Datasets:
LiteFold
/
GO

Dataset card Data Studio Files
xet
 Community
go_id
string
go_numeric_id
int64
name
string
namespace
string
definition
string
definition_xrefs
list
comment
string
synonyms
list
synonym_scopes
list
alt_ids
list
subsets
list
xrefs
list
is_a_ids
list
relationship_edges
list
relationship_types
list
relationship_target_ids
list
parent_ids
list
intersection_of
list
union_of
list
disjoint_from
list
replaced_by
list
consider
list
property_values
list
created_by
string
creation_date
string
is_obsolete
bool
in_go_basic
bool
split_bucket
int64
GO:0005986
5,986
sucrose biosynthetic process
biological_process
The chemical reactions and pathways resulting in the formation of sucrose, the disaccharide fructofuranosyl-glucopyranoside.
[ "GOC:curators" ]
null
[ "sucrose anabolism", "sucrose biosynthesis", "sucrose formation", "sucrose synthesis" ]
[ "EXACT", "EXACT", "EXACT", "EXACT" ]
[]
[]
[ "MetaCyc:PWY-7238", "MetaCyc:PWY-7347", "MetaCyc:SUCSYN-PWY" ]
[ "GO:0005985", "GO:0046351" ]
[]
[]
[]
[ "GO:0005985", "GO:0046351" ]
[]
[]
[]
[]
[]
[ "skos:narrowMatch MetaCyc:PWY-7238", "skos:narrowMatch MetaCyc:PWY-7347", "skos:narrowMatch MetaCyc:SUCSYN-PWY", "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/31634\" xsd:anyURI" ]
null
null
false
true
4
GO:0005987
5,987
sucrose catabolic process
biological_process
The chemical reactions and pathways resulting in the breakdown of sucrose, the disaccharide fructofuranosyl-glucopyranoside.
[ "GOC:curators" ]
null
[ "sucrose breakdown", "sucrose catabolism", "sucrose degradation" ]
[ "EXACT", "EXACT", "EXACT" ]
[]
[]
[]
[ "GO:0005985", "GO:0046352" ]
[]
[]
[]
[ "GO:0005985", "GO:0046352" ]
[]
[]
[]
[]
[]
[]
null
null
false
true
5
GO:0005988
5,988
lactose metabolic process
biological_process
The chemical reactions and pathways involving lactose, the disaccharide galactopyranosyl-glucose.
[ "GOC:curators" ]
null
[ "lactose metabolism" ]
[ "EXACT" ]
[]
[]
[]
[ "GO:0005984" ]
[]
[]
[]
[ "GO:0005984" ]
[]
[]
[]
[]
[]
[]
null
null
false
true
6
GO:0005989
5,989
lactose biosynthetic process
biological_process
The chemical reactions and pathways resulting in the formation of lactose, the disaccharide galactopyranosyl-glucose.
[ "GOC:curators" ]
null
[ "lactose anabolism", "lactose biosynthesis", "lactose formation", "lactose synthesis" ]
[ "EXACT", "EXACT", "EXACT", "EXACT" ]
[]
[]
[ "Reactome:R-HSA-5653890 \"Lactose synthesis\"" ]
[ "GO:0005988", "GO:0046351" ]
[]
[]
[]
[ "GO:0005988", "GO:0046351" ]
[]
[]
[]
[]
[]
[]
null
null
false
true
2
GO:0005990
5,990
lactose catabolic process
biological_process
The chemical reactions and pathways resulting in the breakdown of lactose, the disaccharide galactopyranosyl-glucose.
[ "GOC:curators" ]
null
[ "lactose breakdown", "lactose catabolism", "lactose degradation" ]
[ "EXACT", "EXACT", "EXACT" ]
[]
[]
[ "MetaCyc:BGALACT-PWY" ]
[ "GO:0005988", "GO:0046352" ]
[]
[]
[]
[ "GO:0005988", "GO:0046352" ]
[]
[]
[]
[]
[]
[ "skos:narrowMatch MetaCyc:BGALACT-PWY", "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/31587\" xsd:anyURI" ]
null
null
false
true
2
GO:0005991
5,991
trehalose metabolic process
biological_process
The chemical reactions and pathways involving trehalose, a disaccharide that consists of two molecules of glucose and is isomeric with sucrose.
[ "GOC:jl", "ISBN:0028623819" ]
null
[ "mycose metabolic process", "mycose metabolism", "mykose metabolic process", "mykose metabolism", "trehalose metabolism" ]
[ "EXACT", "EXACT", "EXACT", "EXACT", "EXACT" ]
[]
[]
[]
[ "GO:0005984" ]
[]
[]
[]
[ "GO:0005984" ]
[]
[]
[]
[]
[]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/27111\" xsd:anyURI" ]
null
null
false
true
2
GO:0005993
5,993
trehalose catabolic process
biological_process
The chemical reactions and pathways resulting in the breakdown of trehalose, a disaccharide that consists of two molecules of glucose and is isomeric with sucrose.
[ "GOC:jl", "ISBN:0028623819" ]
null
[ "mycose catabolic process", "mycose catabolism", "mykose catabolic process", "mykose catabolism", "trehalose breakdown", "trehalose catabolism", "trehalose degradation" ]
[ "EXACT", "EXACT", "EXACT", "EXACT", "EXACT", "EXACT", "EXACT" ]
[]
[]
[ "MetaCyc:PWY-2721", "MetaCyc:PWY-2722", "MetaCyc:PWY-2723", "MetaCyc:PWY0-1182", "MetaCyc:PWY0-1466", "MetaCyc:TREDEGLOW-PWY" ]
[ "GO:0005991", "GO:0046352" ]
[]
[]
[]
[ "GO:0005991", "GO:0046352" ]
[]
[]
[]
[]
[]
[ "skos:narrowMatch MetaCyc:PWY-2721", "skos:narrowMatch MetaCyc:PWY-2722", "skos:narrowMatch MetaCyc:PWY-2723", "skos:narrowMatch MetaCyc:PWY0-1182", "skos:narrowMatch MetaCyc:PWY0-1466", "skos:narrowMatch MetaCyc:TREDEGLOW-PWY", "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/270...
null
null
false
true
5
GO:0005994
5,994
obsolete melibiose metabolic process
biological_process
OBSOLETE. The chemical reactions and pathways involving melibiose, the disaccharide 6-O-alpha-D-galactopyranosyl-D-glucose.
[ "ISBN:0198547684" ]
This term was obsoleted because it is an unnecessary grouping class.
[ "melibiose metabolism" ]
[ "EXACT" ]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/30524\" xsd:anyURI" ]
null
null
true
true
7
GO:0005995
5,995
melibiose catabolic process
biological_process
The chemical reactions and pathways resulting in the breakdown of melibiose, the disaccharide 6-O-alpha-D-galactopyranosyl-D-glucose.
[ "ISBN:0198547684" ]
null
[ "melibiose breakdown", "melibiose catabolism", "melibiose degradation" ]
[ "EXACT", "EXACT", "EXACT" ]
[]
[]
[]
[ "GO:0046352" ]
[]
[]
[]
[ "GO:0046352" ]
[]
[]
[]
[]
[]
[]
null
null
false
true
7
GO:0005997
5,997
xylulose metabolic process
biological_process
The chemical reactions and pathways involving xylulose, the ketopentose threo-2-pentulose.
[ "ISBN:0198547684" ]
null
[ "xylulose metabolism" ]
[ "EXACT" ]
[]
[]
[]
[ "GO:0019321" ]
[]
[]
[]
[ "GO:0019321" ]
[]
[]
[]
[]
[]
[]
null
null
false
true
1
GO:0005998
5,998
xylulose catabolic process
biological_process
The chemical reactions and pathways resulting in the breakdown of xylulose, the ketopentose threo-2-pentulose.
[ "ISBN:0198547684" ]
null
[ "xylulose breakdown", "xylulose catabolism", "xylulose degradation" ]
[ "EXACT", "EXACT", "EXACT" ]
[]
[]
[]
[ "GO:0005997", "GO:0019323" ]
[]
[]
[]
[ "GO:0005997", "GO:0019323" ]
[]
[]
[]
[]
[]
[]
null
null
false
true
5
GO:0005999
5,999
xylulose biosynthetic process
biological_process
The chemical reactions and pathways resulting in the formation of xylulose, the ketopentose threo-2-pentulose.
[ "ISBN:0198547684" ]
null
[ "xylulose anabolism", "xylulose biosynthesis", "xylulose formation", "xylulose synthesis" ]
[ "EXACT", "EXACT", "EXACT", "EXACT" ]
[]
[]
[ "Reactome:R-HSA-163754 \"Insulin effects increased synthesis of Xylulose-5-Phosphate\"" ]
[ "GO:0005997", "GO:0019322" ]
[]
[]
[]
[ "GO:0005997", "GO:0019322" ]
[]
[]
[]
[]
[]
[]
null
null
false
true
6
GO:0006000
6,000
fructose metabolic process
biological_process
The chemical reactions and pathways involving fructose, the ketohexose arabino-2-hexulose. Fructose exists in a open chain form or as a ring compound. D-fructose is the sweetest of the sugars and is found free in a large number of fruits and honey.
[ "ISBN:0198506732" ]
null
[ "fructose metabolism" ]
[ "EXACT" ]
[]
[]
[ "Reactome:R-HSA-5652084 \"Fructose metabolism\"", "Wikipedia:Fructose" ]
[ "GO:0019318" ]
[]
[]
[]
[ "GO:0019318" ]
[]
[]
[]
[]
[]
[]
null
null
false
true
6
GO:0006001
6,001
fructose catabolic process
biological_process
The chemical reactions and pathways resulting in the breakdown of fructose, the ketohexose arabino-2-hexulose.
[ "GOC:ai" ]
null
[ "fructose breakdown", "fructose catabolism", "fructose degradation" ]
[ "EXACT", "EXACT", "EXACT" ]
[]
[]
[]
[ "GO:0006000", "GO:0019320" ]
[]
[]
[]
[ "GO:0006000", "GO:0019320" ]
[]
[]
[]
[]
[]
[]
null
null
false
true
4
GO:0006002
6,002
fructose 6-phosphate metabolic process
biological_process
The chemical reactions and pathways involving fructose 6-phosphate, also known as F6P. The D-enantiomer is an important intermediate in glycolysis, gluconeogenesis, and fructose metabolism.
[ "ISBN:0198506732" ]
null
[ "fructose 6-phosphate metabolism" ]
[ "EXACT" ]
[]
[]
[]
[ "GO:0006796", "GO:0019637", "GO:1901135" ]
[]
[]
[]
[ "GO:0006796", "GO:0019637", "GO:1901135" ]
[]
[]
[]
[]
[]
[]
null
null
false
true
9
GO:0006003
6,003
fructose 2,6-bisphosphate metabolic process
biological_process
The chemical reactions and pathways involving fructose 2,6-bisphosphate. The D enantiomer is an important regulator of the glycolytic and gluconeogenic pathways. It inhibits fructose 1,6-bisphosphatase and activates phosphofructokinase.
[ "ISBN:0198506732" ]
null
[ "fructose 2,6-bisphosphate metabolism" ]
[ "EXACT" ]
[]
[]
[]
[ "GO:0006796", "GO:0019637", "GO:1901135" ]
[]
[]
[]
[ "GO:0006796", "GO:0019637", "GO:1901135" ]
[]
[]
[]
[]
[]
[]
null
null
false
true
4
GO:0006004
6,004
fucose metabolic process
biological_process
The chemical reactions and pathways involving fucose, or 6-deoxygalactose, which has two enantiomers, D-fucose and L-fucose.
[ "ISBN:0198506732" ]
null
[ "fucose metabolism" ]
[ "EXACT" ]
[]
[]
[]
[ "GO:0019318" ]
[]
[]
[]
[ "GO:0019318" ]
[]
[]
[]
[]
[]
[]
null
null
false
true
1
GO:0006005
6,005
L-fucose biosynthetic process
biological_process
The chemical reactions and pathways resulting in the formation of L-fucose (6-deoxy-L-galactose).
[ "GOC:jl" ]
null
[ "L-fucose anabolism", "L-fucose biosynthesis", "L-fucose formation", "L-fucose synthesis" ]
[ "EXACT", "EXACT", "EXACT", "EXACT" ]
[]
[]
[]
[ "GO:0042353", "GO:0042354" ]
[]
[]
[]
[ "GO:0042353", "GO:0042354" ]
[]
[]
[]
[]
[]
[]
null
null
false
true
1
GO:0006006
6,006
glucose metabolic process
biological_process
The chemical reactions and pathways involving glucose, the aldohexose gluco-hexose. D-glucose is dextrorotatory and is sometimes known as dextrose; it is an important source of energy for living organisms and is found free as well as combined in homo- and hetero-oligosaccharides and polysaccharides.
[ "ISBN:0198506732" ]
null
[ "cellular glucose metabolic process", "glucose metabolism" ]
[ "EXACT", "EXACT" ]
[]
[]
[ "Reactome:R-HSA-70326 \"Glucose metabolism\"" ]
[ "GO:0019318" ]
[]
[]
[]
[ "GO:0019318" ]
[]
[]
[]
[]
[]
[]
null
null
false
true
9
GO:0006007
6,007
glucose catabolic process
biological_process
The chemical reactions and pathways resulting in the breakdown of glucose, the aldohexose gluco-hexose.
[ "GOC:ai" ]
null
[ "glucose breakdown", "glucose catabolism", "glucose degradation" ]
[ "EXACT", "EXACT", "EXACT" ]
[]
[]
[]
[ "GO:0006006", "GO:0019320" ]
[]
[]
[]
[ "GO:0006006", "GO:0019320" ]
[]
[]
[]
[]
[]
[]
null
null
false
true
7
GO:0006009
6,009
glucose 1-phosphate phosphorylation
biological_process
The process of introducing a phosphate group into glucose 1-phosphate to produce glucose bisphosphate.
[ "GOC:ai" ]
null
[]
[]
[]
[]
[]
[ "GO:0016310", "GO:0019255" ]
[]
[]
[]
[ "GO:0016310", "GO:0019255" ]
[]
[]
[]
[]
[]
[]
null
null
false
true
1
GO:0006011
6,011
UDP-alpha-D-glucose metabolic process
biological_process
The chemical reactions and pathways involving UDP-alpha-D-glucose, a substance composed of alpha-D-glucose in glycosidic linkage with uridine diphosphate.
[ "GOC:ai" ]
null
[ "UDP-glucose metabolism" ]
[ "EXACT" ]
[]
[]
[]
[ "GO:0009225" ]
[]
[]
[]
[ "GO:0009225" ]
[]
[]
[]
[]
[]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/28951\" xsd:anyURI" ]
null
null
false
true
4
GO:0006012
6,012
galactose metabolic process
biological_process
The chemical reactions and pathways involving galactose, the aldohexose galacto-hexose. D-galactose is widely distributed in combined form in plants, animals and microorganisms as a constituent of oligo- and polysaccharides; it also occurs in galactolipids and as its glucoside in lactose and melibiose.
[ "ISBN:0198506732" ]
null
[ "galactose metabolism" ]
[ "EXACT" ]
[]
[]
[ "Wikipedia:Galactose" ]
[ "GO:0019318" ]
[]
[]
[]
[ "GO:0019318" ]
[]
[]
[]
[]
[]
[]
null
null
false
true
8
GO:0006013
6,013
mannose metabolic process
biological_process
The chemical reactions and pathways involving mannose, the aldohexose manno-hexose, the C-2 epimer of glucose. The D-(+)-form is widely distributed in mannans and hemicelluloses and is of major importance in the core oligosaccharide of N-linked oligosaccharides of glycoproteins.
[ "ISBN:0198506732" ]
null
[ "mannose metabolism" ]
[ "EXACT" ]
[]
[]
[]
[ "GO:0019318" ]
[]
[]
[]
[ "GO:0019318" ]
[]
[]
[]
[]
[]
[]
null
null
false
true
4
GO:0006014
6,014
D-ribose metabolic process
biological_process
The chemical reactions and pathways involving D-ribose (ribo-pentose). As beta-D-ribofuranose, D-ribose forms the glycose group of all ribonucleosides, ribonucleotides and ribonucleic acids, and also of ribose phosphates, various glycosides, some coenzymes and some forms of vitamin B12.
[ "ISBN:0198506732" ]
null
[ "D-ribose metabolism" ]
[ "EXACT" ]
[]
[]
[]
[ "GO:0019321" ]
[]
[]
[]
[ "GO:0019321" ]
[]
[]
[]
[]
[]
[]
null
null
false
true
7
GO:0006015
6,015
5-phosphoribose 1-diphosphate biosynthetic process
biological_process
The chemical reactions and pathways resulting in the formation of 5-phosphoribose 1-diphosphate, also known as 5-phosphoribosyl-1-pyrophosphate.
[ "GOC:ai" ]
null
[ "5-phosphoribose 1-diphosphate anabolism", "5-phosphoribose 1-diphosphate biosynthesis", "5-phosphoribose 1-diphosphate formation", "5-phosphoribose 1-diphosphate synthesis", "5-phosphoribosyl-1-pyrophosphate biosynthesis", "5-phosphoribosyl-1-pyrophosphate biosynthetic process", "PRPP biosynthetic proc...
[ "EXACT", "EXACT", "EXACT", "EXACT", "EXACT", "EXACT", "EXACT" ]
[]
[]
[ "MetaCyc:PWY0-662", "Reactome:R-HSA-73843 \"5-Phosphoribose 1-diphosphate biosynthesis\"" ]
[ "GO:0046390", "GO:0046391" ]
[]
[]
[]
[ "GO:0046390", "GO:0046391" ]
[]
[]
[]
[]
[]
[ "skos:narrowMatch MetaCyc:PWY0-662", "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/31587\" xsd:anyURI" ]
null
null
false
true
3
GO:0006016
6,016
2-deoxyribose 1-phosphate biosynthetic process
biological_process
The chemical reactions and pathways resulting in the formation of 2-deoxyribose 1-phosphate, the phosphorylated sugar 1-phospho-2-deoxyribose.
[ "ISBN:0198506732" ]
null
[ "2-deoxyribose 1-phosphate anabolism", "2-deoxyribose 1-phosphate biosynthesis", "2-deoxyribose 1-phosphate formation", "2-deoxyribose 1-phosphate synthesis" ]
[ "EXACT", "EXACT", "EXACT", "EXACT" ]
[]
[]
[]
[ "GO:0046385" ]
[]
[]
[]
[ "GO:0046385" ]
[]
[]
[]
[]
[]
[]
null
null
false
true
7
GO:0006018
6,018
2-deoxyribose 1-phosphate catabolic process
biological_process
The chemical reactions and pathways resulting in the breakdown of deoxyribose 1-phosphate, the phosphorylated sugar 1-phospho-2-deoxyribose.
[ "GOC:ai" ]
null
[ "2-deoxyribose 1-phosphate breakdown", "2-deoxyribose 1-phosphate catabolism", "2-deoxyribose 1-phosphate degradation", "deoxyribose 1-phosphate catabolic process" ]
[ "EXACT", "EXACT", "EXACT", "EXACT" ]
[]
[]
[]
[ "GO:0046386" ]
[]
[]
[]
[ "GO:0046386" ]
[]
[]
[]
[]
[]
[]
null
null
false
true
2
GO:0006019
6,019
obsolete deoxyribose 5-phosphate phosphorylation
biological_process
OBSOLETE. The process of introducing a phosphate group into deoxyribose 5-phosphate to produce deoxyribose bisphosphate.
[ "GOC:ai" ]
This term was obsoleted because it is an unnecessary grouping term.
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/30524\" xsd:anyURI" ]
null
null
true
true
7
GO:0006021
6,021
inositol biosynthetic process
biological_process
The chemical reactions and pathways resulting in the formation of inositol, 1,2,3,4,5,6-cyclohexanehexol, a growth factor for animals and microorganisms.
[ "ISBN:0198547684" ]
null
[ "inositol anabolism", "inositol biosynthesis", "inositol formation", "inositol synthesis", "myo-inositol biosynthesis", "myo-inositol biosynthetic process", "vitamin Bh biosynthesis", "vitamin Bh biosynthetic process" ]
[ "EXACT", "EXACT", "EXACT", "EXACT", "NARROW", "NARROW", "EXACT", "EXACT" ]
[]
[]
[]
[ "GO:0006020", "GO:0046173" ]
[]
[]
[]
[ "GO:0006020", "GO:0046173" ]
[]
[]
[]
[]
[]
[]
null
null
false
true
5
GO:0006022
6,022
aminoglycan metabolic process
biological_process
The chemical reactions and pathways involving aminoglycans, any polymer containing amino groups that consists of more than about 10 monosaccharide residues joined to each other by glycosidic linkages.
[ "GOC:ai", "ISBN:0198506732" ]
null
[ "aminoglycan metabolism" ]
[ "EXACT" ]
[]
[]
[]
[ "GO:0043170", "GO:1901135" ]
[]
[]
[]
[ "GO:0043170", "GO:1901135" ]
[]
[]
[]
[]
[]
[]
null
null
false
true
8
GO:0006023
6,023
aminoglycan biosynthetic process
biological_process
The chemical reactions and pathways resulting in the formation of aminoglycans, any polymer containing amino groups that consists of more than about 10 monosaccharide residues joined to each other by glycosidic linkages.
[ "GOC:ai", "ISBN:0198506732" ]
null
[ "aminoglycan anabolism", "aminoglycan biosynthesis", "aminoglycan formation", "aminoglycan synthesis" ]
[ "EXACT", "EXACT", "EXACT", "EXACT" ]
[]
[]
[]
[ "GO:0006022", "GO:0009059", "GO:1901137" ]
[]
[]
[]
[ "GO:0006022", "GO:0009059", "GO:1901137" ]
[]
[]
[]
[]
[]
[]
null
null
false
true
2
GO:0006024
6,024
glycosaminoglycan biosynthetic process
biological_process
The chemical reactions and pathways resulting in the formation of glycosaminoglycans, any one of a group of linear polysaccharides composed of repeating disaccharide units.
[ "PMID:38500384" ]
null
[ "glycosaminoglycan anabolism", "glycosaminoglycan biosynthesis", "glycosaminoglycan formation", "glycosaminoglycan synthesis" ]
[ "EXACT", "EXACT", "EXACT", "EXACT" ]
[]
[]
[]
[ "GO:0006023", "GO:0030203" ]
[]
[]
[]
[ "GO:0006023", "GO:0030203" ]
[]
[]
[]
[]
[]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/29745\" xsd:anyURI" ]
null
null
false
true
9
GO:0006025
6,025
obsolete galactosaminoglycan biosynthetic process
biological_process
OBSOLETE. The chemical reactions and pathways resulting in the formation of galactosaminoglycans, any of a group of polysaccharides that contain amino sugars derived from the galactose.
[ "GOC:ai" ]
This term was obsoleted because it was too broad.
[ "galactosaminoglycan anabolism", "galactosaminoglycan biosynthesis", "galactosaminoglycan formation", "galactosaminoglycan synthesis" ]
[ "EXACT", "EXACT", "EXACT", "EXACT" ]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/29263\" xsd:anyURI" ]
null
null
true
true
4
GO:0006026
6,026
aminoglycan catabolic process
biological_process
The chemical reactions and pathways resulting in the breakdown of aminoglycans, any polymer containing amino groups that consists of more than about 10 monosaccharide residues joined to each other by glycosidic linkages.
[ "GOC:ai", "ISBN:0198506732" ]
null
[ "aminoglycan breakdown", "aminoglycan catabolism", "aminoglycan degradation" ]
[ "EXACT", "EXACT", "EXACT" ]
[]
[]
[]
[ "GO:0006022", "GO:0009057", "GO:1901136" ]
[]
[]
[]
[ "GO:0006022", "GO:0009057", "GO:1901136" ]
[]
[]
[]
[]
[]
[]
null
null
false
true
5
GO:0006027
6,027
glycosaminoglycan catabolic process
biological_process
The chemical reactions and pathways resulting in the breakdown of glycosaminoglycans, any one of a group of linear polysaccharides composed of repeating disaccharide units.
[ "PMID:38500384" ]
null
[ "glycosaminoglycan breakdown", "glycosaminoglycan catabolism", "glycosaminoglycan degradation" ]
[ "EXACT", "EXACT", "EXACT" ]
[]
[]
[]
[ "GO:0006026", "GO:0030203" ]
[]
[]
[]
[ "GO:0006026", "GO:0030203" ]
[]
[]
[]
[]
[]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/29745\" xsd:anyURI" ]
null
null
false
true
7
GO:0006028
6,028
obsolete galactosaminoglycan catabolic process
biological_process
OBSOLETE. The chemical reactions and pathways resulting in the breakdown of galactosaminoglycans, any of a group of polysaccharides that contain amino sugars derived from the galactose.
[ "GOC:ai" ]
This term was obsoleted because it was too broad.
[ "galactosaminoglycan breakdown", "galactosaminoglycan catabolism", "galactosaminoglycan degradation" ]
[ "EXACT", "EXACT", "EXACT" ]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/29263\" xsd:anyURI" ]
null
null
true
true
8
GO:0006029
6,029
proteoglycan metabolic process
biological_process
The chemical reactions and pathways involving proteoglycans, any glycoprotein in which the carbohydrate units are glycosaminoglycans.
[ "PMID:35536939" ]
null
[ "proteoglycan metabolism", "proteoglycan sulfate transfer" ]
[ "EXACT", "NARROW" ]
[]
[]
[ "Reactome:R-HSA-1793185 \"Chondroitin sulfate/dermatan sulfate metabolism\"" ]
[ "GO:0009100" ]
[]
[]
[]
[ "GO:0009100" ]
[]
[]
[]
[]
[]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/29745\" xsd:anyURI" ]
null
null
false
true
4
GO:0006031
6,031
chitin biosynthetic process
biological_process
The chemical reactions and pathways resulting in the formation of chitin, a linear polysaccharide consisting of beta-(1->4)-linked N-acetyl-D-glucosamine residues.
[ "GOC:jl", "ISBN:0198506732" ]
null
[ "beta-1,4-linked N-acetylglucosamine biosynthesis", "beta-1,4-linked N-acetylglucosamine biosynthetic process", "chitin anabolism", "chitin biosynthesis", "chitin formation", "chitin synthesis" ]
[ "EXACT", "EXACT", "EXACT", "EXACT", "EXACT", "EXACT" ]
[]
[]
[ "MetaCyc:PWY-6981" ]
[ "GO:0006023", "GO:0006030", "GO:1901073" ]
[]
[]
[]
[ "GO:0006023", "GO:0006030", "GO:1901073" ]
[]
[]
[]
[]
[]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/27107\" xsd:anyURI" ]
null
null
false
true
8
GO:0006032
6,032
chitin catabolic process
biological_process
The chemical reactions and pathways resulting in the breakdown of chitin, a linear polysaccharide consisting of beta-(1->4)-linked N-acetyl-D-glucosamine residues.
[ "GOC:jl", "ISBN:0198506732" ]
null
[ "beta-1,4-linked N-acetylglucosamine catabolic process", "beta-1,4-linked N-acetylglucosamine catabolism", "chitin breakdown", "chitin catabolism", "chitin degradation" ]
[ "EXACT", "EXACT", "EXACT", "EXACT", "EXACT" ]
[]
[]
[ "MetaCyc:PWY-6855", "MetaCyc:PWY-6902", "MetaCyc:PWY-7118", "MetaCyc:PWY-7822" ]
[ "GO:0006026", "GO:0006030", "GO:1901072" ]
[]
[]
[]
[ "GO:0006026", "GO:0006030", "GO:1901072" ]
[]
[]
[]
[]
[]
[ "skos:narrowMatch MetaCyc:PWY-6855", "skos:narrowMatch MetaCyc:PWY-6902", "skos:narrowMatch MetaCyc:PWY-7118", "skos:narrowMatch MetaCyc:PWY-7822", "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/27107\" xsd:anyURI", "term_tracker_item \"https://github.com/geneontology/go-ontology/...
null
null
false
true
9
GO:0006035
6,035
obsolete cuticle chitin biosynthetic process
biological_process
OBSOLETE. The chemical reactions and pathways resulting in the formation of cuticle chitin, a linear polysaccharide consisting of beta-(1->4)-linked N-acetyl-D-glucosamine residues, found in cuticles.
[ "GOC:ai" ]
The reason for obsoletion is that this^Cerm is mixing biological process and cellular component.
[ "cuticle chitin anabolism", "cuticle chitin biosynthesis", "cuticle chitin formation", "cuticle chitin synthesis" ]
[ "EXACT", "EXACT", "EXACT", "EXACT" ]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[ "GO:0006031" ]
[]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/27960\" xsd:anyURI" ]
null
null
true
true
7
GO:0006036
6,036
obsolete cuticle chitin catabolic process
biological_process
OBSOLETE. The chemical reactions and pathways resulting in the breakdown of cuticle chitin, a linear polysaccharide consisting of beta-(1->4)-linked N-acetyl-D-glucosamine residues, found in cuticles.
[ "GOC:ai" ]
The reason for obsoletion is that this^Cerm is mixing biological process and cellular component.
[ "cuticle chitin breakdown", "cuticle chitin catabolism", "cuticle chitin degradation" ]
[ "EXACT", "EXACT", "EXACT" ]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[ "GO:0006032" ]
[]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/27960\" xsd:anyURI" ]
null
null
true
true
1
GO:0006037
6,037
obsolete cell wall chitin metabolic process
biological_process
OBSOLETE. The chemical reactions and pathways involving cell wall chitin, a linear polysaccharide consisting of beta-(1->4)-linked N-acetyl-D-glucosamine residues, found in the walls of cells.
[ "GOC:ai" ]
The reason for obsoletion is that this^Cerm is mixing biological process and cellular component.
[ "cell wall chitin metabolism" ]
[ "EXACT" ]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[ "GO:0006030" ]
[]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/27960\" xsd:anyURI" ]
null
null
true
true
2
GO:0006038
6,038
obsolete cell wall chitin biosynthetic process
biological_process
OBSOLETE. The chemical reactions and pathways resulting in the formation of cell wall chitin, a linear polysaccharide consisting of beta-(1->4)-linked N-acetyl-D-glucosamine residues, found in the walls of cells.
[ "GOC:ai" ]
The reason for obsoletion is that this^Cerm is mixing biological process and cellular component.
[ "cell wall chitin anabolism", "cell wall chitin biosynthesis", "cell wall chitin formation", "cell wall chitin synthesis" ]
[ "EXACT", "EXACT", "EXACT", "EXACT" ]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[ "GO:0006031" ]
[]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/27960\" xsd:anyURI" ]
null
null
true
true
6
GO:0006039
6,039
obsolete cell wall chitin catabolic process
biological_process
OBSOLETE. The chemical reactions and pathways resulting in the breakdown of cell wall chitin, a linear polysaccharide consisting of beta-(1->4)-linked N-acetyl-D-glucosamine residues, found in the walls of cells.
[ "GOC:ai" ]
The reason for obsoletion is that this^Cerm is mixing biological process and cellular component.
[ "cell wall chitin breakdown", "cell wall chitin catabolism", "cell wall chitin degradation" ]
[ "EXACT", "EXACT", "EXACT" ]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[ "GO:0006032" ]
[]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/27960\" xsd:anyURI" ]
null
null
true
true
2
GO:0006040
6,040
amino sugar metabolic process
biological_process
The chemical reactions and pathways involving any amino sugar, sugars containing an amino group in place of a hydroxyl group.
[ "GOC:jl", "ISBN:0192801023" ]
null
[ "amino sugar metabolism", "aminosaccharide metabolic process", "aminosaccharide metabolism" ]
[ "EXACT", "EXACT", "EXACT" ]
[]
[]
[]
[ "GO:1901135" ]
[]
[]
[]
[ "GO:1901135" ]
[]
[]
[]
[]
[]
[]
null
null
false
true
7
GO:0006041
6,041
glucosamine metabolic process
biological_process
The chemical reactions and pathways involving glucosamine (2-amino-2-deoxyglucopyranose), an aminodeoxysugar that occurs in combined form in chitin.
[ "GOC:jl", "ISBN:0198506732" ]
null
[ "chitosamine metabolic process", "chitosamine metabolism", "glucosamine metabolism" ]
[ "EXACT", "EXACT", "EXACT" ]
[]
[]
[]
[ "GO:0006040" ]
[]
[]
[]
[ "GO:0006040" ]
[]
[]
[]
[]
[]
[]
null
null
false
true
7
GO:0006042
6,042
glucosamine biosynthetic process
biological_process
The chemical reactions and pathways resulting in the formation of glucosamine (2-amino-2-deoxyglucopyranose), an aminodeoxysugar that occurs in combined form in chitin.
[ "GOC:jl", "ISBN:0198506732" ]
null
[ "chitosamine biosynthesis", "chitosamine biosynthetic process", "glucosamine anabolism", "glucosamine biosynthesis", "glucosamine formation", "glucosamine synthesis" ]
[ "EXACT", "EXACT", "EXACT", "EXACT", "EXACT", "EXACT" ]
[]
[]
[]
[ "GO:0006041", "GO:1901073" ]
[]
[]
[]
[ "GO:0006041", "GO:1901073" ]
[]
[]
[]
[]
[]
[]
null
null
false
true
6
GO:0006043
6,043
glucosamine catabolic process
biological_process
The chemical reactions and pathways resulting in the breakdown of glucosamine (2-amino-2-deoxyglucopyranose), an aminodeoxysugar that occurs in combined form in chitin.
[ "GOC:jl", "ISBN:0198506732" ]
null
[ "chitosamine catabolic process", "chitosamine catabolism", "glucosamine breakdown", "glucosamine catabolism", "glucosamine degradation" ]
[ "EXACT", "EXACT", "EXACT", "EXACT", "EXACT" ]
[]
[]
[]
[ "GO:0006041", "GO:1901072" ]
[]
[]
[]
[ "GO:0006041", "GO:1901072" ]
[]
[]
[]
[]
[]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/28388\" xsd:anyURI" ]
null
null
false
true
3
GO:0006044
6,044
N-acetylglucosamine metabolic process
biological_process
The chemical reactions and pathways involving N-acetylglucosamine. The D isomer is a common structural unit of glycoproteins in plants, bacteria and animals; it is often the terminal sugar of an oligosaccharide group of a glycoprotein.
[ "ISBN:0198506732" ]
null
[ "N-acetylglucosamine metabolism" ]
[ "EXACT" ]
[]
[]
[]
[ "GO:0006040" ]
[]
[]
[]
[ "GO:0006040" ]
[]
[]
[]
[]
[]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/27059\" xsd:anyURI" ]
null
null
false
true
6
GO:0006046
6,046
N-acetylglucosamine catabolic process
biological_process
The chemical reactions and pathways resulting in the breakdown of N-acetylglucosamine. The D isomer is a common structural unit of glycoproteins in plants, bacteria and animals; it is often the terminal sugar of an oligosaccharide group of a glycoprotein.
[ "ISBN:0198506732" ]
null
[ "N-acetylglucosamine breakdown", "N-acetylglucosamine catabolism", "N-acetylglucosamine degradation" ]
[ "EXACT", "EXACT", "EXACT" ]
[]
[]
[ "MetaCyc:GLUAMCAT-PWY", "MetaCyc:PWY-6517" ]
[ "GO:0006044", "GO:1901072" ]
[]
[]
[]
[ "GO:0006044", "GO:1901072" ]
[]
[]
[]
[]
[]
[ "skos:narrowMatch MetaCyc:GLUAMCAT-PWY", "skos:narrowMatch MetaCyc:PWY-6517", "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/27059\" xsd:anyURI", "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/27107\" xsd:anyURI", "term_tracker_item \"https://github.com/gene...
null
null
false
true
3
GO:0006047
6,047
UDP-N-acetylglucosamine metabolic process
biological_process
The chemical reactions and pathways involving UDP-N-acetylglucosamine, a substance composed of N-acetylglucosamine, a common structural unit of oligosaccharides, in glycosidic linkage with uridine diphosphate.
[ "GOC:ai" ]
null
[ "UDP-N-acetylglucosamine metabolism" ]
[ "EXACT" ]
[]
[]
[]
[ "GO:0006040", "GO:0009225" ]
[]
[]
[]
[ "GO:0006040", "GO:0009225" ]
[]
[]
[]
[]
[]
[]
null
null
false
true
5
GO:0006048
6,048
UDP-N-acetylglucosamine biosynthetic process
biological_process
The chemical reactions and pathways resulting in the formation of UDP-N-acetylglucosamine, a substance composed of N-acetylglucosamine, a common structural unit of oligosaccharides, in glycosidic linkage with uridine diphosphate.
[ "GOC:ai" ]
null
[ "UDP-GlcNAc biosynthesis", "UDP-GlcNAc biosynthetic process", "UDP-N-acetylglucosamine anabolism", "UDP-N-acetylglucosamine biosynthesis", "UDP-N-acetylglucosamine formation", "UDP-N-acetylglucosamine synthesis" ]
[ "EXACT", "EXACT", "EXACT", "EXACT", "EXACT", "EXACT" ]
[]
[]
[ "MetaCyc:UDPNACETYLGALSYN-PWY", "MetaCyc:UDPNAGSYN-PWY", "Reactome:R-HSA-446210 \"Synthesis of UDP-N-acetyl-glucosamine\"" ]
[ "GO:0006047", "GO:0009226", "GO:0046349" ]
[]
[]
[]
[ "GO:0006047", "GO:0009226", "GO:0046349" ]
[]
[]
[]
[]
[]
[ "skos:narrowMatch MetaCyc:UDPNACETYLGALSYN-PWY", "skos:narrowMatch MetaCyc:UDPNAGSYN-PWY", "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/27107\" xsd:anyURI", "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/28527\" xsd:anyURI" ]
null
null
false
true
5
GO:0006049
6,049
obsolete UDP-N-acetylglucosamine catabolic process
biological_process
OBSOLETE. The chemical reactions and pathways resulting in the breakdown of UDP-N-acetylglucosamine, a substance composed of N-acetylglucosamine, a common structural unit of oligosaccharides, in glycosidic linkage with uridine diphosphate.
[ "GOC:ai" ]
The reason for obsoletion is that this term is not clearly defined.
[ "UDP-N-acetylglucosamine breakdown", "UDP-N-acetylglucosamine catabolism", "UDP-N-acetylglucosamine degradation" ]
[ "EXACT", "EXACT", "EXACT" ]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/30685\" xsd:anyURI" ]
null
null
true
true
4
GO:0006050
6,050
obsolete mannosamine metabolic process
biological_process
OBSOLETE. The chemical reactions and pathways involving mannosomine, 2-amino-2-deoxymannose; the D-isomer is a constituent of neuraminic acids as well as mucolipids and mucoproteins.
[ "GOC:curators" ]
This term was obsoleted because it is an unnecessary grouping class.
[ "mannosamine metabolism" ]
[ "EXACT" ]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/30524\" xsd:anyURI" ]
null
null
true
true
3
GO:0006051
6,051
N-acetylmannosamine metabolic process
biological_process
The chemical reactions and pathways involving N-acetylmannosamine, the acetylated derivative of mannosamine, 2-amino-2-deoxymannose.
[ "GOC:ai", "ISBN:0198506732" ]
null
[ "N-acetylmannosamine metabolism" ]
[ "EXACT" ]
[]
[]
[]
[ "GO:0006040" ]
[]
[]
[]
[ "GO:0006040" ]
[]
[]
[]
[]
[]
[]
null
null
false
true
5
GO:0006052
6,052
N-acetylmannosamine biosynthetic process
biological_process
The chemical reactions and pathways resulting in the formation of N-acetylmannosamine, the acetylated derivative of mannosamine, 2-amino-2-deoxymannose.
[ "GOC:ai", "ISBN:0198506732" ]
null
[ "N-acetylmannosamine anabolism", "N-acetylmannosamine biosynthesis", "N-acetylmannosamine formation", "N-acetylmannosamine synthesis" ]
[ "EXACT", "EXACT", "EXACT", "EXACT" ]
[]
[]
[]
[ "GO:0006051", "GO:0046347" ]
[]
[]
[]
[ "GO:0006051", "GO:0046347" ]
[]
[]
[]
[]
[]
[]
null
null
false
true
8
GO:0006053
6,053
N-acetylmannosamine catabolic process
biological_process
The chemical reactions and pathways resulting in the breakdown of N-acetylmannosamine, the acetylated derivative of mannosamine, 2-amino-2-deoxymannose.
[ "GOC:ai", "ISBN:0198506732" ]
null
[ "N-acetylmannosamine breakdown", "N-acetylmannosamine catabolism", "N-acetylmannosamine degradation" ]
[ "EXACT", "EXACT", "EXACT" ]
[]
[]
[]
[ "GO:0006051", "GO:0046346" ]
[]
[]
[]
[ "GO:0006051", "GO:0046346" ]
[]
[]
[]
[]
[]
[]
null
null
false
true
5
GO:0006054
6,054
N-acetylneuraminate metabolic process
biological_process
The chemical reactions and pathways involving N-acetylneuraminate, the anion of 5-(acetylamino)-3,5-dideoxy-D-glycero-D-galacto-non-3-ulosonic acid.
[ "ISBN:0198506732" ]
null
[ "N-acetylneuraminate metabolism", "sialic acid metabolic process", "sialic acid metabolism" ]
[ "EXACT", "BROAD", "BROAD" ]
[]
[]
[]
[ "GO:0006040", "GO:0019752" ]
[]
[]
[]
[ "GO:0006040", "GO:0019752" ]
[]
[]
[]
[]
[]
[]
null
null
false
true
8
GO:0006055
6,055
CMP-N-acetylneuraminate biosynthetic process
biological_process
The chemical reactions and pathways resulting in the formation of CMP-N-acetylneuraminate, a substance composed of 5-(acetylamino)-3,5-dideoxy-D-glycero-D-galacto-non-3-ulosonic acid in glycosidic linkage with cytidine monophosphate.
[ "GOC:ai" ]
null
[ "CMP-N-acetylneuraminate anabolism", "CMP-N-acetylneuraminate biosynthesis", "CMP-N-acetylneuraminate formation", "CMP-N-acetylneuraminate synthesis" ]
[ "EXACT", "EXACT", "EXACT", "EXACT" ]
[]
[]
[ "MetaCyc:PWY-6138", "MetaCyc:PWY-6139" ]
[ "GO:0009226", "GO:0046381" ]
[]
[]
[]
[ "GO:0009226", "GO:0046381" ]
[]
[]
[]
[]
[]
[ "skos:narrowMatch MetaCyc:PWY-6138", "skos:narrowMatch MetaCyc:PWY-6139", "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/28431\" xsd:anyURI", "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/28527\" xsd:anyURI" ]
null
null
false
true
3
GO:0006056
6,056
obsolete mannoprotein metabolic process
biological_process
OBSOLETE. The chemical reactions and pathways involving a mannoprotein, a protein that contains covalently bound mannose residues.
[ "ISBN:0198506732" ]
This term was obsoleted because it represents an unnecessary grouping term.
[ "mannoprotein metabolism" ]
[ "EXACT" ]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/30360\" xsd:anyURI" ]
null
null
true
true
7
GO:0006057
6,057
obsolete mannoprotein biosynthetic process
biological_process
OBSOLETE. The chemical reactions and pathways resulting in the formation of a mannoprotein, a protein that contains covalently bound mannose residues.
[ "ISBN:0198506732" ]
This term was obsoleted because it represents the same process as protein O-linked mannosylation ; GO:0035269.
[ "mannoprotein anabolism", "mannoprotein biosynthesis", "mannoprotein formation", "mannoprotein synthesis" ]
[ "EXACT", "EXACT", "EXACT", "EXACT" ]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[ "GO:0035269" ]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/30360\" xsd:anyURI" ]
null
null
true
true
6
GO:0006058
6,058
obsolete mannoprotein catabolic process
biological_process
OBSOLETE. The chemical reactions and pathways resulting in the breakdown of a mannoprotein, a protein that contains covalently bound mannose residues.
[ "ISBN:0198506732" ]
This term was obsoleted because there is no evidence that there is a specific pathway for degragation of mannosylated proteins.
[ "mannoprotein breakdown", "mannoprotein catabolism", "mannoprotein degradation" ]
[ "EXACT", "EXACT", "EXACT" ]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[ "GO:0030163" ]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/30360\" xsd:anyURI" ]
null
null
true
true
4
GO:0006059
6,059
hexitol metabolic process
biological_process
The chemical reactions and pathways involving hexitols, any alditol with a chain of six carbon atoms in the molecule.
[ "ISBN:0198506732" ]
null
[ "hexitol metabolism", "sugar alcohol (hexitol) metabolic process", "sugar alcohol (hexitol) metabolism" ]
[ "EXACT", "EXACT", "EXACT" ]
[]
[]
[]
[ "GO:0005975", "GO:0019751" ]
[]
[]
[]
[ "GO:0005975", "GO:0019751" ]
[]
[]
[]
[]
[]
[]
null
null
false
true
6
GO:0006060
6,060
D-sorbitol metabolic process
biological_process
The chemical reactions and pathways involving sorbitol (D-glucitol), one of the ten stereoisomeric hexitols. It can be derived from glucose by reduction of the aldehyde group.
[ "ISBN:0198506732" ]
null
[ "sorbitol metabolism" ]
[ "EXACT" ]
[]
[]
[]
[ "GO:0006059" ]
[]
[]
[]
[ "GO:0006059" ]
[]
[]
[]
[]
[]
[]
null
null
false
true
8
GO:0006061
6,061
D-sorbitol biosynthetic process
biological_process
The chemical reactions and pathways resulting in the formation of sorbitol (D-glucitol), one of the ten stereoisomeric hexitols. It can be derived from glucose by reduction of the aldehyde group.
[ "ISBN:0198506732" ]
null
[ "sorbitol anabolism", "sorbitol biosynthesis", "sorbitol formation", "sorbitol synthesis" ]
[ "EXACT", "EXACT", "EXACT", "EXACT" ]
[]
[]
[ "MetaCyc:PWY-5054", "MetaCyc:PWY-5530" ]
[ "GO:0006060", "GO:0019406" ]
[]
[]
[]
[ "GO:0006060", "GO:0019406" ]
[]
[]
[]
[]
[]
[ "skos:narrowMatch MetaCyc:PWY-5054", "skos:narrowMatch MetaCyc:PWY-5530" ]
null
null
false
true
7
GO:0006062
6,062
D-sorbitol catabolic process
biological_process
The chemical reactions and pathways resulting in the breakdown of sorbitol (D-glucitol), one of the ten stereoisomeric hexitols. It can be derived from glucose by reduction of the aldehyde group.
[ "ISBN:0198506732" ]
null
[ "sorbitol breakdown", "sorbitol catabolism", "sorbitol degradation" ]
[ "EXACT", "EXACT", "EXACT" ]
[]
[]
[ "MetaCyc:PWY-4101", "MetaCyc:SORBDEG-PWY" ]
[ "GO:0006060", "GO:0019407" ]
[]
[]
[]
[ "GO:0006060", "GO:0019407" ]
[]
[]
[]
[]
[]
[ "skos:narrowMatch MetaCyc:PWY-4101", "skos:narrowMatch MetaCyc:SORBDEG-PWY", "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/31634\" xsd:anyURI" ]
null
null
false
true
5
GO:0006063
6,063
obsolete uronic acid metabolic process
biological_process
OBSOLETE. The chemical reactions and pathways involving uronic acid, any monocarboxylic acid formally derived by oxidizing to a carboxyl group the terminal hydroxymethylene group of either an aldose with four or more carbon atoms in the molecule, or of any glycoside derived from such an aldose.
[ "ISBN:0198506732" ]
This term was obsoleted because it is an unnecessary grouping class.
[ "uronic acid metabolism" ]
[ "EXACT" ]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/30524\" xsd:anyURI" ]
null
null
true
true
7
GO:0006064
6,064
glucuronate catabolic process
biological_process
The chemical reactions and pathways resulting in the breakdown of glucuronate, any salt or ester of glucuronic acid.
[ "GOC:curators" ]
null
[ "glucuronate breakdown", "glucuronate catabolism", "glucuronate degradation" ]
[ "EXACT", "EXACT", "EXACT" ]
[]
[]
[]
[ "GO:0019585", "GO:0072329" ]
[]
[]
[]
[ "GO:0019585", "GO:0072329" ]
[]
[]
[]
[]
[]
[]
null
null
false
true
6
GO:0006065
6,065
UDP-glucuronate biosynthetic process
biological_process
The chemical reactions and pathways resulting in the formation of UDP-glucuronate, a substance composed of glucuronic acid in glycosidic linkage with uridine diphosphate.
[ "GOC:ai" ]
null
[ "UDP-glucuronate anabolism", "UDP-glucuronate biosynthesis", "UDP-glucuronate formation", "UDP-glucuronate synthesis" ]
[ "EXACT", "EXACT", "EXACT", "EXACT" ]
[]
[]
[ "MetaCyc:PWY-4841", "MetaCyc:PWY-7346" ]
[ "GO:0009226", "GO:0046394", "GO:0046398" ]
[]
[]
[]
[ "GO:0009226", "GO:0046394", "GO:0046398" ]
[]
[]
[]
[]
[]
[ "skos:narrowMatch MetaCyc:PWY-4841", "skos:narrowMatch MetaCyc:PWY-7346", "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/27107\" xsd:anyURI", "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/28527\" xsd:anyURI" ]
null
null
false
true
4
GO:0006066
6,066
alcohol metabolic process
biological_process
The chemical reactions and pathways involving alcohols, any of a class of compounds containing one or more hydroxyl groups attached to a saturated carbon atom.
[ "ISBN:0198506732" ]
null
[ "alcohol metabolism" ]
[ "EXACT" ]
[]
[ "gocheck_do_not_annotate", "goslim_drosophila", "goslim_pir" ]
[]
[ "GO:0044281" ]
[]
[]
[]
[ "GO:0044281" ]
[]
[]
[]
[]
[]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/31485\" xsd:anyURI" ]
null
null
false
true
9
GO:0006067
6,067
ethanol metabolic process
biological_process
The chemical reactions and pathways involving ethanol, CH3-CH2-OH, a colorless, water-miscible, flammable liquid produced by alcoholic fermentation.
[ "GOC:ai", "ISBN:0198506732" ]
null
[ "ethanol metabolism" ]
[ "EXACT" ]
[]
[]
[]
[ "GO:0034308" ]
[]
[]
[]
[ "GO:0034308" ]
[]
[]
[]
[]
[]
[]
null
null
false
true
5
GO:0006070
6,070
octanol metabolic process
biological_process
The chemical reactions and pathways involving octanol, the 8-carbon alcohol with the formula C8H17OH.
[ "GOC:curators" ]
null
[ "octanol metabolism" ]
[ "EXACT" ]
[]
[]
[]
[ "GO:0034308", "GO:1903173" ]
[]
[]
[]
[ "GO:0034308", "GO:1903173" ]
[]
[]
[]
[]
[]
[]
null
null
false
true
1
GO:0006071
6,071
glycerol metabolic process
biological_process
The chemical reactions and pathways involving glycerol, 1,2,3-propanetriol, a sweet, hygroscopic, viscous liquid, widely distributed in nature as a constituent of many lipids.
[ "GOC:ai", "ISBN:0198506732" ]
null
[ "glycerol metabolism" ]
[ "EXACT" ]
[]
[]
[]
[ "GO:0005975", "GO:0019751" ]
[]
[]
[]
[ "GO:0005975", "GO:0019751" ]
[]
[]
[]
[]
[]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/31634\" xsd:anyURI" ]
null
null
false
true
5
GO:0006072
6,072
glycerol-3-phosphate metabolic process
biological_process
The chemical reactions and pathways involving glycerol-3-phosphate, a phosphoric monoester of glycerol.
[ "GOC:curators", "ISBN:0198506732" ]
null
[ "glycerol-3-phosphate metabolism" ]
[ "EXACT" ]
[]
[]
[]
[ "GO:0052646" ]
[]
[]
[]
[ "GO:0052646" ]
[]
[]
[]
[]
[]
[]
null
null
false
true
5
GO:0006073
6,073
obsolete cellular glucan metabolic process
biological_process
OBSOLETE. The chemical reactions and pathways involving glucans, polysaccharides consisting only of glucose residues, occurring at the level of an individual cell.
[ "ISBN:0198547684" ]
This term was obsoleted because it is not different from its parent, glucan metabolic process ; GO:0044042.
[ "cellular glucan metabolism" ]
[ "EXACT" ]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[ "GO:0044042" ]
[]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/17904\" xsd:anyURI" ]
null
null
true
true
8
GO:0006074
6,074
(1->3)-beta-D-glucan metabolic process
biological_process
The chemical reactions and pathways involving (1->3)-beta-D-glucans, compounds composed of glucose residues linked by (1->3)-beta-D-glucosidic bonds.
[ "ISBN:0198506732" ]
null
[ "1,3-beta-D-glucan metabolic process", "1,3-beta-D-glucan metabolism", "1,3-beta-glucan metabolic process", "beta-1,3 glucan metabolic process", "beta-1,3 glucan metabolism" ]
[ "BROAD", "EXACT", "BROAD", "EXACT", "EXACT" ]
[]
[]
[]
[ "GO:0051273" ]
[]
[]
[]
[ "GO:0051273" ]
[]
[]
[]
[]
[]
[]
null
null
false
true
3
GO:0006075
6,075
(1->3)-beta-D-glucan biosynthetic process
biological_process
The chemical reactions and pathways resulting in the formation of (1->3)-beta-D-glucans, compounds composed of glucose residues linked by (1->3)-beta-D-glucosidic bonds.
[ "GOC:ai" ]
null
[ "1,3-beta-D-glucan biosynthetic process", "1,3-beta-glucan anabolism", "1,3-beta-glucan biosynthesis", "1,3-beta-glucan formation", "1,3-beta-glucan synthesis", "beta-1,3 glucan anabolism", "beta-1,3 glucan biosynthesis", "beta-1,3 glucan biosynthetic process", "beta-1,3 glucan formation", "beta-1...
[ "EXACT", "EXACT", "EXACT", "EXACT", "EXACT", "EXACT", "EXACT", "EXACT", "EXACT", "EXACT" ]
[]
[]
[]
[ "GO:0006074", "GO:0051274" ]
[]
[]
[]
[ "GO:0006074", "GO:0051274" ]
[]
[]
[]
[]
[]
[]
null
null
false
true
8
GO:0006076
6,076
(1->3)-beta-D-glucan catabolic process
biological_process
The chemical reactions and pathways resulting in the breakdown of (1->3)-beta-D-glucans.
[ "GOC:ai" ]
null
[ "1,3-beta-D-glucan catabolic process", "1,3-beta-glucan breakdown", "1,3-beta-glucan catabolism", "1,3-beta-glucan degradation", "beta-1,3 glucan breakdown", "beta-1,3 glucan catabolic process", "beta-1,3 glucan catabolism", "beta-1,3 glucan degradation" ]
[ "EXACT", "EXACT", "EXACT", "EXACT", "EXACT", "EXACT", "EXACT", "EXACT" ]
[]
[]
[]
[ "GO:0006074", "GO:0051275" ]
[]
[]
[]
[ "GO:0006074", "GO:0051275" ]
[]
[]
[]
[]
[]
[]
null
null
false
true
7
GO:0006077
6,077
(1->6)-beta-D-glucan metabolic process
biological_process
The chemical reactions and pathways involving (1->6)-beta-D-glucans, compounds composed of glucose residues linked by (1->6)-beta-D-glucosidic bonds.
[ "ISBN:0198506732" ]
null
[ "1,6-beta-glucan metabolic process", "1,6-beta-glucan metabolism", "beta-1,6 glucan metabolic process", "beta-1,6 glucan metabolism" ]
[ "EXACT", "EXACT", "EXACT", "EXACT" ]
[]
[]
[]
[ "GO:0051273" ]
[]
[]
[]
[ "GO:0051273" ]
[]
[]
[]
[]
[]
[]
null
null
false
true
4
GO:0006078
6,078
(1->6)-beta-D-glucan biosynthetic process
biological_process
The chemical reactions and pathways resulting in the formation of (1->6)-beta-D-glucans.
[ "GOC:ai" ]
null
[ "1,6-beta-glucan anabolism", "1,6-beta-glucan biosynthesis", "1,6-beta-glucan biosynthetic process", "1,6-beta-glucan formation", "1,6-beta-glucan synthesis", "beta-1,6 glucan anabolism", "beta-1,6 glucan biosynthesis", "beta-1,6 glucan biosynthetic process", "beta-1,6 glucan formation", "beta-1,6...
[ "EXACT", "EXACT", "EXACT", "EXACT", "EXACT", "EXACT", "EXACT", "EXACT", "EXACT", "EXACT" ]
[]
[]
[]
[ "GO:0006077", "GO:0051274" ]
[]
[]
[]
[ "GO:0006077", "GO:0051274" ]
[]
[]
[]
[]
[]
[]
null
null
false
true
9
GO:0006079
6,079
(1->6)-beta-D-glucan catabolic process
biological_process
The chemical reactions and pathways resulting in the breakdown of (1->6)-beta-D-glucans.
[ "GOC:ai" ]
null
[ "1,6-beta-D-glucan breakdown", "1,6-beta-D-glucan catabolic process", "1,6-beta-D-glucan catabolism", "1,6-beta-D-glucan degradation", "beta-1,6 glucan breakdown", "beta-1,6 glucan catabolic process", "beta-1,6 glucan catabolism", "beta-1,6 glucan degradation" ]
[ "EXACT", "EXACT", "EXACT", "EXACT", "EXACT", "EXACT", "EXACT", "EXACT" ]
[]
[]
[]
[ "GO:0006077", "GO:0051275" ]
[]
[]
[]
[ "GO:0006077", "GO:0051275" ]
[]
[]
[]
[]
[]
[]
null
null
false
true
3
GO:0006080
6,080
substituted mannan metabolic process
biological_process
The chemical reactions and pathways involving a mannan backbone composed of D-mannose unites, substituted with D-glucose and/or D-galactose units.
[ "GOC:tair_curators" ]
null
[ "substituted mannan metabolism" ]
[ "EXACT" ]
[]
[]
[]
[ "GO:0005976" ]
[]
[]
[]
[ "GO:0005976" ]
[]
[]
[]
[]
[]
[]
null
null
false
true
5
GO:0006081
6,081
aldehyde metabolic process
biological_process
The chemical reactions and pathways involving aldehydes, any organic compound with the formula R-CH=O, as carried out by individual cells.
[ "GOC:curators", "ISBN:0198506732" ]
null
[ "aldehyde metabolism", "alkanal metabolic process", "alkanal metabolism" ]
[ "EXACT", "EXACT", "EXACT" ]
[]
[ "goslim_pir" ]
[]
[ "GO:0008152" ]
[]
[]
[]
[ "GO:0008152" ]
[]
[]
[]
[]
[]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/28908\" xsd:anyURI" ]
null
null
false
true
7
GO:0006082
6,082
organic acid metabolic process
biological_process
The chemical reactions and pathways involving organic acids, any acidic compound containing carbon in covalent linkage.
[ "ISBN:0198506732" ]
null
[ "organic acid metabolism" ]
[ "EXACT" ]
[]
[ "goslim_pir" ]
[]
[ "GO:0044281" ]
[]
[]
[]
[ "GO:0044281" ]
[]
[]
[]
[]
[]
[]
null
null
false
true
6
GO:0006083
6,083
acetate metabolic process
biological_process
The chemical reactions and pathways involving acetate, the anion of acetic acid.
[ "GOC:curators" ]
null
[ "acetate metabolism" ]
[ "EXACT" ]
[]
[]
[]
[ "GO:0032787" ]
[]
[]
[]
[ "GO:0032787" ]
[]
[]
[]
[]
[]
[]
null
null
false
true
2
GO:0006084
6,084
acetyl-CoA metabolic process
biological_process
The chemical reactions and pathways involving acetyl-CoA, a derivative of coenzyme A in which the sulfhydryl group is acetylated; it is a metabolite derived from several pathways (e.g. glycolysis, fatty acid oxidation, amino-acid catabolism) and is further metabolized by the tricarboxylic acid cycle. It is a key interm...
[ "ISBN:0198547684" ]
null
[ "acetyl coenzyme A metabolic process", "acetyl coenzyme A metabolism", "acetyl-CoA metabolism" ]
[ "EXACT", "EXACT", "EXACT" ]
[]
[]
[]
[ "GO:0006637" ]
[]
[]
[]
[ "GO:0006637" ]
[]
[]
[]
[]
[]
[]
null
null
false
true
8
GO:0006085
6,085
acetyl-CoA biosynthetic process
biological_process
The chemical reactions and pathways resulting in the formation of acetyl-CoA, a derivative of coenzyme A in which the sulfhydryl group is acetylated.
[ "GOC:curators" ]
null
[ "acetyl-CoA anabolism", "acetyl-CoA biosynthesis", "acetyl-CoA formation", "acetyl-CoA synthesis" ]
[ "EXACT", "EXACT", "EXACT", "EXACT" ]
[]
[]
[ "MetaCyc:ACETATEUTIL-PWY", "MetaCyc:Acetyl-CoA-Biosynthesis", "MetaCyc:ETOH-ACETYLCOA-ANA-PWY", "MetaCyc:PWY-5172", "MetaCyc:PWY66-161", "MetaCyc:PWY66-162", "MetaCyc:PWY66-21" ]
[ "GO:0006084", "GO:0071616" ]
[]
[]
[]
[ "GO:0006084", "GO:0071616" ]
[]
[]
[]
[]
[]
[ "skos:narrowMatch MetaCyc:ACETATEUTIL-PWY", "skos:narrowMatch MetaCyc:ETOH-ACETYLCOA-ANA-PWY", "skos:narrowMatch MetaCyc:PWY-5172", "skos:narrowMatch MetaCyc:PWY66-161", "skos:narrowMatch MetaCyc:PWY66-162", "skos:narrowMatch MetaCyc:PWY66-21", "term_tracker_item \"https://github.com/geneontology/go-ont...
null
null
false
true
2
GO:0006086
6,086
pyruvate decarboxylation to acetyl-CoA
biological_process
The chemical reactions and pathways resulting in the formation of acetyl-CoA from pyruvate. In most organisms, this pathway links glycolysis to the TCA cycle, by a series of three reactions carried out by a multisubunit complex called the 'pyruvate dehydrogenase complex', even though pyruvate dehydrogenase activity de...
[ "MetaCyc:PYRUVDEHYD-PWY" ]
null
[ "acetyl-CoA anabolism from pyruvate", "acetyl-CoA biosynthetic process from pyruvate", "acetyl-CoA formation from pyruvate", "acetyl-CoA synthesis from pyruvate", "oxidative decarboxylation of pyruvate", "pyruvate decarboxylation", "pyruvate dehydrogenase pathway" ]
[ "EXACT", "EXACT", "EXACT", "EXACT", "EXACT", "NARROW", "EXACT" ]
[]
[]
[ "MetaCyc:PWY-6970", "MetaCyc:PWY-8275", "MetaCyc:PYRUVDEHYD-PWY", "Reactome:R-HSA-9861559 \"PDH complex synthesizes acetyl-CoA from PYR\"" ]
[ "GO:0006085", "GO:0006090" ]
[ "has_part GO:0004148", "has_part GO:0004739", "has_part GO:0004742", "part_of GO:0009060" ]
[ "has_part", "has_part", "has_part", "part_of" ]
[ "GO:0004148", "GO:0004739", "GO:0004742", "GO:0009060" ]
[ "GO:0004148", "GO:0004739", "GO:0004742", "GO:0006085", "GO:0006090", "GO:0009060" ]
[]
[]
[]
[]
[]
[ "skos:narrowMatch MetaCyc:PWY-6970", "skos:narrowMatch MetaCyc:PWY-8275", "skos:narrowMatch MetaCyc:PYRUVDEHYD-PWY", "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/24348\" xsd:anyURI", "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/30067\" xsd:anyURI", "te...
null
null
false
true
2
GO:0006088
6,088
obsolete acetate to acetyl-CoA
biological_process
OBSOLETE. (Was not defined before being made obsolete).
[ "GOC:ai" ]
This term was made obsolete because it represents a function rather than a process.
[ "acetate to acetyl-CoA" ]
[ "EXACT" ]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[ "GO:0003987" ]
[]
null
null
true
true
1
GO:0006089
6,089
lactate metabolic process
biological_process
The chemical reactions and pathways involving lactate, the anion of lactic acid.
[ "ISBN:0198547684" ]
null
[ "2-hydroxypropanoate metabolic process", "2-hydroxypropanoate metabolism", "alpha-hydroxypropionate metabolic process", "alpha-hydroxypropionate metabolism", "lactate metabolism" ]
[ "EXACT", "EXACT", "EXACT", "EXACT", "EXACT" ]
[]
[]
[]
[ "GO:0032787" ]
[]
[]
[]
[ "GO:0032787" ]
[]
[]
[]
[]
[]
[]
null
null
false
true
1
GO:0006090
6,090
pyruvate metabolic process
biological_process
The chemical reactions and pathways involving pyruvate, 2-oxopropanoate.
[ "GOC:curators" ]
null
[ "pyruvate dehydrogenase bypass", "pyruvate metabolism" ]
[ "RELATED", "EXACT" ]
[ "GO:0006087" ]
[ "gocheck_do_not_annotate", "goslim_drosophila" ]
[ "Wikipedia:Pyruvic_acid" ]
[ "GO:0032787" ]
[]
[]
[]
[ "GO:0032787" ]
[]
[]
[]
[]
[]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/29541\" xsd:anyURI", "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/31634\" xsd:anyURI" ]
null
null
false
true
5
GO:0006091
6,091
generation of precursor metabolites and energy
biological_process
The chemical reactions and pathways resulting in the formation of precursor metabolites, substances from which energy is derived, and any process involved in the liberation of energy from these substances.
[ "GOC:jl" ]
null
[ "energy pathways", "intermediary metabolism", "metabolic energy generation" ]
[ "BROAD", "RELATED", "RELATED" ]
[]
[ "goslim_candida", "goslim_chembl", "goslim_drosophila", "goslim_euk_cellular_processes_ribbon", "goslim_generic", "goslim_metagenomics", "goslim_pir", "goslim_plant", "goslim_plant_ribbon", "goslim_pombe", "goslim_prokaryote", "goslim_prokaryote_ribbon", "goslim_yeast" ]
[]
[ "GO:0008152" ]
[]
[]
[]
[ "GO:0008152" ]
[]
[]
[]
[]
[]
[]
null
null
false
true
8
GO:0006094
6,094
gluconeogenesis
biological_process
The formation of glucose from noncarbohydrate precursors, such as pyruvate, amino acids and glycerol.
[ "MetaCyc:GLUCONEO-PWY" ]
null
[ "glucose biosynthesis", "glucose biosynthetic process" ]
[ "EXACT", "EXACT" ]
[]
[]
[ "MetaCyc:GLUCONEO-PWY", "MetaCyc:PWY-6142", "MetaCyc:PWY66-399", "Reactome:R-HSA-70263 \"Gluconeogenesis\"", "Wikipedia:Gluconeogenesis" ]
[ "GO:0006006", "GO:0019319" ]
[]
[]
[]
[ "GO:0006006", "GO:0019319" ]
[]
[]
[]
[]
[]
[ "skos:narrowMatch MetaCyc:GLUCONEO-PWY", "skos:narrowMatch MetaCyc:PWY-6142", "skos:narrowMatch MetaCyc:PWY66-399", "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/28953\" xsd:anyURI" ]
null
null
false
true
1
GO:0006096
6,096
glycolytic process
biological_process
The chemical reactions and pathways resulting in the breakdown of a carbohydrate into pyruvate, with the concomitant production of a small amount of ATP and the reduction of NAD(P) to NAD(P)H. Glycolysis begins with the metabolism of a carbohydrate to generate products that can enter the pathway and ends with the produ...
[ "GOC:bf", "GOC:dph", "ISBN:0201090910", "ISBN:0716720094", "ISBN:0879010479", "Wikipedia:Glycolysis" ]
null
[ "anaerobic glycolysis", "Embden-Meyerhof pathway", "Embden-Meyerhof-Parnas pathway", "glycolysis", "modified Embden-Meyerhof pathway" ]
[ "RELATED", "RELATED", "RELATED", "RELATED", "RELATED" ]
[ "GO:0019641", "GO:0019642" ]
[]
[ "MetaCyc:GLYCOLYSIS-VARIANTS" ]
[ "GO:0006090", "GO:0006091", "GO:0016052", "GO:0019364", "GO:0046032", "GO:0046034", "GO:0046496" ]
[ "has_part GO:0004618", "has_part GO:0004619", "has_part GO:0004634", "has_part GO:0004743", "has_part GO:0043891", "part_of GO:0009060" ]
[ "has_part", "has_part", "has_part", "has_part", "has_part", "part_of" ]
[ "GO:0004618", "GO:0004619", "GO:0004634", "GO:0004743", "GO:0043891", "GO:0009060" ]
[ "GO:0004618", "GO:0004619", "GO:0004634", "GO:0004743", "GO:0006090", "GO:0006091", "GO:0009060", "GO:0016052", "GO:0019364", "GO:0043891", "GO:0046032", "GO:0046034", "GO:0046496" ]
[]
[]
[]
[]
[]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/21176\" xsd:anyURI", "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/30067\" xsd:anyURI" ]
null
null
false
true
2
GO:0006097
6,097
glyoxylate cycle
biological_process
A modification of the TCA cycle occurring in some plants and microorganisms, in which isocitrate is cleaved to glyoxylate and succinate. Glyoxylate can then react with acetyl-CoA to form malate.
[ "ISBN:0198506732" ]
null
[ "glyoxylate bypass" ]
[ "EXACT" ]
[]
[]
[ "MetaCyc:GLYOXYLATE-BYPASS", "Wikipedia:Glyoxylate_cycle" ]
[ "GO:0005975", "GO:0046487" ]
[]
[]
[]
[ "GO:0005975", "GO:0046487" ]
[]
[]
[]
[]
[]
[]
null
null
false
true
2
GO:0006098
6,098
pentose-phosphate shunt
biological_process
The metabolic process in which glucose-6-phosphate is oxidized to form carbon dioxide (CO2) and ribulose 5-phosphate, coupled to reduction of NADP+ to NADPH; ribulose 5-P then enters a series of reactions that can yield biosynthetic precursors (ribose-5-phosphate and erythrose-4-phosphate) and glycolytic intermediates ...
[ "GOC:pde", "ISBN:0198506732", "MetaCyc:PENTOSE-P-PWY" ]
null
[ "hexose monophosphate pathway", "pentose phosphate pathway", "pentose phosphate shunt", "pentose-phosphate pathway" ]
[ "EXACT", "EXACT", "EXACT", "EXACT" ]
[]
[]
[ "KEGG_PATHWAY:map00030", "MetaCyc:PENTOSE-P-PWY", "Reactome:R-HSA-71336 \"Pentose phosphate pathway\"", "Wikipedia:Pentose_phosphate_pathway" ]
[ "GO:0006740", "GO:0051156" ]
[ "has_part GO:0009051", "has_part GO:0009052" ]
[ "has_part", "has_part" ]
[ "GO:0009051", "GO:0009052" ]
[ "GO:0006740", "GO:0009051", "GO:0009052", "GO:0051156" ]
[]
[]
[]
[]
[]
[]
null
null
false
true
1
GO:0006099
6,099
tricarboxylic acid cycle
biological_process
A nearly universal metabolic pathway in which the acetyl group of acetyl coenzyme A is effectively oxidized to two CO2 and four pairs of electrons are transferred to coenzymes. The acetyl group combines with oxaloacetate to form citrate, which undergoes successive transformations to isocitrate, 2-oxoglutarate, succinyl...
[ "ISBN:0198506732" ]
null
[ "citric acid cycle", "Krebs cycle", "oxidative TCA cycle", "TCA cycle" ]
[ "EXACT", "EXACT", "EXACT", "EXACT" ]
[]
[]
[ "MetaCyc:P105-PWY", "MetaCyc:PWY-5690", "MetaCyc:PWY-5913", "MetaCyc:PWY-6969", "MetaCyc:PWY-7254", "MetaCyc:PWY66-398", "MetaCyc:REDCITCYC", "MetaCyc:TCA", "MetaCyc:TCA-1", "Reactome:R-HSA-71403 \"Citric acid cycle (TCA cycle)\"", "Wikipedia:Tricarboxylic_acid_cycle" ]
[ "GO:0044238" ]
[ "part_of GO:0009060" ]
[ "part_of" ]
[ "GO:0009060" ]
[ "GO:0009060", "GO:0044238" ]
[]
[]
[]
[]
[]
[ "skos:narrowMatch MetaCyc:P105-PWY", "skos:narrowMatch MetaCyc:PWY-5690", "skos:narrowMatch MetaCyc:PWY-5913", "skos:narrowMatch MetaCyc:PWY-6969", "skos:narrowMatch MetaCyc:PWY-7254", "skos:narrowMatch MetaCyc:PWY66-398", "skos:narrowMatch MetaCyc:REDCITCYC", "skos:narrowMatch MetaCyc:TCA", "skos:n...
null
null
false
true
3
GO:0006100
6,100
obsolete tricarboxylic acid cycle intermediate metabolic process
biological_process
OBSOLETE. The chemical reactions and pathways involving intermediates of the tricarboxylic acid cycle.
[ "GOC:ai" ]
This term was made obsolete because it is a grouping term that is not useful, but has caused true path violations.
[ "citric acid cycle intermediate metabolic process", "citric acid cycle intermediate metabolism", "Krebs cycle intermediate metabolic process", "Krebs cycle intermediate metabolism", "TCA intermediate metabolic process", "TCA intermediate metabolism", "tricarboxylic acid cycle intermediate metabolic proc...
[ "EXACT", "EXACT", "EXACT", "EXACT", "EXACT", "EXACT", "EXACT", "EXACT" ]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[ "GO:0006099", "GO:0006101", "GO:0006103", "GO:0006104", "GO:0006105", "GO:0006106", "GO:0006107", "GO:0006108" ]
[]
null
null
true
true
9
GO:0006101
6,101
citrate metabolic process
biological_process
The chemical reactions and pathways involving citrate, 2-hydroxy-1,2,3-propanetricarboxylate. Citrate is widely distributed in nature and is an important intermediate in the TCA cycle and the glyoxylate cycle.
[ "ISBN:0198506732" ]
null
[ "citrate metabolism" ]
[ "EXACT" ]
[]
[]
[]
[ "GO:0072350" ]
[]
[]
[]
[ "GO:0072350" ]
[]
[]
[]
[]
[]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/30161\" xsd:anyURI" ]
null
null
false
true
4