Datasets:
LiteFold
/
GO

Dataset card Data Studio Files
xet
 Community
go_id
string
go_numeric_id
int64
name
string
namespace
string
definition
string
definition_xrefs
list
comment
string
synonyms
list
synonym_scopes
list
alt_ids
list
subsets
list
xrefs
list
is_a_ids
list
relationship_edges
list
relationship_types
list
relationship_target_ids
list
parent_ids
list
intersection_of
list
union_of
list
disjoint_from
list
replaced_by
list
consider
list
property_values
list
created_by
string
creation_date
string
is_obsolete
bool
in_go_basic
bool
split_bucket
int64
GO:0001198
1,198
obsolete negative regulation of mating-type specific transcription from RNA polymerase II promoter
biological_process
OBSOLETE. Any mating-type specific process that stops, prevents or reduces the rate of transcription from an RNA polymerase II promoter.
[ "GOC:txnOH" ]
This term was obsoleted because it represents a GO-CAM model.
[ "down regulation of RNA polymerase II transcription, mating-type specific", "down-regulation of RNA polymerase II transcription, mating-type specific", "downregulation of RNA polymerase II transcription, mating-type specific", "inhibition of RNA polymerase II transcription, mating-type specific" ]
[ "EXACT", "EXACT", "EXACT", "NARROW" ]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/12739\" xsd:anyURI" ]
krc
2011-11-23T09:36:06Z
true
true
3
GO:0001207
1,207
obsolete histone displacement
biological_process
OBSOLETE. The removal of histones, including histone dimers, from nucleosomes within chromatin.
[ "GOC:krc", "PMID:15525516", "PMID:17496903", "PMID:21807128" ]
This term was obsoleted because it represents a molecular function.
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[ "GO:0140713" ]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/22358\" xsd:anyURI" ]
krc
2012-03-27T10:56:56Z
true
true
3
GO:0001208
1,208
obsolete histone H2A-H2B dimer displacement
biological_process
OBSOLETE. The removal of a H2A-H2B histone dimer from a nucleosome within chromatin.
[ "GOC:krc", "PMID:15525516", "PMID:17496903", "PMID:21807128" ]
This term was obsoleted because it represents a molecular function.
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[ "GO:0140713" ]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/22358\" xsd:anyURI" ]
krc
2012-03-27T11:03:40Z
true
true
6
GO:0001216
1,216
DNA-binding transcription activator activity
molecular_function
A DNA-binding transcription factor activity that activates or increases transcription of specific gene sets.
[ "GOC:txnOH-2018" ]
For usage guidance, see comment in GO:0003700 ; DNA-binding transcription factor activity.
[ "bacterial-type RNA polymerase core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription", "bacterial-type RNA polymerase transcriptional activator activity, metal ion regulated sequence-specific DNA binding", "bacterial-type RNA p...
[ "RELATED", "NARROW", "NARROW", "NARROW", "NARROW", "NARROW", "RELATED" ]
[ "GO:0001140", "GO:0001215" ]
[]
[]
[ "GO:0003700" ]
[ "part_of GO:0045893" ]
[ "part_of" ]
[ "GO:0045893" ]
[ "GO:0003700", "GO:0045893" ]
[ "GO:0140110", "has_part GO:0000976", "part_of GO:0045893" ]
[]
[]
[]
[]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/16534\" xsd:anyURI", "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/16736\" xsd:anyURI" ]
krc
2011-01-26T03:09:27Z
false
true
2
GO:0001217
1,217
DNA-binding transcription repressor activity
molecular_function
A DNA-binding transcription factor activity that represses or decreases the transcription of specific gene sets.
[ "GOC:txnOH-2018" ]
For usage guidance, see comment in GO:0003700 ; DNA-binding transcription factor activity.
[ "bacterial-type DNA binding transcription repressor activity", "bacterial-type RNA polymerase core promoter proximal region sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription", "bacterial-type RNA polymerase transcriptional repressor activity, cadmium io...
[ "NARROW", "NARROW", "NARROW", "NARROW", "NARROW", "NARROW", "NARROW", "NARROW", "NARROW", "NARROW", "NARROW", "NARROW" ]
[ "GO:0001141", "GO:0001218", "GO:0001219", "GO:0001220" ]
[]
[]
[ "GO:0003700" ]
[ "part_of GO:0045892" ]
[ "part_of" ]
[ "GO:0045892" ]
[ "GO:0003700", "GO:0045892" ]
[ "GO:0140110", "has_part GO:0000976", "part_of GO:0045892" ]
[]
[]
[]
[]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/16736\" xsd:anyURI", "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/20253\" xsd:anyURI" ]
krc
2011-01-26T03:15:45Z
false
true
4
GO:0001221
1,221
transcription coregulator binding
molecular_function
Binding to a transcription coregulator, a protein involved in regulation of transcription via protein-protein interactions with transcription factors and other transcription regulatory proteins. Cofactors do not bind DNA directly, but rather mediate protein-protein interactions between regulatory transcription factors ...
[ "GOC:krc" ]
null
[ "RNA polymerase II transcription cofactor binding", "RNA polymerase II transcription coregulator binding", "transcription cofactor binding" ]
[ "RELATED", "RELATED", "RELATED" ]
[ "GO:0001224" ]
[]
[]
[ "GO:0008134" ]
[]
[]
[]
[ "GO:0008134" ]
[]
[]
[]
[]
[]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/19354\" xsd:anyURI" ]
krc
2012-04-16T03:19:05Z
false
true
9
GO:0001222
1,222
transcription corepressor binding
molecular_function
Binding to a transcription corepressor, a protein involved in negative regulation of transcription via protein-protein interactions with transcription factors and other proteins that negatively regulate transcription. Transcription corepressors do not bind DNA directly, but rather mediate protein-protein interactions b...
[ "GOC:krc" ]
null
[ "RNA polymerase II transcription corepressor binding" ]
[ "RELATED" ]
[ "GO:0001226" ]
[]
[]
[ "GO:0001221" ]
[]
[]
[]
[ "GO:0001221" ]
[]
[]
[]
[]
[]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/19354\" xsd:anyURI" ]
krc
2012-04-16T03:27:26Z
false
true
6
GO:0001223
1,223
transcription coactivator binding
molecular_function
Binding to a transcription coactivator, a protein involved in positive regulation of transcription via protein-protein interactions with transcription factors and other proteins that positively regulate transcription. Transcription coactivators do not bind DNA directly, but rather mediate protein-protein interactions b...
[ "GOC:krc" ]
null
[ "RNA polymerase II transcription coactivator binding" ]
[ "RELATED" ]
[ "GO:0001225" ]
[]
[]
[ "GO:0001221" ]
[]
[]
[]
[ "GO:0001221" ]
[]
[]
[]
[]
[]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/19354\" xsd:anyURI" ]
krc
2012-04-16T03:30:16Z
false
true
1
GO:0001227
1,227
DNA-binding transcription repressor activity, RNA polymerase II-specific
molecular_function
A DNA-binding transcription factor activity that represses or decreases the transcription of specific gene sets transcribed by RNA polymerase II.
[ "GOC:txnOH-2018" ]
For usage guidance, see comment in GO:0003700 ; DNA-binding transcription factor activity.
[ "distal enhancer DNA-binding transcription repressor activity, RNA polymerase II-specific", "metal ion regulated core promoter proximal region sequence-specific DNA binding RNA polymerase II transcription factor activity involved in negative regulation of transcription", "metal ion regulated sequence-specific D...
[ "NARROW", "NARROW", "NARROW", "NARROW", "NARROW", "NARROW", "EXACT", "NARROW", "NARROW", "NARROW", "NARROW", "NARROW", "NARROW", "EXACT" ]
[ "GO:0001078", "GO:0001206", "GO:0001210", "GO:0001214" ]
[]
[ "Reactome:R-HSA-8936851 \"AHRR binds ARNT\"" ]
[ "GO:0000981", "GO:0001217" ]
[ "part_of GO:0000122" ]
[ "part_of" ]
[ "GO:0000122" ]
[ "GO:0000122", "GO:0000981", "GO:0001217" ]
[ "GO:0140110", "has_part GO:0000977", "part_of GO:0000122" ]
[]
[]
[]
[]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/16131\" xsd:anyURI", "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/16152\" xsd:anyURI", "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/16534\" xsd:anyURI", "term_tracker_item \"https://gi...
krc
2010-10-26T03:56:48Z
false
true
1
GO:0001228
1,228
DNA-binding transcription activator activity, RNA polymerase II-specific
molecular_function
A DNA-binding transcription factor activity that activates or increases transcription of specific gene sets transcribed by RNA polymerase II.
[ "GOC:aruk", "GOC:txnOH-2018", "PMID:20737563", "PMID:27145859" ]
For usage guidance, see comment in GO:0003700 ; DNA-binding transcription factor activity.
[ "copper ion regulated core promoter proximal region sequence-specific DNA binding RNA polymerase II transcription factor activity involved in positive regulation of transcription", "distal enhancer DNA-binding transcription activator activity, RNA polymerase II-specific", "metal ion regulated core promoter prox...
[ "NARROW", "NARROW", "NARROW", "NARROW", "NARROW", "NARROW", "NARROW", "EXACT", "NARROW", "NARROW", "NARROW", "NARROW", "NARROW", "NARROW", "NARROW", "NARROW", "NARROW", "NARROW", "EXACT", "NARROW" ]
[ "GO:0001077", "GO:0001205", "GO:0001209", "GO:0001211", "GO:0001212", "GO:0001213" ]
[]
[ "Reactome:R-HSA-8937177 \"AHR:TCDD binds ARNT\"", "Reactome:R-HSA-9856539 \"MLXIPL:MLX binds PKLR gene promoter\"", "Reactome:R-HSA-9856546 \"MLXIPL:MLX binds FASN gene promoter\"", "Reactome:R-HSA-9856548 \"MLXIPL:MLX binds ACACB gene promoter\"", "Reactome:R-HSA-9856549 \"MLXIPL:MLX binds ACLY gene promot...
[ "GO:0000981", "GO:0001216" ]
[ "part_of GO:0045944" ]
[ "part_of" ]
[ "GO:0045944" ]
[ "GO:0000981", "GO:0001216", "GO:0045944" ]
[ "GO:0140110", "has_part GO:0000977", "part_of GO:0045944" ]
[]
[]
[]
[]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/16131\" xsd:anyURI", "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/16152\" xsd:anyURI", "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/16534\" xsd:anyURI", "term_tracker_item \"https://gi...
krc
2012-01-26T03:10:20Z
false
true
1
GO:0001300
1,300
obsolete chronological cell aging
biological_process
OBSOLETE. The process associated with progression of the cell from its inception to the end of its lifespan that occurs when the cell is in a non-dividing, or quiescent, state.
[ "GOC:jh", "PMID:12044934" ]
This term was obsoleted because it represent an assay - how long the cell lives -, not a true biological process.
[ "chronological cell ageing" ]
[ "EXACT" ]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[ "GO:0044838", "GO:0090398" ]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/18632\" xsd:anyURI" ]
null
null
true
true
8
GO:0001301
1,301
obsolete progressive alteration of chromatin involved in cell aging
biological_process
OBSOLETE. Any chromatin organization process that occurs during the lifespan of the cell that results in changes in chromatin structure. Such changes may lead to gene dysregulation and ultimately to a loss in cell homeostasis, bringing about an aging phenotype.
[ "GOC:jh", "GOC:vw", "PMID:12044938" ]
This term was obsoleted because it represents a phenotype.
[ "age-dependent accumulation of genetic damage", "progressive alteration of chromatin during cell ageing", "progressive alteration of chromatin during cell aging" ]
[ "RELATED", "EXACT", "RELATED" ]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/22061\" xsd:anyURI" ]
null
null
true
true
4
GO:0001302
1,302
obsolete replicative cell aging
biological_process
OBSOLETE. The process associated with progression of the cell from its inception to the end of its lifespan that occurs as the cell continues cycles of growth and division.
[ "GOC:jh", "PMID:12044934" ]
This term was obsoleted because it represents an assay, not a true biological process.
[ "replicative cell ageing" ]
[ "EXACT" ]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[ "GO:0090399" ]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/20007\" xsd:anyURI" ]
null
null
true
true
8
GO:0001303
1,303
obsolete nucleolar fragmentation involved in replicative aging
biological_process
OBSOLETE. A nucleolar fragmentation process that gives rise to multiple rounded structures and that occurs in conjunction with increasing age in dividing cells.
[ "GOC:jh", "PMID:9891807" ]
This term was obsoleted because it represents an assay, not a true biological process.
[ "nucleolar fragmentation during replicative ageing", "nucleolar fragmentation during replicative aging" ]
[ "RELATED", "RELATED" ]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/20007\" xsd:anyURI" ]
null
null
true
true
7
GO:0001305
1,305
obsolete progressive alteration of chromatin involved in chronological cell aging
biological_process
OBSOLETE. A process that results in changes in chromatin structure contributing to chronological cell aging, occurring in non-dividing cells.
[ "GOC:dph", "GOC:jh", "GOC:tb" ]
This term was obsoleted because it represent an assay - how long the cell lives -, not a true biological process.
[ "progressive alteration of chromatin during chronological cell ageing", "progressive alteration of chromatin during chronological cell aging" ]
[ "RELATED", "RELATED" ]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[ "GO:0044838", "GO:0090398" ]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/18632\" xsd:anyURI" ]
null
null
true
true
1
GO:0001307
1,307
obsolete extrachromosomal circular DNA accumulation involved in replicative cell aging
biological_process
OBSOLETE. Increase in abundance of circular DNA molecules in dividing cells as they age. These molecules originate in the chromosome but are excised and circularized, often by intramolecular homologous recombination between direct tandem repeats, and then replicated independently of chromosomal replication.
[ "GOC:jh" ]
This term was obsoleted because it represents an assay, not a true biological process.
[ "extrachromosomal circular DNA accumulation during replicative cell ageing", "extrachromosomal circular DNA accumulation during replicative cell aging" ]
[ "RELATED", "RELATED" ]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/20007\" xsd:anyURI" ]
null
null
true
true
3
GO:0001308
1,308
obsolete negative regulation of chromatin silencing involved in replicative cell aging
biological_process
OBSOLETE. The process, which occurs as a dividing cell ages, leading to expression of genes that are typically not expressed due to silencing by regulatory proteins.
[ "GOC:jh", "PMID:12044934" ]
This term was obsoleted because it represents an assay, not a true biological process.
[ "loss of chromatin silencing during replicative cell ageing", "loss of chromatin silencing involved in replicative cell aging" ]
[ "RELATED", "EXACT" ]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/20007\" xsd:anyURI" ]
null
null
true
true
9
GO:0001309
1,309
obsolete age-dependent telomere shortening
biological_process
OBSOLETE. Progressive reduction in length of the telomeres, the termini of eukaryotic chromosomes, that occurs as part of the cellular aging process.
[ "GOC:jh", "PMID:9891807" ]
This term was made obsolete because it represents a phenotype.
[ "age-dependent telomere shortening" ]
[ "EXACT" ]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[ "GO:1903824" ]
[]
null
null
true
true
5
GO:0001310
1,310
obsolete extrachromosomal rDNA circle accumulation involved in replicative cell aging
biological_process
OBSOLETE. Increase in abundance of circular DNA molecules containing ribosomal DNA repeats in dividing cells as they age. These molecules originate in the chromosome but are excised and circularized, often by intramolecular homologous recombination between direct tandem repeats, and then replicated independently of chr...
[ "GOC:jh", "PMID:12044934" ]
This term was obsoleted because it represents an assay, not a true biological process.
[ "extrachromosomal rDNA circle accumulation during replicative cell ageing", "extrachromosomal rDNA circle accumulation during replicative cell aging", "extrachromosomal ribosomal DNA circle accumulation during replicative cell aging" ]
[ "RELATED", "RELATED", "RELATED" ]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/20007\" xsd:anyURI" ]
null
null
true
true
8
GO:0001311
1,311
obsolete formation of extrachromosomal circular rDNA by homologous recombination involved in replicative cell aging
biological_process
OBSOLETE. Excision from the chromosome and circularization of DNA molecules encoding ribosomal RNA in dividing cells as they age.
[ "GOC:jh", "PMID:12044934" ]
This term was obsoleted because it represents an assay, not a true biological process.
[ "assembly of extrachromosomal circular rDNA by homologous recombination involved in replicative cell aging", "formation of extrachromosomal circular rDNA by homologous recombination during replicative cell ageing", "formation of extrachromosomal circular rDNA by homologous recombination during replicative cell ...
[ "RELATED", "RELATED", "RELATED", "RELATED" ]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/20007\" xsd:anyURI" ]
null
null
true
true
7
GO:0001312
1,312
obsolete replication of extrachromosomal rDNA circles involved in replicative cell aging
biological_process
OBSOLETE. Replication of rDNA following its excision from the chromosome of dividing cells as they age. Extrachromosomal rDNA forms a circle that contains at least one autonomously replicating sequence (ARS), which supports replication independent of chromosomal replication.
[ "GOC:jh", "PMID:12044934" ]
This term was obsoleted because it represents an assay, not a true biological process.
[ "replication of extrachromosomal rDNA circles during replicative cell ageing", "replication of extrachromosomal rDNA circles during replicative cell aging", "replication of extrachromosomal ribosomal DNA circles during replicative cell aging" ]
[ "RELATED", "RELATED", "RELATED" ]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/20007\" xsd:anyURI" ]
null
null
true
true
8
GO:0001313
1,313
obsolete formation of extrachromosomal circular DNA involved in replicative cell aging
biological_process
OBSOLETE. Excision from the chromosome and circularization of a region of chromosomal DNA, generally, but not always, via homologous recombination between direct tandem repeats, in dividing cells as they age.
[ "GOC:jh" ]
This term was obsoleted because it represents an assay, not a true biological process.
[ "assembly of extrachromosomal circular DNA involved in replicative cell aging", "formation of extrachromosomal circular DNA during replicative cell ageing", "formation of extrachromosomal circular DNA during replicative cell aging" ]
[ "EXACT", "RELATED", "RELATED" ]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/20007\" xsd:anyURI" ]
null
null
true
true
9
GO:0001314
1,314
obsolete replication of extrachromosomal circular DNA involved in replicative cell aging
biological_process
OBSOLETE. Replication of circular DNA following excision from the chromosome of dividing cells as they age; replication of extrachromosomal circular DNA generally occurs independently of chromosomal replication.
[ "GOC:jh" ]
This term was obsoleted because it represents an assay, not a true biological process.
[ "replication of extrachromosomal circular DNA during replicative cell ageing", "replication of extrachromosomal circular DNA during replicative cell aging" ]
[ "EXACT", "RELATED" ]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/20007\" xsd:anyURI" ]
null
null
true
true
8
GO:0001315
1,315
obsolete age-dependent response to reactive oxygen species
biological_process
OBSOLETE. Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of reactive oxygen species, where the change varies according to the age of the cell or organism.
[ "GOC:jh", "PMID:12044938" ]
This term was obsoleted because it represents a phenotype.
[ "age-dependent response to active oxygen species", "age-dependent response to AOS", "age-dependent response to reactive oxidative species", "age-dependent response to reactive oxygen intermediate", "age-dependent response to ROI", "age-dependent response to ROS" ]
[ "EXACT", "EXACT", "EXACT", "EXACT", "EXACT", "EXACT" ]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[ "GO:0034599" ]
[]
null
null
true
true
8
GO:0001316
1,316
obsolete age-dependent response to reactive oxygen species involved in replicative cell aging
biological_process
OBSOLETE. Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) occurring during the process of replicative cell aging as a result of reactive oxygen species, where the change varies according to the age of the cell...
[ "GOC:jh" ]
This term was obsoleted because it represents an assay, not a true biological process.
[ "age-dependent response to active oxygen species during replicative cell aging", "age-dependent response to AOS during replicative cell aging", "age-dependent response to reactive oxidative species during replicative cell aging", "age-dependent response to reactive oxygen intermediate during replicative cell ...
[ "RELATED", "EXACT", "EXACT", "RELATED", "EXACT", "RELATED", "RELATED", "RELATED" ]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/20007\" xsd:anyURI" ]
null
null
true
true
9
GO:0001317
1,317
obsolete accumulation of oxidatively modified proteins involved in replicative cell aging
biological_process
OBSOLETE. Accumulation of proteins that have undergone reactions with reactive oxygen species in aging dividing cells and exhibit modifications such as increased protein carbonyl content, oxidized methionine, protein hydrophobicity, and cross-linking.
[ "GOC:jh" ]
This term was obsoleted because it represents an assay, not a true biological process.
[ "accumulation of oxidatively modified proteins during replicative cell ageing", "accumulation of oxidatively modified proteins during replicative cell aging" ]
[ "RELATED", "RELATED" ]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/20007\" xsd:anyURI" ]
null
null
true
true
4
GO:0001318
1,318
obsolete formation of oxidatively modified proteins involved in replicative cell aging
biological_process
OBSOLETE. Chemical reaction, between proteins and reactive oxygen species, that occurs in dividing cells as they age and leads to a variety of changes in the affected proteins, including increases in protein carbonyl content, oxidized methionine, protein hydrophobicity, and cross-linking.
[ "GOC:jh" ]
This term was obsoleted because it represents an assay, not a true biological process.
[ "formation of oxidatively modified proteins during replicative cell ageing", "formation of oxidatively modified proteins during replicative cell aging" ]
[ "RELATED", "RELATED" ]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/20007\" xsd:anyURI" ]
null
null
true
true
2
GO:0001319
1,319
obsolete inheritance of oxidatively modified proteins involved in replicative cell aging
biological_process
OBSOLETE. A protein localization process in which progeny cells acquire, or are barred from acquiring, proteins that have been altered by reaction with reactive oxygen species in dividing aging cells.
[ "GOC:jh" ]
This term was obsoleted because it represents an assay, not a true biological process.
[ "inheritance of oxidatively modified proteins during replicative cell ageing", "inheritance of oxidatively modified proteins during replicative cell aging" ]
[ "RELATED", "RELATED" ]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/20007\" xsd:anyURI" ]
null
null
true
true
1
GO:0001320
1,320
obsolete age-dependent response to reactive oxygen species involved in chronological cell aging
biological_process
OBSOLETE. Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) occurring in non-dividing cells as they age as a result of reactive oxygen species, where the change varies according to the age of the cell or organis...
[ "GOC:jh" ]
This term was obsoleted because it represent an assay - how long the cell lives -, not a true biological process.
[ "age-dependent response to active oxygen species during chronological cell aging", "age-dependent response to AOS during chronological cell aging", "age-dependent response to reactive oxidative species during chronological cell aging", "age-dependent response to reactive oxygen intermediate during chronologic...
[ "RELATED", "RELATED", "RELATED", "RELATED", "RELATED", "RELATED", "RELATED", "RELATED" ]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[ "GO:0044838", "GO:0090398" ]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/18632\" xsd:anyURI" ]
null
null
true
true
5
GO:0001321
1,321
obsolete age-dependent general metabolic decline involved in replicative cell aging
biological_process
OBSOLETE. A process of general metabolic decline that arises in dividing cells as they age, and alters cellular metabolism to cause a decline in cell function.
[ "GOC:jh", "GOC:mah" ]
This term was obsoleted because it represents an assay, not a true biological process.
[ "age-dependent general metabolic decline during replicative cell ageing", "age-dependent general metabolic decline involved in replicative cell aging" ]
[ "RELATED", "RELATED" ]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/20007\" xsd:anyURI" ]
null
null
true
true
3
GO:0001322
1,322
obsolete age-dependent response to oxidative stress involved in replicative cell aging
biological_process
OBSOLETE. Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) occurring in dividing cells as they age as a result of oxidative stress, where the change varies according to the age of the cell or organism.
[ "GOC:jh" ]
This term was obsoleted because it represents an assay, not a true biological process.
[ "age-dependent response to oxidative stress during replicative cell ageing", "age-dependent response to oxidative stress during replicative cell aging" ]
[ "RELATED", "RELATED" ]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/20007\" xsd:anyURI" ]
null
null
true
true
5
GO:0001323
1,323
obsolete age-dependent general metabolic decline involved in chronological cell aging
biological_process
OBSOLETE. A process of general metabolic decline that arises in non-dividing cells as they age, and alters cellular metabolism to cause a decline in cell function.
[ "GOC:jh", "GOC:mah" ]
This term was obsoleted because it represent an assay - how long the cell lives -, not a true biological process.
[ "age-dependent general metabolic decline during chronological cell ageing", "age-dependent general metabolic decline during chronological cell aging" ]
[ "RELATED", "RELATED" ]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[ "GO:0044838", "GO:0090398" ]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/18632\" xsd:anyURI" ]
null
null
true
true
6
GO:0001324
1,324
obsolete age-dependent response to oxidative stress involved in chronological cell aging
biological_process
OBSOLETE. Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) occurring in non-dividing cells as they age as a result of oxidative stress, where the change varies according to the age of the cell or organism.
[ "GOC:jh" ]
This term was obsoleted because it represent an assay - how long the cell lives -, not a true biological process.
[ "age-dependent response to oxidative stress during chronological cell ageing", "age-dependent response to oxidative stress during chronological cell aging" ]
[ "RELATED", "RELATED" ]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[ "GO:0044838", "GO:0090398" ]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/18632\" xsd:anyURI" ]
null
null
true
true
3
GO:0001325
1,325
formation of extrachromosomal circular DNA
biological_process
Excision from the chromosome and circularization of a region of chromosomal DNA, generally, but not always, via homologous recombination between direct tandem repeats.
[ "GOC:jh", "PMID:12044938" ]
null
[ "assembly of extrachromosomal circular DNA" ]
[ "EXACT" ]
[]
[]
[]
[ "GO:0006259", "GO:0022607" ]
[]
[]
[]
[ "GO:0006259", "GO:0022607" ]
[]
[]
[]
[]
[]
[]
null
null
false
true
8
GO:0001326
1,326
replication of extrachromosomal circular DNA
biological_process
Replication of circular DNA following excision from the chromosome; replication of extrachromosomal circular DNA generally occurs independently of chromosomal replication.
[ "GOC:jh", "PMID:33867825" ]
null
[]
[]
[]
[]
[]
[ "GO:0006261" ]
[]
[]
[]
[ "GO:0006261" ]
[]
[]
[]
[]
[]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/22572\" xsd:anyURI" ]
null
null
false
true
1
GO:0001400
1,400
mating projection base
cellular_component
The region where the mating projection meets the bulk of the cell, in unicellular fungi exposed to mating pheromone.
[ "GOC:mcc" ]
null
[ "base of shmoo tip", "conjugation tube base" ]
[ "NARROW", "NARROW" ]
[]
[]
[]
[ "GO:0110165" ]
[ "part_of GO:0005937" ]
[ "part_of" ]
[ "GO:0005937" ]
[ "GO:0005937", "GO:0110165" ]
[]
[]
[]
[]
[]
[]
null
null
false
true
5
GO:0001401
1,401
SAM complex
cellular_component
A large complex of the mitochondrial outer membrane that mediates sorting of some imported proteins to the outer membrane and their assembly in the membrane; functions after import of incoming proteins by the mitochondrial outer membrane translocase complex.
[ "PMID:12891361" ]
See also the cellular component term 'mitochondrial outer membrane translocase complex ; GO:0005742'.
[ "mitochondrial sorting and assembly machinery complex", "TOB complex" ]
[ "EXACT", "EXACT" ]
[]
[]
[]
[ "GO:0005742" ]
[]
[]
[]
[ "GO:0005742" ]
[]
[]
[]
[]
[]
[]
null
null
false
true
9
GO:0001403
1,403
invasive growth in response to glucose limitation
biological_process
A growth pattern exhibited by budding haploid cells under certain growth conditions, in which cells retain the typical axial budding pattern of haploids, but become elongated and fail to separate after division; during growth on a solid substrate, this results in penetration of cells into the agar medium. An example of...
[ "GOC:mcc", "PMID:9728395" ]
Note that this term should not be used to describe the invasion of host tissues by pathogenic organisms, which is described by the biological process term 'entry into host ; GO:0044409', nor should it be used to describe growth of diseased cells of an organism into the surrounding normal tissue, which is outside of the...
[ "colony morphology" ]
[ "RELATED" ]
[]
[ "goslim_yeast" ]
[]
[ "GO:0036267" ]
[]
[]
[]
[ "GO:0036267" ]
[]
[]
[]
[]
[]
[]
null
null
false
true
4
GO:0001404
1,404
obsolete invasive growth
biological_process
OBSOLETE. Growth of a pathogenic organism that results in penetration into cells or tissues of the host organism. This often (but not necessarily) includes a filamentous growth form, and also can include secretion of proteases and lipases to break down host tissue.
[ "GOC:mcc", "PMID:9728395" ]
This term was made obsolete because more appropriate terms were created.
[ "invasive growth", "tissue invasion" ]
[ "EXACT", "EXACT" ]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[ "GO:0044409" ]
[]
null
null
true
true
7
GO:0001405
1,405
PAM complex, Tim23 associated import motor
cellular_component
Protein complex located on the matrix side of the mitochondrial inner membrane and associated with the TIM23 mitochondrial import inner membrane translocase complex (GO:0005744); ATPase motor activity to drive import of proteins into the mitochondrial matrix.
[ "GOC:mcc", "GOC:vw", "PMID:14517234", "PMID:14638855" ]
null
[ "mitochondrial import motor", "PAM complex", "pre-sequence translocase-associated import motor", "presequence translocase-associated import motor" ]
[ "EXACT", "EXACT", "EXACT", "EXACT" ]
[]
[]
[]
[ "GO:0098800" ]
[ "part_of GO:0005744", "part_of GO:0005759" ]
[ "part_of", "part_of" ]
[ "GO:0005744", "GO:0005759" ]
[ "GO:0005744", "GO:0005759", "GO:0098800" ]
[]
[]
[]
[]
[]
[]
null
null
false
true
2
GO:0001406
1,406
glycerophosphodiester transmembrane transporter activity
molecular_function
Enables the transfer of glycerophosphodiesters from one side of a membrane to the other. Glycerophosphodiesters are small molecules composed of glycerol-3-phosphate and an alcohol, for example, glycerophosphoinositol.
[ "GOC:mcc", "PMID:12912892" ]
null
[]
[]
[]
[]
[]
[ "GO:0015605" ]
[ "part_of GO:0001407" ]
[ "part_of" ]
[ "GO:0001407" ]
[ "GO:0001407", "GO:0015605" ]
[]
[]
[]
[]
[]
[]
null
null
false
true
8
GO:0001407
1,407
glycerophosphodiester transmembrane transport
biological_process
The process in which a glycerophosphodiester is transported across a membrane. Glycerophosphodiesters are small molecules composed of glycerol-3-phosphate and an alcohol, for example, glycerophosphoinositol.
[ "GOC:mcc", "PMID:12912892" ]
null
[]
[]
[]
[]
[]
[ "GO:0015711", "GO:0015748", "GO:0055085" ]
[]
[]
[]
[ "GO:0015711", "GO:0015748", "GO:0055085" ]
[]
[]
[]
[]
[]
[]
null
null
false
true
4
GO:0001408
1,408
guanine nucleotide transport
biological_process
The directed movement of guanine nucleotides, GTP, GDP, and/or GMP, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
[ "GOC:mcc" ]
null
[]
[]
[]
[]
[]
[ "GO:0015865" ]
[]
[]
[]
[ "GO:0015865" ]
[]
[]
[]
[]
[]
[]
null
null
false
true
1
GO:0001411
1,411
hyphal tip
cellular_component
The end, or tip, of a fungal hypha, where polarized growth occurs during hyphal elongation.
[ "GOC:mcc" ]
null
[]
[]
[]
[ "goslim_candida" ]
[]
[ "GO:0030427", "GO:0051286" ]
[]
[]
[]
[ "GO:0030427", "GO:0051286" ]
[]
[]
[]
[]
[]
[]
null
null
false
true
7
GO:0001501
1,501
skeletal system development
biological_process
The process whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure. The skeleton is the bony framework of the body in vertebrates (endoskeleton) or the hard outer envelope of insects (exoskeleton or dermoskeleton).
[ "GOC:dph", "GOC:jid", "GOC:tb" ]
null
[ "skeletal development" ]
[ "EXACT" ]
[]
[]
[]
[ "GO:0048731" ]
[]
[]
[]
[ "GO:0048731" ]
[]
[]
[]
[]
[]
[]
null
null
false
true
5
GO:0001502
1,502
cartilage condensation
biological_process
The condensation of mesenchymal cells that have been committed to differentiate into chondrocytes.
[ "ISBN:0878932437" ]
null
[]
[]
[]
[]
[]
[ "GO:0098743" ]
[ "part_of GO:0048705", "part_of GO:0051216" ]
[ "part_of", "part_of" ]
[ "GO:0048705", "GO:0051216" ]
[ "GO:0048705", "GO:0051216", "GO:0098743" ]
[]
[]
[]
[]
[]
[]
null
null
false
true
6
GO:0001504
1,504
neurotransmitter uptake
biological_process
The directed movement of neurotransmitters into neurons or glial cells. This process leads to inactivation and recycling of neurotransmitters.
[ "ISBN:0123668387" ]
null
[ "neurotransmitter import", "neurotransmitter import into glial cell", "neurotransmitter import into neuron", "neurotransmitter recycling" ]
[ "EXACT", "NARROW", "NARROW", "BROAD" ]
[]
[ "goslim_synapse" ]
[ "Reactome:R-HSA-112313 \"Neurotransmitter uptake and metabolism In glial cells\"" ]
[ "GO:0006836", "GO:0098657" ]
[]
[]
[]
[ "GO:0006836", "GO:0098657" ]
[]
[]
[]
[]
[]
[]
null
null
false
true
1
GO:0001505
1,505
obsolete regulation of neurotransmitter levels
biological_process
OBSOLETE. Any process that modulates levels of neurotransmitter.
[ "GOC:jl" ]
The reason for obsoletion is that 'neurotransmitter' is unnecessary grouping in the metabolism branch of the ontology, and it creates true path violations.
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/25736\" xsd:anyURI" ]
null
null
true
true
2
GO:0001506
1,506
obsolete neurotransmitter biosynthetic process and storage
biological_process
OBSOLETE. The chemical reactions and pathways resulting in the formation of neurotransmitters and the storage of the synthesized molecules.
[ "GOC:curators", "ISBN:0123668387" ]
This term was made obsolete because it is an amalgamation of its two children.
[ "neurotransmitter anabolism and storage", "neurotransmitter biosynthetic process and storage", "neurotransmitter formation and storage", "neurotransmitter synthesis and storage" ]
[ "EXACT", "EXACT", "EXACT", "EXACT" ]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
null
null
true
true
8
GO:0001507
1,507
acetylcholine catabolic process in synaptic cleft
biological_process
The chemical reactions and pathways resulting in the breakdown of acetylcholine that occurs in the synaptic cleft during synaptic transmission.
[ "GOC:ai" ]
null
[ "acetylcholine breakdown in synaptic cleft", "acetylcholine degradation in synaptic cleft" ]
[ "EXACT", "EXACT" ]
[]
[]
[]
[ "GO:0006581" ]
[ "occurs_in GO:0043083", "part_of GO:0007271" ]
[ "occurs_in", "part_of" ]
[ "GO:0043083", "GO:0007271" ]
[ "GO:0006581", "GO:0007271", "GO:0043083" ]
[ "GO:0006581", "occurs_in GO:0043083" ]
[]
[]
[]
[]
[]
null
null
false
true
4
GO:0001508
1,508
action potential
biological_process
A process in which membrane potential cycles through a depolarizing spike, triggered in response to depolarization above some threshold, followed by repolarization. This cycle is driven by the flow of ions through various voltage gated channels with different thresholds and ion specificities.
[ "GOC:curators", "GOC:dph", "GOC:tb", "ISBN:978-0-07-139011-8" ]
Action potentials typically propagate across excitable membranes. This class covers both action potentials that propagate and those that fail to do so.
[]
[]
[]
[]
[]
[ "GO:0042391" ]
[]
[]
[]
[ "GO:0042391" ]
[]
[]
[]
[]
[]
[]
null
null
false
true
3
GO:0001509
1,509
obsolete legumain activity
molecular_function
OBSOLETE. Catalysis of the hydrolysis of proteins and small-molecule substrates at Asn-Xaa bonds.
[ "EC:3.4.22.34" ]
This term was made obsolete because it represents a gene product.
[ "asparaginyl endopeptidase activity", "bean endopeptidase activity", "citvac", "hemoglobinase activity", "legumain activity", "phaseolin activity", "proteinase B", "PRSC1 gene product (Homo sapiens)", "vicilin peptidohydrolase activity" ]
[ "RELATED", "RELATED", "RELATED", "RELATED", "EXACT", "RELATED", "RELATED", "RELATED", "RELATED" ]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[ "GO:0004197" ]
[]
[]
null
null
true
true
8
GO:0001510
1,510
RNA methylation
biological_process
Posttranscriptional addition of a methyl group to either a nucleotide or 2'-O ribose in a polyribonucleotide. Usually uses S-adenosylmethionine as a cofactor.
[ "GOC:hjd", "PMID:21823225" ]
null
[]
[]
[]
[ "gocheck_obsoletion_candidate" ]
[]
[ "GO:0009451", "GO:0043414" ]
[]
[]
[]
[ "GO:0009451", "GO:0043414" ]
[]
[]
[]
[]
[]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/27423\" xsd:anyURI" ]
null
null
false
true
9
GO:0001511
1,511
obsolete fibrillin
molecular_function
OBSOLETE. Large glycoprotein that is a calcium binding component of connective tissue microfibrils containing 34 six-cysteine (EGF-like) repeats and five eight-cysteine (TGFbeta-1 binding protein-like) repeats. Defects associated with Marfan syndrome.
[ "ISBN:0198506732" ]
This term was made obsolete because it represents a gene product.
[ "fibrillin" ]
[ "EXACT" ]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[ "GO:0001527", "GO:0005509" ]
[]
null
null
true
true
2
GO:0001512
1,512
dihydronicotinamide riboside quinone reductase activity
molecular_function
Catalysis of the reaction: 1-(beta-D-ribofuranosyl)-1,4-dihydronicotinamide + a quinone = 1-(beta-D-ribofuranosyl)nicotinamide + a hydroquinone.
[ "RHEA:12364" ]
null
[ "N-ribosyldihydronicotinamide dehydrogenase (quinone) activity", "NQO2", "NQO2 activity", "NRH:quinone oxidoreductase 2 activity", "QR2 activity", "quinone reductase 2 activity", "ribosyldihydronicotinamide dehydrogenase (quinone) activity" ]
[ "RELATED", "RELATED", "RELATED", "NARROW", "RELATED", "RELATED", "EXACT" ]
[]
[]
[ "EC:1.10.5.1", "MetaCyc:1.10.99.2-RXN", "Reactome:R-HSA-8936519 \"NQO2:FAD dimer reduces quinones to hydroquinones\"", "RHEA:12364" ]
[ "GO:0016679" ]
[]
[]
[]
[ "GO:0016679" ]
[]
[]
[]
[]
[]
[ "skos:exactMatch EC:1.10.5.1", "skos:exactMatch RHEA:12364", "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/21412\" xsd:anyURI", "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/30193\" xsd:anyURI" ]
null
null
false
true
9
GO:0001514
1,514
selenocysteine incorporation
biological_process
The incorporation of selenocysteine into a peptide; uses a special tRNA that recognizes the UGA codon as selenocysteine, rather than as a termination codon. Selenocysteine is synthesized from serine before its incorporation; it is not a posttranslational modification of peptidyl-cysteine.
[ "RESID:AA0022" ]
null
[]
[]
[]
[]
[ "RESID:AA0022" ]
[ "GO:0006451" ]
[]
[]
[]
[ "GO:0006451" ]
[]
[]
[]
[]
[]
[]
null
null
false
true
6
GO:0001515
1,515
opioid peptide activity
molecular_function
Naturally occurring peptide that is an opioid (any non-alkaloid having an opiate-like effect that can be reversed by naloxone or other recognized morphine antagonist). These include Leu- and Met-enkephalin, dynorphin and neoendorphin, alpha, beta, gamma and delta endorphins formed from beta-lipotropin, various pronase-...
[ "ISBN:0198506732" ]
null
[]
[]
[]
[ "goslim_chembl" ]
[]
[ "GO:0048018" ]
[]
[]
[]
[ "GO:0048018" ]
[]
[]
[]
[]
[]
[]
null
null
false
true
3
GO:0001516
1,516
prostaglandin biosynthetic process
biological_process
The chemical reactions and pathways resulting in the formation of prostaglandins, any of a group of biologically active metabolites which contain a cyclopentane ring.
[ "GOC:ai" ]
null
[ "prostaglandin anabolism", "prostaglandin biosynthesis", "prostaglandin formation", "prostaglandin synthesis" ]
[ "EXACT", "EXACT", "EXACT", "EXACT" ]
[]
[]
[]
[ "GO:0006693", "GO:0046457" ]
[]
[]
[]
[ "GO:0006693", "GO:0046457" ]
[]
[]
[]
[]
[]
[]
null
null
false
true
3
GO:0001517
1,517
N-acetylglucosamine 6-O-sulfotransferase activity
molecular_function
Catalysis of the reaction: 3'-phosphoadenosine 5'-phosphosulfate + N-acetyl-D-glucosamine = adenosine 3',5'-bisphosphate + N-acetyl-D-glucosamine 6-sulfate.
[ "GOC:ai", "GOC:hjd" ]
null
[ "N-acetylglucosamine 6-O-sulphotransferase activity" ]
[ "EXACT" ]
[]
[ "goslim_chembl" ]
[ "Reactome:R-HSA-2046222 \"CHST2,3,5,6 transfer sulfate to GlcNAc on keratan chain\"", "Reactome:R-HSA-3656269 \"Defective CHST6 does not transfer SO4(2-) to GlcNAc residues on keratan-PG\"", "Reactome:R-HSA-6786012 \"CHST4 transfers SO4(2-) from PAPS to Core 2 mucins\"" ]
[ "GO:0008146" ]
[]
[]
[]
[ "GO:0008146" ]
[]
[]
[]
[]
[]
[]
null
null
false
true
7
GO:0001518
1,518
voltage-gated sodium channel complex
cellular_component
A sodium channel in a cell membrane whose opening is governed by the membrane potential.
[ "ISBN:0198506732" ]
null
[ "voltage gated sodium channel complex", "voltage-dependent sodium channel complex", "voltage-sensitive sodium channel complex" ]
[ "EXACT", "EXACT", "EXACT" ]
[]
[]
[ "NIF_Subcellular:sao785001660" ]
[ "GO:0034706", "GO:0098797" ]
[]
[]
[]
[ "GO:0034706", "GO:0098797" ]
[]
[]
[]
[]
[]
[]
null
null
false
true
6
GO:0001519
1,519
peptide amidation
biological_process
The posttranslational conversion of C-terminal glycine-extended peptides to C-terminal alpha-amidated peptides. Occurs to over half of all peptide hormones to give bioactive peptides. This is a two step process catalyzed by a peptidyl-glycine alpha-hydroxylating monooxygenase and a peptidyl-alpha-hydroxyglycine alpha-a...
[ "PMID:11028916" ]
null
[]
[]
[]
[]
[]
[ "GO:0031179" ]
[]
[]
[]
[ "GO:0031179" ]
[]
[]
[]
[]
[]
[]
null
null
false
true
2
GO:0001523
1,523
retinoid metabolic process
biological_process
The chemical reactions and pathways involving retinoids, any member of a class of isoprenoids that contain or are derived from four prenyl groups linked head-to-tail. Retinoids include retinol and retinal and structurally similar natural derivatives or synthetic compounds, but need not have vitamin A activity.
[ "ISBN:0198506732" ]
null
[ "retinoid metabolism" ]
[ "EXACT" ]
[]
[]
[ "Reactome:R-HSA-2187335 \"The retinoid cycle in cones (daylight vision)\"", "Reactome:R-HSA-2453902 \"The canonical retinoid cycle in rods (twilight vision)\"", "Reactome:R-HSA-975634 \"Retinoid metabolism and transport\"" ]
[ "GO:0016101" ]
[]
[]
[]
[ "GO:0016101" ]
[]
[]
[]
[]
[]
[]
null
null
false
true
3
GO:0001525
1,525
angiogenesis
biological_process
Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels.
[ "ISBN:0878932453" ]
null
[ "blood vessel formation from pre-existing blood vessels" ]
[ "EXACT" ]
[]
[]
[ "Wikipedia:Angiogenesis" ]
[ "GO:0048646" ]
[ "part_of GO:0048514" ]
[ "part_of" ]
[ "GO:0048514" ]
[ "GO:0048514", "GO:0048646" ]
[]
[]
[]
[]
[]
[]
null
null
false
true
8
GO:0001526
1,526
obsolete proteoglycan sulfate transfer
biological_process
OBSOLETE. Transfer of sulfate to a proteoglycan (a glycoprotein whose carbohydrate units are glycosaminoglycans) using 3'-phosphoadenyl sulfate.
[ "GOC:hjd" ]
This term was made obsolete because it represents a group of molecular functions.
[ "proteoglycan sulfate transfer", "proteoglycan sulphate transfer" ]
[ "EXACT", "EXACT" ]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[ "GO:0006029", "GO:0006790", "GO:0050698" ]
[]
null
null
true
true
6
GO:0001527
1,527
microfibril
cellular_component
Extracellular matrix components occurring independently or along with elastin. Thought to have force-bearing functions in tendon. In addition to fibrillins, microfibrils may contain microfibrillar-Associated Proteins (MFAPs): MFAP1, MFAP2 (also known as MAGP-1), MFAP3, MFAP4, and MFAP5 (also known as MAGP-2).
[ "PMID:27026396", "PMID:31226403" ]
null
[ "extended fibrils", "fibrillin" ]
[ "EXACT", "RELATED" ]
[]
[]
[]
[ "GO:0099512" ]
[ "part_of GO:0071953" ]
[ "part_of" ]
[ "GO:0071953" ]
[ "GO:0071953", "GO:0099512" ]
[]
[]
[]
[]
[]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/31132\" xsd:anyURI", "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/31712\" xsd:anyURI" ]
null
null
false
true
5
GO:0001528
1,528
obsolete elastin
molecular_function
OBSOLETE. A major structural protein of mammalian connective tissues; composed of one third glycine, and also rich in proline, alanine, and valine. Chains are cross-linked together via lysine residues.
[ "ISBN:0198506732" ]
This term was made obsolete because it represents a gene product.
[ "elastin" ]
[ "EXACT" ]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[ "GO:0030023" ]
[]
[]
null
null
true
true
9
GO:0001529
1,529
obsolete elastin
cellular_component
OBSOLETE. (Was not defined before being made obsolete).
[ "GOC:mah" ]
This term was made obsolete because it represents a gene product.
[ "elastin" ]
[ "EXACT" ]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[ "GO:0030023" ]
[]
[]
null
null
true
true
6
GO:0001530
1,530
lipopolysaccharide binding
molecular_function
Binding to a lipopolysaccharide.
[ "PMID:11079463" ]
null
[ "endotoxin binding", "LPS binding" ]
[ "BROAD", "EXACT" ]
[]
[]
[]
[ "GO:0008289", "GO:0097367" ]
[]
[]
[]
[ "GO:0008289", "GO:0097367" ]
[]
[]
[]
[]
[]
[]
null
null
false
true
3
GO:0001531
1,531
interleukin-21 receptor binding
molecular_function
Binding to an interleukin-21 receptor.
[ "GOC:ai" ]
null
[ "IL-21", "interleukin-21 receptor ligand" ]
[ "NARROW", "NARROW" ]
[]
[]
[]
[ "GO:0005126" ]
[]
[]
[]
[ "GO:0005126" ]
[]
[]
[]
[]
[]
[]
null
null
false
true
5
GO:0001532
1,532
interleukin-21 receptor activity
molecular_function
Combining with interleukin-21 and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.
[ "GOC:jl", "GOC:signaling" ]
null
[ "IL-21 receptor activity", "IL-21R" ]
[ "EXACT", "EXACT" ]
[]
[]
[]
[ "GO:0004896" ]
[ "has_part GO:0019977", "part_of GO:0038114" ]
[ "has_part", "part_of" ]
[ "GO:0019977", "GO:0038114" ]
[ "GO:0004896", "GO:0019977", "GO:0038114" ]
[]
[]
[]
[]
[]
[]
null
null
false
true
1
GO:0001533
1,533
cornified envelope
cellular_component
A type of plasma membrane that has been modified through addition of distinct intracellular and extracellular components, including ceramide, found in cornifying epithelial cells (corneocytes).
[ "GOC:add", "PMID:11112355", "PMID:11590230", "PMID:15803139" ]
null
[]
[]
[]
[]
[]
[ "GO:0005886" ]
[]
[]
[]
[ "GO:0005886" ]
[]
[]
[]
[]
[]
[]
null
null
false
true
8
GO:0001534
1,534
radial spoke
cellular_component
Protein complex that links the outer microtubule doublet of a 9+2 type ciliary or flagellar axoneme with the sheath that surrounds the central pair of microtubules. Composed of a stalk that attaches to each doublet microtubule and a globular structure (spoke head) that projects toward the central pair of microtubules.
[ "GOC:krc", "ISBN:0124325653", "PMID:22118931", "PMID:25694453", "PMID:34871179", "PMID:9450971" ]
Radial spokes are involved in some types of beating motions of the cilium. The radial spoke is usually a T-shaped structure comprised of a short base that attaches to the A-microtubule of an axonemal outer microtubule doublet (MTD) of a cilium, an elongated stalk, a neck complex, and an orthogonal head structure that e...
[]
[]
[]
[ "goslim_pir" ]
[ "Wikipedia:Radial_spoke" ]
[ "GO:0032991" ]
[ "part_of GO:0005930" ]
[ "part_of" ]
[ "GO:0005930" ]
[ "GO:0005930", "GO:0032991" ]
[]
[]
[]
[]
[]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/25321\" xsd:anyURI" ]
null
null
false
true
3
GO:0001535
1,535
radial spoke head
cellular_component
Protein complex forming portion of the radial spoke that is orthogonal to the elongated stalk and which projects towards the central pair of microtubules within the ciliary or flagellum axoneme.
[ "GOC:cilia", "GOC:hjd", "GOC:krc", "PMID:22754630", "PMID:34871179" ]
null
[ "radial spokehead" ]
[ "EXACT" ]
[]
[]
[]
[ "GO:0032991" ]
[ "part_of GO:0001534" ]
[ "part_of" ]
[ "GO:0001534" ]
[ "GO:0001534", "GO:0032991" ]
[]
[]
[]
[]
[]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/25321\" xsd:anyURI" ]
null
null
false
true
9
GO:0001536
1,536
radial spoke stalk
cellular_component
Protein complex forming the elongated portion of the radial spoke between the base which binds to the A-tubule of each microtubule outer doublet and the neck which connects to the spoke head within the ciliary or flagellum axoneme.
[ "GOC:hjd", "GOC:krc", "PMID:22754630", "PMID:34871179" ]
null
[]
[]
[]
[]
[]
[ "GO:0032991" ]
[ "part_of GO:0001534" ]
[ "part_of" ]
[ "GO:0001534" ]
[ "GO:0001534", "GO:0032991" ]
[]
[]
[]
[]
[]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/25321\" xsd:anyURI" ]
null
null
false
true
2
GO:0001537
1,537
dermatan 4-sulfotransferase activity
molecular_function
Catalysis of the reaction: n 3'-phosphoadenylyl sulfate + dermatan = n adenosine 3',5'-bisphosphate + dermatan 4'-sulfate + n H+.
[ "RHEA:48052" ]
null
[ "N-acetylgalactosamine 4-O-sulfotransferase activity", "N-acetylgalactosamine 4-O-sulphotransferase activity" ]
[ "RELATED", "RELATED" ]
[]
[]
[ "EC:2.8.2.35", "Reactome:R-HSA-2022063 \"CHST14 transfers SO4(2-) to GalNAc in dermatan or DS\"", "Reactome:R-HSA-3636919 \"Defective CHST14 does not transfer SO4(2-) to GalNAc in dermatan or DS\"", "Reactome:R-HSA-6786034 \"CHST8 transfers SO4(2-) from PAPS to glyco-Lutropin\"", "RHEA:48052" ]
[ "GO:0120534" ]
[]
[]
[]
[ "GO:0120534" ]
[]
[]
[]
[]
[]
[ "skos:exactMatch EC:2.8.2.35", "skos:exactMatch RHEA:48052", "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/28380\" xsd:anyURI", "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/28776\" xsd:anyURI", "term_tracker_item \"https://github.com/geneontology/go-ontol...
null
null
false
true
3
GO:0001539
1,539
cilium or flagellum-dependent cell motility
biological_process
Cell motility due to movement of eukaryotic cilia or bacterial-type flagella or archaeal-type flagella.
[ "GOC:cilia", "GOC:hjd", "GOC:krc" ]
Note that we deem eukaryotic cilia and microtubule-based flagella to be equivalent, while the bacterial- and archaeal-type flagella have a different structure. The former are microtubule-based structures that lash back and forth and are present only in eukaryotes, while the latter achieve motility by rotation. Bacteria...
[ "ciliary or bacterial-type flagellar motility", "ciliary/flagellar motility" ]
[ "RELATED", "EXACT" ]
[]
[ "gocheck_do_not_annotate" ]
[]
[ "GO:0048870" ]
[]
[]
[]
[ "GO:0048870" ]
[]
[]
[]
[]
[]
[]
null
null
false
true
6
GO:0001540
1,540
amyloid-beta binding
molecular_function
Binding to an amyloid-beta peptide/protein.
[ "GOC:hjd" ]
null
[ "beta-amyloid binding" ]
[ "EXACT" ]
[]
[ "goslim_chembl" ]
[]
[ "GO:0042277" ]
[]
[]
[]
[ "GO:0042277" ]
[]
[]
[]
[]
[]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/20109\" xsd:anyURI" ]
null
null
false
true
7
GO:0001541
1,541
ovarian follicle development
biological_process
The process whose specific outcome is the progression of the ovarian follicle over time, from its formation to the mature structure.
[ "https://www.ncbi.nlm.nih.gov/books/NBK279054/" ]
null
[ "follicular phase" ]
[ "RELATED" ]
[]
[]
[]
[ "GO:0048856" ]
[ "part_of GO:0008585" ]
[ "part_of" ]
[ "GO:0008585" ]
[ "GO:0008585", "GO:0048856" ]
[]
[]
[]
[]
[]
[]
null
null
false
true
7
GO:0001542
1,542
ovulation from ovarian follicle
biological_process
The process leading to the rupture of the follicle, releasing the centrally located oocyte into the oviduct. An example of this is found in Mus musculus.
[ "GOC:mtg_sensu", "https://www.ncbi.nlm.nih.gov/books/NBK279054/" ]
null
[]
[]
[]
[]
[]
[ "GO:0022602", "GO:0030728" ]
[ "part_of GO:0008585" ]
[ "part_of" ]
[ "GO:0008585" ]
[ "GO:0008585", "GO:0022602", "GO:0030728" ]
[]
[]
[]
[]
[]
[]
null
null
false
true
1
GO:0001543
1,543
ovarian follicle rupture
biological_process
Disruption of theca cell layer releasing follicular fluid and/or the oocyte.
[ "https://www.ncbi.nlm.nih.gov/books/NBK279054/" ]
null
[]
[]
[]
[]
[]
[ "GO:0022602" ]
[ "part_of GO:0001542" ]
[ "part_of" ]
[ "GO:0001542" ]
[ "GO:0001542", "GO:0022602" ]
[]
[]
[]
[]
[]
[]
null
null
false
true
2
GO:0001544
1,544
initiation of primordial ovarian follicle growth
biological_process
Increase in size of primordial follicles including proliferation and shape changes of granulosa and/or theca cells until oocyte is surrounded by one layer of cuboidal shaped granulosa cells (primary follicle).
[ "https://www.ncbi.nlm.nih.gov/books/NBK279054/" ]
null
[]
[]
[]
[]
[]
[ "GO:0022602" ]
[ "part_of GO:0001541" ]
[ "part_of" ]
[ "GO:0001541" ]
[ "GO:0001541", "GO:0022602" ]
[]
[]
[]
[]
[]
[]
null
null
false
true
7
GO:0001545
1,545
primary ovarian follicle growth
biological_process
Increase in size of primary follicles including oocyte growth and granulosa and/or theca cell proliferation until more than one layer of granulosa cells is present (preantral follicle).
[ "GOC:mtg_mpo", "https://www.ncbi.nlm.nih.gov/books/NBK279054/" ]
null
[]
[]
[]
[]
[]
[ "GO:0022602", "GO:0048589" ]
[ "part_of GO:0001541" ]
[ "part_of" ]
[ "GO:0001541" ]
[ "GO:0001541", "GO:0022602", "GO:0048589" ]
[]
[]
[]
[]
[]
[]
null
null
false
true
2
GO:0001546
1,546
preantral ovarian follicle growth
biological_process
Increase in size of follicles surrounded by two or more layers of granulosa cells up to the onset of antrum formation.
[ "https://www.ncbi.nlm.nih.gov/books/NBK279054/" ]
null
[]
[]
[]
[]
[]
[ "GO:0022602", "GO:0048589" ]
[ "part_of GO:0001541", "part_of GO:0048162" ]
[ "part_of", "part_of" ]
[ "GO:0001541", "GO:0048162" ]
[ "GO:0001541", "GO:0022602", "GO:0048162", "GO:0048589" ]
[]
[]
[]
[]
[]
[]
null
null
false
true
5
GO:0001547
1,547
antral ovarian follicle growth
biological_process
Increase in size of antral follicles due to cell proliferation and/or growth of the antral cavity.
[ "https://www.ncbi.nlm.nih.gov/books/NBK279054/" ]
null
[]
[]
[]
[]
[]
[ "GO:0003006", "GO:0022602", "GO:0048589" ]
[ "part_of GO:0001541" ]
[ "part_of" ]
[ "GO:0001541" ]
[ "GO:0001541", "GO:0003006", "GO:0022602", "GO:0048589" ]
[]
[]
[]
[]
[]
[]
null
null
false
true
4
GO:0001548
1,548
follicular fluid formation in ovarian follicle antrum
biological_process
The menstrual cycle process that results in the formation of one central cavity separating the oocyte/cumulus complex from mural granulosa and theca cells during the various stages of oogenesis.
[ "GOC:dph", "GOC:tb", "https://www.ncbi.nlm.nih.gov/books/NBK279054/" ]
null
[ "ovarian follicle antrum/follicular fluid biosynthesis", "ovarian follicle antrum/follicular fluid formation" ]
[ "EXACT", "EXACT" ]
[]
[]
[]
[ "GO:0022602" ]
[ "part_of GO:0001547" ]
[ "part_of" ]
[ "GO:0001547" ]
[ "GO:0001547", "GO:0022602" ]
[]
[]
[]
[]
[]
[]
null
null
false
true
5
GO:0001549
1,549
cumulus cell differentiation
biological_process
The process in which a subpopulation of granulosa cells surrounding the oocyte acquires the specialized features of an ovarian cumulus cell.
[ "PMID:30010832" ]
null
[ "ovarian cumulus cell differentiation" ]
[ "EXACT" ]
[]
[]
[]
[ "GO:0003006", "GO:0060014" ]
[ "part_of GO:0001547", "part_of GO:0048165" ]
[ "part_of", "part_of" ]
[ "GO:0001547", "GO:0048165" ]
[ "GO:0001547", "GO:0003006", "GO:0048165", "GO:0060014" ]
[]
[]
[]
[]
[]
[]
null
null
false
true
7
GO:0001550
1,550
ovarian cumulus expansion
biological_process
Increase in size of the cumulus surrounding the oocyte including change in morphology due to proliferation and dispersion of cumulus cells.
[ "PMID:30010832" ]
null
[ "ovarian cumulus growth" ]
[ "RELATED" ]
[]
[]
[]
[ "GO:0022602", "GO:0048589" ]
[ "part_of GO:0001547", "part_of GO:0048165" ]
[ "part_of", "part_of" ]
[ "GO:0001547", "GO:0048165" ]
[ "GO:0001547", "GO:0022602", "GO:0048165", "GO:0048589" ]
[]
[]
[]
[]
[]
[]
null
null
false
true
4
GO:0001551
1,551
ovarian follicle endowment
biological_process
Association of oocytes with supporting epithelial granulosa cells to form primordial follicles.
[ "PMID:30010832" ]
null
[]
[]
[]
[]
[]
[ "GO:0022602" ]
[ "part_of GO:0001541" ]
[ "part_of" ]
[ "GO:0001541" ]
[ "GO:0001541", "GO:0022602" ]
[]
[]
[]
[]
[]
[]
null
null
false
true
3
GO:0001552
1,552
ovarian follicle atresia
biological_process
A periodic process in which immature ovarian follicles degenerate and are subsequently re-absorbed.
[ "GOC:mtg_apoptosis", "PMID:18638134" ]
null
[]
[]
[]
[]
[]
[ "GO:0003006" ]
[ "has_part GO:0097191", "part_of GO:0008585" ]
[ "has_part", "part_of" ]
[ "GO:0097191", "GO:0008585" ]
[ "GO:0003006", "GO:0008585", "GO:0097191" ]
[]
[]
[]
[]
[]
[]
null
null
false
true
4
GO:0001553
1,553
luteinization
biological_process
The set of processes resulting in differentiation of theca and granulosa cells into luteal cells and in the formation of a corpus luteum after ovulation.
[ "https://www.ncbi.nlm.nih.gov/books/NBK279054/" ]
null
[ "luteal phase" ]
[ "RELATED" ]
[]
[]
[ "Wikipedia:Luteal_phase", "Wikipedia:Luteinization" ]
[ "GO:0022602" ]
[ "part_of GO:0008585" ]
[ "part_of" ]
[ "GO:0008585" ]
[ "GO:0008585", "GO:0022602" ]
[]
[]
[]
[]
[]
[]
null
null
false
true
8
GO:0001554
1,554
luteolysis
biological_process
The lysis or structural demise of the corpus luteum. During normal luteolysis, two closely related events occur. First, there is loss of the capacity to synthesize and secrete progesterone (functional luteolysis) followed by loss of the cells that comprise the corpus luteum (structural luteolysis). Preventing luteolysi...
[ "PMID:10617764" ]
null
[]
[]
[]
[]
[ "Wikipedia:Luteolysis" ]
[ "GO:0022602" ]
[ "part_of GO:0008585" ]
[ "part_of" ]
[ "GO:0008585" ]
[ "GO:0008585", "GO:0022602" ]
[]
[]
[]
[]
[]
[]
null
null
false
true
3
GO:0001555
1,555
oocyte growth
biological_process
The developmental growth process in which an oocyte irreversibly increases in size over time by accretion and biosynthetic production of matter similar to that already present.
[ "https://www.ncbi.nlm.nih.gov/books/NBK279054/" ]
null
[]
[]
[]
[]
[]
[ "GO:0003006", "GO:0048588" ]
[ "part_of GO:0048599" ]
[ "part_of" ]
[ "GO:0048599" ]
[ "GO:0003006", "GO:0048588", "GO:0048599" ]
[]
[]
[]
[]
[]
[]
null
null
false
true
7
GO:0001556
1,556
oocyte maturation
biological_process
A developmental process, independent of morphogenetic (shape) change, that is required for an oocyte to attain its fully functional state. Oocyte maturation commences after reinitiation of meiosis commonly starting with germinal vesicle breakdown, and continues up to the second meiotic arrest prior to fertilization.
[ "GOC:devbiol", "https://www.ncbi.nlm.nih.gov/books/NBK279054/" ]
null
[]
[]
[]
[]
[ "Wikipedia:Oocyte_maturation" ]
[ "GO:0003006", "GO:0048469" ]
[ "part_of GO:0048599" ]
[ "part_of" ]
[ "GO:0048599" ]
[ "GO:0003006", "GO:0048469", "GO:0048599" ]
[]
[]
[]
[]
[]
[]
null
null
false
true
5
GO:0001557
1,557
obsolete metabolic process resulting in cell growth
biological_process
OBSOLETE. The chemical reactions that occur in living organisms that result in an increase in the mass (size) of a cell.
[ "GOC:dph" ]
This term was made obsolete as part of the metabolism rearrangements, because it is redundant with other terms.
[ "metabolic process resulting in cell growth" ]
[ "EXACT" ]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[ "GO:0008152", "GO:0016049" ]
[]
null
null
true
true
1
GO:0001559
1,559
obsolete regulation of cell growth by detection of nuclear:cytoplasmic ratio
biological_process
OBSOLETE. Any process in which the size of the nucleus with respect to the cytoplasm modulates the frequency, rate or extent of cell growth, the irreversible increase in size of a cell over time.
[ "GOC:dph" ]
This term was obsoleted because there is no evidence that this process exists.
[ "detection of nuclear:cytoplasmic ratio to regulate cell growth", "interpretation of nuclear:cytoplasmic ratio to regulate cell growth", "regulation of cell growth by nuclear:cytoplasmic ratio", "regulation of cell growth by sensing of nuclear:cytoplasmic ratio" ]
[ "EXACT", "EXACT", "EXACT", "EXACT" ]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
null
null
true
true
9
GO:0001560
1,560
regulation of cell growth by extracellular stimulus
biological_process
Any process in which external signals modulate the frequency, rate or extent of cell growth, the irreversible increase in size of a cell over time.
[ "GOC:dph" ]
null
[ "interpretation of external signals that regulate cell growth", "regulation of cell growth by detection of exogenous stimulus", "regulation of cell growth by sensing of exogenous stimulus", "regulation of growth by exogenous signal", "regulation of growth by exogenous stimuli", "regulation of growth by ex...
[ "EXACT", "EXACT", "EXACT", "EXACT", "EXACT", "EXACT", "EXACT", "EXACT", "EXACT" ]
[]
[]
[]
[ "GO:0001558" ]
[ "part_of GO:0051716" ]
[ "part_of" ]
[ "GO:0051716" ]
[ "GO:0001558", "GO:0051716" ]
[ "GO:0001558", "part_of GO:0051716" ]
[]
[]
[]
[]
[]
null
null
false
true
7
GO:0001561
1,561
fatty acid alpha-oxidation
biological_process
A metabolic pathway by which 3-methyl branched fatty acids are degraded. These compounds are not degraded by the normal peroxisomal beta-oxidation pathway, because the 3-methyl blocks the dehydrogenation of the hydroxyl group by hydroxyacyl-CoA dehydrogenase. The 3-methyl branched fatty acid is converted in several ste...
[ "PMID:10198260" ]
null
[]
[]
[]
[]
[ "MetaCyc:PWY-2501", "Reactome:R-HSA-389599 \"Alpha-oxidation of phytanate\"" ]
[ "GO:0009062", "GO:0019395" ]
[]
[]
[]
[ "GO:0009062", "GO:0019395" ]
[]
[]
[]
[]
[]
[]
null
null
false
true
2
GO:0001562
1,562
response to protozoan
biological_process
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a protozoan.
[ "GOC:ai" ]
null
[ "resistance to pathogenic protozoa", "response to protozoa", "response to protozoon" ]
[ "RELATED", "EXACT", "EXACT" ]
[ "GO:0042833" ]
[]
[]
[ "GO:0051707" ]
[]
[]
[]
[ "GO:0051707" ]
[]
[]
[]
[]
[]
[]
null
null
false
true
7
GO:0001563
1,563
detection of protozoan
biological_process
The series of events in which a stimulus from a protozoan is received and converted into a molecular signal.
[ "GOC:ai" ]
null
[ "detection of protozoa", "detection of protozoon", "perception of protozoa" ]
[ "EXACT", "EXACT", "RELATED" ]
[]
[]
[]
[ "GO:0001562", "GO:0098543" ]
[]
[]
[]
[ "GO:0001562", "GO:0098543" ]
[]
[]
[]
[]
[]
[]
null
null
false
true
4
GO:0001564
1,564
obsolete resistance to pathogenic protozoa
biological_process
OBSOLETE. (Was not defined before being made obsolete).
[ "GOC:curators" ]
This term was made obsolete because 'resistance' implies a phenotype rather than a biological process.
[ "resistance to pathogenic protozoa" ]
[ "EXACT" ]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[ "GO:0001562" ]
[]
[]
null
null
true
true
2