla matuoi)
G: corn smut (aka mycosarcoma maydis)
H: fusisporium cerealis (aka fusarium cerealis)
I: fusarium ananatum
J: corn ear worm (aka helicoverpa armigera)
K: fusarium pseudograminearum
L: maize (aka zea mays)
M: fusarium citri
N: thyronectria boothii (pleonectria boothii) (aka thyronectria boothii)
O: zelus grassans
P: fusarium domesticum (trichothecium domesticum) (aka fusarium domesticum)
Q: zea saccharata (aka zea mays subsp. mays)
R: fusarium nodosum
S: None of the above. | [D; C; L; D] |
<Instruct>: Given the context 'However, with the exception of a single isolate identified as an interspecific hybrid between Fusariumboothii and F. graminearum, GER of maize (N=100) was exclusively associated with F. boothii.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [fusariumboothii; f. graminearum; maize; f. boothii]
<Options>: A: fusarium graminearum (gibberella zeae (schwein.) petch, 1936) (aka fusarium graminearum)
B: maize (aka zea mays)
C: thyronectria boothii (pleonectria boothii) (aka thyronectria boothii)
D: fusisporium cerealis (aka fusarium cerealis)
E: fusarium pseudograminearum
F: fusarium domesticum (trichothecium domesticum) (aka fusarium domesticum)
G: fusarium nodosum
H: fusarium matuoi (aka fusicolla matuoi)
I: fusarium ananatum
J: corn ear worm (aka helicoverpa armigera)
K: zea saccharata (aka zea mays subsp. mays)
L: corn smut (aka mycosarcoma maydis)
M: fusarium culmorum (fusisporium culmorum) (aka fusarium culmorum)
N: fusarium gamsii
O: zelus grassans
P: fundicoccus fermenti
Q: fusarium citri
R: None of the above. | [R; A; B; R] |
<Instruct>: Given the context 'However, with the exception of a single isolate identified as an interspecific hybrid between Fusariumboothii and F. graminearum, GER of maize (N=100) was exclusively associated with F. boothii.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [fusariumboothii; f. graminearum; maize; f. boothii]
<Options>: A: maize (aka zea mays)
B: fusarium thapsina (aka fusarium thapsinum)
C: frerea indica (aka boucerosia frerei)
D: fusarium nodosum
E: fusarium tropicale
F: avenula agropyroides (aka helictochloa agropyroides)
G: corn earworm (aka helicoverpa zea)
H: maize (aka zea mays subsp. mays)
I: fusarium boothii
J: sphaeria zeae (aka fusarium graminearum)
K: maize weevil (aka sitophilus zeamais)
L: fusarium brasilicum
M: fusarium graminearum x fusarium boothii
N: fusarium gossypinum
O: fusarium graminearum (gibberella zeae (schwein.) petch, 1936) (aka fusarium graminearum)
P: fusarium citri
Q: fusarium moniliforme (aka fusarium verticillioides)
R: None of the above. | [I; J; A; I] |
<Instruct>: Given the context 'However, with the exception of a single isolate identified as an interspecific hybrid between Fusariumboothii and F. graminearum, GER of maize (N=100) was exclusively associated with F. boothii.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [fusariumboothii; f. graminearum; maize; f. boothii]
<Options>: A: fusarium vorosii
B: fusarium ananatum
C: fusarium pseudograminearum
D: fusarium magnum
E: agromyces ramosus (agromyces ramosum) (aka agromyces ramosus)
F: fusarium fujikuroi b14
G: fusarium gossypinum
H: agrococcus citreus
I: fusarium boothii
J: fusisporium cerealis (aka fusarium cerealis)
K: gibberella zeae (schwein.) petch, 1936 (aka fusarium graminearum)
L: corn earworm (aka helicoverpa zea)
M: fusarium brasilicum
N: maize weevil (aka sitophilus zeamais)
O: fusarium graminearum x fusarium boothii
P: fusarium temperatum
Q: zea mays (zea mays var. japonica) (aka zea mays)
R: fusarium babinda
S: None of the above. | [I; K; Q; I] |
<Instruct>: Given the context 'However, with the exception of a single isolate identified as an interspecific hybrid between Fusariumboothii and F. graminearum, GER of maize (N=100) was exclusively associated with F. boothii.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [fusariumboothii; f. graminearum; maize; f. boothii]
<Options>: A: fusarium dendrobii
B: fusarium thapsina (aka fusarium thapsinum)
C: fusarium semitectum (aka fusarium incarnatum)
D: fusarium citri
E: fusarium graminearum (gibberella zeae (schwein.) petch, 1936) (aka fusarium graminearum)
F: fusarium zeae (fusisporium zeae) (aka fusarium zeae)
G: corn ear worm (aka helicoverpa armigera)
H: maize weevil (aka sitophilus zeamais)
I: fusisporium cerealis (aka fusarium cerealis)
J: agrococcus terreus
K: fusarium fecundum
L: heliothis zea (aka helicoverpa zea)
M: fusarium moniliforme (aka fusarium verticillioides)
N: fusarium boothii
O: fusarium temperatum
P: zea mays (zea mays var. japonica) (aka zea mays)
Q: None of the above. | [N; E; P; N] |
<Instruct>: Given the context 'The predominance of F. graminearum among FHB isolates, and the near exclusivity of F. boothii among GER isolates, was observed across all cultivars, collection dates, and provinces sampled.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [f. graminearum; f. boothii]
<Options>: A: thyronectria boothii (pleonectria boothii) (aka thyronectria boothii)
B: fusarium citri
C: fusarium nodosum
D: fusarium graminearum (gibberella zeae (schwein.) petch, 1936) (aka fusarium graminearum)
E: fusarium fujikuroi b14
F: fusarium boothii
G: boothiomyces
H: fusarium graminum
I: fusarium pseudograminearum
J: fusarium domesticum (trichothecium domesticum) (aka fusarium domesticum)
K: None of the above. | [D; F] |
<Instruct>: Given the context 'The predominance of F. graminearum among FHB isolates, and the near exclusivity of F. boothii among GER isolates, was observed across all cultivars, collection dates, and provinces sampled.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [f. graminearum; f. boothii]
<Options>: A: fusarium graminearum x fusarium boothii
B: fusarium domesticum (trichothecium domesticum) (aka fusarium domesticum)
C: fusarium moniliforme (aka fusarium verticillioides)
D: thyronectria boothii (pleonectria boothii) (aka thyronectria boothii)
E: gibberella zeae (aka fusarium graminearum)
F: fusarium zeae (fusisporium zeae) (aka fusarium zeae)
G: fusarium citri
H: fusisporium cerealis (aka fusarium cerealis)
I: fusarium boothii
J: None of the above. | [E; I] |
<Instruct>: Given the context 'Because these results suggest a difference in host preference among species of the FGSC, we hypothesize that F. graminearum may be less well adapted to infect maize ears than other members of the FGSC.
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [fgsc; f. graminearum; maize]
<Options>: A: agromyces ramosus (agromyces ramosum) (aka agromyces ramosus)
B: fusarium nodosum
C: guenon simian foamy virus
D: ga-fesv (aka gardner-arnstein feline sarcoma virus)
E: fusarium magnum
F: agrococcus citreus
G: fgrv4 (aka fusarium graminearum orthocurvulavirus)
H: agrococcus terreus
I: gibberella zeae (schwein.) petch, 1936 (aka fusarium graminearum)
J: fusisporium avenaceum (aka fusarium avenaceum)
K: fusarium thapsina (aka fusarium thapsinum)
L: fusiformis furcosus (aka anaerorhabdus furcosa)
M: maize (aka zea mays)
N: feline feces-associated genomovirus
O: corn smut (aka mycosarcoma maydis)
P: None of the above. | [I; I; M] |
<Instruct>: Given the context 'Because these results suggest a difference in host preference among species of the FGSC, we hypothesize that F. graminearum may be less well adapted to infect maize ears than other members of the FGSC.
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [fgsc; f. graminearum; maize]
<Options>: A: fusarium nodosum
B: fusarium moniliforme (aka fusarium verticillioides)
C: fccsc (aka fusarium citricola species complex)
D: fusiformis furcosus (aka anaerorhabdus furcosa)
E: fusarium magnum
F: gymnomitrion fissum
G: fusarium graminearum (gibberella zeae (schwein.) petch, 1936) (aka fusarium graminearum)
H: guenon simian foamy virus
I: corn ear worm (aka helicoverpa armigera)
J: gibberella avenacea (aka fusarium avenaceum)
K: maize (aka zea mays)
L: heliothis zea (aka helicoverpa zea)
M: freckled sea catfish (aka notarius lentiginosus)
N: corn smut (aka mycosarcoma maydis)
O: agrococcus terreus
P: None of the above. | [G; G; K] |
<Instruct>: Given the context 'Because these results suggest a difference in host preference among species of the FGSC, we hypothesize that F. graminearum may be less well adapted to infect maize ears than other members of the FGSC.
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [fgsc; f. graminearum; maize]
<Options>: A: fusiformis furcosus (aka anaerorhabdus furcosa)
B: zea saccharata (aka zea mays subsp. mays)
C: fusarium toxicum
D: fusarium avenaceum (gibberella avenacea r.j. cook, 1967) (aka fusarium avenaceum)
E: sphaeria zeae (aka fusarium graminearum)
F: fusarium nodosum
G: giant needlefish (aka tylosurus crocodilus)
H: corn smut (aka mycosarcoma maydis)
I: corn ear worm (aka helicoverpa armigera)
J: fusarium moniliforme (aka fusarium verticillioides)
K: freckled sea catfish (aka notarius lentiginosus)
L: feline feces-associated genomovirus
M: maize (aka zea mays)
N: avena agropyroides (aka helictochloa agropyroides)
O: ferruginous spindle (aka fusinus ferrugineus)
P: None of the above. | [E; E; M] |
<Instruct>: Given the context 'Gene expression associated with vegetative incompatibility in Amylostereum areolatum.
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [amylostereum areolatum]
<Options>: A: amylostereum areolatum 19.12
B: annulohypoxylon areolatum (rosellinia areolata) (aka annulohypoxylon areolatum)
C: amylostereum orientale
D: coccosperma areolatum (aka erica areolata)
E: thelephora areolata (aka amylostereum areolatum)
F: None of the above. | [E] |
<Instruct>: Given the context 'In this study, suppression subtractive hybridization (SSH) followed by pyrosequencing and quantitative reverse transcription PCR were used to identify genes that are selectively expressed when vegetatively incompatible individuals of Amylostereum areolatum interact.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [amylostereum areolatum]
<Options>: A: erythroxylum areolatum
B: aphidius areolatus
C: anthorrhiza areolata
D: amylostereum areolatum (thelephora areolata) (aka amylostereum areolatum)
E: xylocampa areola (phalaena areola) (aka xylocampa areola)
F: None of the above. | [D] |
<Instruct>: Given the context 'Results of this study have considerably increased our knowledge of the processes underlying vegetative incompatibility in Basidiomycetes in general and A. areolatum in particular.
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [a. areolatum]
<Options>: A: thelephora areolata (aka amylostereum areolatum)
B: anthorrhiza areolata
C: adaeulum areolatum (adaeum areolatum) (aka adaeulum areolatum)
D: areotilla trifasciata
E: acrostichum areolatum (aka lorinseria areolata)
F: None of the above. | [A] |
<Instruct>: Given the context 'Molecular structure of the prothoracicotropic hormone gene in the northern house mosquito, Culex pipiens, and its expression analysis in association with diapause and blood feeding.
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [northern house mosquito; culex pipiens]
<Options>: A: culex sitiens
B: northern house mosquito (aka culex pipiens)
C: culex atratus
D: culex tarsalis
E: lesser house fly (aka fannia canicularis)
F: None of the above. | [B; B] |
<Instruct>: Given the context 'Molecular structure of the prothoracicotropic hormone gene in the northern house mosquito, Culex pipiens, and its expression analysis in association with diapause and blood feeding.
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [northern house mosquito; culex pipiens]
<Options>: A: culex atratus
B: culex sitiens
C: lesser house fly (aka fannia canicularis)
D: culex tarsalis
E: None of the above. | [E; E] |
<Instruct>: Given the context 'Molecular structure of the prothoracicotropic hormone gene in the northern house mosquito, Culex pipiens, and its expression analysis in association with diapause and blood feeding.
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [northern house mosquito; culex pipiens]
<Options>: A: culex sitiens
B: southern house mosquito (aka culex quinquefasciatus)
C: mosquito (aka anopheles moucheti)
D: culex vittatus (aka aedes vittatus)
E: common house mosquito (aka culex pipiens)
F: None of the above. | [E; E] |
<Instruct>: Given the context 'We cloned the gene that encodes prothoracicotropic hormone (PTTH) in the northern house mosquito, Culex pipiens, and investigated its expression profile in short-day (diapause-destined) and long-day (nondiapause-destined) individuals from the fourth-instar larval stage to 2 months of adulthood, as well as after a blood meal.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [northern house mosquito; culex pipiens]
<Options>: A: southern house mosquito (aka culex quinquefasciatus)
B: culex sitiens
C: mosquito (aka anopheles moucheti)
D: culex tarsalis
E: lesser house fly (aka fannia canicularis)
F: culex pipiens (northern house mosquito) (aka culex pipiens)
G: None of the above. | [F; F] |
<Instruct>: Given the context 'We cloned the gene that encodes prothoracicotropic hormone (PTTH) in the northern house mosquito, Culex pipiens, and investigated its expression profile in short-day (diapause-destined) and long-day (nondiapause-destined) individuals from the fourth-instar larval stage to 2 months of adulthood, as well as after a blood meal.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [northern house mosquito; culex pipiens]
<Options>: A: culex atratus
B: lesser house fly (aka fannia canicularis)
C: southern house mosquito (aka culex quinquefasciatus)
D: culex domesticus (aka culex pipiens)
E: culex sitiens
F: northern house mosquito (aka culex pipiens pallens)
G: None of the above. | [D; D] |
<Instruct>: Given the context 'The deduced C. pipiens PTTH (Cupip-PTTH) amino acid sequence contains seven cysteines with a specific spacing pattern.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [c. pipiens]
<Options>: A: culex sitiens
B: culicoides sitiens
C: culex pipiens (northern house mosquito) (aka culex pipiens)
D: None of the above. | [C] |
<Instruct>: Given the context 'Sequence alignment suggests that Cupip-PTTH is 23% identical to Drosophila melanogaster PTTH, but is >=59% identical to the PTTHs of other mosquitoes.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [drosophila melanogaster]
<Options>: A: drosophila melanogaster (sophophora melanogaster) (aka drosophila melanogaster)
B: fruit fly (aka drosophila <flies,genus>)
C: mytilia melanogaster (aka rhinophis melanogaster)
D: melanogaster <basidiomycete fungi> (melanogaster) (aka melanogaster <basidiomycete fungi>)
E: drosophila persimilis
F: None of the above. | [A] |
<Instruct>: Given the context 'Cupip-PTTH has structural characteristics similar to those of Bombyx mori PTTH and some vertebrate nerve growth factors with cysteine-knot motifs.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [bombyx mori]
<Options>: A: bombyx timon (aka pygaera timon)
B: bombyx fusca (aka pygmaena fusca)
C: bombus muscorum
D: apis morio (aka bombus morio)
E: silk moth (aka bombyx mori)
F: None of the above. | [E] |
<Instruct>: Given the context 'Interplay between the parasite Amoebophrya sp. (Alveolata) and the cyst formation of the red tide dinoflagellate Scrippsiella trochoidea.
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [amoebophrya sp.; scrippsiella trochoidea]
<Options>: A: scrippsiella trochoidea var. aciculifera
B: scrippsiella trochoidea (scrippsiella faeronese) (aka scrippsiella trochoidea)
C: amoebophrya sp. pz11_a114
D: amoebophrya sp. ex karlodinium micrum
E: trochoidea elegans
F: amoebophrya sp. at5.2
G: typhula sphaeroidea
H: amoebophrya sp. pz11_a149
I: scrippsiella trifida
J: amoebophrya sp.
K: None of the above. | [J; B] |
<Instruct>: Given the context 'Interplay between the parasite Amoebophrya sp. (Alveolata) and the cyst formation of the red tide dinoflagellate Scrippsiella trochoidea.
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [amoebophrya sp.; scrippsiella trochoidea]
<Options>: A: scaptomyza trochanterata
B: amoebophrya
C: scrippsiella trochoidea (scrippsiella faeronese) (aka scrippsiella trochoidea)
D: scrippsiella spinifera
E: amoeba sp.
F: tetraspora discoidea
G: amoebophrya sp.
H: amoebophrya sp. pz09_a91
I: amoebophrya sp. pz11_a117
J: scrippsiella sweeneyae
K: None of the above. | [G; C] |
<Instruct>: Given the context 'This is the case for Amoebophrya spp.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [amoebophrya spp.]
<Options>: A: amoebophrya sp. pz11_a149
B: amoebophrya sp. a120
C: amoebophrya sp. pz11_a114
D: amoebophrya sp.
E: amoebophrya
F: None of the above. | [D] |
<Instruct>: Given the context 'We successfully established infections by Amoebophrya sp. in the red tide dinoflagellate Scrippsiella trochoidea.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [amoebophrya sp.; scrippsiella trochoidea]
<Options>: A: amoebophrya sp. ex akashiwo sanguinea
B: scrippsiella trifida
C: amoebophrya sp. ex akashiwo sanguineaum
D: amoebophrya sp. pz09_a51
E: scrippsiella faeronese (aka scrippsiella trochoidea)
F: scrippsiella spinifera
G: trochoidea elegans
H: amoebophrya sp.
I: amoebophrya sp. rc11_a137
J: scrippsiella sweeneyae
K: None of the above. | [H; E] |
<Instruct>: Given the context 'We successfully established infections by Amoebophrya sp. in the red tide dinoflagellate Scrippsiella trochoidea.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [amoebophrya sp.; scrippsiella trochoidea]
<Options>: A: amoebophrya sp. pz11_a149
B: trochoidea elegans
C: scrippsiella irregularis
D: amoebophrya sp.
E: amoebophryaceae sp.
F: amoebophrya sp. a120
G: ammothea sp.
H: sporastatia crassulata
I: scrippsiella trifida
J: scrippsiella trochoidea (scrippsiella faeronese) (aka scrippsiella trochoidea)
K: None of the above. | [D; J] |
<Instruct>: Given the context 'For example, aflatoxin biosynthesis in Aspergillus parasiticus has been studied intensively because this mycotoxin is highly toxic, mutagenic, and carcinogenic in humans and animals.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [aspergillus parasiticus; humans]
<Options>: A: human louse (aka pediculus humanus)
B: aspergillus parasiticus
C: aspergillus protuberus
D: hominidae (great apes) (aka hominidae)
E: glossus humanus (cardium humanum) (aka glossus humanus)
F: homo sapiens (human) (aka homo sapiens)
G: aspergillus porosus
H: tieghemiomyces parasiticus
I: homo (humans) (aka homo)
J: aspergillus fumigatus fresen., 1863 (aka aspergillus fumigatus)
K: None of the above. | [B; F] |
<Instruct>: Given the context 'For example, aflatoxin biosynthesis in Aspergillus parasiticus has been studied intensively because this mycotoxin is highly toxic, mutagenic, and carcinogenic in humans and animals.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [aspergillus parasiticus; humans]
<Options>: A: aspergillus fumigatus fresen., 1863 (aka aspergillus fumigatus)
B: glossus humanus (cardium humanum) (aka glossus humanus)
C: homo (humans) (aka homo)
D: aspergillus protuberus
E: homo sapiens (human) (aka homo sapiens)
F: human louse (aka pediculus humanus)
G: hominidae (great apes) (aka hominidae)
H: tieghemiomyces parasiticus
I: aspergillus porosus
J: None of the above. | [J; E] |
<Instruct>: Given the context 'For example, aflatoxin biosynthesis in Aspergillus parasiticus has been studied intensively because this mycotoxin is highly toxic, mutagenic, and carcinogenic in humans and animals.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [aspergillus parasiticus; humans]
<Options>: A: homo (humans) (aka homo)
B: cardium humanum (aka glossus humanus)
C: alysidiella parasitica (aka thyrinula parasitica)
D: human (aka homo sapiens)
E: aspergillus parasiticus
F: aspergillus cerealis
G: macrobiotus sapiens
H: tieghemiomyces parasiticus
I: pediculus humanus (human louse) (aka pediculus humanus)
J: agaricus parasiticus (aka asterophora parasitica)
K: None of the above. | [E; D] |
<Instruct>: Given the context 'Glucosinolates are plant secondary metabolites used in host plant recognition by insects specialized on Brassicaceae, such as the diamondback moth (DBM), Plutella xylostella.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [diamondback moth; dbm; plutella xylostella]
<Options>: A: bombus brodmannicus
B: plutellus
C: hemineura dispar
D: dendronotus stellifer (aka bornella stellifera)
E: mediaster
F: lonicera xylosteum
G: plutella armoraciae
H: bombus dahlbomii
I: bombus lepidus
J: plutella karsholtella
K: bombyx densonucleosis virus (aka bombyx mori densovirus)
L: diamondback moth (aka plutella xylostella)
M: spodoptera frugiperda (fall armyworm) (aka spodoptera frugiperda)
N: bombus difficillimus
O: None of the above. | [L; L; L] |
<Instruct>: Given the context 'Glucosinolates are plant secondary metabolites used in host plant recognition by insects specialized on Brassicaceae, such as the diamondback moth (DBM), Plutella xylostella.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [diamondback moth; dbm; plutella xylostella]
<Options>: A: phyllonorycter lautella (lithocolletis lautella) (aka phyllonorycter lautella)
B: plutella porrectella (plutella (pseudoplutella) porrectella) (aka plutella porrectella)
C: pluteus xylophilus (entoloma xylophilum) (aka pluteus xylophilus)
D: pluteus xanthophaeus (aka pluteus galeroides)
E: gypsy moth (aka lymantria dispar)
F: brachymyrmex
G: bulimus dubiosus (aka moricandia fusiformis)
H: diamondback moth (aka plutella xylostella)
I: mediaster
J: northern corn rootworm (aka diabrotica barberi)
K: bombus terrestris dalmatinus
L: fall armyworm (aka spodoptera frugiperda)
M: male bamboo (aka dendrocalamus strictus)
N: doris tiger moth (aka apantesis doris)
O: None of the above. | [H; H; H] |
<Instruct>: Given the context 'Glucosinolates are plant secondary metabolites used in host plant recognition by insects specialized on Brassicaceae, such as the diamondback moth (DBM), Plutella xylostella.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [diamondback moth; dbm; plutella xylostella]
<Options>: A: male bamboo (aka dendrocalamus strictus)
B: bombus breviceps (bombus dentatus) (aka bombus breviceps)
C: pleurota gallicella
D: plutella hyperboreella
E: bombus lepidus
F: plutella
G: gypsy moth (aka lymantria dispar)
H: greater red dart moth (aka abagrotis alternata)
I: bombus brodmannicus
J: southern armyworm (aka spodoptera eridania)
K: bombus digressus (megabombus digressus) (aka bombus digressus)
L: bulimus dubiosus (aka moricandia fusiformis)
M: diamondback moth (aka plutella xylostella)
N: pluteus hirtellus
O: None of the above. | [M; M; M] |
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