go_id string | go_numeric_id int64 | name string | namespace string | definition string | definition_xrefs list | comment string | synonyms list | synonym_scopes list | alt_ids list | subsets list | xrefs list | is_a_ids list | relationship_edges list | relationship_types list | relationship_target_ids list | parent_ids list | intersection_of list | union_of list | disjoint_from list | replaced_by list | consider list | property_values list | created_by string | creation_date string | is_obsolete bool | in_go_basic bool | split_bucket int64 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
GO:0005461 | 5,461 | UDP-glucuronate transmembrane transporter activity | molecular_function | Enables the transfer of a UDP-glucuronic acid from one side of a membrane to the other. UDP-glucuronic acid is a substance composed of glucuronic acid in glycosidic linkage with uridine diphosphate. | [
"GOC:ai",
"GOC:mtg_transport",
"ISBN:0815340729"
] | null | [
"UDP-glucuronic acid transmembrane transporter activity"
] | [
"EXACT"
] | [] | [] | [
"Reactome:R-HSA-174368 \"SLC35D1 hexamer transports UDP-GlcA, UDP-GlcNAc from cytosol to endoplasmic reticulum lumen\"",
"Reactome:R-HSA-5603297 \"Defective SLC35D1 does not transport UDP-GlcA, UDPGlcNAc\"",
"Reactome:R-HSA-9912889 \"SLC35D2 exchanges UDP-GlcA for UMP\""
] | [
"GO:0015165",
"GO:0046943"
] | [
"part_of GO:0015787"
] | [
"part_of"
] | [
"GO:0015787"
] | [
"GO:0015165",
"GO:0015787",
"GO:0046943"
] | [] | [] | [] | [] | [] | [
"term_tracker_item \"https://github.com/geneontology/go-ontology/issues/29382\" xsd:anyURI"
] | null | null | false | true | 9 |
GO:0005462 | 5,462 | UDP-N-acetylglucosamine transmembrane transporter activity | molecular_function | Enables the transfer of a UDP-N-acetylglucosamine from one side of a membrane to the other. N-acetylglucosamine is a substance composed of N-acetylglucosamine, a common structural unit of oligosaccharides, in glycosidic linkage with uridine diphosphate. | [
"GOC:ai",
"GOC:mtg_transport",
"ISBN:0815340729"
] | null | [] | [] | [] | [] | [
"Reactome:R-HSA-5653622 \"Defective SLC35A3 does not exchange UDP-GlcNAc for UMP\"",
"Reactome:R-HSA-741450 \"SLC35A3 exchanges UDP-GlcNAc for UMP\"",
"Reactome:R-HSA-742354 \"SLC35B4 mediates the transport of UDP-N-acetylglucosamine into the Golgi lumen\""
] | [
"GO:0015165"
] | [
"part_of GO:1990569"
] | [
"part_of"
] | [
"GO:1990569"
] | [
"GO:0015165",
"GO:1990569"
] | [] | [] | [] | [] | [] | [] | null | null | false | true | 8 |
GO:0005463 | 5,463 | UDP-N-acetylgalactosamine transmembrane transporter activity | molecular_function | Enables the transfer of a N-acetylgalactosamine from one side of a membrane to the other. N-acetylgalactosamine is a substance composed of N-acetylgalactosamine, a common structural unit of oligosaccharides, in glycosidic linkage with uridine diphosphate. | [
"GOC:ai",
"GOC:mtg_transport",
"ISBN:0815340729"
] | null | [] | [] | [] | [] | [] | [
"GO:0015165"
] | [
"part_of GO:0015789"
] | [
"part_of"
] | [
"GO:0015789"
] | [
"GO:0015165",
"GO:0015789"
] | [] | [] | [] | [] | [] | [] | null | null | false | true | 7 |
GO:0005464 | 5,464 | UDP-xylose transmembrane transporter activity | molecular_function | Enables the transfer of UDP-xylose from one side of a membrane to the other. UDP-xylose is a substance composed of xylose in glycosidic linkage with uridine diphosphate. | [
"GOC:ai"
] | null | [] | [] | [] | [] | [
"Reactome:R-HSA-742373 \"SLC35B4 mediates the transport of UDP-xylose into the Golgi lumen\""
] | [
"GO:0015165"
] | [
"part_of GO:0015790"
] | [
"part_of"
] | [
"GO:0015790"
] | [
"GO:0015165",
"GO:0015790"
] | [] | [] | [] | [] | [] | [] | null | null | false | true | 3 |
GO:0005468 | 5,468 | obsolete small-molecule carrier or transporter | molecular_function | OBSOLETE. (Was not defined before being made obsolete). | [
"GOC:curators"
] | This term was made obsolete because it does not provide a useful functional classification. | [
"small-molecule carrier or transporter"
] | [
"EXACT"
] | [
"GO:0005453",
"GO:0005454"
] | [] | [] | [] | [] | [] | [] | [] | [] | [] | [] | [] | [
"GO:0005215"
] | [] | null | null | true | true | 4 |
GO:0005469 | 5,469 | succinate:fumarate antiporter activity | molecular_function | Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: succinate(out) + fumarate(in) = succinate(in) + fumarate(out). | [
"TC:2.A.29.13.1"
] | null | [] | [] | [] | [] | [
"RHEA:29323"
] | [
"GO:0015138",
"GO:0015141",
"GO:0015297"
] | [] | [] | [] | [
"GO:0015138",
"GO:0015141",
"GO:0015297"
] | [] | [] | [] | [] | [] | [
"skos:exactMatch RHEA:29323",
"term_tracker_item \"https://github.com/geneontology/go-ontology/issues/27278\" xsd:anyURI",
"term_tracker_item \"https://github.com/geneontology/go-ontology/issues/30193\" xsd:anyURI"
] | null | null | false | true | 8 |
GO:0005471 | 5,471 | ATP:ADP antiporter activity | molecular_function | Catalysis of the reaction: ATP(out) + ADP(in) = ATP(in) + ADP(out). | [
"TC:2.A.29.1.1"
] | null | [
"adenine nucleotide translocase",
"ADP/ATP carrier protein",
"ADP/ATP translocase",
"ATP/ADP exchange",
"ATP/ADP exchanger"
] | [
"EXACT",
"EXACT",
"EXACT",
"EXACT",
"EXACT"
] | [
"GO:0005349"
] | [] | [
"RHEA:34999"
] | [
"GO:0005347",
"GO:0015217",
"GO:0015297"
] | [] | [] | [] | [
"GO:0005347",
"GO:0015217",
"GO:0015297"
] | [] | [] | [] | [] | [] | [
"skos:exactMatch RHEA:34999",
"term_tracker_item \"https://github.com/geneontology/go-ontology/issues/27278\" xsd:anyURI",
"term_tracker_item \"https://github.com/geneontology/go-ontology/issues/30193\" xsd:anyURI"
] | null | null | false | true | 3 |
GO:0005476 | 5,476 | carnitine:O-acyl-L-carnitine antiporter activity | molecular_function | Catalysis of the reaction: carnitine (mitochondrial) + O-acyl-L-carnitine (cytoplasm) = carnitine (cytoplasm) + O-acyl-L-carnitine (mitochondrial). | [
"PMID:9032458"
] | null | [
"carnitine/acyl carnitine carrier activity",
"carnitine:acyl carnitine carrier activity",
"fatty acyl carnitine carrier"
] | [
"EXACT",
"EXACT",
"EXACT"
] | [] | [] | [
"Reactome:R-HSA-200424 \"Exchange of acylcarnitine and carnitine across the inner mitochondrial membrane\""
] | [
"GO:0015226",
"GO:0015227",
"GO:0015297"
] | [] | [] | [] | [
"GO:0015226",
"GO:0015227",
"GO:0015297"
] | [] | [] | [] | [] | [] | [] | null | null | false | true | 2 |
GO:0005479 | 5,479 | obsolete vacuolar assembly | molecular_function | OBSOLETE. (Was not defined before being made obsolete). | [
"GOC:curators"
] | This term was made obsolete because it represents a biological process and not a molecular function. | [
"vacuolar assembly"
] | [
"EXACT"
] | [] | [] | [] | [] | [] | [] | [] | [] | [] | [] | [] | [
"GO:0007033"
] | [] | [] | null | null | true | true | 5 |
GO:0005481 | 5,481 | obsolete vesicle fusion | molecular_function | OBSOLETE. (Was not defined before being made obsolete). | [
"GOC:curators"
] | This term was made obsolete because it represents a biological process and not a molecular function. | [
"vesicle fusion"
] | [
"EXACT"
] | [] | [] | [] | [] | [] | [] | [] | [] | [] | [] | [] | [] | [
"GO:0006906",
"GO:0016189",
"GO:0016192",
"GO:0019817"
] | [] | null | null | true | true | 6 |
GO:0005482 | 5,482 | obsolete vesicle targeting | molecular_function | OBSOLETE. (Was not defined before being made obsolete). | [
"GOC:curators"
] | This term was made obsolete because it represents a biological process and not a molecular function. | [
"vesicle targeting"
] | [
"EXACT"
] | [] | [] | [] | [] | [] | [] | [] | [] | [] | [] | [] | [] | [
"GO:0006903",
"GO:0016080"
] | [] | null | null | true | true | 6 |
GO:0005483 | 5,483 | soluble NSF attachment protein activity | molecular_function | Binding to both N-ethylmaleimide-sensitive fusion protein (NSF) and a cis-SNARE complex (i.e. a SNARE complex in which all proteins are associated with the same membrane) and increasing the ATPase activity of NSF, thereby allowing ATP hydrolysis by NSF to disassemble the cis-SNARE complex. | [
"GOC:mah",
"PMID:14570579",
"PMID:15556857"
] | null | [
"SNAP"
] | [
"EXACT"
] | [] | [] | [] | [
"GO:0030674"
] | [] | [] | [] | [
"GO:0030674"
] | [] | [] | [] | [] | [] | [
"term_tracker_item \"https://github.com/geneontology/go-ontology/issues/16807\" xsd:anyURI"
] | null | null | false | true | 4 |
GO:0005484 | 5,484 | SNAP receptor activity | molecular_function | Acting as a marker to identify a membrane and interacting selectively with one or more SNAREs on another membrane to mediate membrane fusion. | [
"GOC:mah",
"PMID:14570579"
] | null | [
"Q-SNARE activity",
"R-SNARE activity",
"SNAP-25",
"SNARE",
"t-SNARE activity",
"v-SNARE activity"
] | [
"NARROW",
"NARROW",
"NARROW",
"EXACT",
"NARROW",
"NARROW"
] | [
"GO:0005485",
"GO:0005486"
] | [
"goslim_chembl"
] | [] | [
"GO:0030674"
] | [
"part_of GO:0061025",
"part_of GO:0140522"
] | [
"part_of",
"part_of"
] | [
"GO:0061025",
"GO:0140522"
] | [
"GO:0030674",
"GO:0061025",
"GO:0140522"
] | [] | [] | [] | [] | [] | [
"term_tracker_item \"https://github.com/geneontology/go-ontology/issues/31564\" xsd:anyURI"
] | null | null | false | true | 8 |
GO:0005488 | 5,488 | binding | molecular_function | The selective, non-covalent, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule. | [
"GOC:ceb",
"GOC:mah",
"ISBN:0198506732"
] | null | [
"ligand"
] | [
"NARROW"
] | [] | [
"goslim_pir",
"goslim_plant"
] | [
"Wikipedia:Binding_(molecular)"
] | [
"GO:0003674"
] | [] | [] | [] | [
"GO:0003674"
] | [] | [] | [] | [] | [] | [] | null | null | false | true | 5 |
GO:0005489 | 5,489 | obsolete electron transporter activity | molecular_function | OBSOLETE. Enables the directed movement of electrons into, out of, within or between cells. | [
"GOC:ai"
] | This term was made obsolete because the activity described by the definition does not exist. | [
"class I cytochrome c",
"class II cytochrome c",
"class IIa cytochrome c",
"class IIb cytochrome c",
"class III cytochrome c",
"class IV cytochrome c",
"cytochrome b",
"cytochrome b5",
"cytochrome c3 (tetraheme)",
"cytochrome c554",
"cytochrome c7 (triheme)",
"cytochrome d",
"diheme class I ... | [
"RELATED",
"RELATED",
"RELATED",
"RELATED",
"RELATED",
"RELATED",
"RELATED",
"RELATED",
"RELATED",
"RELATED",
"RELATED",
"RELATED",
"RELATED",
"RELATED",
"EXACT",
"RELATED",
"RELATED",
"RELATED",
"RELATED",
"RELATED",
"RELATED",
"RELATED"
] | [] | [] | [] | [] | [] | [] | [] | [] | [] | [] | [] | [
"GO:0009055"
] | [] | [] | null | null | true | true | 1 |
GO:0005490 | 5,490 | obsolete cytochrome P450 | molecular_function | OBSOLETE. A cytochrome b that has a sulfur atom ligated to the iron of the prosthetic group (heme-thiolate); enzymes:typically monooxygenases acting on lipophilic substrates. | [
"ISBN:0198547684"
] | This term was made obsolete because its definition was changed and because it represents a gene product. | [
"cytochrome P450"
] | [
"EXACT"
] | [] | [] | [] | [] | [] | [] | [] | [] | [] | [] | [] | [] | [] | [] | null | null | true | true | 5 |
GO:0005496 | 5,496 | steroid binding | molecular_function | Binding to a steroid, any of a large group of substances that have in common a ring system based on 1,2-cyclopentanoperhydrophenanthrene. | [
"GOC:jl",
"ISBN:0198506732"
] | null | [] | [] | [] | [
"goslim_pir"
] | [] | [
"GO:0008289"
] | [] | [] | [] | [
"GO:0008289"
] | [] | [] | [] | [] | [] | [] | null | null | false | true | 7 |
GO:0005497 | 5,497 | androgen binding | molecular_function | Binding to an androgen, a male sex hormone. | [
"GOC:jl"
] | null | [] | [] | [] | [] | [] | [
"GO:0042562"
] | [] | [] | [] | [
"GO:0042562"
] | [] | [] | [] | [] | [] | [] | null | null | false | true | 1 |
GO:0005499 | 5,499 | vitamin D binding | molecular_function | Binding to vitamin D, any of a group of related, fat-soluble compounds that are derived from delta-5,7 steroids and play a central role in calcium metabolism. Specific forms of vitamin D include calciferol (ergocalciferol; vitamin D2) and cholecalciferol (calciol; vitamin D3). | [
"GOC:mah",
"ISBN:0471331309"
] | null | [
"calciferol binding",
"cholecalciferol binding",
"ergocalciferol binding"
] | [
"NARROW",
"NARROW",
"NARROW"
] | [] | [] | [] | [
"GO:0005496",
"GO:0019842"
] | [] | [] | [] | [
"GO:0005496",
"GO:0019842"
] | [] | [] | [] | [] | [] | [] | null | null | false | true | 1 |
GO:0005500 | 5,500 | juvenile hormone binding | molecular_function | Binding to a juvenile hormone, a sesquiterpenoid derivative that function to maintain the larval state of insects at molting and that may be required for other processes, e.g. oogenesis. | [
"GOC:jl",
"ISBN:0198506732"
] | null | [] | [] | [] | [] | [] | [
"GO:0019840",
"GO:0042562"
] | [] | [] | [] | [
"GO:0019840",
"GO:0042562"
] | [] | [] | [] | [] | [] | [] | null | null | false | true | 8 |
GO:0005501 | 5,501 | retinoid binding | molecular_function | Binding to a retinoid, a class of isoprenoids that contain or are derived from four prenyl groups linked head-to-tail. Retinoids include retinol and retinal and structurally similar natural derivatives or synthetic compounds, but need not have vitamin A activity. | [
"GOC:jl",
"ISBN:0198506732"
] | null | [] | [] | [] | [] | [
"Reactome:R-HSA-2454113 \"RBP3 transports 11cRAL to rod photoreceptor outer segment\"",
"Reactome:R-HSA-2464809 \"RBP3 regulates the transport of atROL from ROS to RPE\"",
"Reactome:R-HSA-2465934 \"11cROL translocates from Muller cells to cone photoreceptor cells\"",
"Reactome:R-HSA-2465938 \"RBP3 regulates a... | [
"GO:0019840"
] | [] | [] | [] | [
"GO:0019840"
] | [] | [] | [] | [] | [] | [] | null | null | false | true | 2 |
GO:0005502 | 5,502 | 11-cis retinal binding | molecular_function | Binding to 11-cis retinal, an isomer of retinal that plays an important role in the visual process in most vertebrates. 11-cis retinal combines with opsin in the rods (scotopsin) to form rhodopsin or visual purple. Retinal is one of the three compounds that makes up vitamin A. | [
"PMID:24403072"
] | null | [
"11-cis retinaldehyde binding",
"11-cis-retinal binding",
"vitamin A binding"
] | [
"EXACT",
"NARROW",
"BROAD"
] | [] | [] | [] | [
"GO:0016918"
] | [] | [] | [] | [
"GO:0016918"
] | [] | [] | [] | [] | [] | [] | null | null | false | true | 8 |
GO:0005503 | 5,503 | all-trans retinal binding | molecular_function | Binding to all-trans retinal, a compound that plays an important role in the visual process in most vertebrates. All-trans retinal (trans r., visual yellow) results from the bleaching of rhodopsin by light, in which the 11-cis form is converted to the all-trans form. Retinal is one of the forms of vitamin A. | [
"GOC:curators"
] | null | [
"all-trans retinaldehyde binding",
"trans retinal binding",
"visual yellow binding",
"vitamin A binding",
"xanthopsin"
] | [
"EXACT",
"EXACT",
"EXACT",
"BROAD",
"RELATED"
] | [] | [] | [] | [
"GO:0016918"
] | [] | [] | [] | [
"GO:0016918"
] | [] | [] | [] | [] | [] | [
"term_tracker_item \"https://github.com/geneontology/go-ontology/issues/14750\" xsd:anyURI"
] | null | null | false | true | 1 |
GO:0005504 | 5,504 | fatty acid binding | molecular_function | Binding to a fatty acid, an aliphatic monocarboxylic acids liberated from naturally occurring fats and oils by hydrolysis. | [
"ISBN:0198506732"
] | null | [] | [] | [] | [] | [] | [
"GO:0008289",
"GO:0033293"
] | [] | [] | [] | [
"GO:0008289",
"GO:0033293"
] | [] | [] | [] | [] | [] | [] | null | null | false | true | 1 |
GO:0005505 | 5,505 | obsolete heavy metal binding | molecular_function | OBSOLETE. Interacting selectively with a heavy metal, a metal that can form a coordination bond with a protein, as opposed to an alkali or alkaline-earth metal that can only form an ionic bond; this definition includes the following biologically relevant heavy metals: Cd, Co, Cu, Fe, Hg, Mn, Mo, Ni, V, W, Zn. | [
"GOC:kd",
"GOC:mah"
] | This term was made obsolete because 'heavy metal' is an ambiguous grouping term which has no set meaning (see Pure Appl. Chem. Vol. 74, No. 5, pp. 793-807, 2002, for more information). | [
"heavy metal binding"
] | [
"EXACT"
] | [] | [] | [] | [] | [] | [] | [] | [] | [] | [] | [] | [] | [
"GO:0046872"
] | [] | null | null | true | true | 1 |
GO:0005507 | 5,507 | copper ion binding | molecular_function | Binding to a copper (Cu) ion. | [
"GOC:ai"
] | null | [
"copper binding",
"copper/cadmium binding"
] | [
"EXACT",
"BROAD"
] | [] | [] | [] | [
"GO:0046914"
] | [] | [] | [] | [
"GO:0046914"
] | [] | [] | [] | [] | [] | [] | null | null | false | true | 5 |
GO:0005508 | 5,508 | obsolete copper/cadmium binding | molecular_function | OBSOLETE. (Was not defined before being made obsolete). | [
"GOC:ai"
] | This term was made obsolete because it represents a composite function. | [
"copper/cadmium binding"
] | [
"EXACT"
] | [] | [] | [] | [] | [] | [] | [] | [] | [] | [] | [] | [] | [
"GO:0005507",
"GO:0046870"
] | [] | null | null | true | true | 6 |
GO:0005509 | 5,509 | calcium ion binding | molecular_function | Binding to a calcium ion (Ca2+). | [
"GOC:ai"
] | null | [
"calcium ion storage activity"
] | [
"RELATED"
] | [] | [] | [] | [
"GO:0046872"
] | [] | [] | [] | [
"GO:0046872"
] | [] | [] | [] | [] | [] | [] | null | null | false | true | 8 |
GO:0005513 | 5,513 | detection of calcium ion | biological_process | The series of events in which a calcium ion stimulus is received by a cell and converted into a molecular signal. | [
"GOC:pg"
] | null | [
"Ca2+ ion detection",
"calcium ion detection",
"calcium ion sensing",
"detection of Ca2+ ion"
] | [
"EXACT",
"EXACT",
"EXACT",
"EXACT"
] | [] | [] | [] | [
"GO:0009593",
"GO:0051592"
] | [] | [] | [] | [
"GO:0009593",
"GO:0051592"
] | [] | [] | [] | [] | [] | [] | null | null | false | true | 5 |
GO:0005514 | 5,514 | obsolete calcium ion storage activity | molecular_function | OBSOLETE. (Was not defined before being made obsolete). | [
"GOC:ai"
] | This term was made obsolete because it represents a biological process. | [
"calcium ion storage activity"
] | [
"EXACT"
] | [] | [] | [] | [] | [] | [] | [] | [] | [] | [] | [] | [] | [
"GO:0005509"
] | [] | null | null | true | true | 3 |
GO:0005515 | 5,515 | protein binding | molecular_function | Binding to a protein. | [
"GOC:curators"
] | null | [
"glycoprotein binding",
"protein amino acid binding"
] | [
"NARROW",
"EXACT"
] | [
"GO:0001948",
"GO:0045308"
] | [
"goslim_candida",
"goslim_chembl",
"goslim_euk_cellular_processes_ribbon",
"goslim_metagenomics",
"goslim_pir",
"goslim_plant",
"goslim_plant_ribbon",
"goslim_prokaryote_ribbon"
] | [
"Reactome:R-HSA-9866132 \"Intermediate II binds CYC1, UQCRC1, UQCRC2, UQCRH\""
] | [
"GO:0005488"
] | [] | [] | [] | [
"GO:0005488"
] | [] | [] | [] | [] | [] | [] | null | null | false | true | 5 |
GO:0005516 | 5,516 | calmodulin binding | molecular_function | Binding to calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states. | [
"GOC:krc"
] | null | [] | [] | [] | [
"goslim_chembl"
] | [
"Reactome:R-HSA-202110 \"eNOS:Caveolin-1 complex binds to CaM\""
] | [
"GO:0005515"
] | [] | [] | [] | [
"GO:0005515"
] | [] | [] | [] | [] | [] | [] | null | null | false | true | 5 |
GO:0005517 | 5,517 | obsolete calmodulin inhibitor activity | molecular_function | OBSOLETE. This term was not defined before being made obsolete. | [
"GOC:tb"
] | This term was made obsolete because it refers to a non-existent molecular function term, 'calmodulin activity'. | [
"calmodulin inhibitor activity"
] | [
"EXACT"
] | [] | [] | [] | [] | [] | [] | [] | [] | [] | [] | [] | [] | [
"GO:0005516"
] | [] | null | null | true | true | 7 |
GO:0005518 | 5,518 | collagen binding | molecular_function | Binding to collagen, a group of fibrous proteins of very high tensile strength that form the main component of connective tissue in animals. Collagen is highly enriched in glycine (some regions are 33% glycine) and proline, occurring predominantly as 3-hydroxyproline (about 20%). | [
"GOC:ai",
"ISBN:0198506732"
] | null | [] | [] | [] | [] | [] | [
"GO:0044877"
] | [] | [] | [] | [
"GO:0044877"
] | [] | [] | [] | [] | [] | [] | null | null | false | true | 2 |
GO:0005519 | 5,519 | cytoskeletal regulatory protein binding | molecular_function | Binding to a protein involved in modulating the reorganization of the cytoskeleton. | [
"GOC:curators",
"PMID:15163540"
] | null | [] | [] | [] | [] | [] | [
"GO:0008092"
] | [] | [] | [] | [
"GO:0008092"
] | [] | [] | [] | [] | [] | [] | null | null | false | true | 7 |
GO:0005521 | 5,521 | lamin binding | molecular_function | Binding to lamin; any of a group of intermediate-filament proteins that form the fibrous matrix on the inner surface of the nuclear envelope. | [
"GOC:jl",
"ISBN:0198506732"
] | null | [
"lamin/chromatin binding"
] | [
"BROAD"
] | [] | [] | [] | [
"GO:0005515"
] | [] | [] | [] | [
"GO:0005515"
] | [] | [] | [] | [] | [] | [] | null | null | false | true | 8 |
GO:0005522 | 5,522 | profilin binding | molecular_function | Binding to profilin, an actin-binding protein that forms a complex with G-actin and prevents it from polymerizing to form F-actin. | [
"ISBN:0721662544"
] | null | [] | [] | [] | [] | [] | [
"GO:0005515"
] | [] | [] | [] | [
"GO:0005515"
] | [] | [] | [] | [] | [] | [] | null | null | false | true | 1 |
GO:0005523 | 5,523 | tropomyosin binding | molecular_function | Binding to tropomyosin, a protein associated with actin filaments both in cytoplasm and, in association with troponin, in the thin filament of striated muscle. | [
"GOC:curators",
"ISBN:0815316194"
] | null | [] | [] | [] | [] | [] | [
"GO:0008092"
] | [] | [] | [] | [
"GO:0008092"
] | [] | [] | [] | [] | [] | [] | null | null | false | true | 2 |
GO:0005527 | 5,527 | macrolide binding | molecular_function | Binding to a macrolide, any of a large group of structurally related antibiotics produced by Streptomyces species. | [
"GOC:jl",
"ISBN:0198506732"
] | null | [] | [] | [] | [] | [] | [
"GO:0005488"
] | [] | [] | [] | [
"GO:0005488"
] | [] | [] | [] | [] | [] | [] | null | null | false | true | 6 |
GO:0005528 | 5,528 | FK506 binding | molecular_function | Binding to a 23-membered macrolide lactone FK506. | [
"GOC:jl"
] | null | [
"FK506-sensitive peptidyl-prolyl cis-trans isomerase"
] | [
"RELATED"
] | [] | [] | [] | [
"GO:0005527"
] | [] | [] | [] | [
"GO:0005527"
] | [] | [] | [] | [] | [] | [] | null | null | false | true | 5 |
GO:0005530 | 5,530 | obsolete lectin | molecular_function | OBSOLETE. Lectins are proteins obtained particularly from the seeds of leguminous plants, but also from many other plant and animal sources, that have binding sites for specific mono or oligosaccharides in cell walls or membranes. They thereby change the physiology of the membrane to cause agglutination, mitosis, or ot... | [
"GOC:curators"
] | This term was made obsolete because it refers to a class of gene products. | [
"lectin"
] | [
"EXACT"
] | [] | [] | [] | [] | [] | [] | [] | [] | [] | [] | [] | [] | [
"GO:0007157",
"GO:0030246"
] | [] | null | null | true | true | 4 |
GO:0005531 | 5,531 | obsolete galactose binding lectin | molecular_function | OBSOLETE. (Was not defined before being made obsolete). | [
"GOC:ai"
] | This term was made obsolete because it refers to a class of gene products. | [
"galactose binding lectin"
] | [
"EXACT"
] | [] | [] | [] | [] | [] | [] | [] | [] | [] | [] | [] | [] | [
"GO:0005534",
"GO:0007157"
] | [] | null | null | true | true | 8 |
GO:0005532 | 5,532 | obsolete mannose binding lectin | molecular_function | OBSOLETE. (Was not defined before being made obsolete). | [
"GOC:ai"
] | This term was made obsolete because it refers to a class of gene products. | [
"mannose binding lectin",
"mannose receptor"
] | [
"EXACT",
"RELATED"
] | [] | [] | [] | [] | [] | [] | [] | [] | [] | [] | [] | [] | [
"GO:0005537",
"GO:0007157"
] | [] | null | null | true | true | 5 |
GO:0005533 | 5,533 | obsolete N-acetylgalactosamine lectin | molecular_function | OBSOLETE. (Was not defined before being made obsolete). | [
"GOC:ai"
] | This term was made obsolete because it refers to a class of gene products. | [
"N-acetylgalactosamine lectin"
] | [
"EXACT"
] | [] | [] | [] | [] | [] | [] | [] | [] | [] | [] | [] | [] | [
"GO:0007157",
"GO:0046871"
] | [] | null | null | true | true | 9 |
GO:0005534 | 5,534 | galactose binding | molecular_function | Binding to aldohexose galactose (galacto-hexose), a common constituent of many oligo- and polysaccharides. | [
"GOC:jl",
"ISBN:0198506732"
] | null | [
"galactose binding lectin"
] | [
"RELATED"
] | [] | [] | [] | [
"GO:0048029"
] | [] | [] | [] | [
"GO:0048029"
] | [] | [] | [] | [] | [] | [] | null | null | false | true | 9 |
GO:0005536 | 5,536 | D-glucose binding | molecular_function | Binding to D-enantiomers of glucose. | [
"GOC:jl"
] | null | [
"glucose binding"
] | [
"BROAD"
] | [] | [] | [] | [
"GO:0048029"
] | [] | [] | [] | [
"GO:0048029"
] | [] | [] | [] | [] | [] | [] | null | null | false | true | 5 |
GO:0005537 | 5,537 | D-mannose binding | molecular_function | Binding to mannose, a monosaccharide hexose, stereoisomeric with glucose, that occurs naturally only in polymerized forms called mannans. | [
"GOC:jl",
"ISBN:0192800981"
] | null | [
"mannose binding",
"mannose binding lectin"
] | [
"BROAD",
"RELATED"
] | [] | [
"goslim_chembl"
] | [
"Reactome:R-HSA-947991 \"Transport of glycoproteins with Man8 (or Man9) N-glycans to the Golgi\""
] | [
"GO:0048029"
] | [] | [] | [] | [
"GO:0048029"
] | [] | [] | [] | [] | [] | [] | null | null | false | true | 3 |
GO:0005539 | 5,539 | glycosaminoglycan binding | molecular_function | Binding to a glycan (polysaccharide) containing a substantial proportion of aminomonosaccharide residues. | [
"GOC:jl",
"ISBN:0198506732"
] | null | [] | [] | [] | [
"goslim_chembl"
] | [] | [
"GO:0097367"
] | [] | [] | [] | [
"GO:0097367"
] | [] | [] | [] | [] | [] | [] | null | null | false | true | 5 |
GO:0005540 | 5,540 | hyaluronic acid binding | molecular_function | Binding to hyaluronic acid, a polymer composed of repeating dimeric units of glucuronic acid and N-acetyl glucosamine. | [
"GOC:jl"
] | null | [
"hyaluronan binding"
] | [
"EXACT"
] | [] | [] | [] | [
"GO:0031406"
] | [] | [] | [] | [
"GO:0031406"
] | [] | [] | [] | [] | [] | [] | null | null | false | true | 7 |
GO:0005541 | 5,541 | obsolete acyl-CoA or acyl binding | molecular_function | OBSOLETE. Interacting selectively with acyl-CoA or acyl, any derivative of coenzyme A in which the sulfhydryl group is in thiolester linkage with a fatty acyl group, or any group formally derived by removal of a hydroxyl group from the acid function of an organic acid. | [
"GOC:jl",
"ISBN:0198506732"
] | This term was made obsolete because it was replaced by more appropriate terms. | [
"acyl-CoA or acyl binding"
] | [
"EXACT"
] | [] | [] | [] | [] | [] | [] | [] | [] | [] | [] | [] | [] | [
"GO:0000035",
"GO:0000062"
] | [] | null | null | true | true | 2 |
GO:0005542 | 5,542 | folic acid binding | molecular_function | Binding to folic acid, pteroylglutamic acid. Folic acid is widely distributed as a member of the vitamin B complex and is essential for the synthesis of purine and pyrimidines. | [
"GOC:jl",
"ISBN:0198506732"
] | null | [
"folate binding",
"vitamin B9 binding",
"vitamin M binding"
] | [
"EXACT",
"EXACT",
"EXACT"
] | [] | [] | [] | [
"GO:0019842",
"GO:0031406",
"GO:0072341",
"GO:1901363"
] | [] | [] | [] | [
"GO:0019842",
"GO:0031406",
"GO:0072341",
"GO:1901363"
] | [] | [] | [] | [] | [] | [] | null | null | false | true | 2 |
GO:0005543 | 5,543 | phospholipid binding | molecular_function | Binding to a phospholipid, a class of lipids containing phosphoric acid as a mono- or diester. | [
"ISBN:0198506732"
] | null | [] | [] | [] | [] | [] | [
"GO:0008289"
] | [] | [] | [] | [
"GO:0008289"
] | [] | [] | [] | [] | [] | [] | null | null | false | true | 6 |
GO:0005544 | 5,544 | calcium-dependent phospholipid binding | molecular_function | Binding to a phospholipid, a class of lipids containing phosphoric acid as a mono- or diester, in the presence of calcium. | [
"GOC:jl"
] | null | [] | [] | [] | [] | [] | [
"GO:0005543"
] | [] | [] | [] | [
"GO:0005543"
] | [] | [] | [] | [] | [] | [] | null | null | false | true | 4 |
GO:0005546 | 5,546 | phosphatidylinositol-4,5-bisphosphate binding | molecular_function | Binding to phosphatidylinositol-4,5-bisphosphate, a derivative of phosphatidylinositol in which the inositol ring is phosphorylated at the 4' and 5' positions. | [
"GOC:bf",
"GOC:jl"
] | null | [
"1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate binding",
"phosphatidylinositol 4,5-bisphosphate binding",
"PIP2 binding",
"PtdIns(4,5)P2 binding"
] | [
"EXACT",
"EXACT",
"BROAD",
"EXACT"
] | [] | [] | [] | [
"GO:1901981",
"GO:1902936"
] | [] | [] | [] | [
"GO:1901981",
"GO:1902936"
] | [] | [] | [] | [] | [] | [] | null | null | false | true | 2 |
GO:0005547 | 5,547 | phosphatidylinositol-3,4,5-trisphosphate binding | molecular_function | Binding to phosphatidylinositol-3,4,5-trisphosphate, a derivative of phosphatidylinositol in which the inositol ring is phosphorylated at the 3', 4' and 5' positions. | [
"GOC:bf",
"GOC:jl"
] | null | [
"PIP3 binding"
] | [
"EXACT"
] | [] | [] | [] | [
"GO:0043168",
"GO:1901981"
] | [] | [] | [] | [
"GO:0043168",
"GO:1901981"
] | [] | [] | [] | [] | [] | [] | null | null | false | true | 8 |
GO:0005548 | 5,548 | obsolete phospholipid transporter activity | molecular_function | OBSOLETE. Enables the directed movement of phospholipids into, out of or within a cell, or between cells. Phospholipids are a class of lipids containing phosphoric acid as a mono- or diester. | [
"GOC:ai",
"ISBN:0198506732"
] | This term was obsoleted because it refers to the substrate rather than to the transport mechanism as a primary classification. | [] | [] | [
"GO:0008497"
] | [] | [
"Reactome:R-HSA-216757 \"4xPALM-C-p-2S-ABCA1 tetramer transports PL from transport vesicle membrane to plasma membrane\"",
"Reactome:R-HSA-382553 \"ABCA7:Apo1A-mediated phospholipid efflux\"",
"Reactome:R-HSA-5678706 \"ABCB4 transports PC from plasma membrane to extracellular region\"",
"Reactome:R-HSA-567874... | [] | [] | [] | [] | [] | [] | [] | [] | [] | [
"GO:0120014",
"GO:0170055"
] | [
"term_tracker_item \"https://github.com/geneontology/go-ontology/issues/31454\" xsd:anyURI",
"term_tracker_item \"https://github.com/geneontology/go-ontology/issues/31460\" xsd:anyURI"
] | null | null | true | true | 6 |
GO:0005550 | 5,550 | pheromone binding | molecular_function | Binding to a pheromone, a substance, or characteristic mixture of substances, that is secreted and released by an organism and detected by a second organism of the same or a closely related species, in which it causes a specific reaction, such as a definite behavioral reaction or a developmental process. | [
"GOC:ai"
] | null | [] | [] | [] | [] | [] | [
"GO:0005549"
] | [] | [] | [] | [
"GO:0005549"
] | [] | [] | [] | [] | [] | [] | null | null | false | true | 4 |
GO:0005551 | 5,551 | obsolete ubiquitin | molecular_function | OBSOLETE. (Was not defined before being made obsolete). | [
"GOC:curators"
] | This term was made obsolete because it represents a gene product. | [] | [] | [] | [] | [] | [] | [] | [] | [] | [] | [] | [] | [] | [] | [
"GO:0016567",
"GO:0031386"
] | [] | null | null | true | true | 4 |
GO:0005553 | 5,553 | obsolete ubiquitin-ribosomal protein fusion protein | molecular_function | OBSOLETE. A protein encoded by some ubiquitin genes which consists of a single copy of ubiquitin fused to a ribosomal protein. | [
"ISBN:0198506732"
] | This term was made obsolete because it describes a gene product. | [
"ubiquitin-ribosomal protein fusion protein"
] | [
"EXACT"
] | [] | [] | [] | [] | [] | [] | [] | [] | [] | [] | [] | [] | [] | [] | null | null | true | true | 7 |
GO:0005555 | 5,555 | obsolete blood group antigen | molecular_function | OBSOLETE. (Was not defined before being made obsolete). | [
"GOC:mah"
] | This term was made obsolete because it represents a gene product, and because describing something as an 'antigen' means that an organism can produce antibodies to it, which says nothing about the gene product activity. | [
"blood group antigen"
] | [
"EXACT"
] | [] | [] | [] | [] | [] | [] | [] | [] | [] | [] | [] | [] | [] | [] | null | null | true | true | 7 |
GO:0005557 | 5,557 | obsolete lymphocyte antigen | molecular_function | OBSOLETE. (Was not defined before being made obsolete). | [
"GOC:mah"
] | This term was made obsolete because it represents a gene product, and because describing something as an 'antigen' means that an organism can produce antibodies to it, which says nothing about the gene product activity. | [
"lymphocyte antigen"
] | [
"EXACT"
] | [] | [] | [] | [] | [] | [] | [] | [] | [] | [] | [] | [] | [] | [] | null | null | true | true | 6 |
GO:0005558 | 5,558 | obsolete minor histocompatibility antigen | molecular_function | OBSOLETE. (Was not defined before being made obsolete). | [
"GOC:mah"
] | This term was made obsolete because it represents a gene product, and because describing something as an 'antigen' means that an organism can produce antibodies to it, which says nothing about the gene product activity. | [
"minor histocompatibility antigen"
] | [
"EXACT"
] | [] | [] | [] | [] | [] | [] | [] | [] | [] | [] | [] | [] | [] | [] | null | null | true | true | 6 |
GO:0005559 | 5,559 | obsolete ribozyme | cellular_component | OBSOLETE. (Was not defined before being made obsolete). | [
"GOC:ai"
] | Note that this term was deleted from GO and was restored to the ontology in Feb 2003 to ensure that the ID is not reused. | [
"ribozyme"
] | [
"EXACT"
] | [] | [] | [] | [] | [] | [] | [] | [] | [] | [] | [] | [] | [] | [] | null | null | true | true | 7 |
GO:0005561 | 5,561 | obsolete nucleic acid | cellular_component | OBSOLETE. (Was not defined before being made obsolete). | [
"GOC:ai"
] | Note that this term was deleted from GO and was restored to the ontology in Feb 2003 to ensure that the ID is not reused. | [
"nucleic acid"
] | [
"EXACT"
] | [] | [] | [] | [] | [] | [] | [] | [] | [] | [] | [] | [] | [] | [] | null | null | true | true | 4 |
GO:0005562 | 5,562 | obsolete RNA | cellular_component | OBSOLETE. (Was not defined before being made obsolete). | [
"GOC:ai"
] | Note that this term was deleted from GO and was restored to the ontology in Feb 2003 to ensure that the ID is not reused. | [
"RNA"
] | [
"EXACT"
] | [] | [] | [] | [] | [] | [] | [] | [] | [] | [] | [] | [] | [] | [] | null | null | true | true | 5 |
GO:0005563 | 5,563 | obsolete transfer RNA | molecular_function | OBSOLETE. (Was not defined before being made obsolete). | [
"GOC:mah"
] | This term was made obsolete because it represents a gene product. | [
"transfer RNA"
] | [
"EXACT"
] | [] | [] | [] | [] | [] | [] | [] | [] | [] | [] | [] | [
"GO:0030533"
] | [] | [] | null | null | true | true | 6 |
GO:0005564 | 5,564 | obsolete cytosolic tRNA | cellular_component | OBSOLETE. (Was not defined before being made obsolete). | [
"GOC:ai"
] | Note that this term was deleted from GO and was restored to the ontology in Feb 2003 to ensure that the ID is not reused. | [
"cytosolic tRNA"
] | [
"EXACT"
] | [] | [] | [] | [] | [] | [] | [] | [] | [] | [] | [] | [] | [] | [] | null | null | true | true | 3 |
GO:0005565 | 5,565 | obsolete mitochondrial tRNA | cellular_component | OBSOLETE. (Was not defined before being made obsolete). | [
"GOC:ai"
] | Note that this term was deleted from GO rather than being made obsolete and was restored to the ontology in Feb 2003 to ensure that the ID is not reused. | [
"mitochondrial tRNA"
] | [
"EXACT"
] | [] | [] | [] | [] | [] | [] | [] | [] | [] | [] | [] | [] | [] | [] | null | null | true | true | 4 |
GO:0005566 | 5,566 | obsolete ribosomal RNA | molecular_function | OBSOLETE. (Was not defined before being made obsolete). | [
"GOC:mah"
] | This term was made obsolete because it represents a gene product. | [
"ribosomal RNA"
] | [
"EXACT"
] | [] | [] | [] | [] | [] | [] | [] | [] | [] | [] | [] | [] | [
"GO:0003735",
"GO:0005840"
] | [] | null | null | true | true | 4 |
GO:0005567 | 5,567 | obsolete cytosolic ribosomal RNA | cellular_component | OBSOLETE. (Was not defined before being made obsolete). | [
"GOC:ai"
] | Note that this term was deleted from GO and was restored to the ontology in Feb 2003 to ensure that the ID is not reused. | [
"cytosolic ribosomal RNA"
] | [
"EXACT"
] | [] | [] | [] | [] | [] | [] | [] | [] | [] | [] | [] | [] | [] | [] | null | null | true | true | 3 |
GO:0005568 | 5,568 | obsolete mitochondrial rRNA | cellular_component | OBSOLETE. (Was not defined before being made obsolete). | [
"GOC:ai"
] | Note that this term was deleted from GO rather than being made obsolete and was restored to the ontology in Feb 2003 to ensure that the ID is not reused. | [
"mitochondrial rRNA"
] | [
"EXACT"
] | [] | [] | [] | [] | [] | [] | [] | [] | [] | [] | [] | [] | [] | [] | null | null | true | true | 6 |
GO:0005569 | 5,569 | obsolete small nucleolar RNA | molecular_function | OBSOLETE. (Was not defined before being made obsolete). | [
"GOC:mah"
] | This term was made obsolete because it represents gene products. | [
"small nucleolar RNA"
] | [
"EXACT"
] | [] | [] | [] | [] | [] | [] | [] | [] | [] | [] | [] | [] | [
"GO:0030555"
] | [] | null | null | true | true | 9 |
GO:0005570 | 5,570 | obsolete small nuclear RNA | molecular_function | OBSOLETE. (Was not defined before being made obsolete). | [
"GOC:mah"
] | This term was made obsolete because it represents gene products. | [
"small nuclear RNA"
] | [
"EXACT"
] | [] | [] | [] | [] | [] | [] | [] | [] | [] | [] | [] | [] | [
"GO:0000375",
"GO:0017069"
] | [] | null | null | true | true | 7 |
GO:0005571 | 5,571 | obsolete untranslated RNA | cellular_component | OBSOLETE. (Was not defined before being made obsolete). | [
"GOC:ai"
] | Note that this term was deleted from GO and was restored to the ontology in Feb 2003 to ensure that the ID is not reused. | [
"untranslated RNA"
] | [
"EXACT"
] | [] | [] | [] | [] | [] | [] | [] | [] | [] | [] | [] | [] | [] | [] | null | null | true | true | 1 |
GO:0005572 | 5,572 | obsolete RNA polymerase II transcribed untranslated RNA | cellular_component | OBSOLETE. (Was not defined before being made obsolete). | [
"GOC:ai"
] | Note that this term was deleted from GO and was restored to the ontology in Feb 2003 to ensure that the ID is not reused. | [
"RNA polymerase II transcribed untranslated RNA"
] | [
"EXACT"
] | [] | [] | [] | [] | [] | [] | [] | [] | [] | [] | [] | [] | [] | [] | null | null | true | true | 8 |
GO:0005573 | 5,573 | obsolete telomerase RNA | cellular_component | OBSOLETE. (Was not defined before being made obsolete). | [
"GOC:krc"
] | This term was made obsolete because it represents a gene product. | [
"telomerase RNA"
] | [
"EXACT"
] | [] | [] | [] | [] | [] | [] | [] | [] | [] | [] | [] | [
"GO:0000332"
] | [] | [] | null | null | true | true | 6 |
GO:0005574 | 5,574 | obsolete DNA | cellular_component | OBSOLETE. (Was not defined before being made obsolete). | [
"GOC:ai"
] | Note that this term was deleted from GO and was restored to the ontology in Feb 2003 to ensure that the ID is not reused. | [
"DNA"
] | [
"EXACT"
] | [] | [] | [] | [] | [] | [] | [] | [] | [] | [] | [] | [] | [] | [] | null | null | true | true | 7 |
GO:0005575 | 5,575 | cellular_component | cellular_component | A location, relative to cellular compartments and structures, occupied by a macromolecular machine. There are three types of cellular components described in the gene ontology: (1) the cellular anatomical entity where a gene product carries out a molecular function (e.g., plasma membrane, cytoskeleton) or membrane-encl... | [
"GOC:pdt"
] | Note that, in addition to forming the root of the cellular component ontology, this term is recommended for the annotation of gene products whose cellular component is unknown. When this term is used for annotation, it indicates that no information was available about the cellular component of the gene product annotate... | [
"cell or subcellular entity",
"cellular component",
"subcellular entity"
] | [
"EXACT",
"EXACT",
"RELATED"
] | [
"GO:0008372"
] | [
"goslim_candida",
"goslim_chembl",
"goslim_metagenomics",
"goslim_pir",
"goslim_plant",
"goslim_yeast"
] | [
"NIF_Subcellular:sao1337158144"
] | [] | [] | [] | [] | [] | [] | [] | [] | [] | [] | [
"term_tracker_item \"https://github.com/geneontology/go-ontology/issues/17729\" xsd:anyURI"
] | null | null | false | true | 8 |
GO:0005576 | 5,576 | extracellular region | cellular_component | The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite. | [
"GOC:curators"
] | Note that this term is intended to annotate gene products that are not attached to the cell surface. For gene products from multicellular organisms which are secreted from a cell but retained within the organism (i.e. released into the interstitial fluid or blood), consider the cellular component term 'extracellular sp... | [
"extracellular"
] | [
"EXACT"
] | [] | [
"goslim_agr",
"goslim_candida",
"goslim_chembl",
"goslim_drosophila",
"goslim_euk_cellular_processes_ribbon",
"goslim_flybase_ribbon",
"goslim_generic",
"goslim_metagenomics",
"goslim_mouse",
"goslim_pir",
"goslim_plant",
"goslim_plant_ribbon",
"goslim_prokaryote",
"goslim_prokaryote_ribbo... | [
"Wikipedia:Extracellular"
] | [
"GO:0110165"
] | [] | [] | [] | [
"GO:0110165"
] | [] | [] | [] | [] | [] | [] | null | null | false | true | 1 |
GO:0005577 | 5,577 | fibrinogen complex | cellular_component | A highly soluble, elongated protein complex found in blood plasma and involved in clot formation. It is converted into fibrin monomer by the action of thrombin. In the mouse, fibrinogen is a hexamer, 46 nm long and 9 nm maximal diameter, containing two sets of nonidentical chains (alpha, beta, and gamma) linked togethe... | [
"ISBN:0198547684"
] | null | [
"fibrinogen",
"fibrinogen alpha chain",
"fibrinogen beta chain",
"fibrinogen gamma chain"
] | [
"EXACT",
"NARROW",
"NARROW",
"NARROW"
] | [] | [] | [] | [
"GO:0140392"
] | [] | [] | [] | [
"GO:0140392"
] | [] | [] | [] | [] | [] | [] | null | null | false | true | 3 |
GO:0005579 | 5,579 | membrane attack complex | cellular_component | A protein complex produced by sequentially activated components of the complement cascade inserted into a target cell membrane and forming a pore leading to cell lysis via ion and water flow. | [
"GOC:add",
"ISBN:0198547684",
"ISBN:068340007X",
"ISBN:0781735149"
] | null | [
"MAC",
"membrane attack complex protein alphaM chain",
"membrane attack complex protein beta2 chain",
"TCC",
"terminal complement complex"
] | [
"EXACT",
"NARROW",
"NARROW",
"EXACT",
"EXACT"
] | [] | [] | [
"Wikipedia:Complement_membrane_attack_complex"
] | [
"GO:0046930",
"GO:0098797"
] | [] | [] | [] | [
"GO:0046930",
"GO:0098797"
] | [] | [] | [] | [] | [] | [] | null | null | false | true | 8 |
GO:0005581 | 5,581 | collagen trimer | cellular_component | A protein complex consisting of three collagen chains assembled into a left-handed triple helix. These trimers typically assemble into higher order structures. | [
"GOC:dos",
"GOC:mah",
"PMID:19693541",
"PMID:21421911"
] | null | [] | [] | [] | [] | [
"Wikipedia:Collagen"
] | [
"GO:0032991"
] | [] | [] | [] | [
"GO:0032991"
] | [] | [] | [] | [] | [] | [] | null | null | false | true | 5 |
GO:0005582 | 5,582 | collagen type XV trimer | cellular_component | A collagen homotrimer of alpha1(XV) chains; a chondroitin sulfate proteoglycan often found in specialized basement membranes where it bridges between fibrils. | [
"PMID:11158616",
"PMID:11937714",
"PMID:21421911"
] | null | [] | [] | [] | [] | [] | [
"GO:0140156"
] | [] | [] | [] | [
"GO:0140156"
] | [] | [] | [] | [] | [] | [] | null | null | false | true | 1 |
GO:0005583 | 5,583 | fibrillar collagen trimer | cellular_component | Any triple helical collagen trimer that forms fibrils. | [
"PMID:21421911"
] | null | [] | [] | [] | [] | [] | [
"GO:0005581",
"GO:0140392"
] | [
"part_of GO:0098643"
] | [
"part_of"
] | [
"GO:0098643"
] | [
"GO:0005581",
"GO:0098643",
"GO:0140392"
] | [
"GO:0005581",
"part_of GO:0098643"
] | [] | [
"GO:0030936"
] | [] | [] | [] | null | null | false | true | 7 |
GO:0005585 | 5,585 | collagen type II trimer | cellular_component | A collagen homotrimer of alpha1(II) chains; type II collagen triple helices associate to form fibrils. | [
"PMID:21421911"
] | null | [] | [] | [] | [] | [
"Wikipedia:Collagen_type_II"
] | [
"GO:0005583"
] | [] | [] | [] | [
"GO:0005583"
] | [] | [] | [] | [] | [] | [] | null | null | false | true | 1 |
GO:0005586 | 5,586 | collagen type III trimer | cellular_component | A collagen homotrimer of alpha1(III) chains; type III collagen triple helices associate to form fibrils. | [
"PMID:21421911"
] | null | [] | [] | [] | [] | [] | [
"GO:0005583"
] | [] | [] | [] | [
"GO:0005583"
] | [] | [] | [] | [] | [] | [] | null | null | false | true | 6 |
GO:0005587 | 5,587 | collagen type IV trimer | cellular_component | A collagen heterotrimer containing type IV alpha chains; [alpha1(IV)]2alpha2(IV) trimers are commonly observed, although more type IV alpha chains exist and may be present in type IV trimers; type IV collagen triple helices associate to form 3 dimensional nets within basement membranes. | [
"PMID:19693541",
"PMID:21421911"
] | null | [] | [] | [] | [] | [
"Wikipedia:Collagen_type_IV"
] | [
"GO:0098642"
] | [
"part_of GO:0140154"
] | [
"part_of"
] | [
"GO:0140154"
] | [
"GO:0098642",
"GO:0140154"
] | [] | [] | [] | [] | [] | [
"term_tracker_item \"https://github.com/geneontology/go-ontology/issues/30148\" xsd:anyURI"
] | null | null | false | true | 6 |
GO:0005588 | 5,588 | collagen type V trimer | cellular_component | A collagen heterotrimer containing type V alpha chains; [alpha1(V)]2alpha2(V) and alpha1(V)alpha2(V)alpha3(V) trimers have been observed; type V collagen triple helices associate to form fibrils. | [
"PMID:21421911"
] | null | [] | [] | [] | [] | [] | [
"GO:0005583"
] | [] | [] | [] | [
"GO:0005583"
] | [] | [] | [] | [] | [] | [] | null | null | false | true | 6 |
GO:0005589 | 5,589 | collagen type VI trimer | cellular_component | A collagen heterotrimer containing type VI alpha chains in alpha1(VI)alpha2(VI)alpha3(VI) trimers; type VI collagen triple helices associate to form beaded fibrils. | [
"PMID:19693541",
"PMID:21421911"
] | null | [] | [] | [] | [] | [] | [
"GO:0140158",
"GO:0140392"
] | [
"part_of GO:0098647"
] | [
"part_of"
] | [
"GO:0098647"
] | [
"GO:0098647",
"GO:0140158",
"GO:0140392"
] | [] | [] | [] | [] | [] | [] | null | null | false | true | 1 |
GO:0005590 | 5,590 | collagen type VII trimer | cellular_component | A collagen homotrimer of alpha1(VII) chains; type VII collagen triple helices form antiparallel dimer, which in turn associate laterally to form anchoring fibrils that connect type IV collagen in the basal lamina to plaques in the underlying connective tissue. It binds laminin. | [
"PMID:19693541"
] | null | [] | [] | [] | [] | [] | [
"GO:0140158",
"GO:0140392"
] | [
"part_of GO:0098648"
] | [
"part_of"
] | [
"GO:0098648"
] | [
"GO:0098648",
"GO:0140158",
"GO:0140392"
] | [] | [] | [] | [] | [] | [] | null | null | false | true | 8 |
GO:0005591 | 5,591 | collagen type VIII trimer | cellular_component | A collagen heterotrimer containing type VIII alpha chains; [alpha1(VIII)2]alpha2(VIII) and alpha1(VIII)[alpha2(VIII)]2 trimers have been observed; type VIII collagen triple helices associate to form regular hexagonal nets. | [
"PMID:21421911"
] | null | [] | [] | [] | [] | [] | [
"GO:0098642"
] | [
"part_of GO:0098646"
] | [
"part_of"
] | [
"GO:0098646"
] | [
"GO:0098642",
"GO:0098646"
] | [] | [] | [] | [] | [] | [
"term_tracker_item \"https://github.com/geneontology/go-ontology/issues/30148\" xsd:anyURI",
"term_tracker_item \"https://github.com/geneontology/go-ontology/issues/31070\" xsd:anyURI"
] | null | null | false | true | 4 |
GO:0005592 | 5,592 | collagen type XI trimer | cellular_component | A collagen heterotrimer containing type XI and type II alpha chains in alpha1(XI) alpha2(XI) alpha1(II) trimers; type XI collagen triple helices associate to form fibrils. | [
"PMID:7642541"
] | null | [] | [] | [] | [] | [] | [
"GO:0005583"
] | [] | [] | [] | [
"GO:0005583"
] | [] | [] | [] | [] | [] | [
"term_tracker_item \"https://github.com/geneontology/go-ontology/issues/30122\" xsd:anyURI"
] | null | null | false | true | 3 |
GO:0005593 | 5,593 | FACIT collagen trimer | cellular_component | A collagen trimer that associates with collagen fibrils and consists of collagen monomers that contain two or more relatively short triple-helical domains connected by non-triple-helical sequences. | [
"PMID:21421911"
] | The acronym FACIT stands for fibril-associated collagen with interrupted triple helix. | [] | [] | [] | [] | [
"Wikipedia:FACIT_collagen"
] | [
"GO:0005581",
"GO:0140392"
] | [
"part_of GO:0140153"
] | [
"part_of"
] | [
"GO:0140153"
] | [
"GO:0005581",
"GO:0140153",
"GO:0140392"
] | [] | [] | [] | [] | [] | [] | null | null | false | true | 7 |
GO:0005594 | 5,594 | collagen type IX trimer | cellular_component | A collagen heterotrimer containing type IX alpha chains in alpha1(IX)alpha2(IX)alpha3(IX) trimers; type IX collagen triple helices associate to form a structure that links glycosaminoglycans to type II collagen fibrils. | [
"PMID:21421911"
] | null | [] | [] | [] | [] | [] | [
"GO:0005593"
] | [] | [] | [] | [
"GO:0005593"
] | [] | [] | [] | [] | [] | [] | null | null | false | true | 6 |
GO:0005595 | 5,595 | collagen type XII trimer | cellular_component | A collagen homotrimer of alpha1(XII) chains; type XII collagen triple helices may link sheet-forming or fibrillar collagens to other structures. | [
"PMID:21421911"
] | null | [] | [] | [] | [] | [] | [
"GO:0005593"
] | [] | [] | [] | [
"GO:0005593"
] | [] | [] | [] | [] | [] | [] | null | null | false | true | 9 |
GO:0005596 | 5,596 | collagen type XIV trimer | cellular_component | A collagen homotrimer of alpha1(XIV) chains; type XIV collagen triple helices may link sheet-forming or fibrillar collagens to other structures. | [
"PMID:21421911"
] | null | [] | [] | [] | [] | [] | [
"GO:0005593"
] | [] | [] | [] | [
"GO:0005593"
] | [] | [] | [] | [] | [] | [] | null | null | false | true | 7 |
GO:0005597 | 5,597 | collagen type XVI trimer | cellular_component | A collagen trimer containing alpha(XVI) chains; type XVI trimers can associate with microfibrils. | [
"PMID:12782140"
] | null | [] | [] | [] | [] | [] | [
"GO:0005593"
] | [] | [] | [] | [
"GO:0005593"
] | [] | [] | [] | [] | [] | [] | null | null | false | true | 8 |
GO:0005598 | 5,598 | obsolete short-chain collagen trimer | cellular_component | OBSOLETE. Any collagen trimer that does not form fibrils and that is relatively short compared to the collagen trimers that do form fibrils. | [
"ISBN:0198599587"
] | This term was obsoleted because it was an unnecessary grouping term. | [] | [] | [] | [] | [] | [] | [] | [] | [] | [] | [] | [] | [] | [] | [
"GO:0005591",
"GO:0005599"
] | [
"term_tracker_item \"https://github.com/geneontology/go-ontology/issues/29485\" xsd:anyURI"
] | null | null | true | true | 1 |
GO:0005599 | 5,599 | collagen type X trimer | cellular_component | A collagen homotrimer of alpha1(X) chains; type X collagen triple helices form hexagonal networks (sheets). | [
"PMID:21421911"
] | Collagen X trimers have been observed to form hexagonal lattices in vitro, but in vivo they have been found in a fibril associated form (PMID:19693541). | [] | [] | [] | [] | [] | [
"GO:0098642"
] | [
"part_of GO:0098646"
] | [
"part_of"
] | [
"GO:0098646"
] | [
"GO:0098642",
"GO:0098646"
] | [] | [] | [] | [] | [] | [
"term_tracker_item \"https://github.com/geneontology/go-ontology/issues/29415\" xsd:anyURI"
] | null | null | false | true | 8 |
GO:0005601 | 5,601 | classical-complement-pathway C3/C5 convertase complex | cellular_component | A heterodimeric protein complex that catalyzes the cleavage of complement components C3 and C5, and acts in the classical pathway of complement activation; consists of one monomer of C2a and one monomer of C4b; C2a is the catalytic subunit, but cannot catalyze cleavage alone. | [
"GOC:mah"
] | null | [] | [] | [] | [] | [] | [
"GO:0140392",
"GO:1902494"
] | [] | [] | [] | [
"GO:0140392",
"GO:1902494"
] | [] | [] | [] | [] | [] | [] | null | null | false | true | 1 |
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