go_id
string
go_numeric_id
int64
name
string
namespace
string
definition
string
definition_xrefs
list
comment
string
synonyms
list
synonym_scopes
list
alt_ids
list
subsets
list
xrefs
list
is_a_ids
list
relationship_edges
list
relationship_types
list
relationship_target_ids
list
parent_ids
list
intersection_of
list
union_of
list
disjoint_from
list
replaced_by
list
consider
list
property_values
list
created_by
string
creation_date
string
is_obsolete
bool
in_go_basic
bool
split_bucket
int64
GO:0002054
2,054
nucleobase binding
molecular_function
Binding to a nucleobase, any of a class of pyrmidines or purines, organic nitrogenous bases.
[ "GOC:hjd" ]
null
[]
[]
[]
[ "goslim_pir" ]
[]
[ "GO:1901363" ]
[]
[]
[]
[ "GO:1901363" ]
[]
[]
[]
[]
[]
[]
null
null
false
true
7
GO:0002055
2,055
adenine binding
molecular_function
Binding to adenine, a purine base.
[ "GOC:hjd" ]
null
[ "6-aminopurine binding" ]
[ "EXACT" ]
[]
[]
[]
[ "GO:0002060" ]
[]
[]
[]
[ "GO:0002060" ]
[]
[]
[]
[]
[]
[]
null
null
false
true
7
GO:0002056
2,056
cytosine binding
molecular_function
Binding to cytosine.
[ "GOC:hjd", "GOC:vw" ]
null
[]
[]
[]
[]
[]
[ "GO:0002061" ]
[]
[]
[]
[ "GO:0002061" ]
[]
[]
[]
[]
[]
[]
null
null
false
true
6
GO:0002057
2,057
guanine binding
molecular_function
Binding to guanine.
[ "GOC:hjd" ]
null
[]
[]
[]
[]
[]
[ "GO:0002060" ]
[]
[]
[]
[ "GO:0002060" ]
[]
[]
[]
[]
[]
[]
null
null
false
true
6
GO:0002058
2,058
uracil binding
molecular_function
Binding to uracil.
[ "GOC:hjd" ]
null
[]
[]
[]
[]
[]
[ "GO:0002061" ]
[]
[]
[]
[ "GO:0002061" ]
[]
[]
[]
[]
[]
[]
null
null
false
true
6
GO:0002059
2,059
thymine binding
molecular_function
Binding to thymine.
[ "GOC:hjd" ]
null
[]
[]
[]
[]
[]
[ "GO:0002061" ]
[]
[]
[]
[ "GO:0002061" ]
[]
[]
[]
[]
[]
[]
null
null
false
true
1
GO:0002060
2,060
purine nucleobase binding
molecular_function
Binding to a purine nucleobase, an organic nitrogenous base with a purine skeleton.
[ "GOC:hjd" ]
null
[ "purine base binding", "purine binding" ]
[ "EXACT", "RELATED" ]
[]
[]
[]
[ "GO:0002054" ]
[]
[]
[]
[ "GO:0002054" ]
[]
[]
[]
[]
[]
[]
null
null
false
true
6
GO:0002061
2,061
pyrimidine nucleobase binding
molecular_function
Binding to a pyrimidine nucleobase, an organic nitrogenous base with a pyrimidine skeleton.
[ "GOC:hjd" ]
null
[ "1,3-diazine binding", "pyrimidine base binding", "pyrimidine binding" ]
[ "NARROW", "EXACT", "RELATED" ]
[]
[]
[]
[ "GO:0002054" ]
[]
[]
[]
[ "GO:0002054" ]
[]
[]
[]
[]
[]
[]
null
null
false
true
3
GO:0002062
2,062
chondrocyte differentiation
biological_process
The process in which a chondroblast acquires specialized structural and/or functional features of a chondrocyte. A chondrocyte is a polymorphic cell that forms cartilage.
[ "GOC:dph" ]
null
[]
[]
[]
[]
[]
[ "GO:0030154" ]
[ "part_of GO:0051216" ]
[ "part_of" ]
[ "GO:0051216" ]
[ "GO:0030154", "GO:0051216" ]
[]
[]
[]
[]
[]
[]
null
null
false
true
9
GO:0002064
2,064
epithelial cell development
biological_process
The process whose specific outcome is the progression of an epithelial cell over time, from its formation to the mature structure. An epithelial cell is a cell usually found in a two-dimensional sheet with a free surface.
[ "GOC:dph" ]
null
[]
[]
[]
[]
[]
[ "GO:0048468" ]
[ "part_of GO:0030855" ]
[ "part_of" ]
[ "GO:0030855" ]
[ "GO:0030855", "GO:0048468" ]
[]
[]
[]
[]
[]
[]
null
null
false
true
6
GO:0002065
2,065
columnar/cuboidal epithelial cell differentiation
biological_process
The process in which a relatively unspecialized cell acquires specialized features of a columnar/cuboidal epithelial cell. A columnar/cuboidal epithelial cell is a cell usually found in a two dimensional sheet with a free surface. Columnar/cuboidal epithelial cells take on the shape of a column or cube.
[ "GOC:dph" ]
null
[]
[]
[]
[]
[]
[ "GO:0030855" ]
[]
[]
[]
[ "GO:0030855" ]
[]
[]
[]
[]
[]
[]
null
null
false
true
6
GO:0002066
2,066
columnar/cuboidal epithelial cell development
biological_process
The process whose specific outcome is the progression of a columnar/cuboidal epithelial cell over time, from its formation to the mature structure. A columnar/cuboidal epithelial cell is a cell usually found in a two dimensional sheet with a free surface. Columnar/cuboidal epithelial cells take on the shape of a column...
[ "GOC:dph" ]
null
[]
[]
[]
[]
[]
[ "GO:0002064" ]
[ "part_of GO:0002065" ]
[ "part_of" ]
[ "GO:0002065" ]
[ "GO:0002064", "GO:0002065" ]
[]
[]
[]
[]
[]
[]
null
null
false
true
1
GO:0002067
2,067
glandular epithelial cell differentiation
biological_process
The process in which a relatively unspecialized cell acquires specialized features of a glandular epithelial cell. A glandular epithelial cell is a columnar/cuboidal epithelial cell found in a two dimensional sheet with a free surface exposed to the lumen of a gland.
[ "GOC:dph" ]
null
[]
[]
[]
[]
[]
[ "GO:0002065" ]
[]
[]
[]
[ "GO:0002065" ]
[]
[]
[]
[]
[]
[]
null
null
false
true
4
GO:0002068
2,068
glandular epithelial cell development
biological_process
The process whose specific outcome is the progression of a glandular epithelial cell over time, from its formation to the mature structure. A glandular epithelial cell is a columnar/cuboidal epithelial cell is a cell found in a two dimensional sheet with a free surface exposed to the lumen of a gland.
[ "GOC:dph" ]
null
[]
[]
[]
[]
[]
[ "GO:0002066" ]
[ "part_of GO:0002067" ]
[ "part_of" ]
[ "GO:0002067" ]
[ "GO:0002066", "GO:0002067" ]
[]
[]
[]
[]
[]
[]
null
null
false
true
6
GO:0002069
2,069
columnar/cuboidal epithelial cell maturation
biological_process
The developmental process, independent of morphogenetic (shape) change, that is required for a columna/cuboidal epithelial cell to attain its fully functional state. A columnar/cuboidal epithelial cell is a cell usually found in a two dimensional sheet with a free surface. Columnar/cuboidal epithelial cells take on the...
[ "GOC:dph" ]
null
[]
[]
[]
[]
[]
[ "GO:0002070" ]
[ "part_of GO:0002066" ]
[ "part_of" ]
[ "GO:0002066" ]
[ "GO:0002066", "GO:0002070" ]
[]
[]
[]
[]
[]
[]
null
null
false
true
1
GO:0002070
2,070
epithelial cell maturation
biological_process
The developmental process, independent of morphogenetic (shape) change, that is required for an epithelial cell to attain its fully functional state. An epithelial cell is a cell usually found in a two-dimensional sheet with a free surface.
[ "GOC:dph" ]
null
[]
[]
[]
[]
[]
[ "GO:0048469" ]
[ "part_of GO:0002064" ]
[ "part_of" ]
[ "GO:0002064" ]
[ "GO:0002064", "GO:0048469" ]
[]
[]
[]
[]
[]
[]
null
null
false
true
9
GO:0002071
2,071
glandular epithelial cell maturation
biological_process
The developmental process, independent of morphogenetic (shape) change, that is required for a glandular epithelial cell to attain its fully functional state. A glandular epithelial cell is a columnar/cuboidal epithelial cell is a cell found in a two dimensional sheet with a free surface exposed to the lumen of a gland...
[ "GOC:dph" ]
null
[]
[]
[]
[]
[]
[ "GO:0002069" ]
[ "part_of GO:0002068" ]
[ "part_of" ]
[ "GO:0002068" ]
[ "GO:0002068", "GO:0002069" ]
[]
[]
[]
[]
[]
[]
null
null
false
true
4
GO:0002072
2,072
optic cup morphogenesis involved in camera-type eye development
biological_process
The invagination of the optic vesicle to form two-walled indentations, the optic cups, that will go on to form the retina. This process begins with the optic vesicle becoming a two-walled structure and its subsequent shape changes. It does not include the fate commitment of cells to become the pigmented retina and the ...
[ "GOC:dph", "GOC:mtg_sensu", "GOC:sdb_2009", "GOC:tb", "ISBN:0878932437" ]
null
[ "optic cup morphogenesis involved in camera-style eye development" ]
[ "EXACT" ]
[]
[]
[]
[ "GO:0016331" ]
[ "part_of GO:0060900" ]
[ "part_of" ]
[ "GO:0060900" ]
[ "GO:0016331", "GO:0060900" ]
[]
[]
[]
[]
[]
[]
null
null
false
true
6
GO:0002074
2,074
extraocular skeletal muscle development
biological_process
The process whose specific outcome is the progression of the extraocular skeletal muscle over time, from its formation to the mature structure. The extraocular muscle is derived from cranial mesoderm and controls eye movements. The muscle begins its development with the differentiation of the muscle cells and ends with...
[ "GOC:dph", "GOC:mtg_muscle", "GOC:mtg_sensu", "MA:0001271", "PMID:16638982" ]
null
[]
[]
[]
[]
[]
[ "GO:0007519", "GO:0060538" ]
[ "part_of GO:0043010" ]
[ "part_of" ]
[ "GO:0043010" ]
[ "GO:0007519", "GO:0043010", "GO:0060538" ]
[]
[]
[]
[]
[]
[]
null
null
false
true
5
GO:0002075
2,075
somitomeric trunk muscle development
biological_process
The process whose specific outcome is the progression of the somitomeric trunk muscle over time, from its formation to the mature structure. The somitomeric trunk muscle is derived from somitomeric mesoderm. The muscle begins its development with the differentiation of the muscle cells and ends with the mature muscle. ...
[ "GOC:dph", "PMID:16638982" ]
null
[]
[]
[]
[]
[]
[ "GO:0060538" ]
[]
[]
[]
[ "GO:0060538" ]
[]
[]
[]
[]
[]
[]
null
null
false
true
3
GO:0002077
2,077
acrosome matrix dispersal
biological_process
The proteolytic digestion of components in the acrosomal matrix that occurs as part of the acrosome reaction. The process can occur either in the cumulus oophorous facilitating the penetration of it by the sperm, or at the zona pellucida allowing the sperm to reach the plasma membrane of the egg where the inner acrosom...
[ "GOC:dph", "PMID:3886029" ]
null
[]
[]
[]
[]
[]
[ "GO:0030163" ]
[ "part_of GO:0007340" ]
[ "part_of" ]
[ "GO:0007340" ]
[ "GO:0007340", "GO:0030163" ]
[]
[]
[]
[]
[]
[]
null
null
false
true
4
GO:0002078
2,078
membrane fusion involved in acrosome reaction
biological_process
The fusion of the plasma membrane of the sperm with the outer acrosomal membrane.
[ "GOC:dph", "PMID:3886029" ]
null
[ "membrane fusion involved in the acrosomal reaction" ]
[ "EXACT" ]
[]
[]
[]
[ "GO:0022412", "GO:0061025" ]
[ "part_of GO:0007340" ]
[ "part_of" ]
[ "GO:0007340" ]
[ "GO:0007340", "GO:0022412", "GO:0061025" ]
[ "GO:0061025", "part_of GO:0007340" ]
[]
[]
[]
[]
[]
null
null
false
true
3
GO:0002079
2,079
inner acrosomal membrane
cellular_component
The acrosomal membrane region that underlies the acrosomal vesicle and is located toward the sperm nucleus. This region is responsible for molecular interactions allowing the sperm to penetrate the zona pellucida and fuses with the egg plasma membrane.
[ "GOC:dph", "PMID:3899643", "PMID:8936405" ]
Note that this term is not a descendant of 'organelle inner membrane ; GO:0019866' because the outer acrosomal membrane is a portion of the acrosomal membrane; the latter is a single lipid bilayer.
[]
[]
[]
[]
[]
[ "GO:0030659" ]
[ "part_of GO:0002080" ]
[ "part_of" ]
[ "GO:0002080" ]
[ "GO:0002080", "GO:0030659" ]
[]
[]
[]
[]
[]
[]
null
null
false
true
1
GO:0002080
2,080
acrosomal membrane
cellular_component
The membrane that surrounds the acrosomal lumen. The acrosome is a special type of lysosome in the head of a spermatozoon that contains acid hydrolases and is concerned with the breakdown of the outer membrane of the ovum during fertilization.
[ "GOC:dph" ]
null
[]
[]
[]
[]
[]
[ "GO:0030667" ]
[ "part_of GO:0001669" ]
[ "part_of" ]
[ "GO:0001669" ]
[ "GO:0001669", "GO:0030667" ]
[]
[]
[]
[]
[]
[]
null
null
false
true
8
GO:0002081
2,081
outer acrosomal membrane
cellular_component
The acrosomal membrane region that underlies the plasma membrane of the sperm. This membrane fuses with the sperm plasma membrane as part of the acrosome reaction.
[ "GOC:dph", "PMID:8936405" ]
Note that this term is not a descendant of 'organelle outer membrane ; GO:0031968' because the outer acrosomal membrane is a portion of the acrosomal membrane; the latter is a single lipid bilayer.
[]
[]
[]
[]
[]
[ "GO:0030659" ]
[ "part_of GO:0002080" ]
[ "part_of" ]
[ "GO:0002080" ]
[ "GO:0002080", "GO:0030659" ]
[]
[]
[]
[]
[]
[]
null
null
false
true
6
GO:0002082
2,082
regulation of oxidative phosphorylation
biological_process
Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the phosphorylation of ADP to ATP that accompanies the oxidation of a metabolite through the operation of the respiratory chain. Oxidation of compounds establishes a proton gradient across the membrane, providin...
[ "GOC:dph" ]
null
[ "OXPHOS" ]
[ "EXACT" ]
[]
[]
[]
[ "GO:1903715" ]
[ "regulates GO:0006119" ]
[ "regulates" ]
[ "GO:0006119" ]
[ "GO:0006119", "GO:1903715" ]
[ "GO:0065007", "regulates GO:0006119" ]
[]
[]
[]
[]
[]
null
null
false
true
1
GO:0002083
2,083
obsolete 4-hydroxybenzoate decaprenyltransferase activity
molecular_function
OBSOLETE. Catalysis of the reaction: all-trans-decaprenyl diphosphate + 4-hydroxybenzoate = 3-decaprenyl-4-hydroxybenzoate + diphosphate.
[ "GOC:curators" ]
This term was obsoleted because it represents a specific substrate of 4-hydroxybenzoate polyprenyltransferase activity ; GO:0008412.
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[ "GO:0008412" ]
[]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/26830\" xsd:anyURI" ]
null
null
true
true
7
GO:0002084
2,084
protein depalmitoylation
biological_process
The removal of palymitoyl groups from a lipoprotein.
[ "GOC:hjd" ]
null
[]
[]
[]
[ "gocheck_obsoletion_candidate" ]
[]
[ "GO:0035601", "GO:0042159", "GO:0098734" ]
[]
[]
[]
[ "GO:0035601", "GO:0042159", "GO:0098734" ]
[]
[]
[]
[]
[]
[]
null
null
false
true
8
GO:0002085
2,085
inhibition of neuroepithelial cell differentiation
biological_process
Any process that prevents the activation of neuroepithelial cell differentiation. Neuroepithelial cell differentiation is the process in which epiblast cells acquire specialized features of neuroepithelial cells.
[ "GOC:dph", "PMID:16678814" ]
null
[ "negative regulation of neural plate formation", "repression of premature neural plate formation" ]
[ "NARROW", "NARROW" ]
[]
[]
[]
[ "GO:0022603", "GO:0030857", "GO:0045995", "GO:0048505" ]
[ "negatively_regulates GO:0060563" ]
[ "negatively_regulates" ]
[ "GO:0060563" ]
[ "GO:0022603", "GO:0030857", "GO:0045995", "GO:0048505", "GO:0060563" ]
[ "GO:0065007", "negatively_regulates GO:0060563" ]
[]
[]
[]
[]
[]
null
null
false
true
3
GO:0002086
2,086
diaphragm contraction
biological_process
A process in which force is generated within involuntary skeletal muscle tissue, resulting in a change in muscle geometry. This process occurs in the diaphragm. Force generation involves a chemo-mechanical energy conversion step that is carried out by the actin/myosin complex activity, which generates force through ATP...
[ "GOC:dph", "GOC:mtg_muscle", "PMID:12458206" ]
null
[]
[]
[]
[]
[]
[ "GO:0003011", "GO:0003016" ]
[]
[]
[]
[ "GO:0003011", "GO:0003016" ]
[]
[]
[]
[]
[]
[]
null
null
false
true
3
GO:0002087
2,087
regulation of respiratory gaseous exchange by nervous system process
biological_process
A process carried out by the nervous system that is required for the proper control of respiratory gaseous exchange. This process occurs in the respiratory center of the brain in vertebrates.
[ "GOC:dph", "GOC:tb", "PMID:12458206" ]
null
[ "neurological control of breathing", "regulation of respiratory gaseous exchange by neurological system process" ]
[ "EXACT", "EXACT" ]
[]
[]
[]
[ "GO:0044065", "GO:0050877" ]
[]
[]
[]
[ "GO:0044065", "GO:0050877" ]
[ "GO:0050877", "regulates GO:0007585" ]
[]
[]
[]
[]
[]
null
null
false
true
8
GO:0002088
2,088
lens development in camera-type eye
biological_process
The process whose specific outcome is the progression of the lens over time, from its formation to the mature structure. The lens is a transparent structure in the eye through which light is focused onto the retina. An example of this process is found in Mus musculus.
[ "GOC:dph", "ISBN:0582064333" ]
null
[ "lens development", "lens development in camera-style eye" ]
[ "EXACT", "EXACT" ]
[]
[]
[]
[ "GO:0048856" ]
[ "part_of GO:0043010" ]
[ "part_of" ]
[ "GO:0043010" ]
[ "GO:0043010", "GO:0048856" ]
[]
[]
[]
[]
[]
[]
null
null
false
true
1
GO:0002089
2,089
lens morphogenesis in camera-type eye
biological_process
The process in which the anatomical structures of the lens are generated and organized. The lens is a transparent structure in the eye through which light is focused onto the retina. An example of this process is found in Mus musculus.
[ "GOC:dph", "GOC:mtg_sensu" ]
null
[ "lens morphogenesis", "lens morphogenesis in camera-style eye" ]
[ "EXACT", "EXACT" ]
[]
[]
[]
[ "GO:0009653" ]
[ "part_of GO:0002088", "part_of GO:0048593" ]
[ "part_of", "part_of" ]
[ "GO:0002088", "GO:0048593" ]
[ "GO:0002088", "GO:0009653", "GO:0048593" ]
[]
[]
[]
[]
[]
[]
null
null
false
true
5
GO:0002091
2,091
negative regulation of receptor internalization
biological_process
Any process that stops, prevents, or reduces the frequency, rate or extent of receptor internalization.
[ "GOC:hjd" ]
null
[ "down regulation of receptor internalization", "down-regulation of receptor internalization", "downregulation of receptor internalization", "inhibition of receptor internalization" ]
[ "EXACT", "EXACT", "EXACT", "NARROW" ]
[]
[]
[]
[ "GO:0002090", "GO:0048261" ]
[ "negatively_regulates GO:0031623" ]
[ "negatively_regulates" ]
[ "GO:0031623" ]
[ "GO:0002090", "GO:0031623", "GO:0048261" ]
[ "GO:0065007", "negatively_regulates GO:0031623" ]
[]
[]
[]
[]
[]
null
null
false
true
6
GO:0002093
2,093
auditory receptor cell morphogenesis
biological_process
Any process that alters the size or shape of an auditory receptor cell.
[ "GOC:dph", "GOC:tb" ]
null
[ "hair cell morphogenesis" ]
[ "BROAD" ]
[]
[]
[]
[ "GO:0048598", "GO:0048667" ]
[ "part_of GO:0042472", "part_of GO:0060117" ]
[ "part_of", "part_of" ]
[ "GO:0042472", "GO:0060117" ]
[ "GO:0042472", "GO:0048598", "GO:0048667", "GO:0060117" ]
[]
[]
[]
[]
[]
[]
null
null
false
true
9
GO:0002094
2,094
obsolete polyprenyltransferase activity
molecular_function
OBSOLETE. Catalysis of the transfer of multiple prenyl groups from one compound (donor) to another (acceptor).
[ "GOC:hjd" ]
The reason for obsoletion is that this term was an unnecessary grouping term.
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[ "GO:0004659" ]
[]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/29428\" xsd:anyURI" ]
null
null
true
true
3
GO:0002095
2,095
caveolar macromolecular signaling complex
cellular_component
A complex composed of proteins required for beta adrenergic receptor activation of protein kinase A. It includes the Cav 12. subunit of L-type calcium channel, protein kinase A regulatory subunit 2(PKAR2), adenyl cyclase, beta-adrenergic receptor, G-alpha-S, protein phosphatase 2A (PP2A) and caveolin 3 (CAV3).
[ "PMID:16648270" ]
null
[ "caveolar macromolecular signalling complex" ]
[ "EXACT" ]
[]
[]
[]
[ "GO:0098797" ]
[ "part_of GO:0005901" ]
[ "part_of" ]
[ "GO:0005901" ]
[ "GO:0005901", "GO:0098797" ]
[]
[]
[]
[]
[]
[]
null
null
false
true
8
GO:0002096
2,096
polkadots
cellular_component
A punctate, filamentous structure composed of Bcl10 that appears in the cytoplasm of T-cells shortly after T-cell receptor stimulation. Polkadots stands for Punctate Oligomeric Killing and Activating DOmains Transducing Signals.
[ "PMID:14724296", "PMID:16495340" ]
Note that polkadots also contains some amount of MALT1. Interaction with MALT1 is required for formation of the polkadots.
[]
[]
[]
[]
[]
[ "GO:0032991" ]
[ "part_of GO:0005737" ]
[ "part_of" ]
[ "GO:0005737" ]
[ "GO:0005737", "GO:0032991" ]
[]
[]
[]
[]
[]
[]
null
null
false
true
5
GO:0002097
2,097
tRNA wobble base modification
biological_process
The process in which the nucleotide at position 34 in the anticodon of a tRNA is post-transcriptionally modified. The wobble nucleoside of the tRNA sequence (position 34) corresponds to the first position of the anticodon.
[ "PMID:28812932" ]
null
[]
[]
[]
[]
[]
[ "GO:0006400" ]
[]
[]
[]
[ "GO:0006400" ]
[]
[]
[]
[]
[]
[]
null
null
false
true
4
GO:0002098
2,098
tRNA wobble uridine modification
biological_process
The process in which a uridine at position 34 of a tRNA is post-transcriptionally modified. The wobble nucleoside of the tRNA sequence (position 34) corresponds to the first position of the anticodon.
[ "GOC:hjd", "ISBN:155581073X" ]
null
[]
[]
[]
[]
[]
[ "GO:0002097" ]
[]
[]
[]
[ "GO:0002097" ]
[]
[]
[]
[]
[]
[]
null
null
false
true
9
GO:0002099
2,099
tRNA wobble guanine modification
biological_process
The process in which a guanine at position 34 of a tRNA is post-transcriptionally modified. The wobble nucleoside of the tRNA sequence (position 34) corresponds to the first position of the anticodon.
[ "GOC:hjd", "PMID:39600051" ]
null
[]
[]
[]
[]
[]
[ "GO:0002097" ]
[]
[]
[]
[ "GO:0002097" ]
[]
[]
[]
[]
[]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/30774\" xsd:anyURI" ]
null
null
false
true
9
GO:0002100
2,100
tRNA wobble adenosine to inosine editing
biological_process
The process in which an adenosine at position 34 of a tRNA is post-transcriptionally converted to inosine. The wobble nucleoside of the tRNA sequence (position 34) corresponds to the first position of the anticodon.
[ "GOC:hjd", "ISBN:155581073X" ]
null
[]
[]
[]
[]
[]
[ "GO:0002097", "GO:0006382" ]
[]
[]
[]
[ "GO:0002097", "GO:0006382" ]
[]
[]
[]
[]
[]
[]
null
null
false
true
8
GO:0002101
2,101
tRNA wobble cytosine modification
biological_process
The process in which a cytosine at position 34 of a tRNA is post-transcriptionally modified. The wobble nucleoside of the tRNA sequence (position 34) corresponds to the first position of the anticodon.
[ "GOC:hjd", "ISBN:155581073X" ]
null
[]
[]
[]
[]
[]
[ "GO:0002097" ]
[]
[]
[]
[ "GO:0002097" ]
[]
[]
[]
[]
[]
[]
null
null
false
true
1
GO:0002102
2,102
podosome
cellular_component
An actin-rich adhesion structure characterized by formation upon cell substrate contact and localization at the substrate-attached part of the cell, contain an F-actin-rich core surrounded by a ring structure containing proteins such as vinculin and talin, and have a diameter of 0.5 mm.
[ "PMID:12837608", "PMID:15890982" ]
Note that podosomes can be distinguished from other F-actin-rich structures or from other matrix contacts. For example, focal adhesions and focal contacts do not display a core structure of F-actin. Unlike focal adhesions, podosome assembly does not require de novo protein synthesis. However, most of the podosome ring ...
[]
[]
[]
[]
[ "Wikipedia:Podosome" ]
[ "GO:0043232" ]
[ "part_of GO:0015629" ]
[ "part_of" ]
[ "GO:0015629" ]
[ "GO:0015629", "GO:0043232" ]
[]
[]
[]
[]
[]
[]
null
null
false
true
1
GO:0002103
2,103
endonucleolytic cleavage of tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA)
biological_process
Endonucleolytic cleavage of a pre-rRNA molecule originally produced as a tetracistronic rRNA transcript that contains the Small Subunit (SSU) rRNA, Large Subunit (LSU) the 4.5S rRNA, and the 5S rRNA in that order from 5' to 3' along the primary transcript. Primary ribosomal RNA transcripts with four genes, in this orde...
[ "GOC:curators" ]
null
[]
[]
[]
[]
[]
[ "GO:0006364" ]
[]
[]
[]
[ "GO:0006364" ]
[]
[]
[]
[]
[]
[]
null
null
false
true
7
GO:0002104
2,104
endonucleolytic cleaveage between 4.5S rRNA and 5S rRNA of tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA)
biological_process
Endonucleolytic cleavage between the 5S rRNA and the 4.5S rRNA of an rRNA molecule originally produced as a tetracistronic rRNA transcript that contains the Small Subunit (SSU) rRNA, Large Subunit (LSU) the 4.5S rRNA, and the 5S rRNA in that order from 5' to 3' along the primary transcript. Note that the use of the wor...
[ "GOC:curators" ]
null
[]
[]
[]
[]
[]
[ "GO:0002103" ]
[]
[]
[]
[ "GO:0002103" ]
[]
[]
[]
[]
[]
[]
null
null
false
true
2
GO:0002105
2,105
endonucleolytic cleaveage between LSU-rRNA and 4.5S rRNA of tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA)
biological_process
Endonucleolytic cleavage between the LSU-rRNA and the 4.5S rRNA of an rRNA molecule originally produced as a tetracistronic rRNA transcript that contains the Small Subunit (SSU) rRNA, Large Subunit (LSU) the 4.5S rRNA, and the 5S rRNA in that order from 5' to 3' along the primary transcript. Note that the use of the wo...
[ "GOC:curators" ]
null
[]
[]
[]
[]
[]
[ "GO:0002103" ]
[]
[]
[]
[ "GO:0002103" ]
[]
[]
[]
[]
[]
[]
null
null
false
true
1
GO:0002106
2,106
endonucleolytic cleaveage between SSU-rRNA and LSU-rRNA of tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA)
biological_process
Endonucleolytic cleavages between the SSU-rRNA and the LSU-rRNA of an rRNA molecule originally produced as a tetracistronic rRNA transcript that contains the Small Subunit (SSU) rRNA, Large Subunit (LSU) the 4.5S rRNA, and the 5S rRNA in that order from 5' to 3' along the primary transcript. These cleavages liberate tR...
[ "GOC:curators" ]
null
[]
[]
[]
[]
[]
[ "GO:0002103" ]
[]
[]
[]
[ "GO:0002103" ]
[]
[]
[]
[]
[]
[]
null
null
false
true
9
GO:0002107
2,107
generation of mature 3'-end of 5S rRNA generated by RNA polymerase III
biological_process
The removal of extra uridine residues from the 3' end of a 5S pre-rRNA generated by transcription by RNA polymerase III to generate the mature 3'-end.
[ "GOC:hjd", "PMID:16387655", "PMID:1748637", "PMID:1902221", "PMID:8389357" ]
null
[]
[]
[]
[]
[]
[ "GO:0000481", "GO:0031125" ]
[]
[]
[]
[ "GO:0000481", "GO:0031125" ]
[]
[]
[]
[]
[]
[]
null
null
false
true
2
GO:0002108
2,108
maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, LSU-rRNA,5S)
biological_process
Any process involved in the maturation of a precursor Large SubUnit (LSU) ribosomal RNA (rRNA) molecule into a mature LSU-rRNA molecule from the pre-rRNA molecule originally produced as a tricistronic rRNA transcript that contains the Small Subunit (SSU) rRNA, Large Subunit (LSU) the 5S rRNA in that order from 5' to 3'...
[ "GOC:curators" ]
null
[]
[]
[]
[]
[]
[ "GO:0000470" ]
[]
[]
[]
[ "GO:0000470" ]
[]
[]
[]
[]
[]
[]
null
null
false
true
2
GO:0002109
2,109
maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, LSU-rRNA,5S)
biological_process
Any process involved in the maturation of a precursor Small SubUnit (SSU) ribosomal RNA (rRNA) molecule into a mature SSU-rRNA molecule from the pre-rRNA molecule originally produced as a tricistronic rRNA transcript that contains the Small Subunit (SSU) rRNA, Large Subunit (LSU) the 5S rRNA in that order from 5' to 3'...
[ "GOC:curators" ]
null
[]
[]
[]
[]
[]
[ "GO:0030490" ]
[]
[]
[]
[ "GO:0030490" ]
[]
[]
[]
[]
[]
[]
null
null
false
true
2
GO:0002110
2,110
cotranscriptional mitochondrial rRNA nucleotide insertion
biological_process
The insertion of one or two non-coded nucleotides during the transcription of a mitochondrial rRNA. Such additions are known to occur in myxomycetes such as Physarum, Didymium, and Stemonitis.
[ "GOC:curators", "ISBN:1555811337", "PMID:8306965" ]
null
[]
[]
[]
[]
[]
[ "GO:0000154", "GO:0070705" ]
[]
[]
[]
[ "GO:0000154", "GO:0070705" ]
[]
[]
[]
[]
[]
[]
null
null
false
true
7
GO:0002111
2,111
BRCA2-BRAF35 complex
cellular_component
A heterodimeric complex of BRCA2 and BRAF35 (BRCA2-associated factor 35). The BRCA2-BRAF35 complex is often associated with condensed chromatin during mitosis.
[ "GOC:hjd", "PMID:11207365" ]
null
[]
[]
[]
[]
[]
[ "GO:0140513" ]
[]
[]
[]
[ "GO:0140513" ]
[]
[]
[]
[]
[]
[]
null
null
false
true
6
GO:0002112
2,112
interleukin-33 receptor binding
molecular_function
Binding to an interleukin-33 receptor.
[ "GOC:hjd" ]
null
[ "IL-33", "interleukin-33 receptor ligand" ]
[ "NARROW", "NARROW" ]
[]
[]
[]
[ "GO:0005126" ]
[]
[]
[]
[ "GO:0005126" ]
[]
[]
[]
[]
[]
[]
null
null
false
true
3
GO:0002113
2,113
interleukin-33 binding
molecular_function
Binding to interleukin-33.
[ "GOC:hjd" ]
null
[ "IL-33 binding" ]
[ "EXACT" ]
[]
[]
[]
[ "GO:0019955" ]
[]
[]
[]
[ "GO:0019955" ]
[]
[]
[]
[]
[]
[]
null
null
false
true
3
GO:0002114
2,114
interleukin-33 receptor activity
molecular_function
Combining with interleukin-33 and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.
[ "GOC:hjd", "GOC:signaling" ]
null
[ "IL-33 receptor activity", "IL-33R" ]
[ "EXACT", "EXACT" ]
[]
[]
[]
[ "GO:0004896" ]
[ "has_part GO:0002113", "part_of GO:0038172" ]
[ "has_part", "part_of" ]
[ "GO:0002113", "GO:0038172" ]
[ "GO:0002113", "GO:0004896", "GO:0038172" ]
[]
[]
[]
[]
[]
[]
null
null
false
true
3
GO:0002115
2,115
store-operated calcium entry
biological_process
A calcium ion entry mechanism in the plasma membrane activated by the depletion of calcium ion from the internal calcium ion store in the endoplasmic reticulum.
[ "GOC:hjd", "PMID:11120592", "PMID:17956991" ]
SOCE is initiated by response to stiumlation of membrane receptors leading to the hydrolysis ofphosphatidylinositol bisphosphate (PIP2), inositol 1,4,5-trisphosphate (IP3) generation, and IP3-mediated calcium ion release from the endoplasmic reticulum.
[ "calcium ion import", "capacitative calcium entry", "SOCE", "store-operated calcium import" ]
[ "BROAD", "EXACT", "EXACT", "EXACT" ]
[]
[]
[]
[ "GO:0006816" ]
[]
[]
[]
[ "GO:0006816" ]
[]
[]
[]
[]
[]
[]
null
null
false
true
4
GO:0002116
2,116
semaphorin receptor complex
cellular_component
A stable binary complex of a semaphorin and a plexin, together forming a functional semaphorin receptor.
[ "GOC:hjd", "PMID:10934324", "PMID:12367632", "PMID:12613544" ]
null
[ "plexin-neurophilin complex" ]
[ "EXACT" ]
[]
[]
[]
[ "GO:0043235" ]
[]
[]
[]
[ "GO:0043235" ]
[]
[]
[]
[]
[]
[]
null
null
false
true
4
GO:0002117
2,117
amphibian larval development
biological_process
The process whose specific outcome is the progression of the amphibian larva over time, from its formation to the mature structure. Amphibian larvae, sometimes called pollywogs or tadpoles, hatch from eggs and begin to grow limbs and other adult physical features at various times, depending on the species, before they ...
[ "GOC:bf", "PMID:27143402" ]
null
[]
[]
[]
[]
[]
[ "GO:0002164" ]
[]
[]
[]
[ "GO:0002164" ]
[]
[]
[]
[]
[]
[]
null
null
false
true
7
GO:0002119
2,119
nematode larval development
biological_process
The process whose specific outcome is the progression of the nematode larva over time, from its formation to the mature structure. Nematode larval development begins with the newly hatched first-stage larva (L1) and ends with the end of the last larval stage (for example the fourth larval stage (L4) in C. elegans). Eac...
[ "GOC:ems", "GOC:kmv" ]
null
[]
[]
[]
[]
[]
[ "GO:0002164" ]
[]
[]
[]
[ "GO:0002164" ]
[]
[]
[]
[]
[]
[]
null
null
false
true
4
GO:0002120
2,120
obsolete predatory behavior
biological_process
OBSOLETE. Aggressive behavior involving attack on prey by a predator.
[ "GOC:hjd" ]
This term was obsoleted because it is outside the scope of GO.
[ "predatory aggression", "predatory aggressive behavior" ]
[ "EXACT", "EXACT" ]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/18568\" xsd:anyURI" ]
null
null
true
true
9
GO:0002121
2,121
inter-male aggressive behavior
biological_process
Aggressive behavior based on competition between males of the same species over access to resources such as females, dominance, status, etc. and characterized by noise, threats, and is often less injurious.
[ "GOC:hjd" ]
null
[ "inter-male aggression" ]
[ "EXACT" ]
[]
[]
[]
[ "GO:0002118" ]
[]
[]
[]
[ "GO:0002118" ]
[]
[]
[]
[]
[]
[]
null
null
false
true
7
GO:0002122
2,122
fear-induced aggressive behavior
biological_process
Aggressive behavior associated with attempts to flee from a threat.
[ "GOC:hjd" ]
null
[ "fear-induced aggression" ]
[ "EXACT" ]
[]
[]
[]
[ "GO:0002118" ]
[]
[]
[]
[ "GO:0002118" ]
[]
[]
[]
[]
[]
[]
null
null
false
true
2
GO:0002123
2,123
irritable aggressive behavior
biological_process
Aggressive behavior induced by frustration and directed against an available target.
[ "GOC:hjd" ]
null
[ "irritable aggression" ]
[ "EXACT" ]
[]
[]
[]
[ "GO:0002118" ]
[]
[]
[]
[ "GO:0002118" ]
[]
[]
[]
[]
[]
[]
null
null
false
true
1
GO:0002124
2,124
territorial aggressive behavior
biological_process
Aggressive behavior performed in defence of a fixed area against intruders, typically conspecifics.
[ "GOC:hjd" ]
null
[ "territorial aggression" ]
[ "EXACT" ]
[]
[]
[]
[ "GO:0002118" ]
[]
[]
[]
[ "GO:0002118" ]
[]
[]
[]
[]
[]
[]
null
null
false
true
9
GO:0002125
2,125
maternal aggressive behavior
biological_process
Aggressive behavior of a female to protect her offspring from a threat.
[ "GOC:hjd" ]
Paternal aggression also exists. Serves to protect the offspring from intruders.
[ "maternal aggression" ]
[ "EXACT" ]
[]
[]
[]
[ "GO:0002118" ]
[]
[]
[]
[ "GO:0002118" ]
[]
[]
[]
[]
[]
[]
null
null
false
true
9
GO:0002126
2,126
instrumental aggressive behavior
biological_process
Aggressive behavior directed towards obtaining some goal, considered to be a learned response to a situation.
[ "GOC:hjd" ]
null
[ "instrumental aggression" ]
[ "EXACT" ]
[]
[]
[]
[ "GO:0002118" ]
[]
[]
[]
[ "GO:0002118" ]
[]
[]
[]
[]
[]
[]
null
null
false
true
4
GO:0002127
2,127
tRNA wobble base cytosine methylation
biological_process
The process in which the base of cytosine at position 34 in the anticodon of a tRNA is post-transcriptionally methylated at the C5 position.
[ "GOC:hjd", "ISBN:155581073X" ]
null
[ "wobble position m5C biosynthesis" ]
[ "EXACT" ]
[]
[]
[]
[ "GO:0002101", "GO:0002946" ]
[]
[]
[]
[ "GO:0002101", "GO:0002946" ]
[]
[]
[]
[]
[]
[]
null
null
false
true
6
GO:0002128
2,128
tRNA nucleoside ribose methylation
biological_process
The process that results in the modification of the sugar of a nucleoside in tRNA at the 2'O position.
[ "GOC:hjd", "ISBN:155581073X" ]
null
[]
[]
[]
[]
[]
[ "GO:0030488" ]
[]
[]
[]
[ "GO:0030488" ]
[]
[]
[]
[]
[]
[]
null
null
false
true
8
GO:0002129
2,129
wobble position guanine ribose methylation
biological_process
The process in which the ribose of guanosine at position 34 in the anticodon of a tRNA is post-transcriptionally methylated at the 2'-O position.
[ "GOC:hjd", "ISBN:155581073X" ]
null
[]
[]
[]
[]
[]
[ "GO:0002130", "GO:0002938" ]
[]
[]
[]
[ "GO:0002130", "GO:0002938" ]
[]
[]
[]
[]
[]
[]
null
null
false
true
1
GO:0002130
2,130
wobble position ribose methylation
biological_process
The process in which the ribose base of the nucleotide at position 34 in the anticodon of a tRNA is post-transcriptionally methylated at the 2'O position.
[ "GOC:hjd", "ISBN:155581073X" ]
null
[]
[]
[]
[]
[]
[ "GO:0002128" ]
[]
[]
[]
[ "GO:0002128" ]
[]
[]
[]
[]
[]
[]
null
null
false
true
6
GO:0002131
2,131
wobble position cytosine ribose methylation
biological_process
The process in which the ribose of cytidine at position 34 in the anticodon of a tRNA is post-transcriptionally methylated at the 2'-O position.
[ "GOC:hjd", "ISBN:155581073X" ]
null
[]
[]
[]
[]
[]
[ "GO:0002130" ]
[]
[]
[]
[ "GO:0002130" ]
[]
[]
[]
[]
[]
[]
null
null
false
true
7
GO:0002132
2,132
wobble position uridine ribose methylation
biological_process
The process in which the ribose of uridine at position 34 in the anticodon of a tRNA is post-transcriptionally methylated at the 2'-O position.
[ "GOC:hjd", "ISBN:155581073X" ]
null
[]
[]
[]
[]
[]
[ "GO:0002130" ]
[]
[]
[]
[ "GO:0002130" ]
[]
[]
[]
[]
[]
[]
null
null
false
true
4
GO:0002133
2,133
polycystin complex
cellular_component
A stable heterodimeric complex composed of polycystin-1 and polycystin-2.
[ "GOC:hjd", "PMID:11901144" ]
Different forms of the complex differing in type of N-glycosylation of polycystin-1 can exist (endoglycosidase sensitive and endoglycosidase resistant).
[]
[]
[]
[]
[]
[ "GO:0032991" ]
[]
[]
[]
[ "GO:0032991" ]
[]
[]
[]
[]
[]
[]
null
null
false
true
2
GO:0002134
2,134
UTP binding
molecular_function
Binding to UTP, uridine 5'-triphosphate.
[ "GOC:hjd", "ISBN:0198506732" ]
null
[]
[]
[]
[]
[]
[ "GO:0032557", "GO:0043168" ]
[]
[]
[]
[ "GO:0032557", "GO:0043168" ]
[]
[]
[]
[]
[]
[]
null
null
false
true
6
GO:0002135
2,135
CTP binding
molecular_function
Binding to CTP, cytidine 5'-triphosphate.
[ "GOC:hjd", "ISBN:0124020607" ]
null
[]
[]
[]
[]
[]
[ "GO:0032557", "GO:0043168" ]
[]
[]
[]
[ "GO:0032557", "GO:0043168" ]
[]
[]
[]
[]
[]
[]
null
null
false
true
1
GO:0002136
2,136
tRNA wobble base lysidine biosynthesis
biological_process
The process in which the carbonyl of cytosine at position 34 of a tRNA is post-transcriptionally replaced by lysine.
[ "PMID:15894617" ]
Exclusively located at the anticodon wobble position (i.e., position 34) of eubacterial and some organellar tRNAIle2. This modification converts the codon specificity from AUG to AUA, and it also converts the aminoacylation specificity of the tRNA from methionine to isoleucine. Requires ATP.
[]
[]
[]
[]
[]
[ "GO:0002101" ]
[]
[]
[]
[ "GO:0002101" ]
[]
[]
[]
[]
[]
[]
null
null
false
true
8
GO:0002138
2,138
retinoic acid biosynthetic process
biological_process
The chemical reactions and pathways resulting in the biosynthesis of retinoic acid, one of the three components that makes up vitamin A.
[ "GOC:hjd" ]
null
[ "retinoic acid anabolic process", "retinoic acid biosynthesis" ]
[ "EXACT", "EXACT" ]
[]
[]
[]
[ "GO:0016102", "GO:0042573", "GO:0072330" ]
[]
[]
[]
[ "GO:0016102", "GO:0042573", "GO:0072330" ]
[]
[]
[]
[]
[]
[]
hjd
2009-05-01T10:53:24Z
false
true
2
GO:0002139
2,139
stereocilia coupling link
cellular_component
A structure involved in coupling stereocilia to one another in sensory hair cells There are four morphologically distinct types: tip links, horizontal top connectors, shaft connectors and ankle links. Tip links and horizontal top connectors are the only inter-stereocilia links associated with mature cochlea, whereas an...
[ "PMID:16775142" ]
null
[]
[]
[]
[]
[]
[ "GO:0110165" ]
[ "part_of GO:0032421" ]
[ "part_of" ]
[ "GO:0032421" ]
[ "GO:0032421", "GO:0110165" ]
[]
[]
[]
[]
[]
[]
hjd
2009-05-06T10:25:38Z
false
true
7
GO:0002141
2,141
stereocilia ankle link
cellular_component
A stereocilia coupling link that is composed of a fine filament present in developing stereocilia that couples the bases of individual stereocilia to one another. They are not present in mature stereocilia.
[ "PMID:17567809" ]
null
[]
[]
[]
[]
[]
[ "GO:0002139" ]
[]
[]
[]
[ "GO:0002139" ]
[]
[]
[]
[]
[]
[]
hjd
2009-05-06T10:31:56Z
false
true
2
GO:0002142
2,142
stereocilia ankle link complex
cellular_component
A complex of proteins that connect growing stereocilia in developing cochlear hair cells, composed of Vlgr1, usherin, vezatin, and whirlin.
[ "PMID:16775142" ]
null
[]
[]
[]
[]
[]
[ "GO:0032991" ]
[ "part_of GO:0002141" ]
[ "part_of" ]
[ "GO:0002141" ]
[ "GO:0002141", "GO:0032991" ]
[]
[]
[]
[]
[]
[]
hjd
2009-05-06T10:33:57Z
false
true
8
GO:0002143
2,143
tRNA wobble position uridine thiolation
biological_process
The process in which a uridine residue at position 34 in the anticodon of a tRNA is post-transcriptionally thiolated at the C2 position. This process involves transfer of a sulfur from cysteine to position C2 by several steps.
[ "PMID:16871210" ]
In E. coli, the first step of the reaction is reductive elimination of sulfur from L-cysteine by IscS cysteine desulfurase to form an enzyme-bound cysteine-persulfide intermediate. Then, five essential gene products, TusA, TusB, TusC, TusD and TusE, mediate a sulfur relay that delivers the terminal sulfur of persulfide...
[ "tRNA wobble uridine thiolation", "wobble position s2U biosynthesis" ]
[ "EXACT", "EXACT" ]
[]
[]
[]
[ "GO:0002098", "GO:0034227" ]
[]
[]
[]
[ "GO:0002098", "GO:0034227" ]
[]
[]
[]
[]
[]
[]
hjd
2009-05-06T05:05:40Z
false
true
9
GO:0002144
2,144
cytosolic tRNA wobble base thiouridylase complex
cellular_component
A complex of two proteins involved in the thiolation of uridine 34 (U34) of tRNAs decoding two-family box triplets.
[ "PMID:17062623", "PMID:18391219" ]
null
[ "Ctu1-Ctu2 complex", "tRNA thiouridylase" ]
[ "NARROW", "BROAD" ]
[]
[]
[]
[ "GO:0140535", "GO:1990228" ]
[]
[]
[]
[ "GO:0140535", "GO:1990228" ]
[]
[]
[]
[]
[]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/27929\" xsd:anyURI" ]
hjd
2009-05-08T02:32:55Z
false
true
2
GO:0002145
2,145
4-amino-5-hydroxymethyl-2-methylpyrimidine diphosphatase activity
molecular_function
Catalysis of the reaction: 4-amino-5-hydroxymethyl-2-methylpyrimidine pyrophosphate + H2O = hydroxymethylpyrimidine phosphate + phosphate + H+.
[ "MetaCyc:RXN0-3543" ]
null
[ "HMP-PP diphosphatase", "HMP-PP pyrophosphatase" ]
[ "EXACT", "EXACT" ]
[]
[]
[ "MetaCyc:RXN0-3543", "RHEA:27914" ]
[ "GO:0016462" ]
[]
[]
[]
[ "GO:0016462" ]
[]
[]
[]
[]
[]
[ "skos:exactMatch RHEA:27914", "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/30193\" xsd:anyURI" ]
hjd
2009-06-10T11:21:35Z
false
true
8
GO:0002146
2,146
obsolete steroid hormone receptor import into nucleus
biological_process
OBSOLETE. The directed movement of a steroid hormone receptor into the nucleus.
[ "GOC:hjd" ]
The reason for obsoletion is that all proteins are imported into the nucleus via the same mechanism, so the import of individual proteins should be captured with extensions or by GO-CAM models.
[ "steroid hormone receptor nuclear translocation" ]
[ "NARROW" ]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[ "GO:0006606", "GO:0042306" ]
[]
hjd
2009-07-09T02:34:42Z
true
true
9
GO:0002147
2,147
obsolete glucocorticoid receptor import into nucleus
biological_process
OBSOLETE. The directed movement of a glucocorticoid receptor into the nucleus.
[ "GOC:hjd" ]
The reason for obsoletion is that all proteins are imported into the nucleus via the same mechanism, so the import of individual proteins should be captured with extensions or by GO-CAM models.
[ "glucocorticoid receptor nuclear translocation" ]
[ "NARROW" ]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[ "GO:0042306" ]
[]
hjd
2009-07-09T02:36:09Z
true
true
9
GO:0002148
2,148
obsolete hypochlorous acid metabolic process
biological_process
OBSOLETE. The chemical reactions and pathways involving hypochlorous acid.
[ "GOC:add", "PMID:10085024", "PMID:176150" ]
This term was obsoleted because it is an unnecessary grouping class.
[ "HClO metabolic process", "HOCl metabolic process", "hypochlorite metabolic process", "hypochlorous acid metabolism" ]
[ "EXACT", "EXACT", "RELATED", "EXACT" ]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/30524\" xsd:anyURI" ]
hjd
2009-10-13T10:27:48Z
true
true
1
GO:0002149
2,149
hypochlorous acid biosynthetic process
biological_process
The chemical reactions and pathways resulting in the formation of hypochlorous acid.
[ "GOC:add", "PMID:10085024", "PMID:176150" ]
Note that this reaction is catalyzed by myeloperoxidase in neutrophils.
[ "HClO biosynthetic process", "HOCl biosynthetic process", "hypochlorite biosynthetic process", "hypochlorous acid biosynthesis" ]
[ "EXACT", "EXACT", "RELATED", "EXACT" ]
[]
[]
[]
[ "GO:0043436", "GO:0044283", "GO:1903409" ]
[]
[]
[]
[ "GO:0043436", "GO:0044283", "GO:1903409" ]
[]
[]
[]
[]
[]
[]
hjd
2009-10-13T10:32:35Z
false
true
3
GO:0002150
2,150
hypochlorous acid catabolic process
biological_process
The chemical reactions and pathways resulting in the breakdown of hypochlorous acid.
[ "GOC:add" ]
null
[ "HClO catabolic process", "HOCl catabolic process", "hypochlorite catabolic process", "hypochlorous acid catabolism" ]
[ "EXACT", "EXACT", "RELATED", "EXACT" ]
[]
[]
[]
[ "GO:0043436", "GO:0044282", "GO:0072593" ]
[]
[]
[]
[ "GO:0043436", "GO:0044282", "GO:0072593" ]
[]
[]
[]
[]
[]
[]
hjd
2009-10-13T10:36:09Z
false
true
6
GO:0002151
2,151
G-quadruplex RNA binding
molecular_function
Binding to a G-quadruplex RNA structure, in which groups of four guanines adopt a flat, cyclic hydrogen-bonding arrangement known as a guanine tetrad.
[ "PMID:18294969", "PMID:18568163", "PMID:19330720" ]
The structures of RNA and DNA G quartets differ regarding sugar conformation so that a protein binding to the RNA structure might not bind to the DNA structure.
[ "G quadruplex binding", "G quartet binding", "G quartet RNA binding", "G-quartet binding" ]
[ "EXACT", "BROAD", "EXACT", "BROAD" ]
[]
[]
[ "Reactome:R-HSA-9836998 \"GRSF1 unwinds quadruplex G regions in RNA\"" ]
[ "GO:0003723" ]
[]
[]
[]
[ "GO:0003723" ]
[]
[]
[]
[]
[]
[]
hjd
2009-10-22T01:38:02Z
false
true
3
GO:0002152
2,152
bile acid conjugation
biological_process
The process in which bile acids are covalently linked to taurine or glycine.
[ "PMID:1094911", "PMID:708413" ]
The bile acid is first activated using CoA by cholate-CoA ligase activity(GO:0047747), then conjugated to taurine or glycine by glycine N-choloyltransferase activity (GO:0047963; appears to use either glycine or taurine).
[]
[]
[]
[]
[]
[ "GO:0008206" ]
[]
[]
[]
[ "GO:0008206" ]
[]
[]
[]
[]
[]
[]
hjd
2009-10-29T01:41:51Z
false
true
8
GO:0002153
2,153
steroid receptor RNA activator RNA binding
molecular_function
Binding to a steroid receptor RNA activator RNA (SRA). SRA enhances steroid hormone receptor transcriptional activity as an RNA transcript by an indirect mechanism that does not involve SRA-steroid receptor binding.
[ "GOC:vw", "PMID:10199399", "PMID:15180993" ]
Note: there is also evidence that the RNA itself may code a protein (solution structure of mouse steroid receptor RNA activator 1 (SRA1) protein submitted to PDB by Riken).
[ "SRA binding" ]
[ "EXACT" ]
[]
[]
[]
[ "GO:0003727" ]
[]
[]
[]
[ "GO:0003727" ]
[]
[]
[]
[]
[]
[]
hjd
2009-11-16T02:18:55Z
false
true
7
GO:0002154
2,154
thyroid hormone receptor signaling pathway
biological_process
A nuclear receptor-mediated signaling pathway initiated by a thyroid hormone binding to an intracellular receptor of the nuclear receptor protein family, and ending with regulation of a downstream cellular process, e.g. transcription.
[ "GOC:hjd" ]
null
[ "thyroid hormone mediated signalling pathway" ]
[ "EXACT" ]
[]
[]
[]
[ "GO:0009755", "GO:0141193" ]
[]
[]
[]
[ "GO:0009755", "GO:0141193" ]
[]
[]
[]
[]
[]
[]
hjd
2009-11-19T12:36:29Z
false
true
7
GO:0002156
2,156
negative regulation of thyroid hormone receptor signaling pathway
biological_process
Any process that stops, prevents, or reduces the frequency, rate or extent of thyroid hormone mediated signaling pathway.
[ "GOC:hjd" ]
null
[ "negative regulation of thyroid hormone mediated signaling pathway", "negative regulation of thyroid hormone mediated signalling pathway" ]
[ "EXACT", "EXACT" ]
[]
[]
[]
[ "GO:0002155", "GO:1902532" ]
[ "negatively_regulates GO:0002154" ]
[ "negatively_regulates" ]
[ "GO:0002154" ]
[ "GO:0002154", "GO:0002155", "GO:1902532" ]
[ "GO:0065007", "negatively_regulates GO:0002154" ]
[]
[]
[]
[]
[]
hjd
2009-11-19T12:41:48Z
false
true
7
GO:0002158
2,158
osteoclast proliferation
biological_process
The multiplication or reproduction of osteoclasts, resulting in the expansion of an osteoclast cell population. An osteoclast is a specialized phagocytic cell associated with the absorption and removal of the mineralized matrix of bone tissue, which typically differentiates from monocytes.
[ "CL:0000092", "GOC:hjd" ]
null
[]
[]
[]
[]
[]
[ "GO:0070661" ]
[]
[]
[]
[ "GO:0070661" ]
[]
[]
[]
[]
[]
[]
hjd
2010-02-03T01:50:37Z
false
true
7
GO:0002160
2,160
desmosome maintenance
biological_process
The maintenance of a desmosome. A desmosome is a patch-like intercellular junctions found in vertebrate tissues, consisting of parallel zones of two cell membranes, separated by an interspace of 25-35 nm, and having dense fibrillar plaques in the subjacent cytoplasm.
[ "GOC:hjd", "ISBN:0198506732" ]
Desmosomes link two cells together; hemidesmosomes attach one cell to the extracellular matrix.
[]
[]
[]
[]
[]
[ "GO:0002934", "GO:0045217" ]
[]
[]
[]
[ "GO:0002934", "GO:0045217" ]
[]
[]
[]
[]
[]
[]
hjd
2010-02-09T10:50:59Z
false
true
8
GO:0002161
2,161
aminoacyl-tRNA deacylase activity
molecular_function
The hydrolysis of an incorrectly aminoacylated tRNA.
[ "GOC:hjd", "PMID:14663147", "PMID:16087889" ]
null
[ "amino acid proofreading activity", "aminoacyl-tRNA editing activity", "aminoacyl-tRNA hydrolysis activity" ]
[ "RELATED", "EXACT", "RELATED" ]
[]
[]
[]
[ "GO:0052689", "GO:0140101", "GO:0160215" ]
[ "part_of GO:0106074" ]
[ "part_of" ]
[ "GO:0106074" ]
[ "GO:0052689", "GO:0106074", "GO:0140101", "GO:0160215" ]
[]
[]
[]
[]
[]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/29746\" xsd:anyURI" ]
hjd
2010-02-12T03:06:56Z
false
true
3
GO:0002162
2,162
dystroglycan binding
molecular_function
Binding to dystroglycan, a glycoprotein found in non-muscle tissues as well as in muscle tissues, often in association with dystrophin. The native dystroglycan cleaved into two non-covalently associated subunits, alpha (N-terminal) and beta (C-terminal).
[ "GOC:hjd" ]
null
[ "alpha-dystroglycan binding", "beta-dystroglycan binding" ]
[ "NARROW", "NARROW" ]
[ "GO:0002163", "GO:0002166" ]
[]
[]
[ "GO:0005515" ]
[]
[]
[]
[ "GO:0005515" ]
[]
[]
[]
[]
[]
[]
hjd
2010-02-22T02:17:58Z
false
true
4
GO:0002164
2,164
larval development
biological_process
The process whose specific outcome is the progression of the larva over time, from its formation to the mature structure. The larva is the early, immature form of an that at birth or hatching is fundamentally unlike its parent and must metamorphose before assuming the adult characters.
[ "GOC:jid", "ISBN:0877795088" ]
null
[]
[]
[]
[]
[]
[ "GO:0007275", "GO:0009791" ]
[]
[]
[]
[ "GO:0007275", "GO:0009791" ]
[]
[]
[]
[]
[]
[]
null
null
false
true
2
GO:0002165
2,165
instar larval or pupal development
biological_process
The process whose specific outcome is the progression of the instar larva or pupa over time, from its formation to the mature structure. An example of this process is found in Drosophila melanogaster.
[ "GOC:jid", "GOC:mtg_sensu" ]
null
[]
[]
[]
[]
[]
[ "GO:0007275", "GO:0009791" ]
[]
[]
[]
[ "GO:0007275", "GO:0009791" ]
[]
[]
[]
[]
[]
[]
null
null
false
true
9