LiteFold/GO · Datasets at Hugging Face

GO:1990496

1,990,496

obsolete regulation of actin filament organization involved in mitotic cytokinetic actomyosin contractile ring assembly

biological_process

OBSOLETE. An actin filament organization process that contributes to regulation of actomyosin contractile ring assembly during mitotic cytokinesis.

[ "PMID:24798735" ]

This term was obsoleted at the TermGenie Gatekeeper stage.

[ "regulation of actin filament organization involved in mitotic cytokinetic actomyosin contractile ring assembly" ]

[ "EXACT" ]

[]

al

2014-09-25T09:21:57Z

true

7

GO:1990497

1,990,497

regulation of cytoplasmic translation in response to stress

biological_process

Modulation of the frequency, rate or extent of cytoplasmic translation as a result of a stimulus indicating the organism is under stress. The stress is usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation).

[ "GOC:vw", "PMID:16278445" ]

null

[]

[ "GO:0043555", "GO:2000765" ]

[]

[ "GO:0043555", "GO:2000765" ]

[ "GO:0065007", "part_of GO:0033554", "regulates GO:0002181" ]

[]

vw

2014-09-26T11:11:29Z

false

true

6

GO:1990498

1,990,498

mitotic spindle microtubule

cellular_component

Any microtubule that is part of a mitotic spindle; anchored at one spindle pole.

[ "GOC:vw" ]

null

[]

[ "GO:0005876" ]

[ "part_of GO:0072686" ]

[ "part_of" ]

[ "GO:0072686" ]

[ "GO:0005876", "GO:0072686" ]

[]

vw

2014-09-26T13:34:40Z

false

true

1

GO:1990499

1,990,499

raps-insc complex

cellular_component

Protein complex required for the asymmetric division of neuroblasts in Drosophila. Coordinates asymmetric localization of cell fate determinants with orientation of the mitotic spindle resulting in different daughter cells upon division. Localizes at the apical cortex of the neuroblast: Raps maintains, but does not ini...

[ "GOC:bhm", "PMID:22171003" ]

An example of this is Insc in drome (Q9W2R4) in PMID:22171003 (inferred from physical interaction).

[ "partner of inscuteable-inscuteable complex", "Rapsynoid-Inscuteable complex" ]

[ "EXACT", "EXACT" ]

[]

[ "GO:0032991" ]

[ "part_of GO:0045179" ]

[ "part_of" ]

[ "GO:0045179" ]

[ "GO:0032991", "GO:0045179" ]

[]

bhm

2014-09-30T09:22:18Z

false

true

6

GO:1990500

1,990,500

eif4e-cup complex

cellular_component

A protein complex that causes translational repression in Drosophila. Prevents assembly of ribosomes at the mRNA by interfacing with a sequence-specific RNA-binding protein leading to recruitment of the CCR4 complex and consequently, reduction of the mRNA's poly(A) tail length. The complex is also required for dorso-ve...

[ "GOC:bhm", "PMID:14723848" ]

An example of this is Eif4e in drome (P48598) in PMID:14723848 (inferred from physical interaction).

[ "eukaryotic translation initiation factor 4E-cup complex" ]

[ "EXACT" ]

[]

[ "GO:1903502" ]

[ "part_of GO:0000932" ]

[ "part_of" ]

[ "GO:0000932" ]

[ "GO:0000932", "GO:1903502" ]

[]

bhm

2014-09-30T12:31:49Z

false

true

9

GO:1990501

1,990,501

exon-exon junction subcomplex mago-y14

cellular_component

Component of the core exon-exon-junction complex (EJC). Fairly conserved in eukaryotes; in Drosophila, consists of the Mago and Y14 (tsunagi) gene products. Important for coupling nuclear and cytoplasmic events in gene expression. Inhibits the ATPase activity of eIF4AIII (Q9VHS8) to ensure a stable association of the E...

[ "GOC:bhm", "PMID:12730685" ]

An example of this is Mago in drome (P49028) in PMID:12730685 (inferred from direct assay).

[ "exon junction subcomplex MAGOH-Y14", "mago-y14 complex", "MGN-RBM8A complex" ]

[ "EXACT", "RELATED", "EXACT" ]

[]

[ "GO:0035145", "GO:1903503" ]

[]

[ "GO:0035145", "GO:1903503" ]

[]

bhm

2014-09-30T14:05:28Z

false

true

2

GO:1990502

1,990,502

dense core granule maturation

biological_process

Steps required to transform a dense core granule generated at the trans-Golgi network into a fully formed and transmissible dense core granule. Dense core granule maturation proceeds through clathrin-mediated membrane remodeling events and is essential for efficient processing of cargo within dense core granules as wel...

[ "GOC:kmv", "PMID:22654674" ]

null

[ "dense core vesicle maturation" ]

[ "EXACT" ]

[]

[ "GO:0061792" ]

[]

[ "GO:0061792" ]

[]

kmv

2014-09-30T20:35:11Z

false

true

6

GO:1990503

1,990,503

dendritic lamellar body

cellular_component

A specialized secretory organelle found in neurons and associated with the formation of dendrodendritic gap junctions.

[ "PMID:7869120" ]

null

[ "DLB" ]

[ "EXACT" ]

[]

[ "GO:0042599" ]

[ "part_of GO:0030425" ]

[ "part_of" ]

[ "GO:0030425" ]

[ "GO:0030425", "GO:0042599" ]

[]

sl

2014-09-30T20:47:28Z

false

true

4

GO:1990504

1,990,504

dense core granule exocytosis

biological_process

The secretion of molecules (e.g. neuropeptides, insulin-related peptides or neuromodulators such as serotonin and dopamine) contained within a membrane-bounced dense core granule by fusion of the granule with the plasma membrane of a cell in response to increased cytosolic calcium levels.

[ "GOC:kmv", "PMID:17553987", "PMID:24653208" ]

null

[ "dense core vesicle exocytosis" ]

[ "EXACT" ]

[]

[ "GO:0017156", "GO:0032253", "GO:0051650" ]

[]

[ "GO:0017156", "GO:0032253", "GO:0051650" ]

[]

kmv

2014-09-30T21:05:50Z

false

true

6

GO:1990505

1,990,505

mitotic DNA replication maintenance of fidelity

biological_process

Any maintenance of fidelity that is involved in mitotic cell cycle DNA replication.

[ "PMID:19185548" ]

null

[ "maintenance of fidelity involved in mitotic cell cycle DNA replication", "maintenance of fidelity involved in mitotic DNA replication" ]

[ "EXACT", "EXACT" ]

[ "GO:1990510" ]

[]

[ "GO:1902298", "GO:1903047" ]

[ "part_of GO:1902969" ]

[ "part_of" ]

[ "GO:1902969" ]

[ "GO:1902298", "GO:1902969", "GO:1903047" ]

[ "GO:1902298", "part_of GO:0000278" ]

[]

al

2014-10-01T14:09:05Z

false

true

4

GO:1990506

1,990,506

mitotic DNA-templated DNA replication

biological_process

A DNA replication process that uses parental DNA as a template for the DNA-dependent DNA polymerases that synthesize the new strands during the mitotic cell cycle.

[ "PMID:16120966" ]

null

[ "mitotic DNA-dependent DNA replication" ]

[ "EXACT" ]

[]

[ "GO:1902969" ]

[]

[ "GO:1902969" ]

[]

al

2014-10-01T14:13:23Z

false

true

1

GO:1990507

1,990,507

obsolete ATP-independent chaperone mediated protein folding

biological_process

OBSOLETE. The process of inhibiting aggregation and assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure that is dependent on interaction with a chaperone, and independent of ATP hydrolysis.

[ "GOC:rb", "PMID:25242142" ]

This term was obsoleted because it represents a molecular function.

[]

[ "GO:0006457", "GO:0044183" ]

[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/21930\" xsd:anyURI" ]

rb

2014-10-01T23:55:05Z

true

8

GO:1990508

1,990,508

CKM complex

cellular_component

Cyclin-dependent kinase complex which reversibly associates with the Mediator complex. In Saccharomyces cerevisiae it consists of SSN2, SSN3, SSN8 and SRB8.

[ "GOC:bhm", "PMID:12200444" ]

An example of this is SSN2 in Saccharomyces cerevisiae (P38931) in PMID:12200444 (inferred from physical interaction).

[ "CDK8 kinase module", "SRB8-SRB11 complex", "SRB8/9/10/11 complex" ]

[ "EXACT", "EXACT", "EXACT" ]

[]

[ "GO:0019908" ]

[]

[ "GO:0019908" ]

[]

bhm

2014-10-02T10:05:58Z

false

true

7

GO:1990509

1,990,509

PYM-mago-Y14 complex

cellular_component

Protein complex involved in the disassembly of Mago-Y14 from the spliced mRNA during first round of translation, independently of the translational machinery. Conserved from fission yeast to humans.

[ "GOC:bhm", "PMID:14968132" ]

An example of this is wibg in Drosophila melanogaster (P82804) in PMID:14968132 (inferred from physical interaction).

[ "PYM-mago-RNA-binding protein 8A complex", "wibg-mago-tsu complex" ]

[ "EXACT", "EXACT" ]

[]

[ "GO:0032991" ]

[ "has_part GO:1990501" ]

[ "has_part" ]

[ "GO:1990501" ]

[ "GO:0032991", "GO:1990501" ]

[]

bhm

2014-10-03T12:52:01Z

false

true

8

GO:1990512

1,990,512

Cry-Per complex

cellular_component

Nuclear transcriptional repressor complex that is capable of negatively regulating CLOCK-BMAL-dependent transactivation of genes in a delayed negative feedback manner which generates circadian rhythms.

[ "GOC:bhm", "PMID:24855952" ]

An example of this is Cry1 in mouse (P97784) in PMID:24855952 (inferred from physical interaction).

[]

[ "GO:0017053", "GO:0140513" ]

[]

[ "GO:0017053", "GO:0140513" ]

[]

bhm

2014-10-08T10:53:07Z

false

true

8

GO:1990513

1,990,513

CLOCK-BMAL transcription complex

cellular_component

Transcription factor complex which interacts with E-box regulatory elements in target genes, including Period (Per1, Per2, Per3) and Cryptochrome (Cry1, Cry2), to activate their transcription during the daytime. The CRY-PER complexes inhibit CLOCK-BMAL1-driven transcription in a negative feedback loop to generate circa...

[ "GOC:bhm", "PMID:23229515" ]

An example of this is CLOCK in human (O15516) in PMID:23229515 (inferred from physical interaction).

[ "CLOCK/BMAL complex" ]

[ "EXACT" ]

[]

[ "GO:0090575" ]

[]

[ "GO:0090575" ]

[]

bhm

2014-10-08T13:10:24Z

false

true

9

GO:1990514

1,990,514

5' transitive RNA interference

biological_process

An RNA interference where the silencing signal spreads 5' along the target mRNA, outside of the initial target sequence. Typically involves the formation of secondary siRNAs formed when the initial mRNA target sequence functions as a template for 5' to 3' synthesis of new dsRNA.

[ "GOC:pf", "PMID:24369430" ]

null

[]

[ "GO:0036453" ]

[]

[ "GO:0036453" ]

[]

jl

2014-10-09T15:29:31Z

false

true

4

GO:1990516

1,990,516

ribonucleotide excision repair

biological_process

The pathway by which a ribonucleotide is removed from DNA and replaced by a deoxyribonucleotide. The ribonucleotide is incised by RNase H2, and further excised by an endonuclease. The resulting 1 nt gap is then repaired by DNA polymerase and DNA ligase.

[ "PMID:12475934", "PMID:22864116" ]

null

[]

[ "GO:0070716" ]

[]

[ "GO:0070716" ]

[]

al

2014-10-14T12:24:37Z

false

true

2

GO:1990517

1,990,517

obsolete protein localization to photoreceptor outer segment

biological_process

OBSOLETE. A process in which a protein is transported to, or maintained in, a location within a photoreceptor outer segment, which is a portion of a modified sensory cilium.

[ "GOC:krc", "PMID:20212494" ]

This term was obsoleted at the TermGenie Gatekeeper stage.

[]

krc

2014-10-14T14:01:34Z

true

3

GO:1990518

1,990,518

single-stranded 3'-5' DNA helicase activity

molecular_function

Catalysis of the reaction: ATP + H2O = ADP + phosphate, in the presence of single-stranded DNA; drives the unwinding of the DNA helix in the direction 3' to 5'.

[ "PMID:25165823" ]

null

[]

[ "GO:0017116", "GO:0043138" ]

[]

[ "GO:0017116", "GO:0043138" ]

[]

[ "skos:broadMatch EC:3.6.4.12", "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/28520\" xsd:anyURI" ]

al

2014-10-22T10:17:40Z

false

true

5

GO:1990519

1,990,519

pyrimidine nucleotide import into mitochondrion

biological_process

The process in which a pyrimidine nucleotide is transported across the mitochondrial inner membrane, into the mitochondrial matrix.

[ "PMID:16194150" ]

null

[ "mitochondrial pyrimidine nucleotide import" ]

[ "EXACT" ]

[]

[ "GO:0006864", "GO:0010496", "GO:0072531", "GO:1901679" ]

[]

[ "GO:0006864", "GO:0010496", "GO:0072531", "GO:1901679" ]

[]

vw

2014-10-22T10:20:23Z

false

true

6

GO:1990520

1,990,520

separase-securin complex

cellular_component

A protein complex that includes separase (a protease which cleaves cohesin as part of chromosome separation) and securin, a protease inhibitor. Chromosome separation is inhibited until securin is degraded by the Anaphase Promoting Complex (APC).

[ "GOC:dos", "GOC:vw", "PMID:8978688" ]

null

[ "Cut1-2 complex" ]

[ "EXACT" ]

[]

[ "GO:1905369" ]

[]

[ "GO:1905369" ]

[]

vw

2014-10-23T10:34:52Z

false

true

8

GO:1990521

1,990,521

obsolete m7G(5')pppN diphosphatase activator activity

molecular_function

OBSOLETE. Binds to and increases the activity of m7G(5')pppN diphosphatase.

[ "PMID:22323607" ]

This term was obsoleted because the obsoleted EC was obsoleted.

[]

[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/23290\" xsd:anyURI" ]

vw

2014-10-23T11:20:56Z

true

8

GO:1990522

1,990,522

tail spike morphogenesis

biological_process

The process in which the nematode tail spike is generated and organized. An example of this process is seen in C. elegans, where the tapered tail spike is formed during embryogenesis by a filamentous process that passes posteriorly through hyp10, the tail ventral hypodermis; the filamentous process is formed by a binuc...

[ "GOC:kmv", "PMID:17329362", "PMID:6684600" ]

null

[]

[ "WBbt:0006979", "WBbt:0008072" ]

[ "GO:0009653" ]

[]

[ "GO:0009653" ]

[]

jl

2014-10-23T15:20:15Z

false

true

4

GO:1990523

1,990,523

bone regeneration

biological_process

The regrowth of bone following its loss or destruction.

[ "PMID:25257467" ]

null

[]

[ "GO:0042246" ]

[]

[ "GO:0042246" ]

[]

sl

2014-10-30T15:47:39Z

false

true

8

GO:1990524

1,990,524

INA complex

cellular_component

A protein complex located in the inner membrane of mitochondria that is involved in the assembly of the peripheral (or stator) stalk of the mitochondrial proton-transporting ATP synthase (also known as the F1F0 ATP synthase). In budding yeast, this complex includes Ina22p and Ina17p.

[ "GOC:rn", "PMID:24942160" ]

null

[ "INAC" ]

[ "EXACT" ]

[]

[ "GO:0098800" ]

[]

[ "GO:0098800" ]

[]

jl

2014-11-03T16:03:39Z

false

true

7

GO:1990525

1,990,525

BIR domain binding

molecular_function

Binding to a Baculovirus Inhibitor of apoptosis protein Repeat (BIR) domain.

[ "GOC:ha", "InterPro:IPR001370" ]

An example of this is the Drosophila reaper gene in PMID:21886178.

[ "Baculovirus Inhibitor of apoptosis protein Repeat domain binding" ]

[ "EXACT" ]

[]

[ "GO:0019904" ]

[]

[ "GO:0019904" ]

[]

jl

2014-11-04T12:36:56Z

false

true

8

GO:1990526

1,990,526

Ste12p-Dig1p-Dig2p complex

cellular_component

A multiprotein complex that is involved in the transcription regulation of mating genes in the yeast S. cerevisiae.

[ "GOC:rb", "PMID:16782869" ]

null

[]

[ "GO:0032991" ]

[]

[ "GO:0032991" ]

[]

rb

2014-11-05T22:49:32Z

false

true

9

GO:1990527

1,990,527

Tec1p-Ste12p-Dig1p complex

cellular_component

A multiprotein complex that is involved in the transcriptional regulation of primarily filamentation genes, but also mating genes, in the yeast S. cerevisiae.

[ "GOC:rb", "PMID:16782869" ]

null

[]

[ "GO:0032991" ]

[]

[ "GO:0032991" ]

[]

rb

2014-11-05T22:55:17Z

false

true

5

GO:1990529

1,990,529

glycosylphosphatidylinositol-mannosyltransferase I complex

cellular_component

A protein complex that is involved in the transfer of the four mannoses in the GPI-anchor precursor. In yeast S. cerevisiae this complex consists of Pbn1p and Gpi14p and in rat this complex consists of PIG-X and PIG-M.

[ "GOC:dph", "GOC:rb", "PMID:15635094" ]

null

[ "GPI-MT-I complex" ]

[ "RELATED" ]

[]

[ "GO:0031501", "GO:0140534" ]

[]

[ "GO:0031501", "GO:0140534" ]

[]

rb

2014-11-06T01:02:31Z

false

true

3

GO:1990531

1,990,531

phospholipid-translocating ATPase complex

cellular_component

A protein complex that functions as a phospholipid-translocating P-Type ATPase.

[ "GOC:dph", "GOC:rb", "PMID:15090616" ]

null

[ "aminophospholipid translocase complex", "APLT complex", "CDC50-DRS2 complex", "CRF1-DNF3 complex", "Dnf1-Lem3 complex", "Dnf2-Lem3 complex", "DNF3-CRF1 complex", "DRS2-CDC50 complex", "Lem3-Dnf1 complex", "Lem3p-Dnf1p complex", "P4-ATPase complex", "phospholipid flippase complex" ]

[ "EXACT", "EXACT", "NARROW", "NARROW", "NARROW", "NARROW", "NARROW", "NARROW", "NARROW", "NARROW", "EXACT", "EXACT" ]

[]

[ "GO:1990351" ]

[]

[ "GO:1990351" ]

[]

rb

2014-11-06T22:33:25Z

false

true

5

GO:1990532

1,990,532

stress response to nickel ion

biological_process

Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis caused by a nickel ion stimulus.

[ "GOC:kmv", "PMID:25330323" ]

null

[ "response to nickel ion stress", "response to nickel toxicity", "stress response to nickel" ]

[ "EXACT", "EXACT", "EXACT" ]

[]

[ "GO:0097501" ]

[]

[ "GO:0097501" ]

[]

kmv

2014-11-07T18:35:31Z

false

true

1

GO:1990533

1,990,533

Dom34-Hbs1 complex

cellular_component

A protein complex consisting of one subunit known as Dom34 or Pelota that has similarity to translation termination factor eRF1, and another subunit, Hbs1, that is a GTPase with similarity to translation termination factor eRF3. The Dom34-Hbs1 complex has a role in cotranslational mRNA quality control by promoting ribo...

[ "GOC:mcc", "PMID:20890290", "PMID:21102444", "PMID:21448132", "PMID:22503425" ]

null

[ "Dom34:Hbs1 complex" ]

[ "EXACT" ]

[]

[ "GO:0032991" ]

[]

[ "GO:0032991" ]

[]

mcc

2014-11-07T20:49:03Z

false

true

6

GO:1990534

1,990,534

thermospermine oxidase activity

molecular_function

Catalysis of the reaction: S-methyl-5'-thioadenosine + thermospermine + H+ = S-adenosyl 3-(methylthio)propylamine + spermidine.

[ "PMID:24906355", "RHEA:57836" ]

null

[]

[ "RHEA:57836" ]

[ "GO:0046592" ]

[]

[ "GO:0046592" ]

[]

[ "skos:exactMatch RHEA:57836", "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/30193\" xsd:anyURI" ]

tb

2014-11-13T00:41:59Z

false

true

4

GO:1990535

1,990,535

neuron projection maintenance

biological_process

The organization process that preserves a neuron projection in a stable functional or structural state. A neuron projection is a prolongation or process extending from a nerve cell, e.g. an axon or dendrite.

[ "GOC:kmv", "PMID:25359212" ]

null

[ "axon homeostasis", "axon maintenance", "neurite maintenance", "neuron process maintenance", "neuron protrusion maintenance", "neuronal cell projection maintenance" ]

[ "RELATED", "RELATED", "NARROW", "EXACT", "EXACT", "EXACT" ]

[]

[ "GO:0106027" ]

[]

[ "GO:0106027" ]

[]

kmv

2014-11-13T22:24:05Z

false

true

4

GO:1990536

1,990,536

phosphoenolpyruvate transmembrane import into Golgi lumen

biological_process

The directed movement of phosphoenolpyruvate into the Golgi lumen across the Golgi membrane.

[ "PMID:25195688" ]

null

[]

[ "GO:0089722" ]

[]

[ "GO:0089722" ]

[]

vw

2014-11-14T10:17:01Z

false

true

1

GO:1990538

1,990,538

xylan O-acetyltransferase activity

molecular_function

Catalysis of the reaction: acetyl-CoA + a xylan= CoA + an acetylated xylan.

[ "PMID:25141999" ]

null

[]

[ "GO:0016413" ]

[]

[ "GO:0016413" ]

[]

tb

2014-11-18T20:02:51Z

false

true

4

GO:1990539

1,990,539

fructose import across plasma membrane

biological_process

The directed movement of fructose substance from outside of a cell, across the plasma membrane and into the cytosol.

[ "PMID:10735857" ]

null

[ "fructose import", "fructose uptake" ]

[ "RELATED", "EXACT" ]

[ "GO:0032445" ]

[]

[ "GO:0015755", "GO:0140271" ]

[]

[ "GO:0015755", "GO:0140271" ]

[]

[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/23031\" xsd:anyURI" ]

vw

2014-11-19T10:57:17Z

false

true

5

GO:1990540

1,990,540

mitochondrial manganese ion transmembrane transport

biological_process

The process in which a manganese ion is transported across a mitochondrial membrane, into or out of the mitochondrion.

[ "PMID:12890866" ]

null

[]

[ "GO:0071421" ]

[]

[ "GO:0071421" ]

[]

vw

2014-11-19T11:03:09Z

false

true

9

GO:1990542

1,990,542

mitochondrial transmembrane transport

biological_process

The process in which a solute is transported from one side of a membrane to the other into, out of or within a mitochondrion.

[ "PMID:20533899" ]

null

[]

[ "GO:0006839", "GO:0055085" ]

[]

[ "GO:0006839", "GO:0055085" ]

[]

[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/24829\" xsd:anyURI", "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/25275\" xsd:anyURI", "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/26201\" xsd:anyURI", "term_tracker_item \"https://gi...

vw

2014-11-19T11:19:21Z

false

true

9

GO:1990543

1,990,543

mitochondrial S-adenosyl-L-methionine transmembrane transport

biological_process

The process in which S-adenosyl-L-methionine is transported across a mitochondrial membrane, into or out of the mitochondrion.

[ "PMID:14609944" ]

null

[]

[ "GO:1901962" ]

[]

[ "GO:1901962" ]

[]

vw

2014-11-19T11:26:27Z

false

true

6

GO:1990544

1,990,544

mitochondrial ATP transmembrane transport

biological_process

The process in which ATP is transported across a mitochondrial membrane, into or out of the mitochondrion.

[ "PMID:18485069" ]

null

[]

[ "GO:0015867", "GO:0072530", "GO:1901679" ]

[]

[ "GO:0015867", "GO:0072530", "GO:1901679" ]

[]

vw

2014-11-19T11:43:33Z

false

true

6

GO:1990545

1,990,545

mitochondrial thiamine pyrophosphate transmembrane transport

biological_process

The process in which thiamine pyrophosphate is transported across a mitochondrial membrane, into or out of the mitochondrion.

[ "PMID:12411483" ]

null

[]

[ "GO:0030974" ]

[]

[ "GO:0030974" ]

[]

vw

2014-11-19T11:47:15Z

false

true

5

GO:1990546

1,990,546

mitochondrial tricarboxylic acid transmembrane transport

biological_process

The process in which a tricarboxylic acid is transported across a mitochondrial membrane, into or out of the mitochondrion.

[ "GOC:vw" ]

null

[]

[ "GO:0035674" ]

[]

[ "GO:0035674" ]

[]

vw

2014-11-19T12:00:14Z

false

true

2

GO:1990547

1,990,547

mitochondrial phosphate ion transmembrane transport

biological_process

The process in which a phosphate ion is transported across a mitochondrial membrane, into or out of the mitochondrion.

[ "PMID:9099701" ]

null

[]

[ "GO:0035435" ]

[]

[ "GO:0035435" ]

[]

vw

2014-11-19T11:50:19Z

false

true

8

GO:1990548

1,990,548

mitochondrial FAD transmembrane transport

biological_process

The process in which FAD is transported across a mitochondrial membrane, into or out of the mitochondrion.

[ "PMID:14555654" ]

null

[]

[ "GO:0035350" ]

[]

[ "GO:0035350" ]

[]

vw

2014-11-19T12:04:35Z

false

true

7

GO:1990549

1,990,549

mitochondrial NAD transmembrane transport

biological_process

The process in which NAD is transported across a mitochondrial membrane, into or out of the mitochondrion.

[ "PMID:16291748" ]

null

[]

[ "GO:0035352" ]

[]

[ "GO:0035352" ]

[]

[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/21577\" xsd:anyURI" ]

vw

2014-11-19T12:09:51Z

false

true

4

GO:1990550

1,990,550

mitochondrial alpha-ketoglutarate transmembrane transport

biological_process

The process in which alpha-ketoglutarate is transported across a mitochondrial membrane, into or out of the mitochondrion.

[ "PMID:11013234", "PMID:20371607" ]

null

[ "mitochondrial 2-oxoglutarate transmembrane transport" ]

[ "EXACT" ]

[ "GO:1990552" ]

[]

[ "GO:0015742", "GO:1905039" ]

[]

[ "GO:0015742", "GO:1905039" ]

[]

vw

2014-11-19T12:11:59Z

false

true

2

GO:1990551

1,990,551

mitochondrial 2-oxoadipate transmembrane transport

biological_process

The process in which 2-oxoadipate is transported across a mitochondrial membrane, into or out of the mitochondrion.

[ "PMID:11013234" ]

null

[]

[ "GO:0006835", "GO:1905039" ]

[]

[ "GO:0006835", "GO:1905039" ]

[]

[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/26201\" xsd:anyURI" ]

vw

2014-11-19T12:25:48Z

false

true

5

GO:1990553

1,990,553

mitochondrial 5'-adenylyl sulfate transmembrane transport

biological_process

The process in which 5'-adenylyl sulfate is transported across a mitochondrial membrane, into or out of the mitochondrion.

[ "PMID:24296033" ]

null

[]

[ "GO:1902558" ]

[]

[ "GO:1902558" ]

[]

[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/26201\" xsd:anyURI" ]

vw

2014-11-19T12:32:01Z

false

true

4

GO:1990554

1,990,554

mitochondrial 3'-phospho-5'-adenylyl sulfate transmembrane transport

biological_process

The process in which 3'-phospho-5'-adenylyl sulfate is transported across a mitochondrial membrane, into or out of the mitochondrion.

[ "PMID:24296033" ]

null

[]

[ "GO:1902559" ]

[]

[ "GO:1902559" ]

[]

[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/26201\" xsd:anyURI" ]

vw

2014-11-19T12:39:22Z

false

true

1

GO:1990555

1,990,555

mitochondrial oxaloacetate transmembrane transport

biological_process

The process in which oxaloacetate is transported across a mitochondrial membrane, into or out of the mitochondrion.

[ "PMID:10428783" ]

null

[]

[ "GO:1902356" ]

[]

[ "GO:1902356" ]

[]

vw

2014-11-19T12:45:37Z

false

true

6

GO:1990556

1,990,556

mitochondrial isopropylmalate transmembrane transport

biological_process

The process in which 2-isopropylmalate(2-) is transported across a mitochondrial membrane, into or out of the mitochondrion.

[ "PMID:10428783" ]

null

[]

[ "GO:1902357" ]

[]

[ "GO:1902357" ]

[]

vw

2014-11-19T12:47:11Z

false

true

6

GO:1990557

1,990,557

mitochondrial sulfate transmembrane transport

biological_process

The process in which sulfate is transported across a mitochondrial membrane, into or out of the mitochondrion.

[ "PMID:10428783" ]

null

[]

[ "GO:1902358" ]

[]

[ "GO:1902358" ]

[]

vw

2014-11-19T12:49:35Z

false

true

9

GO:1990558

1,990,558

mitochondrial malonate(1-) transmembrane transport

biological_process

The process in which malonate(1-) is transported across a mitochondrial membrane, into or out of the mitochondrion.

[ "PMID:10428783" ]

null

[]

[ "GO:1901553" ]

[]

[ "GO:1901553" ]

[]

vw

2014-11-19T12:52:43Z

false

true

3

GO:1990560

1,990,560

obsolete DNA methyltransferase binding

molecular_function

OBSOLETE. Binding to a DNA methyltransferase.

[ "PMID:22880885" ]

This term was obsoleted at the TermGenie Gatekeeper stage.

[ "DNA methyltransferase binding" ]

[ "EXACT" ]

[]

sl

2014-11-19T16:30:28Z

true

9

GO:1990561

1,990,561

obsolete regulation of transcription from RNA polymerase II promoter in response to copper ion starvation

biological_process

OBSOLETE. Modulation of the frequency, rate or extent of transcription from an RNA polymerase II promoter as a result of a stimulus indicating the organism is deprived of copper ions.

[ "GOC:al", "PMID:10593913" ]

This term was obsoleted because it represents a GO-CAM model.

[]

[ "GO:0006357", "GO:0035874" ]

[]

al

2014-11-25T14:21:55Z

true

8

GO:1990562

1,990,562

syndecan-syntenin-ALIX complex

cellular_component

An exosome complex that is assembled in the multivesicular body (MVB) membrane and chaperoned to the exosome by the ESCRT-III machinery.

[ "GOC:bhm", "PMID:22660413" ]

An example of this is SCD1 in human (UniProt symbol P18827) in PMID:22660413 (inferred from physical interaction).

[ "exosome complex" ]

[ "BROAD" ]

[]

[ "GO:1990563" ]

[]

[ "GO:1990563" ]

[]

bhm

2014-11-25T16:30:47Z

false

true

9

GO:1990563

1,990,563

extracellular exosome complex

cellular_component

A protein complex that is wholly or partially contained within the lumen or membrane of the extracellular vesicular exosome.

[ "GOC:bhm", "PMID:22660413" ]

An example of this is SCD1 in human (UniProt symbol P18827) in PMID:22660413 (inferred from physical interaction).

[ "exosome complex", "extracellular vesicular exosome complex" ]

[ "EXACT", "EXACT" ]

[]

[ "GO:0140392" ]

[ "part_of GO:0070062" ]

[ "part_of" ]

[ "GO:0070062" ]

[ "GO:0070062", "GO:0140392" ]

[]

bhm

2014-11-25T16:35:53Z

false

true

1

GO:1990564

1,990,564

protein polyufmylation

biological_process

Covalent attachment of the ubiquitin-like protein UFM1 to a protein, forming an UFM1 chain.

[ "PMID:25219498" ]

null

[]

[ "GO:0071569" ]

[]

[ "GO:0071569" ]

[]

jl

2014-11-26T14:15:36Z

false

true

7

GO:1990565

1,990,565

HSP90-CDC37 chaperone complex

cellular_component

A protein kinase chaperone complex required for the proper folding, maturation and stabilization of target proteins (mostly signaling protein kinases, some steroid hormone receptors), usually during or immediately after completion of translation. The highly conserved, phosphorylated CDC37-Ser13 (vertebrates) or cdc37-S...

[ "GOC:bhm", "GOC:pad", "GOC:PARL", "PMID:21855797", "PMID:22939624" ]

An example of this is HSP90AB1 in human (UniProt symbol P08238) in PMID:21855797 (inferred from direct assay).

[]

[ "GO:0101031" ]

[ "part_of GO:0005737" ]

[ "part_of" ]

[ "GO:0005737" ]

[ "GO:0005737", "GO:0101031" ]

[]

bhm

2014-11-26T14:22:51Z

false

true

7

GO:1990567

1,990,567

DPS complex

cellular_component

A protein serine/threonine phosphatase complex that in S. pombe consists of the proteins Dis2, Ppn1, and Swd22.

[ "PMID:24945319" ]

null

[]

[ "GO:0008287" ]

[]

[ "GO:0008287" ]

[]

al

2014-11-27T09:56:18Z

false

true

8

GO:1990568

1,990,568

obsolete MIS18 complex

cellular_component

OBSOLETE. A centromere complex assembly protein that is required for the deposition of CENP-A on the centromere. The Mis18 complex localizes to centromeres just prior to the pre-nucleosomal HJURP/CENP-A/H4 complex and is absolutely required for the CENP-A-specific chaperone, Holliday junction recognition protein (HJURP...

[ "GOC:bhm", "PMID:25036634" ]

An example of this is MIS18A in human (Q9NYP9) in PMID:25036634 (inferred from physical interaction).

[ "MIS18 complex" ]

[ "EXACT" ]

[]

bhm

2014-11-27T10:52:20Z

true

8

GO:1990569

1,990,569

UDP-N-acetylglucosamine transmembrane transport

biological_process

The process in which UDP-N-acetylglucosamine is transported across a membrane.

[ "PMID:10788474" ]

null

[ "UDP-N-acetylglucosamine transport" ]

[ "RELATED" ]

[ "GO:0015788" ]

[]

[ "GO:0015711", "GO:0090481" ]

[]

[ "GO:0015711", "GO:0090481" ]

[]

vw

2014-11-27T11:56:35Z

false

true

8

GO:1990570

1,990,570

GDP-mannose transmembrane transport

biological_process

The process in which GDP-mannose is transported across a membrane.

[ "PMID:9395539" ]

null

[ "GDP-mannose transport" ]

[ "RELATED" ]

[ "GO:0015784" ]

[]

[ "GO:0015711", "GO:0090480" ]

[]

[ "GO:0015711", "GO:0090480" ]

[]

[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/27059\" xsd:anyURI" ]

vw

2014-11-27T12:05:09Z

false

true

9

GO:1990571

1,990,571

meiotic centromere clustering

biological_process

The process by which centromeres/kinetochores attach to and migrate along microtubules to become localized to clusters at the spindle pole body during a meiotic prometaphase I.

[ "PMID:10366596", "PMID:9009280" ]

null

[ "centromere clustering during meiosis", "homologous chromosome movement towards spindle pole in meiosis I prometaphase" ]

[ "EXACT", "EXACT" ]

[]

[ "GO:0016344", "GO:0070192", "GO:0098653" ]

[]

[ "GO:0016344", "GO:0070192", "GO:0098653" ]

[]

mah

2014-12-02T11:25:37Z

false

true

1

GO:1990572

1,990,572

TERT-RMRP complex

cellular_component

A ribonucleoprotein complex that has RNA-directed RNA polymerase (RdRP) activity, and is composed of telomerase reverse transcriptase (TERT) and the non-coding RNA component of mitochondrial RNA processing endoribonuclease (RMRP).

[ "GOC:bf", "GOC:BHF", "GOC:BHF_telomere", "GOC:nc", "PMID:19701182" ]

null

[ "telomerase reverse transcriptase:RMRP RNA complex" ]

[ "EXACT" ]

[]

[ "GO:0031379", "GO:1990904" ]

[]

[ "GO:0031379", "GO:1990904" ]

[]

bf

2014-12-02T11:29:12Z

false

true

3

GO:1990573

1,990,573

potassium ion import across plasma membrane

biological_process

The directed movement of potassium ions from outside of a cell, across the plasma membrane and into the cytosol.

[ "PMID:9139127" ]

null

[ "potassium import", "potassium ion import", "potassium ion uptake" ]

[ "BROAD", "BROAD", "BROAD" ]

[ "GO:0010107" ]

[]

[ "GO:0071805", "GO:0098659" ]

[]

[ "GO:0071805", "GO:0098659" ]

[]

vw

2014-12-04T09:48:12Z

false

true

6

GO:1990574

1,990,574

meiotic spindle astral microtubule

cellular_component

Any of the meiotic spindle microtubules that radiate in all directions from the spindle poles and are thought to contribute to the forces that separate the poles and position them in relation to the rest of the cell.

[ "PMID:10366596" ]

null

[]

[ "GO:0000235" ]

[ "part_of GO:0072687" ]

[ "part_of" ]

[ "GO:0072687" ]

[ "GO:0000235", "GO:0072687" ]

[ "GO:0000235", "part_of GO:0072687" ]

[]

vw

2014-12-04T09:55:09Z

false

true

6

GO:1990575

1,990,575

mitochondrial L-ornithine transmembrane transport

biological_process

The process in which L-ornithine is transported across a mitochondrial membrane, into or out of the mitochondrion.

[ "PMID:9237680" ]

null

[ "mitochondrial ornithine transmembrane transport", "mitochondrial ornithine transport" ]

[ "BROAD", "RELATED" ]

[ "GO:0000066" ]

[]

[ "GO:1903352", "GO:1990542" ]

[]

[ "GO:1903352", "GO:1990542" ]

[]

mah

2014-12-05T11:29:49Z

false

true

8

GO:1990577

1,990,577

C-terminal protein demethylation

biological_process

The removal of a methyl group from the C-terminal amino acid of a protein.

[ "PMID:11060018" ]

null

[]

[ "gocheck_obsoletion_candidate" ]

[]

[ "GO:0006482" ]

[]

[ "GO:0006482" ]

[]

mcc

2014-12-08T20:55:17Z

false

true

8

GO:1990578

1,990,578

perinuclear endoplasmic reticulum membrane

cellular_component

The membrane of the perinuclear endoplasmic reticulum, which is the portion of endoplasmic reticulum, the intracellular network of tubules and cisternae, that occurs near the nucleus.

[ "PMID:25454947" ]

null

[ "perinuclear ER membrane" ]

[ "EXACT" ]

[]

[ "GO:0031090" ]

[ "part_of GO:0005789", "part_of GO:0097038" ]

[ "part_of", "part_of" ]

[ "GO:0005789", "GO:0097038" ]

[ "GO:0005789", "GO:0031090", "GO:0097038" ]

[ "GO:0016020", "part_of GO:0097038" ]

[]

mcc

2014-12-09T01:13:01Z

false

true

2

GO:1990579

1,990,579

peptidyl-serine trans-autophosphorylation

biological_process

The phosphorylation of a peptidyl-serine to form peptidyl-O-phospho-L-serine on an identical protein. For example, phosphorylation by the other kinase within a homodimer.

[ "GOC:bf", "GOC:PARL", "PMID:21317875" ]

null

[ "serine autophosphorylation in trans", "serine transautophosphorylation" ]

[ "EXACT", "EXACT" ]

[]

[ "gocheck_obsoletion_candidate" ]

[]

[ "GO:0036289", "GO:0036290" ]

[]

[ "GO:0036289", "GO:0036290" ]

[]

bf

2014-12-09T09:20:08Z

false

true

4

GO:1990580

1,990,580

regulation of cytoplasmic translational termination

biological_process

Any process that modulates the frequency, rate or extent of cytoplasmic translational termination.

[ "PMID:11570975" ]

null

[]

[ "GO:0006449", "GO:2000765" ]

[ "regulates GO:0002184" ]

[ "regulates" ]

[ "GO:0002184" ]

[ "GO:0002184", "GO:0006449", "GO:2000765" ]

[ "GO:0050789", "regulates GO:0002184" ]

[]

vw

2014-12-10T15:48:55Z

false

true

8

GO:1990582

1,990,582

obsolete intracellular membrane-bounded organelle binding

molecular_function

OBSOLETE. The temporary binding of a protein or protein complex to the membrane of an intracellular membrane-bounded organelle.

[ "PMID:16100119", "PMID:9538255" ]

This term was obsoleted at the TermGenie Gatekeeper stage.

[ "intracellular membrane-bounded organelle binding", "intracellular membrane-enclosed organelle binding" ]

[ "EXACT", "EXACT" ]

[]

sl

2014-12-10T19:37:09Z

true

9

GO:1990583

1,990,583

phospholipase D activator activity

molecular_function

Binds to and increases the activity of the enzyme phospholipase D.

[ "PMID:7972129" ]

null

[]

[ "GO:0016004" ]

[ "positively_regulates GO:0004630" ]

[ "positively_regulates" ]

[ "GO:0004630" ]

[ "GO:0004630", "GO:0016004" ]

[]

sl

2014-12-10T21:04:46Z

false

true

2

GO:1990584

1,990,584

cardiac Troponin complex

cellular_component

A complex of accessory proteins (cardiac troponin T, cardiac troponin I and cardiac troponin C) found associated with actin in cardiac muscle thin filaments; involved in calcium regulation important for muscle contraction.

[ "GOC:ame", "PMID:12840750" ]

null

[ "cTnC:cTnI:cTnT" ]

[ "RELATED" ]

[]

[ "GO:0005861" ]

[]

[ "GO:0005861" ]

[]

ame

2014-12-12T16:51:41Z

false

true

4

GO:1990585

1,990,585

hydroxyproline O-arabinosyltransferase activity

molecular_function

Catalysis of the reaction: trans-4-hydroxy-L-prolyl-[protein] + UDP-beta-L-arabinofuranose = H+ + O-(beta-L-arabinofuranosyl)-trans-4-hydroxy-L-prolyl-[protein] + UDP.

[ "PMID:24036508", "RHEA:49472" ]

null

[ "HPAT" ]

[ "EXACT" ]

[]

[ "EC:2.4.2.58", "MetaCyc:RXN-15011", "RHEA:49472" ]

[ "GO:0016763" ]

[]

[ "GO:0016763" ]

[]

[ "skos:exactMatch EC:2.4.2.58", "skos:exactMatch MetaCyc:RXN-15011", "skos:exactMatch RHEA:49472", "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/28324\" xsd:anyURI" ]

tb

2014-12-12T18:22:20Z

false

true

7

GO:1990587

1,990,587

FtsQBL complex

cellular_component

A protein complex required for prokaryotic cell division (FtsZ-dependent cytokinesis). Part of the divisome. Assembled independently of the other divisome components in the cytoplasm prior to transport to the cell septum. In E. coli consists of FtsB, FtsL and FtsQ.

[ "GOC:bhm", "PMID:15165235", "PMID:21784946" ]

An example of this is FtsB in E. coli (P0A6S5) in PMID:15165235 (inferred from physical interaction).

[ "FtsB-FtsL-FtsQ complex" ]

[ "EXACT" ]

[]

[ "GO:1990586" ]

[]

[ "GO:1990586" ]

[]

bhm

2014-12-15T09:25:09Z

false

true

8

GO:1990588

1,990,588

FtsBL complex

cellular_component

A protein complex required for prokaryotic cell division (FtsZ-dependent cytokinesis). Part of the divisome. Assembled independently of the other divisome components in the cytoplasm prior to transport to the cell septum. In E. coli consists of FtsB and FtsL.

[ "GOC:bhm", "PMID:15165235", "PMID:21784946" ]

An example of this is FtsB in E. coli (P0A6S5) in PMID:15165235 (inferred from physical interaction).

[ "FtsB-FtsL complex" ]

[ "EXACT" ]

[]

[ "GO:1990586" ]

[ "part_of GO:0005829", "part_of GO:1990587" ]

[ "part_of", "part_of" ]

[ "GO:0005829", "GO:1990587" ]

[ "GO:0005829", "GO:1990586", "GO:1990587" ]

[]

bhm

2014-12-15T09:33:00Z

false

true

4

GO:1990589

1,990,589

ATF4-CREB1 transcription factor complex

cellular_component

Transcription factor complex consisting of ATF4 and CREB1 subunits that is capable of binding to cAMP response element (CRE) (consensus: 5'-GTGACGT[AC][AG]-3') as part of the positive regulation of transcription. Regulatory targets include the GRP78 (HSPA5) promoter in humans, whose activation by this complex is part o...

[ "GOC:bhm", "PMID:12871976" ]

null

[]

[ "GO:0090575" ]

[]

[ "GO:0090575" ]

[]

bhm

2014-12-15T14:22:44Z

false

true

6

GO:1990590

1,990,590

ATF1-ATF4 transcription factor complex

cellular_component

Transcription factor complex consisting of ATF1 and ATF4 subunits that is capable of binding to cAMP response element (CRE) (consensus: 5'-GTGACGT[AC][AG]-3') of the GRP78 (HSPA5) promoter. Involved in the ER stress response pathway.

[ "GOC:bhm", "PMID:12871976" ]

An example of this is ATF1in human (P18846) in PMID:12871976 (inferred from physical interaction).

[]

[ "GO:0090575" ]

[]

[ "GO:0090575" ]

[]

bhm

2014-12-15T14:25:56Z

false

true

2

GO:1990591

1,990,591

asparagine transmembrane import into vacuole

biological_process

The directed movement of asparagine into the vacuole across the vacuolar membrane.

[ "PMID:20388511" ]

null

[]

[ "GO:0032975", "GO:1903713" ]

[]

[ "GO:0032975", "GO:1903713" ]

[]

vw

2014-12-15T16:33:46Z

false

true

7

GO:1990592

1,990,592

protein K69-linked ufmylation

biological_process

A protein ufmylation process in which a polymer of the ubiquitin-like protein UFM1 is formed by linkages between lysine residues at position 69 of the UFM1 monomers, is added to a protein.

[ "PMID:25219498" ]

null

[]

[ "GO:1990564" ]

[]

[ "GO:1990564" ]

[]

jl

2014-12-15T17:01:23Z

false

true

6

GO:1990593

1,990,593

nascent polypeptide-associated complex binding

molecular_function

Binding to nascent polypeptide-associated complex, a heterodimeric protein complex that can reversibly bind to ribosomes and is located in direct proximity to newly synthesized polypeptide chains as they emerge from the ribosome.

[ "PMID:25487825" ]

null

[ "NAC binding", "NACA binding" ]

[ "EXACT", "EXACT" ]

[]

[ "GO:0044877" ]

[]

[ "GO:0044877" ]

[]

mcc

2014-12-15T22:20:45Z

false

true

5

GO:1990594

1,990,594

L-altrarate dehydratase activity

molecular_function

Catalysis of the reaction: L-altrarate = 5-dehydro-4-deoxy-D-glucarate + H2O.

[ "PMID:17649980" ]

null

[ "L-talarate dehydratase activity" ]

[ "EXACT" ]

[]

[ "RHEA:44028" ]

[ "GO:0016836" ]

[]

[ "GO:0016836" ]

[]

[ "skos:exactMatch RHEA:44028", "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/30193\" xsd:anyURI" ]

jl

2014-12-16T14:23:55Z

false

true

7

GO:1990596

1,990,596

obsolete histone H3-K4 deacetylation

biological_process

OBSOLETE. The modification of histone H3 by the removal of an acetyl group from lysine at position 4 of the histone.

[ "PMID:20299449" ]

This term was obsoleted because it represents a molecular function.

[]

[ "GO:1990162" ]

[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/24261\" xsd:anyURI" ]

al

2014-12-23T19:37:15Z

true

7

GO:1990597

1,990,597

AIP1-IRE1 complex

cellular_component

A protein complex consisting of IRE1 (inositol-requiring enzyme-1) bound to AIP1 (ASK1-interacting protein 1/DAB2-interacting protein).

[ "GOC:bf", "GOC:PARL", "PMID:18281285" ]

null

[ "AIP1-ERN1 complex", "IRE1-DAB2IP complex", "IRE1alpha-AIP1 complex" ]

[ "RELATED", "EXACT", "NARROW" ]

[]

[ "GO:0032991" ]

[]

[ "GO:0032991" ]

[]

bf

2015-01-05T15:14:35Z

false

true

2

GO:1990599

1,990,599

3' overhang single-stranded DNA endonuclease activity

molecular_function

Catalysis of the hydrolysis of ester linkages within 3' overhang single-stranded deoxyribonucleic acid by creating internal breaks.

[ "PMID:25203555" ]

null

[ "3' overhang single-stranded DNA endodeoxyribonuclease activity" ]

[ "EXACT" ]

[]

[ "EC:3.1.31.1" ]

[ "GO:0000014" ]

[]

[ "GO:0000014" ]

[]

[ "skos:narrowMatch EC:3.1.31.1", "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/31721\" xsd:anyURI" ]

al

2015-01-06T15:21:28Z

false

true

6

GO:1990600

1,990,600

single-stranded DNA endodeoxyribonuclease activator activity

molecular_function

Increases the activity of a single-stranded DNA endodeoxyribonuclease activator activity.

[ "PMID:25203555" ]

null

[]

[ "GO:0140656" ]

[ "positively_regulates GO:0000014" ]

[ "positively_regulates" ]

[ "GO:0000014" ]

[ "GO:0000014", "GO:0140656" ]

[]

al

2015-01-06T15:35:36Z

false

true

4

GO:1990601

1,990,601

5' overhang single-stranded DNA endonuclease activity

molecular_function

Catalysis of the hydrolysis of ester linkages within 5' overhang single-stranded deoxyribonucleic acid by creating internal breaks.

[ "PMID:25203555" ]

null

[ "5' overhang single-stranded DNA endodeoxyribonuclease activity" ]

[ "EXACT" ]

[]

[ "GO:0000014" ]

[]

[ "GO:0000014" ]

[]

[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/31721\" xsd:anyURI" ]

al

2015-01-06T16:24:39Z

false

true

5

GO:1990603

1,990,603

dark adaptation

biological_process

The process by which the rods of the retina gradually become fully responsive to dim light when no longer exposed to bright light.

[ "GOC:hjd", "https://www.ncbi.nlm.nih.gov/books/NBK11525/", "PMID:11420957", "PMID:35268448" ]

The proteins RGS9-1 and Gb5L localize to the rod inner segment during dark adaptation, but to the rod outer segment during light adaptation. PMID:23555598

[]

[ "GO:0071485" ]

[]

[ "GO:0071485" ]

[]

hjd

2015-01-09T20:35:46Z

false

true

8

GO:1990604

1,990,604

IRE1-TRAF2-ASK1 complex

cellular_component

A protein complex of the endoplasmic reticulum membrane that consists of IRE1 (Inositol-requiring enzyme-1), TRAF2 (TNF receptor-associated factor 2) and ASK1 (Apoptosis signal-regulating kinase 1, a MAP3K).

[ "GOC:bf", "GOC:PARL", "PMID:12050113", "PMID:23000344" ]

null

[ "ERN1-TRAF2-ASK1 complex" ]

[ "RELATED" ]

[]

[ "GO:0098796", "GO:0140534" ]

[ "part_of GO:0005789" ]

[ "part_of" ]

[ "GO:0005789" ]

[ "GO:0005789", "GO:0098796", "GO:0140534" ]

[]

bf

2015-01-13T15:03:04Z

false

true

3

GO:1990605

1,990,605

GU repeat RNA binding

molecular_function

Binding to an RNA molecule containing GU repeats.

[ "PMID:20081200" ]

null

[]

[ "GO:0003723" ]

[]

[ "GO:0003723" ]

[]

al

2015-01-13T18:18:01Z

false

true

5

GO:1990606

1,990,606

membrane scission GTPase motor activity

molecular_function

Generation of a 'twisting' activity resulting in the scission of a membrane, driven by GTP hydrolysis.

[ "PMID:11242086", "PMID:23530241", "PMID:24515348" ]

null

[]

[ "GO:0061791" ]

[]

[ "GO:0061791" ]

[]

[ "skos:broadMatch RHEA:19669", "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/28520\" xsd:anyURI" ]

vw

2015-01-19T14:26:50Z

false

true

3

GO:1990607

1,990,607

obsolete detection of stimulus involved in cytokinesis after mitosis checkpoint

biological_process

OBSOLETE. The series of events in which information about whether cytokinesis has correctly completed, is received and converted into a molecular signal, contributing to a cytokinesis after mitosis checkpoint.

[ "GOC:mtg_cell_cycle", "GOC:vw", "PMID:1234" ]

This term was obsoleted at the TermGenie Gatekeeper stage.

[]

jl

2015-01-19T14:43:34Z

true

3

GO:1990608

1,990,608

mitotic spindle pole body localization

biological_process

A process in which a mitotic spindle pole body is transported to, or maintained in, a specific cellular location.

[ "PMID:24963130" ]

null

[ "establishment and maintenance of spindle pole body localization", "establishment of spindle pole body localisation", "establishment of spindle pole body localization", "mitotic spindle pole body localization to nuclear envelope", "spindle pole body docking", "spindle pole body localisation in nuclear env...

[ "EXACT", "NARROW", "NARROW", "NARROW", "NARROW", "NARROW", "NARROW", "NARROW", "NARROW" ]

[ "GO:0070632", "GO:0071789" ]

[]

[ "GO:0070631", "GO:1903047" ]

[]

[ "GO:0070631", "GO:1903047" ]

[]

[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/19149\" xsd:anyURI" ]

vw

2009-05-06T02:35:32Z

false

true

4

GO:1990609

1,990,609

glutamate-cysteine ligase regulator activity

molecular_function

Binds to and modulates the activity of glutamate-cysteine ligase.

[ "PMID:8103521" ]

null

[]

[ "GO:0055103" ]

[ "regulates GO:0004357" ]

[ "regulates" ]

[ "GO:0004357" ]

[ "GO:0004357", "GO:0055103" ]

[]

vw

2015-01-20T12:51:13Z

false

true

1

GO:1990610

1,990,610

acetolactate synthase regulator activity

molecular_function

Binds to and modulates the activity of acetolactate synthase.

[ "PMID:8972574" ]

null

[]

[ "GO:0030234" ]

[ "regulates GO:0003984" ]

[ "regulates" ]

[ "GO:0003984" ]

[ "GO:0003984", "GO:0030234" ]

[]

vw

2015-01-20T12:54:43Z

false

true

2

GO:1990611

1,990,611

regulation of cytoplasmic translational initiation in response to stress

biological_process

Modulation of the frequency, rate or extent of cytoplasmic translational initiation as a result of a stimulus indicating the organism is under stress. The stress is usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation).

[ "PMID:16278445" ]

null

[]

[ "GO:0043558", "GO:1904688", "GO:1990497" ]

[]

[ "GO:0043558", "GO:1904688", "GO:1990497" ]

[ "GO:0065007", "part_of GO:0033554", "regulates GO:0002183" ]

[]

vw

2015-01-20T13:04:14Z

false

true

6