sha256 stringlengths 64 64 | language stringclasses 28
values | size int32 1 491k | lines int32 1 23.2k | content stringlengths 1 200k |
|---|---|---|---|---|
d938a9ddf92b9ecf248621f3502139e15b8d313c9db82a01b3f7ad6b9a81d229 | Java | 7,673 | 230 | ///////////////////////////////////////////////////////////////////////////////
// For information as to what this class does, see the Javadoc, below. //
// //
// Copyright (C) 2025 by Joseph Ramsey, Peter Spirtes, Clark Glymour, //
... |
93b62d6a468fa3b1d99b4764a22d9ccaaf89d8e81388d63c136fadf90e4fb510 | Java | 7,681 | 169 | ///////////////////////////////////////////////////////////////////////////////
// For information as to what this class does, see the Javadoc, below. //
// //
// Copyright (C) 2026 by Joseph Ramsey, Peter Spirtes, Clark Glymour, //
... |
746b4864e01041ef1156ea9767cb25f01c6815cd7736e5e6a84bdbd0ebb2ff75 | Java | 7,695 | 179 | ///////////////////////////////////////////////////////////////////////////////
// For information as to what this class does, see the Javadoc, below. //
// //
// Copyright (C) 2025 by Joseph Ramsey, Peter Spirtes, Clark Glymour, //
... |
33cff16dc60a24f5bd5102b731fb5960c628f5282b865dbab835b742650a7192 | Java | 7,707 | 165 | ///////////////////////////////////////////////////////////////////////////////
// For information as to what this class does, see the Javadoc, below. //
// //
// Copyright (C) 2025 by Joseph Ramsey, Peter Spirtes, Clark Glymour, //
... |
a6f745f99c83f8dcc17c796206a103e4a61ed19610a469323c4c8c6cfa5738d4 | Java | 7,708 | 148 | ///////////////////////////////////////////////////////////////////////////////
// For information as to what this class does, see the Javadoc, below. //
// Copyright (C) 1998, 1999, 2000, 2001, 2002, 2003, 2004, 2005, 2006, //
// 2007, 2008, 2009, 2010, 2014, 2015, 2022 by Peter Spirtes, Richard //
... |
d3029d793ad1ec930bd6549819f9c8c9ef77c347198bac2c3a34ece87fdeadcb | Java | 7,736 | 220 | ///////////////////////////////////////////////////////////////////////////////
// For information as to what this class does, see the Javadoc, below. //
// //
// Copyright (C) 2025 by Joseph Ramsey, Peter Spirtes, Clark Glymour, //
... |
a13a7a6ebf700c0d46b2d264ef4a50a25f03f04f21053a0df95f995f88741d50 | Java | 7,740 | 226 | /*-
* #%L
* Fiji distribution of ImageJ for the life sciences.
* %%
* Copyright (C) 2010 - 2026 Fiji developers.
* %%
* This program is free software: you can redistribute it and/or modify
* it under the terms of the GNU General Public License as
* published by the Free Software Foundation, either version 3 of ... |
8594454d11372e262be6411e2fb8e788893f1ef38077fbfd44ecd0305bb77cac | Java | 7,748 | 175 | ///////////////////////////////////////////////////////////////////////////////
// For information as to what this class does, see the Javadoc, below. //
// //
// Copyright (C) 2025 by Joseph Ramsey, Peter Spirtes, Clark Glymour, //
... |
a0535c703c5fe1322eed6a2e2f2747bb540664a5660ea0efea9cd04f7037e36b | Java | 7,757 | 281 | /*-
* #%L
* Fiji distribution of ImageJ for the life sciences.
* %%
* Copyright (C) 2010 - 2026 Fiji developers.
* %%
* This program is free software: you can redistribute it and/or modify
* it under the terms of the GNU General Public License as
* published by the Free Software Foundation, either version 3 of ... |
0b3bddd3a212948526ffc92ef1e8234d70ddc36b4e5e1fb1e170ff3099dbb1b7 | Java | 7,761 | 181 | /*-
* #%L
* Fiji distribution of ImageJ for the life sciences.
* %%
* Copyright (C) 2010 - 2026 Fiji developers.
* %%
* This program is free software: you can redistribute it and/or modify
* it under the terms of the GNU General Public License as
* published by the Free Software Foundation, either version 3 of ... |
e5d6700292b409cb96389bc3b912b3c30a33876dc918d838c07fc1fc0a304d1d | Java | 7,765 | 220 | ///////////////////////////////////////////////////////////////////////////////
// For information as to what this class does, see the Javadoc, below. //
// //
// Copyright (C) 2025 by Joseph Ramsey, Peter Spirtes, Clark Glymour, //
... |
5a8d73c54da5433a245b95aa33fe0159c36f675c44dc01be9350f60d6ad708cb | Java | 7,779 | 215 | ///////////////////////////////////////////////////////////////////////////////
// For information as to what this class does, see the Javadoc, below. //
// //
// Copyright (C) 2025 by Joseph Ramsey, Peter Spirtes, Clark Glymour, //
... |
1f7c389f81fb1866952f32b42e4f8d5d6731a0140a163e1b789d46a4e8a37522 | Java | 7,790 | 171 | package edu.cmu.tetradapp.editor;
import edu.cmu.tetrad.graph.Edge;
import edu.cmu.tetrad.graph.EdgeShading;
import edu.cmu.tetrad.graph.Edges;
import edu.cmu.tetrad.graph.Graph;
import edu.cmu.tetrad.graph.Node;
import edu.cmu.tetrad.graph.SemGraph;
import edu.cmu.tetrad.sem.ISemIm;
import edu.cmu.tetrad.sem.ParamTyp... |
c952bf0c4b2dedc8e69ad6b7964aeb81ccb2ea184a08b484e58197f6ae3e2c97 | Java | 7,796 | 163 | ///////////////////////////////////////////////////////////////////////////////
// For information as to what this class does, see the Javadoc, below. //
// //
// Copyright (C) 2025 by Joseph Ramsey, Peter Spirtes, Clark Glymour, //
... |
c6e2e8d82e501839341cf21386fdf852272ecda324fa7bb252eab3b51ccd1b28 | Java | 7,832 | 221 | /*-
* #%L
* Fiji distribution of ImageJ for the life sciences.
* %%
* Copyright (C) 2010 - 2026 Fiji developers.
* %%
* This program is free software: you can redistribute it and/or modify
* it under the terms of the GNU General Public License as
* published by the Free Software Foundation, either version 3 of ... |
b3318d13de82811e06cb43a0d5180675b7555bd7a45552627a30b62b01ea2137 | Java | 7,861 | 201 | /// ////////////////////////////////////////////////////////////////////////////
// Copyright (C) 2025 by Joseph Ramsey, Peter Spirtes, Clark Glymour, //
// and Richard Scheines. //
// //... |
595806fa22304a6240924f8575b17ed2ba9e0779caae6d3518255fd5c3daf21c | Java | 7,873 | 195 | ///////////////////////////////////////////////////////////////////////////////
// For information as to what this class does, see the Javadoc, below. //
// //
// Copyright (C) 2025 by Joseph Ramsey, Peter Spirtes, Clark Glymour, //
... |
5363a5b55b5ae76afe71fef174df06d92e32955435fcf98520f4158f6325a9a0 | Java | 7,876 | 201 | /*-
* #%L
* Fiji distribution of ImageJ for the life sciences.
* %%
* Copyright (C) 2010 - 2026 Fiji developers.
* %%
* This program is free software: you can redistribute it and/or modify
* it under the terms of the GNU General Public License as
* published by the Free Software Foundation, either version 3 of ... |
87ceb18ff9689f3a30c81858dc744508853cd1c6b144fb2a2720b19674858771 | Java | 7,879 | 222 | ///////////////////////////////////////////////////////////////////////////////
// For information as to what this class does, see the Javadoc, below. //
// //
// Copyright (C) 2025 by Joseph Ramsey, Peter Spirtes, Clark Glymour, //
... |
bf515156fb5bee9129019e5ad03b4a6f87be669a66cdf9e7a79175e4483a36b5 | Java | 7,884 | 226 | /*-
* #%L
* Fiji distribution of ImageJ for the life sciences.
* %%
* Copyright (C) 2010 - 2026 Fiji developers.
* %%
* This program is free software: you can redistribute it and/or modify
* it under the terms of the GNU General Public License as
* published by the Free Software Foundation, either version 3 of ... |
f1f94d6ec76fa5acac836958f69441f2e8e252543175a5ecfd447b5bdbcd5f82 | Java | 7,884 | 231 | ///////////////////////////////////////////////////////////////////////////////
// For information as to what this class does, see the Javadoc, below. //
// //
// Copyright (C) 2025 by Joseph Ramsey, Peter Spirtes, Clark Glymour, //
... |
fc9c084ef14f4a1f752b841ca09356995542b659bd4e2bd5a4b90f3a1c1a0ccb | Java | 7,891 | 245 | ///////////////////////////////////////////////////////////////////////////////
// For information as to what this class does, see the Javadoc, below. //
// //
// Copyright (C) 2025 by Joseph Ramsey, Peter Spirtes, Clark Glymour, //
... |
9112c91090aec850638dca835e1b3a8fefadd144b9dde8b76c6a027a78ec6934 | Java | 7,897 | 201 | package edu.cmu.tetrad.sem;
import edu.cmu.tetrad.util.TetradSerializable;
import java.io.Serial;
import java.util.Collections;
import java.util.List;
/**
* Result of k-fold cross-validation performed by NNEstimator#crossValidate(int).
*
* <p>Contains:
* <ul>
* <li>Per-node OOS metrics in {@link #nodeSummarie... |
f3fbfdd4cd040a4599711970ec5c25b8781004455de7e5a010c69e3b510814ee | Java | 7,899 | 190 | /// ////////////////////////////////////////////////////////////////////////////
// For information as to what this class does, see the Javadoc, below. //
// //
// Copyright (C) 2025 by Joseph Ramsey, Peter Spirtes, Clark Glymour, //... |
c61495fe3e397b2f32c67c09bda0d4e2cb98b94f3eff9055ab25d60a0f8fff09 | Java | 7,900 | 220 | ///////////////////////////////////////////////////////////////////////////////
// For information as to what this class does, see the Javadoc, below. //
// //
// Copyright (C) 2025 by Joseph Ramsey, Peter Spirtes, Clark Glymour, //
... |
1beaed6b06d40dc13d88a97d546162ac1258210428ae51cd060514850a17f1f8 | Java | 7,903 | 196 | /*-
* #%L
* Fiji distribution of ImageJ for the life sciences.
* %%
* Copyright (C) 2010 - 2026 Fiji developers.
* %%
* This program is free software: you can redistribute it and/or modify
* it under the terms of the GNU General Public License as
* published by the Free Software Foundation, either version 3 of ... |
48a1cf833dbacf25bf4406de1d17ae823ef72a6b6e42db6ca5bb910322320b7a | Java | 7,911 | 195 | /*-
* #%L
* Fiji distribution of ImageJ for the life sciences.
* %%
* Copyright (C) 2010 - 2026 Fiji developers.
* %%
* This program is free software: you can redistribute it and/or modify
* it under the terms of the GNU General Public License as
* published by the Free Software Foundation, either version 3 of ... |
b6432dbd88febf72422f2561f07841338f5fcd021ce71e3b4a7d1254cd7348c3 | Java | 7,915 | 189 | ///////////////////////////////////////////////////////////////////////////////
// For information as to what this class does, see the Javadoc, below. //
// //
// Copyright (C) 2025 by Joseph Ramsey, Peter Spirtes, Clark Glymour, //
... |
bdb6de1e83e93bf46004e695e8b5e00f450fba46e0a835e483ac21f0baa6181d | Java | 7,917 | 165 | package edu.cmu.tetradapp.editor;
import edu.cmu.tetrad.data.*;
import edu.cmu.tetrad.graph.Node;
import java.lang.reflect.Method;
import java.util.ArrayList;
import java.util.List;
/**
* Headless regression test for the Descriptive Statistics fixes. Builds an
* Auto-MPG-like dataset: continuous columns with NaN m... |
4589c5d84cddd035592956b1ce0b23a61ebcf45e68fdb814732335fe2ec80a8a | Java | 7,926 | 202 | /*
* Copyright (C) 2009 The Android Open Source Project
*
* Licensed under the Apache License, Version 2.0 (the "License");
* you may not use this file except in compliance with the License.
* You may obtain a copy of the License at
*
* http://www.apache.org/licenses/LICENSE-2.0
*
* Unless required by applicable law or... |
ca34c2d434f9c0d811229d41a9d1092faa42a149de8725c762d0bd8c89073901 | Java | 7,928 | 219 | ///////////////////////////////////////////////////////////////////////////////
// For information as to what this class does, see the Javadoc, below. //
// //
// Copyright (C) 2025 by Joseph Ramsey, Peter Spirtes, Clark Glymour, //
... |
d805b3bd3db46e60f4782ecfd0f01b036375cfdf617e7893861eefb88e4d8675 | Java | 7,941 | 219 | ///////////////////////////////////////////////////////////////////////////////
// For information as to what this class does, see the Javadoc, below. //
// //
// Copyright (C) 2025 by Joseph Ramsey, Peter Spirtes, Clark Glymour, //
... |
eb2a927d091a7775bb0c4d9ca14982a05fdca3692f6499c356ba4b49bd2704ed | Java | 7,946 | 260 | ///////////////////////////////////////////////////////////////////////////////
// For information as to what this class does, see the Javadoc, below. //
// //
// Copyright (C) 2025 by Joseph Ramsey, Peter Spirtes, Clark Glymour, //
... |
f2ed449886053cfc7e36142cf7951c46ad6a9e432e621ad8aaa49cf28eac9f3e | Java | 7,953 | 179 | /*-
* #%L
* Fiji distribution of ImageJ for the life sciences.
* %%
* Copyright (C) 2010 - 2026 Fiji developers.
* %%
* This program is free software: you can redistribute it and/or modify
* it under the terms of the GNU General Public License as
* published by the Free Software Foundation, either version 3 of ... |
29d46e9876e0385a06f65c9c0c493e5ad480dd429801e237cd238d3269e988ee | Java | 7,954 | 170 | ///////////////////////////////////////////////////////////////////////////////
// For information as to what this class does, see the Javadoc, below. //
// //
// Copyright (C) 2025 by Joseph Ramsey, Peter Spirtes, Clark Glymour, //
... |
6c02da25f05179e0f657eec63b5fdf2aacd90a3cc8db413e255b58209d17599d | Java | 7,962 | 214 | ///////////////////////////////////////////////////////////////////////////////
// For information as to what this class does, see the Javadoc, below. //
// //
// Copyright (C) 2025 by Joseph Ramsey, Peter Spirtes, Clark Glymour, //
... |
0c1a4946057e92750f94377acf36e44ca0d7e4a8288b56565c78ba555bccc5b4 | Java | 7,968 | 201 | ///////////////////////////////////////////////////////////////////////////////
// For information as to what this class does, see the Javadoc, below. //
// //
// Copyright (C) 2025 by Joseph Ramsey, Peter Spirtes, Clark Glymour, //
... |
9406768366893a014377ac96db6046abf92972bf3a805abc32a866d4861a86df | Java | 7,973 | 214 | ///////////////////////////////////////////////////////////////////////////////
// For information as to what this class does, see the Javadoc, below. //
// //
// Copyright (C) 2025 by Joseph Ramsey, Peter Spirtes, Clark Glymour, //
... |
db18b067616d8529331de8e901b89133f092cf8c2e3846c5536c50200fd5cebb | Java | 7,976 | 246 | ///////////////////////////////////////////////////////////////////////////////
// For information as to what this class does, see the Javadoc, below. //
// //
// Copyright (C) 2025 by Joseph Ramsey, Peter Spirtes, Clark Glymour, //
... |
7adb5982cb44170ca28eb1a856350d60ae61ff64fabe9c0b355da1d9e7aa3356 | Java | 7,977 | 211 | ///////////////////////////////////////////////////////////////////////////////
// For information as to what this class does, see the Javadoc, below. //
// //
// Copyright (C) 2025 by Joseph Ramsey, Peter Spirtes, Clark Glymour, //
... |
85f1aa3802a990a6153432af1b7305bcaf2b6d324347010ed43037c0d7382efa | Java | 7,980 | 181 | ///////////////////////////////////////////////////////////////////////////////
// For information as to what this class does, see the Javadoc, below. //
// //
// Copyright (C) 2025 by Joseph Ramsey, Peter Spirtes, Clark Glymour, //
... |
a8dc67b49b04e65d4f78f5e53b89fed475d32319a3a71e6616b285a7e0d95f16 | Java | 7,985 | 238 | ///////////////////////////////////////////////////////////////////////////////
// For information as to what this class does, see the Javadoc, below. //
// //
// Copyright (C) 2025 by Joseph Ramsey, Peter Spirtes, Clark Glymour, //
... |
782c02d0f64a79c39bdb083bb2d77114c9769b1aa7a83ebe67b3ed68488082c3 | Java | 7,987 | 225 | ///////////////////////////////////////////////////////////////////////////////
// For information as to what this class does, see the Javadoc, below. //
// //
// Copyright (C) 2025 by Joseph Ramsey, Peter Spirtes, Clark Glymour, //
... |
682e332f1c79d1b7a701a58481e7f06b8e54d9c4cc8faf3baaff85210b29df07 | Java | 8,000 | 244 | /*-
* #%L
* Fiji distribution of ImageJ for the life sciences.
* %%
* Copyright (C) 2010 - 2026 Fiji developers.
* %%
* This program is free software: you can redistribute it and/or modify
* it under the terms of the GNU General Public License as
* published by the Free Software Foundation, either version 3 of ... |
25342cc2b280f2e5a740f3a8014555e4c27b290419b09287864fe2030dd88bf1 | Java | 8,003 | 185 | /*-
* #%L
* Fiji distribution of ImageJ for the life sciences.
* %%
* Copyright (C) 2010 - 2026 Fiji developers.
* %%
* This program is free software: you can redistribute it and/or modify
* it under the terms of the GNU General Public License as
* published by the Free Software Foundation, either version 3 of ... |
026b1b4a08ec5a0b041b0faf205c715b493858182535668d929f29aea55c3b43 | Java | 8,005 | 215 | ///////////////////////////////////////////////////////////////////////////////
// For information as to what this class does, see the Javadoc, below. //
// //
// Copyright (C) 2025 by Joseph Ramsey, Peter Spirtes, Clark Glymour, //
... |
54b547fc4cecc67f5d6138d98c74ead4634dcdf1779d3bdb4da3a30dd32fb7d1 | Java | 8,008 | 278 | ///////////////////////////////////////////////////////////////////////////////
// For information as to what this class does, see the Javadoc, below. //
// //
// Copyright (C) 2025 by Joseph Ramsey, Peter Spirtes, Clark Glymour, //
... |
1bdf9f3ec9985041acdc68cff42317858acf08f670d6af801deba9af46422be6 | Java | 8,012 | 214 | ///////////////////////////////////////////////////////////////////////////////
// For information as to what this class does, see the Javadoc, below. //
// //
// Copyright (C) 2025 by Joseph Ramsey, Peter Spirtes, Clark Glymour, //
... |
1eca8c9a6008cd4192baefd24b0e555acd529c77051a58bd94c3bb9f0402e93b | Java | 8,033 | 267 | /*-
* #%L
* Fiji distribution of ImageJ for the life sciences.
* %%
* Copyright (C) 2010 - 2026 Fiji developers.
* %%
* This program is free software: you can redistribute it and/or modify
* it under the terms of the GNU General Public License as
* published by the Free Software Foundation, either version 3 of ... |
427417b0e051021db1aa83c589689a4c27cf002da2e91f928b276fe700128bc2 | Java | 8,039 | 197 | ///////////////////////////////////////////////////////////////////////////////
// For information as to what this class does, see the Javadoc, below. //
// //
// Copyright (C) 2025 by Joseph Ramsey, Peter Spirtes, Clark Glymour, //
... |
68fe13e0cd0dfb4980a1c5748938e8aa77ca91ebed5cd9b1c4a267b8afef218b | Java | 8,044 | 195 | ///////////////////////////////////////////////////////////////////////////////
// For information as to what this class does, see the Javadoc, below. //
// //
// Copyright (C) 2025 by Joseph Ramsey, Peter Spirtes, Clark Glymour, //
... |
f5b6d8e9623e975d8cbaf4940255adf2230b0bd22d31152869e0c0bc356085cd | Java | 8,044 | 181 | package edu.cmu.tetrad.algcomparison.score;
import edu.cmu.tetrad.annotation.General;
import edu.cmu.tetrad.annotation.Mixed;
import edu.cmu.tetrad.data.DataModel;
import edu.cmu.tetrad.data.DataSet;
import edu.cmu.tetrad.data.DataTransforms;
import edu.cmu.tetrad.data.DataType;
import edu.cmu.tetrad.graph.Node;
impor... |
9162b94e2ed7095cc37f424d34fa8539487bee912ecdbb9135855f9e0ef90aab | Java | 8,053 | 239 | ///////////////////////////////////////////////////////////////////////////////
// For information as to what this class does, see the Javadoc, below. //
// //
// Copyright (C) 2025 by Joseph Ramsey, Peter Spirtes, Clark Glymour, //
... |
9fa2cffbfeace61ee25202f34f31a169fa3646d77f2cb751d71ffae8b61fd853 | Java | 8,066 | 256 | ///////////////////////////////////////////////////////////////////////////////
// For information as to what this class does, see the Javadoc, below. //
// //
// Copyright (C) 2025 by Joseph Ramsey, Peter Spirtes, Clark Glymour, //
... |
6302abc17486bf7e2e1fe6f7ab8adb2a07b78d0a8429726539a95a1a24d9d18a | Java | 8,067 | 239 | ///////////////////////////////////////////////////////////////////////////////
// For information as to what this class does, see the Javadoc, below. //
// //
// Copyright (C) 2025 by Joseph Ramsey, Peter Spirtes, Clark Glymour, //
... |
d137c11f669a94e108ff980c6ecb814ee09d3f571a25223c24cc247674ab74eb | Java | 8,086 | 228 | ///////////////////////////////////////////////////////////////////////////////
// For information as to what this class does, see the Javadoc, below. //
// //
// Copyright (C) 2025 by Joseph Ramsey, Peter Spirtes, Clark Glymour, //
... |
84ee674e955d9b0d41a2223f871ec36341c6b47a5492a24eadfb0561ceb7771d | Java | 8,109 | 231 | /*-
* #%L
* Fiji distribution of ImageJ for the life sciences.
* %%
* Copyright (C) 2010 - 2026 Fiji developers.
* %%
* This program is free software: you can redistribute it and/or modify
* it under the terms of the GNU General Public License as
* published by the Free Software Foundation, either version 3 of ... |
958337e53c413cabdaed6ab0a0413919565e0a5264709e451c48e1a362b285e4 | Java | 8,115 | 239 | ///////////////////////////////////////////////////////////////////////////////
// For information as to what this class does, see the Javadoc, below. //
// //
// Copyright (C) 2025 by Joseph Ramsey, Peter Spirtes, Clark Glymour, //
... |
d614caf2e59df7a1635ba8d8ad6d879f32578b3e3cf6f1e03bc7dd8f5c44d943 | Java | 8,118 | 259 | package edu.cmu.tetrad.search;
import edu.cmu.tetrad.graph.*;
import edu.cmu.tetrad.util.NaturalSort;
import org.junit.Test;
import java.util.*;
import static org.junit.Assert.*;
/**
* Sanity checks for AdjustmentMultiple:
*/
public class RecursiveAdjustmentMultipleTest {
/**
* Constructor for the Recur... |
f08447213917ac58110d09694b2e992c26a6abaff1dbc0ded63da87ed92328e2 | Java | 8,119 | 195 | package edu.cmu.tetradapp.editor;
import edu.cmu.tetrad.graph.Edge;
import edu.cmu.tetrad.graph.EdgeListGraph;
import edu.cmu.tetrad.graph.Graph;
import edu.cmu.tetrad.hybridcg.HybridCgEdgeStrengths;
import edu.cmu.tetrad.hybridcg.HybridCgEdgeStrengths.Kind;
import edu.cmu.tetrad.hybridcg.HybridCgModel.HybridCgIm;
imp... |
5845cb91b74dd92cf67951230f9ef87c8f15c22509a46207d6e97830841b2f09 | Java | 8,122 | 233 | ///////////////////////////////////////////////////////////////////////////////
// For information as to what this class does, see the Javadoc, below. //
// //
// Copyright (C) 2025 by Joseph Ramsey, Peter Spirtes, Clark Glymour, //
... |
91f296c1d96140a5a71445ac035659c1d55a98484ed1e1d8fe09c56f9773006d | Java | 8,145 | 268 | ///////////////////////////////////////////////////////////////////////////////
// For information as to what this class does, see the Javadoc, below. //
// //
// Copyright (C) 2025 by Joseph Ramsey, Peter Spirtes, Clark Glymour, //
... |
d0b51771f1bd8b25098874ec6fb96fed4eab1d1e4c50ca8fda7a6b7ea7a5c716 | Java | 8,163 | 243 | /*-
* #%L
* Fiji distribution of ImageJ for the life sciences.
* %%
* Copyright (C) 2010 - 2026 Fiji developers.
* %%
* This program is free software: you can redistribute it and/or modify
* it under the terms of the GNU General Public License as
* published by the Free Software Foundation, either version 3 of ... |
ec1766baf562d77e50b3a6e29b5ae2700baec5cff9224c1a671264314dfa7485 | Java | 8,165 | 241 | ///////////////////////////////////////////////////////////////////////////////
// For information as to what this class does, see the Javadoc, below. //
// //
// Copyright (C) 2025 by Joseph Ramsey, Peter Spirtes, Clark Glymour, //
... |
6b2fea02bd9c0d773857b01a42f6c9742da8626ee43ca0fbca7b1f13691a6393 | Java | 8,176 | 176 | /// ////////////////////////////////////////////////////////////////////////////
// For information as to what this class does, see the Javadoc, below. //
// //
// Copyright (C) 2025 by Joseph Ramsey, Peter Spirtes, Clark Glymour, //... |
001ad1e06565ce5eb4f2c9e49aef9a78e33e84e881c960e3a4ea286a354c8d29 | Java | 8,203 | 195 | ///////////////////////////////////////////////////////////////////////////////
// For information as to what this class does, see the Javadoc, below. //
// //
// Copyright (C) 2025 by Joseph Ramsey, Peter Spirtes, Clark Glymour, //
... |
bf2d82bd333ad1f4d5a8b05b8464699bfc094326595a8d0c2e1158ddf1570bfb | Java | 8,203 | 306 | /*-
* #%L
* Fiji distribution of ImageJ for the life sciences.
* %%
* Copyright (C) 2010 - 2026 Fiji developers.
* %%
* This program is free software: you can redistribute it and/or modify
* it under the terms of the GNU General Public License as
* published by the Free Software Foundation, either version 3 of ... |
8158c3ae323c04dccb1b3e0251b9d4ce91ec0f43f1e94b7a84570694012e7fba | Java | 8,205 | 276 | /*-
* #%L
* Fiji distribution of ImageJ for the life sciences.
* %%
* Copyright (C) 2010 - 2026 Fiji developers.
* %%
* This program is free software: you can redistribute it and/or modify
* it under the terms of the GNU General Public License as
* published by the Free Software Foundation, either version 3 of ... |
004675f85debac24a0304c80dd25408a21cd4a1b4f41dbba6c3c7c2bb1485ad7 | Java | 8,216 | 207 | ///////////////////////////////////////////////////////////////////////////////
// For information as to what this class does, see the Javadoc, below. //
// //
// Copyright (C) 2025 by Joseph Ramsey, Peter Spirtes, Clark Glymour, //
... |
29ea0ab07c25fbbdefea43ede841d542fcf0579a15a60e3208003ae2663630fd | Java | 8,224 | 234 | ///////////////////////////////////////////////////////////////////////////////
// For information as to what this class does, see the Javadoc, below. //
// //
// Copyright (C) 2025 by Joseph Ramsey, Peter Spirtes, Clark Glymour, //
... |
62bed0347add2b436efda425157e37e4aef02610eeee2acab01bf30021fc7a31 | Java | 8,226 | 228 | ///////////////////////////////////////////////////////////////////////////////
// For information as to what this class does, see the Javadoc, below. //
// //
// Copyright (C) 2025 by Joseph Ramsey, Peter Spirtes, Clark Glymour, //
... |
5d12da7ea04425cc33374fb24870281a06cb0140feaf646ea0117ca7f8ddf395 | Java | 8,241 | 263 | ///////////////////////////////////////////////////////////////////////////////
// For information as to what this class does, see the Javadoc, below. //
// //
// Copyright (C) 2025 by Joseph Ramsey, Peter Spirtes, Clark Glymour, //
... |
e1cc91ff2a31360641100995a87b9d87ae27efd94a4dbe0d856526f2b6c8c6db | Java | 8,244 | 266 | ///////////////////////////////////////////////////////////////////////////////
// For information as to what this class does, see the Javadoc, below. //
// //
// Copyright (C) 2025 by Joseph Ramsey, Peter Spirtes, Clark Glymour, //
... |
badf749bfced25c49730c1c955907742e1dadf596d913927fadadd45d42f4387 | Java | 8,245 | 236 | /*-
* #%L
* Fiji distribution of ImageJ for the life sciences.
* %%
* Copyright (C) 2010 - 2026 Fiji developers.
* %%
* This program is free software: you can redistribute it and/or modify
* it under the terms of the GNU General Public License as
* published by the Free Software Foundation, either version 3 of ... |
93e7cdf88c3c5659e0fb1328f33ae6e8b6bf91e2276042a3bb3386b9e4965599 | Java | 8,246 | 239 | /// ////////////////////////////////////////////////////////////////////////////
// For information as to what this class does, see the Javadoc, below. //
// //
// Copyright (C) 2025 by Joseph Ramsey, Peter Spirtes, Clark Glymour, //... |
c65ecb35e1bb295fae36362b6202fd1f51b65ba8bf0c13f865d21f6489ce92b9 | Java | 8,261 | 161 | ///////////////////////////////////////////////////////////////////////////////
// For information as to what this class does, see the Javadoc, below. //
// //
// Copyright (C) 2025 by Joseph Ramsey, Peter Spirtes, Clark Glymour, //
... |
3c885ad7f5cca2f12892ca26ab10acecde83f3b6eb6088831b68fd175e33d6f0 | Java | 8,266 | 290 | /*-
* #%L
* Fiji distribution of ImageJ for the life sciences.
* %%
* Copyright (C) 2010 - 2026 Fiji developers.
* %%
* This program is free software: you can redistribute it and/or modify
* it under the terms of the GNU General Public License as
* published by the Free Software Foundation, either version 3 of ... |
502e631d8fb5dbfbacb6b5d78bcdf9f34e08ade68d17621a4eca95c233a8f201 | Java | 8,269 | 246 | ///////////////////////////////////////////////////////////////////////////////
// For information as to what this class does, see the Javadoc, below. //
// //
// Copyright (C) 2025 by Joseph Ramsey, Peter Spirtes, Clark Glymour, //
... |
3e1205aeaa1b43f9d360b482077e104697037e37e2466e637bb5364c2907a298 | Java | 8,272 | 215 | /*-
* #%L
* Fiji distribution of ImageJ for the life sciences.
* %%
* Copyright (C) 2010 - 2026 Fiji developers.
* %%
* This program is free software: you can redistribute it and/or modify
* it under the terms of the GNU General Public License as
* published by the Free Software Foundation, either version 3 of ... |
ec50193a2436f08723195d9644b360829667055de9b6323e85917a1dc4466894 | Java | 8,273 | 233 | /*-
* #%L
* Fiji distribution of ImageJ for the life sciences.
* %%
* Copyright (C) 2010 - 2026 Fiji developers.
* %%
* This program is free software: you can redistribute it and/or modify
* it under the terms of the GNU General Public License as
* published by the Free Software Foundation, either version 3 of ... |
c2cb2a0ac04816710862cb1a71ad8b2bf43ad28ad450ed0cc040baff0eb68f74 | Java | 8,275 | 218 | ///////////////////////////////////////////////////////////////////////////////
// For information as to what this class does, see the Javadoc, below. //
// //
// Copyright (C) 2025 by Joseph Ramsey, Peter Spirtes, Clark Glymour, //
... |
c09bd3f47e60a6faef13661aa3482b4f4b87009e69489eac9555751f6e3bed63 | Java | 8,279 | 290 | ///////////////////////////////////////////////////////////////////////////////
// For information as to what this class does, see the Javadoc, below. //
// //
// Copyright (C) 2025 by Joseph Ramsey, Peter Spirtes, Clark Glymour, //
... |
38539c6e80325cedcafbed305992169284c2a152ca42d6266eb2722ef5208713 | Java | 8,280 | 225 | ///////////////////////////////////////////////////////////////////////////////
// For information as to what this class does, see the Javadoc, below. //
// //
// Copyright (C) 2025 by Joseph Ramsey, Peter Spirtes, Clark Glymour, //
... |
2bcdc91de4ac32958f4d4d48e351a801741562fa5cab7eefa4198af23c85d5ab | Java | 8,281 | 252 | ///////////////////////////////////////////////////////////////////////////////
// For information as to what this class does, see the Javadoc, below. //
// //
// Copyright (C) 2025 by Joseph Ramsey, Peter Spirtes, Clark Glymour, //
... |
37caecd22eaad0906b3c684e58458f0909faf6b109158a643b0aef163cb49f08 | Java | 8,303 | 286 | ///////////////////////////////////////////////////////////////////////////////
// For information as to what this class does, see the Javadoc, below. //
// //
// Copyright (C) 2025 by Joseph Ramsey, Peter Spirtes, Clark Glymour, //
... |
1dd6d8cb05a738c8cce0e0382378a0f487fe02b572c0e97d7ceea6ec101e9b8b | Java | 8,322 | 208 | ///////////////////////////////////////////////////////////////////////////////
// For information as to what this class does, see the Javadoc, below. //
// //
// Copyright (C) 2025 by Joseph Ramsey, Peter Spirtes, Clark Glymour, //
... |
a249b8e9e5dc94c97d743d75afd60a5ff88cafa8858dd39e2d9dbe290a5f6154 | Java | 8,331 | 219 | ///////////////////////////////////////////////////////////////////////////////
// For information as to what this class does, see the Javadoc, below. //
// //
// Copyright (C) 2025 by Joseph Ramsey, Peter Spirtes, Clark Glymour, //
... |
7664d75b6fec1630527f4a18208aa2fb88af2d8b3e155f11298c026f6b43a098 | Java | 8,333 | 275 | ///////////////////////////////////////////////////////////////////////////////
// For information as to what this class does, see the Javadoc, below. //
// //
// Copyright (C) 2025 by Joseph Ramsey, Peter Spirtes, Clark Glymour, //
... |
316f48490860ef3c276146da4b5aae0fa8eb768a64a25fe932fe7c8be2e19962 | Java | 8,336 | 241 | ///////////////////////////////////////////////////////////////////////////////
// For information as to what this class does, see the Javadoc, below. //
// //
// Copyright (C) 2025 by Joseph Ramsey, Peter Spirtes, Clark Glymour, //
... |
aaba3e8f257fcbac3222cb1a58a16b672376d83fdbca5be2192173f1d3b7ed6b | Java | 8,354 | 241 | // v1: New regression helper for the adjustment effect estimator.
// v1: Purpose: (1) OLS least squares solve + predict, (2) logistic regression via IRLS.
// v1: Uses EJML 0.44.0 SimpleMatrix.
// v1: No p-values, no significance graph; just stable numeric fits.
package edu.cmu.tetrad.regression.v1;
import edu.cmu.tet... |
e5c57289ef6a91ad8a24c1eea9b7a0df7e50d8b4f2654509b059d2b888a9673d | Java | 8,355 | 318 | import libsvm.*;
import java.io.*;
import java.util.*;
class svm_train {
private svm_parameter param; // set by parse_command_line
private svm_problem prob; // set by read_problem
private svm_model model;
private String input_file_name; // set by parse_command_line
private String model_file_name; // set by pa... |
ddb33f42522f9e0c8698a2294eea9722c202ac1396356380da568ee169627b85 | Java | 8,367 | 183 | /// ////////////////////////////////////////////////////////////////////////////
// For information as to what this class does, see the Javadoc, below. //
// //
// Copyright (C) 2025 by Joseph Ramsey, Peter Spirtes, Clark Glymour, //... |
6e059280d6c5ea0f3343796ca7f12d45d62c90f236a1f90c31a710e7e07fff83 | Java | 8,378 | 253 | ///////////////////////////////////////////////////////////////////////////////
// For information as to what this class does, see the Javadoc, below. //
// //
// Copyright (C) 2025 by Joseph Ramsey, Peter Spirtes, Clark Glymour, //
... |
9dfa17435c3ba40c7c6d6d55aab94477fa905e28a063e536099d0528da9aa8b1 | Java | 8,382 | 212 | ///////////////////////////////////////////////////////////////////////////////
// For information as to what this class does, see the Javadoc, below. //
// //
// Copyright (C) 2025 by Joseph Ramsey, Peter Spirtes, Clark Glymour, //
... |
ad6bb571acc8faeb1f938cce5efa8f9c6ae16df27c861370261c45d9f9d756a2 | Java | 8,397 | 188 | /// ////////////////////////////////////////////////////////////////////////////
// For information as to what this class does, see the Javadoc, below. //
// //
// Copyright (C) 2025 by Joseph Ramsey, Peter Spirtes, Clark Glymour, //... |
56b86c371ecb40beac7cb18cfdd28b288e6428f1d445c2edba7c564156c863a0 | Java | 8,405 | 254 | ///////////////////////////////////////////////////////////////////////////////
// For information as to what this class does, see the Javadoc, below. //
// //
// Copyright (C) 2025 by Joseph Ramsey, Peter Spirtes, Clark Glymour, //
... |
1d457e5670988105a30f149b05e82e1b216e5a6ddd564ab2828cee76dbbe114d | Java | 8,411 | 224 | ///////////////////////////////////////////////////////////////////////////////
// For information as to what this class does, see the Javadoc, below. //
// //
// Copyright (C) 2025 by Joseph Ramsey, Peter Spirtes, Clark Glymour, //
... |
1f3b20523e2eb80b30ea7f173a952b5a6518196c4e83aae3c63a0d8f0eaa41f9 | Java | 8,412 | 226 | ///////////////////////////////////////////////////////////////////////////////
// For information as to what this class does, see the Javadoc, below. //
// //
// Copyright (C) 2025 by Joseph Ramsey, Peter Spirtes, Clark Glymour, //
... |
755e8ae90b38a8b9fc258a7b833f144d4385a0077f40dc84980b0fcb44a3cbc2 | Java | 8,413 | 204 | ///////////////////////////////////////////////////////////////////////////////
// For information as to what this class does, see the Javadoc, below. //
// //
// Copyright (C) 2025 by Joseph Ramsey, Peter Spirtes, Clark Glymour, //
... |
45b287385fb13db23828705e278b4e7ff6aacf3b66d0c6dc380630de2a416688 | Java | 8,418 | 207 | ///////////////////////////////////////////////////////////////////////////////
// For information as to what this class does, see the Javadoc, below. //
// //
// Copyright (C) 2025 by Joseph Ramsey, Peter Spirtes, Clark Glymour, //
... |
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