sha256 stringlengths 64 64 | language stringclasses 28
values | size int32 1 491k | lines int32 1 23.2k | content stringlengths 1 200k |
|---|---|---|---|---|
5c55216c316248f0a6a522b69c4e4ad2051df9a2a39732034850c5eaa9a25e58 | Java | 8,443 | 203 | ///////////////////////////////////////////////////////////////////////////////
// For information as to what this class does, see the Javadoc, below. //
// //
// Copyright (C) 2026 by Joseph Ramsey, Peter Spirtes, Clark Glymour, //
... |
afdc565f156fc87ea222b18df9cd6c27e9998eaed4c70c503751ac30a40d3004 | Java | 8,453 | 241 | ///////////////////////////////////////////////////////////////////////////////
// For information as to what this class does, see the Javadoc, below. //
// //
// Copyright (C) 2025 by Joseph Ramsey, Peter Spirtes, Clark Glymour, //
... |
d66da3417bbeff85f284fa42e6cac393c393874d7937c5f76a08377ad83caf5c | Java | 8,460 | 229 | ///////////////////////////////////////////////////////////////////////////////
// For information as to what this class does, see the Javadoc, below. //
// //
// Copyright (C) 2025 by Joseph Ramsey, Peter Spirtes, Clark Glymour, //
... |
6650e14470f286f87b568b31d9ebf388308e952814cc46ac28a0d2cfb4055fc3 | Java | 8,461 | 217 | ///////////////////////////////////////////////////////////////////////////////
// For information as to what this class does, see the Javadoc, below. //
// //
// Copyright (C) 2025 by Joseph Ramsey, Peter Spirtes, Clark Glymour, //
... |
5efbca4e18b3bcd44f4c8075f0619e2d9fda405e4e66c4bea34bd6cc83523eb2 | Java | 8,464 | 192 | /// ////////////////////////////////////////////////////////////////////////////
// For information as to what this class does, see the Javadoc, below. //
// //
// Copyright (C) 2025 by Joseph Ramsey, Peter Spirtes, Clark Glymour, //... |
f05a8d071b229be69309c8ab9bcaa125af675d676747b5dc929ec6c495c85385 | Java | 8,488 | 207 | /*-
* #%L
* Fiji distribution of ImageJ for the life sciences.
* %%
* Copyright (C) 2010 - 2026 Fiji developers.
* %%
* This program is free software: you can redistribute it and/or modify
* it under the terms of the GNU General Public License as
* published by the Free Software Foundation, either version 3 of ... |
1fbde79c6fa771155c07a8cadc0df3dadd1470edf9118121821956bd34907ee8 | Java | 8,492 | 237 | /*-
* #%L
* Fiji distribution of ImageJ for the life sciences.
* %%
* Copyright (C) 2010 - 2026 Fiji developers.
* %%
* This program is free software: you can redistribute it and/or modify
* it under the terms of the GNU General Public License as
* published by the Free Software Foundation, either version 3 of ... |
9b01e408593e6164bcb264fc561ef0a68c0abec747d44dc5f9ed5f9d7c05e393 | Java | 8,494 | 144 | ///////////////////////////////////////////////////////////////////////////////
// For information as to what this class does, see the Javadoc, below. //
// //
// Copyright (C) 2026 by Joseph Ramsey, Peter Spirtes, Clark Glymour, //
... |
07b386da4bf0be7137f60f6e8325855e2668bc7d6ddf6467c29e9cf92f24141a | Java | 8,495 | 266 | ///////////////////////////////////////////////////////////////////////////////
// For information as to what this class does, see the Javadoc, below. //
// //
// Copyright (C) 2025 by Joseph Ramsey, Peter Spirtes, Clark Glymour, //
... |
80328536f04cfb45de73438beb387879e1287ff1a232f3825617d5ca94e6a9f3 | Java | 8,502 | 241 | /*-
* #%L
* Fiji distribution of ImageJ for the life sciences.
* %%
* Copyright (C) 2010 - 2026 Fiji developers.
* %%
* This program is free software: you can redistribute it and/or modify
* it under the terms of the GNU General Public License as
* published by the Free Software Foundation, either version 3 of ... |
f35db0a70fa44f732647513bd7ab916acc4a4b22c10000733472be6eeb41624b | Java | 8,505 | 211 | ///////////////////////////////////////////////////////////////////////////////
// For information as to what this class does, see the Javadoc, below. //
// //
// Copyright (C) 2025 by Joseph Ramsey, Peter Spirtes, Clark Glymour, //
... |
3bb7a102d2ce91e7346103871ecb443dd7ccff15f9b3ce1334905ab293fd1f36 | Java | 8,517 | 262 | ///////////////////////////////////////////////////////////////////////////////
// For information as to what this class does, see the Javadoc, below. //
// //
// Copyright (C) 2025 by Joseph Ramsey, Peter Spirtes, Clark Glymour, //
... |
22e054e1a54c740d5631258ff121210364f93187263f8c5441ddaba639eda1c4 | Java | 8,524 | 236 | /*-
* #%L
* Fiji distribution of ImageJ for the life sciences.
* %%
* Copyright (C) 2010 - 2026 Fiji developers.
* %%
* This program is free software: you can redistribute it and/or modify
* it under the terms of the GNU General Public License as
* published by the Free Software Foundation, either version 3 of ... |
8214abeb91172a60705638c2386f804e71e937fe5eb155c10f23161381aa804c | Java | 8,538 | 258 | ///////////////////////////////////////////////////////////////////////////////
// For information as to what this class does, see the Javadoc, below. //
// //
// Copyright (C) 2025 by Joseph Ramsey, Peter Spirtes, Clark Glymour, //
... |
e49ffe19faedb1c70a039f70c35a733f14869d41babc93e85820631ec9b0649b | Java | 8,544 | 227 | ///////////////////////////////////////////////////////////////////////////////
// For information as to what this class does, see the Javadoc, below. //
// //
// Copyright (C) 2025 by Joseph Ramsey, Peter Spirtes, Clark Glymour, //
... |
37029d41b9a4746939460fe318050a708cd89f589bc510f55d7a56dc1ff73fbf | Java | 8,548 | 280 | /// ////////////////////////////////////////////////////////////////////////////
// For information as to what this class does, see the Javadoc, below. //
// //
// Copyright (C) 2025 by Joseph Ramsey, Peter Spirtes, Clark Glymour, //... |
5cf7852718017fbabe35938bb618906ad75bf291faec296c8c3d903f1324e1c0 | Java | 8,563 | 251 | /*-
* #%L
* Fiji distribution of ImageJ for the life sciences.
* %%
* Copyright (C) 2010 - 2026 Fiji developers.
* %%
* This program is free software: you can redistribute it and/or modify
* it under the terms of the GNU General Public License as
* published by the Free Software Foundation, either version 3 of ... |
591e7fbc3aba26275cb35d6b1934e07369c6f9f7e885b0fcedcf68ae3c7d3ab3 | Java | 8,567 | 227 | ///////////////////////////////////////////////////////////////////////////////
// For information as to what this class does, see the Javadoc, below. //
// //
// Copyright (C) 2025 by Joseph Ramsey, Peter Spirtes, Clark Glymour, //
... |
29d285317299ca62f050400fa844ed2908f10d5fe29aa96d2224f547870b86dc | Java | 8,577 | 226 | ///////////////////////////////////////////////////////////////////////////////
// For information as to what this class does, see the Javadoc, below. //
// //
// Copyright (C) 2025 by Joseph Ramsey, Peter Spirtes, Clark Glymour, //
... |
0b212e35b086d9617e7c5d2decf140499712545f83f4663875637fed39acfea4 | Java | 8,579 | 196 | /// ////////////////////////////////////////////////////////////////////////////
// For information as to what this class does, see the Javadoc, below. //
// //
// Copyright (C) 2025 by Joseph Ramsey, Peter Spirtes, Clark Glymour, //... |
e63a5cf086decc45f602f7b444967e8ff3c3b6f3665c9599a6a58514f3d9d692 | Java | 8,583 | 196 | package edu.cmu.tetrad.search;
import edu.cmu.tetrad.data.*;
import edu.cmu.tetrad.graph.*;
import edu.cmu.tetrad.search.score.SemBicScore;
import edu.cmu.tetrad.search.utils.TsUtils;
import edu.cmu.tetrad.sem.SemIm;
import edu.cmu.tetrad.sem.SemPm;
import org.junit.Test;
import java.text.ParseException;
import java.... |
d477ed542ccebd22479c909c8f736e25920ef65e9026335273f3d5d3e41bd603 | Java | 8,585 | 251 | ///////////////////////////////////////////////////////////////////////////////
// For information as to what this class does, see the Javadoc, below. //
// //
// Copyright (C) 2025 by Joseph Ramsey, Peter Spirtes, Clark Glymour, //
... |
204d3caf0035ea62e21aac01cae93f2296a622fe91c6ac40265fe6da520a09d2 | Java | 8,595 | 245 | ///////////////////////////////////////////////////////////////////////////////
// For information as to what this class does, see the Javadoc, below. //
// //
// Copyright (C) 2025 by Joseph Ramsey, Peter Spirtes, Clark Glymour, //
... |
44a990e85f81d01b4f1f21f4fc5d880bee2ffb791bfa99bbf92fda873b65ca60 | Java | 8,602 | 265 | ///////////////////////////////////////////////////////////////////////////////
// For information as to what this class does, see the Javadoc, below. //
// //
// Copyright (C) 2025 by Joseph Ramsey, Peter Spirtes, Clark Glymour, //
... |
24d4587597d1810f812d1d9ca2d3a7a907ec2b85d09512430c54bdd7dbf31dc6 | Java | 8,607 | 246 | ///////////////////////////////////////////////////////////////////////////////
// For information as to what this class does, see the Javadoc, below. //
// //
// Copyright (C) 2025 by Joseph Ramsey, Peter Spirtes, Clark Glymour, //
... |
2fa810d5ab473adeb2a65dc29c8804cd0486fa341f36026d89e6f8fbe96c49b8 | Java | 8,610 | 152 | ///////////////////////////////////////////////////////////////////////////////
// For information as to what this class does, see the Javadoc, below. //
// //
// Copyright (C) 2025 by Joseph Ramsey, Peter Spirtes, Clark Glymour, //
... |
de610d29ecf89caeddf3882a308386705b5227d8c3c199c94290fdd70d961295 | Java | 8,624 | 267 | /*-
* #%L
* Fiji distribution of ImageJ for the life sciences.
* %%
* Copyright (C) 2010 - 2026 Fiji developers.
* %%
* This program is free software: you can redistribute it and/or modify
* it under the terms of the GNU General Public License as
* published by the Free Software Foundation, either version 3 of ... |
d26aa53b18b2b546d8d61287ac3054ccae889175fe3bc06014f41c5c5472239a | Java | 8,625 | 204 | ///////////////////////////////////////////////////////////////////////////////
// For information as to what this class does, see the Javadoc, below. //
// //
// Copyright (C) 2025 by Joseph Ramsey, Peter Spirtes, Clark Glymour, //
... |
241467f2a50919b49d63e2ef2eb7fd32f5d670897bda112a0262da6072914a09 | Java | 8,640 | 225 | ///////////////////////////////////////////////////////////////////////////////
// For information as to what this class does, see the Javadoc, below. //
// //
// Copyright (C) 2025 by Joseph Ramsey, Peter Spirtes, Clark Glymour, //
... |
82786d36eb90a084d37c678178bbbd6fdd79fb1c8e5a95420b385c71c57ae034 | Java | 8,644 | 248 | /*-
* #%L
* Fiji distribution of ImageJ for the life sciences.
* %%
* Copyright (C) 2010 - 2026 Fiji developers.
* %%
* This program is free software: you can redistribute it and/or modify
* it under the terms of the GNU General Public License as
* published by the Free Software Foundation, either version 3 of ... |
6f74a1be34ef390fc739ed844d2adadffb8bfa9b017d4fb17665e88c2b651e00 | Java | 8,649 | 228 | ///////////////////////////////////////////////////////////////////////////////
// For information as to what this class does, see the Javadoc, below. //
// //
// Copyright (C) 2025 by Joseph Ramsey, Peter Spirtes, Clark Glymour, //
... |
4ada31c3caee69bbb3a4eb885e442699a1f41409ba21e52c8b150ed6be3c73ab | Java | 8,650 | 224 | /*-
* #%L
* Fiji distribution of ImageJ for the life sciences.
* %%
* Copyright (C) 2010 - 2026 Fiji developers.
* %%
* This program is free software: you can redistribute it and/or modify
* it under the terms of the GNU General Public License as
* published by the Free Software Foundation, either version 3 of ... |
8b51ce3b1a5c8aa65cc73e63a3082a9d0e5f9b6e9eaf3b37dc4623c1300f44c8 | Java | 8,658 | 269 | ///////////////////////////////////////////////////////////////////////////////
// For information as to what this class does, see the Javadoc, below. //
// //
// Copyright (C) 2025 by Joseph Ramsey, Peter Spirtes, Clark Glymour, //
... |
7d0f5eba578161b8d9620ce299a7411279cdb7b27c37a86dbeab7dc2a93538af | Java | 8,659 | 216 | ///////////////////////////////////////////////////////////////////////////////
// For information as to what this class does, see the Javadoc, below. //
// //
// Copyright (C) 2026 by Joseph Ramsey, Peter Spirtes, Clark Glymour, //
... |
28040a957e335ad26dd5060986d36bfd517b6c49fd179a5821d5cfc337ac41d2 | Java | 8,666 | 238 | /*-
* #%L
* Fiji distribution of ImageJ for the life sciences.
* %%
* Copyright (C) 2010 - 2026 Fiji developers.
* %%
* This program is free software: you can redistribute it and/or modify
* it under the terms of the GNU General Public License as
* published by the Free Software Foundation, either version 3 of ... |
7b4901d25e4007c237ff1e76642169ac271201d378432aa70cf280ef87d5b199 | Java | 8,673 | 244 | ///////////////////////////////////////////////////////////////////////////////
// For information as to what this class does, see the Javadoc, below. //
// //
// Copyright (C) 2025 by Joseph Ramsey, Peter Spirtes, Clark Glymour, //
... |
25f6754fe0807e90eeb5358de4eb6bc7da25ac0580cc3bfdc3a8907f68925e12 | Java | 8,707 | 204 | package edu.cmu.tetrad.algcomparison.algorithm.oracle.cpdag;
import edu.cmu.tetrad.algcomparison.algorithm.Algorithm;
import edu.cmu.tetrad.algcomparison.independence.IndependenceWrapper;
import edu.cmu.tetrad.algcomparison.utils.AcceptsKnowledge;
import edu.cmu.tetrad.algcomparison.utils.TakesIndependenceWrapper;
imp... |
485d57c0c62c2a079054ab59ec566cdd04b9adf6eaad242fdf5a99e5be36e795 | Java | 8,720 | 306 | /*-
* #%L
* Fiji distribution of ImageJ for the life sciences.
* %%
* Copyright (C) 2010 - 2026 Fiji developers.
* %%
* This program is free software: you can redistribute it and/or modify
* it under the terms of the GNU General Public License as
* published by the Free Software Foundation, either version 3 of ... |
b1ade433e5a737479c8be73feb7f2f560c1e4917cbd2d5579a5536be956f7094 | Java | 8,729 | 193 | /*-
* #%L
* Fiji distribution of ImageJ for the life sciences.
* %%
* Copyright (C) 2010 - 2026 Fiji developers.
* %%
* This program is free software: you can redistribute it and/or modify
* it under the terms of the GNU General Public License as
* published by the Free Software Foundation, either version 3 of ... |
accb70d287e301c144f7d6d63e7b72c6a1a4ec280ca2b21fa0f722fbd08fb513 | Java | 8,742 | 215 | /*-
* #%L
* Fiji distribution of ImageJ for the life sciences.
* %%
* Copyright (C) 2010 - 2026 Fiji developers.
* %%
* This program is free software: you can redistribute it and/or modify
* it under the terms of the GNU General Public License as
* published by the Free Software Foundation, either version 3 of ... |
06e22ed8b84fdf9158ae96cb12dfd31f2173681541e11ade73ccde45c82f7c1d | Java | 8,749 | 241 | ///////////////////////////////////////////////////////////////////////////////
// For information as to what this class does, see the Javadoc, below. //
// //
// Copyright (C) 2025 by Joseph Ramsey, Peter Spirtes, Clark Glymour, //
... |
75d6ef5ee66c2747ef258858a4dda5cf77ddd44ab5d8247fcfdc27a04222843b | Java | 8,750 | 200 | ///////////////////////////////////////////////////////////////////////////////
// For information as to what this class does, see the Javadoc, below. //
// //
// Copyright (C) 2025 by Joseph Ramsey, Peter Spirtes, Clark Glymour, //
... |
4a19b917f337b79bffde9e9d5c01b03625adfb7fa026ec83a85cb45e16c02740 | Java | 8,770 | 300 | ///////////////////////////////////////////////////////////////////////////////
// For information as to what this class does, see the Javadoc, below. //
// //
// Copyright (C) 2025 by Joseph Ramsey, Peter Spirtes, Clark Glymour, //
... |
68b83b68fdcc4dfac27fbb682178716aa60133b172b01472e628c26784525f0d | Java | 8,771 | 210 | ///////////////////////////////////////////////////////////////////////////////
// Copyright (C) 2025 by Joseph Ramsey, Peter Spirtes, Clark Glymour, //
// and Richard Scheines. //
// //
... |
9f3ec5d27a78ccecaf54ba167a83246051f635f559ac4531baae0757fb2cfccf | Java | 8,797 | 238 | ///////////////////////////////////////////////////////////////////////////////
// For information as to what this class does, see the Javadoc, below. //
// //
// Copyright (C) 2025 by Joseph Ramsey, Peter Spirtes, Clark Glymour, //
... |
09a07998dcdd415815dc42d11ccc80110259e8e113fc17cce66c60f3caaba96a | Java | 8,798 | 306 | /// ////////////////////////////////////////////////////////////////////////////
// For information as to what this class does, see the Javadoc, below. //
// //
// Copyright (C) 2025 by Joseph Ramsey, Peter Spirtes, Clark Glymour, //... |
c4a56f9b40b2298644eb924ffc240c81b769d2cc088015e82bdbd64861faf55b | Java | 8,798 | 272 | ///////////////////////////////////////////////////////////////////////////////
// For information as to what this class does, see the Javadoc, below. //
// //
// Copyright (C) 2025 by Joseph Ramsey, Peter Spirtes, Clark Glymour, //
... |
70b438f561a56e18de3a0848b68fab3dafaee6f7ee28ce1940b126eaba87e1d7 | Java | 8,800 | 288 | ///////////////////////////////////////////////////////////////////////////////
// For information as to what this class does, see the Javadoc, below. //
// //
// Copyright (C) 2025 by Joseph Ramsey, Peter Spirtes, Clark Glymour, //
... |
b447afdf5db51ac3b5ede404a0e8a39fca337682457c5d5d5aa87cf73f598baa | Java | 8,809 | 226 | /*-
* #%L
* Fiji distribution of ImageJ for the life sciences.
* %%
* Copyright (C) 2010 - 2026 Fiji developers.
* %%
* This program is free software: you can redistribute it and/or modify
* it under the terms of the GNU General Public License as
* published by the Free Software Foundation, either version 3 of ... |
94e1af5f5243a5b60fa26227d171470942b26d3a96661f220aec38aa556dc5b7 | Java | 8,810 | 237 | ///////////////////////////////////////////////////////////////////////////////
// For information as to what this class does, see the Javadoc, below. //
// //
// Copyright (C) 2025 by Joseph Ramsey, Peter Spirtes, Clark Glymour, //
... |
e3f4b636749d0c7857ac7eaa8c34b1e3620f16acf6cd3d6f37d6ea2941cca22b | Java | 8,834 | 241 | ///////////////////////////////////////////////////////////////////////////////
// For information as to what this class does, see the Javadoc, below. //
// //
// Copyright (C) 2025 by Joseph Ramsey, Peter Spirtes, Clark Glymour, //
... |
a9195c172e60a27b9c61aec782cd1deab3f9c67b8321e82bbaf1cb5001dbe53e | Java | 8,838 | 236 | ///////////////////////////////////////////////////////////////////////////////
// For information as to what this class does, see the Javadoc, below. //
// //
// Copyright (C) 2025 by Joseph Ramsey, Peter Spirtes, Clark Glymour, //
... |
9f79c566012b51306a6373572d3100ad7325bc70431ff47c38fc133cd3d9be2c | Java | 8,850 | 230 | ///////////////////////////////////////////////////////////////////////////////
// For information as to what this class does, see the Javadoc, below. //
// //
// Copyright (C) 2025 by Joseph Ramsey, Peter Spirtes, Clark Glymour, //
... |
e49e3d2ac1cfeed44941f60079035d8b375fc5e2e7aff1b0e118319293f91136 | Java | 8,860 | 243 | ///////////////////////////////////////////////////////////////////////////////
// For information as to what this class does, see the Javadoc, below. //
// //
// Copyright (C) 2025 by Joseph Ramsey, Peter Spirtes, Clark Glymour, //
... |
6933e6e25fb1ae4e077d8e5a24bedb0fa86522cfc1ad3cd3f58a266bd4dc74ab | Java | 8,878 | 209 | ///////////////////////////////////////////////////////////////////////////////
// For information as to what this class does, see the Javadoc, below. //
// //
// Copyright (C) 2026 by Joseph Ramsey, Peter Spirtes, Clark Glymour, //
... |
f4936396d70b8d8913cc9afe6c92a63b941c6dd103843cf22b17f7c915844474 | Java | 8,880 | 127 | /// ////////////////////////////////////////////////////////////////////////////
// For information as to what this class does, see the Javadoc, below. //
// //
// Copyright (C) 2025 by Joseph Ramsey, Peter Spirtes, Clark Glymour, //... |
5d966b4b3fe8ac61fb623f374335f670695d04aaa8f6b53d0d4a6945a48baefe | Java | 8,884 | 217 | ///////////////////////////////////////////////////////////////////////////////
// For information as to what this class does, see the Javadoc, below. //
// //
// Copyright (C) 2025 by Joseph Ramsey, Peter Spirtes, Clark Glymour, //
... |
a1f3bc2285ed5708c9227d42b622f8d802a78a8942e7e8e34e3d5739182cfa17 | Java | 8,889 | 207 | ///////////////////////////////////////////////////////////////////////////////
// For information as to what this class does, see the Javadoc, below. //
// //
// Copyright (C) 2025 by Joseph Ramsey, Peter Spirtes, Clark Glymour, //
... |
b0d03c0f4af49d8e0a282f9ce26ab208ae07ff54d7e80e00dd3ef191f7c37651 | Java | 8,898 | 260 | ///////////////////////////////////////////////////////////////////////////////
// For information as to what this class does, see the Javadoc, below. //
// //
// Copyright (C) 2025 by Joseph Ramsey, Peter Spirtes, Clark Glymour, //
... |
2e296083347327d343191449074b4049ab3ea06f194d0c5881faa2731d91c321 | Java | 8,906 | 234 | ///////////////////////////////////////////////////////////////////////////////
// For information as to what this class does, see the Javadoc, below. //
// //
// Copyright (C) 2025 by Joseph Ramsey, Peter Spirtes, Clark Glymour, //
... |
3709cd18fa812cc12c61b44bfd485df854ec7d0e457bf975b870e789af2603d8 | Java | 8,906 | 266 | /*-
* #%L
* Fiji distribution of ImageJ for the life sciences.
* %%
* Copyright (C) 2010 - 2026 Fiji developers.
* %%
* This program is free software: you can redistribute it and/or modify
* it under the terms of the GNU General Public License as
* published by the Free Software Foundation, either version 3 of ... |
cdbc298e8d86c627f2dae2ad45fb89927a17b3cd5e95c82922d3862e5e2475b7 | Java | 8,909 | 251 | /*-
* #%L
* Fiji distribution of ImageJ for the life sciences.
* %%
* Copyright (C) 2010 - 2026 Fiji developers.
* %%
* This program is free software: you can redistribute it and/or modify
* it under the terms of the GNU General Public License as
* published by the Free Software Foundation, either version 3 of ... |
a4a2b6f87c46fde2f39ef2b430d24c9d8388a488301d5a9a5b0fc0277d6f015c | Java | 8,913 | 203 | ///////////////////////////////////////////////////////////////////////////////
// For information as to what this class does, see the Javadoc, below. //
// //
// Copyright (C) 2025 by Joseph Ramsey, Peter Spirtes, Clark Glymour, //
... |
2f802f1d7e69e203eee22864a0740e213dc9b5ad0b2d55388ccd80750143deb8 | Java | 8,923 | 224 | ///////////////////////////////////////////////////////////////////////////////
// For information as to what this class does, see the Javadoc, below. //
// //
// Copyright (C) 2025 by Joseph Ramsey, Peter Spirtes, Clark Glymour, //
... |
17029b0761316150e425e7646d0b2d7e7fd005957b35cde16a5cdebefa4b526e | Java | 8,944 | 350 | import libsvm.*;
import java.io.*;
import java.util.*;
import java.text.DecimalFormat;
class svm_scale
{
private String line = null;
private double lower = -1.0;
private double upper = 1.0;
private double y_lower;
private double y_upper;
private boolean y_scaling = false;
private double[] feature_max;
private ... |
89b5a1033e61b9a3d5d58f8fdbd03caebfa1000f8360bf49414ad22c9b6ed4de | Java | 8,948 | 242 | ///////////////////////////////////////////////////////////////////////////////
// For information as to what this class does, see the Javadoc, below. //
// //
// Copyright (C) 2025 by Joseph Ramsey, Peter Spirtes, Clark Glymour, //
... |
2dcf34fd0433110f530c7817cd09ed37b26ddec5fd9c258a381f90a7f754e8d3 | Java | 8,952 | 242 | ///////////////////////////////////////////////////////////////////////////////
// For information as to what this class does, see the Javadoc, below. //
// //
// Copyright (C) 2025 by Joseph Ramsey, Peter Spirtes, Clark Glymour, //
... |
6f89024c4aa35b493373c1c0aad2fbe0a484fe7d72df5813120ca404e8306875 | Java | 8,957 | 269 | ///////////////////////////////////////////////////////////////////////////////
// For information as to what this class does, see the Javadoc, below. //
// //
// Copyright (C) 2025 by Joseph Ramsey, Peter Spirtes, Clark Glymour, //
... |
74c3a6c5cd17e0edaf3699c91ca42b6799007334f8be4e73464b5fb3aea67fbf | Java | 8,970 | 253 | /// ////////////////////////////////////////////////////////////////////////////
// For information as to what this class does, see the Javadoc, below. //
// //
// Copyright (C) 2025 by Joseph Ramsey, Peter Spirtes, Clark Glymour, //... |
e3826922e5153ad1fb2f3e7732307596f08ca1598b1377bc0fbb1c07ddb6f8f2 | Java | 8,978 | 279 | ///////////////////////////////////////////////////////////////////////////////
// For information as to what this class does, see the Javadoc, below. //
// //
// Copyright (C) 2025 by Joseph Ramsey, Peter Spirtes, Clark Glymour, //
... |
32a8e08024db4ac38351a5a38c7d7392581637df216e54ac53d831456d37fd73 | Java | 9,005 | 221 | /*-
* #%L
* Fiji distribution of ImageJ for the life sciences.
* %%
* Copyright (C) 2010 - 2026 Fiji developers.
* %%
* This program is free software: you can redistribute it and/or modify
* it under the terms of the GNU General Public License as
* published by the Free Software Foundation, either version 3 of ... |
384d77548c02eb53f1b59ef381660de792525a7bddf9256dc2054a33c5084a6d | Java | 9,006 | 279 | /*-
* #%L
* Fiji distribution of ImageJ for the life sciences.
* %%
* Copyright (C) 2010 - 2026 Fiji developers.
* %%
* This program is free software: you can redistribute it and/or modify
* it under the terms of the GNU General Public License as
* published by the Free Software Foundation, either version 3 of ... |
38aaa823e3e2455734cd8cff9975578d258b69a11a4be2708753aaee9de8d01d | Java | 9,008 | 253 | ///////////////////////////////////////////////////////////////////////////////
// For information as to what this class does, see the Javadoc, below. //
// //
// Copyright (C) 2026 by Joseph Ramsey, Peter Spirtes, Clark Glymour, //
... |
c19a871e46befd77d344520da61773d4797d261ab6ebd5f77b56be9c3b09c2b9 | Java | 9,024 | 301 | ///////////////////////////////////////////////////////////////////////////////
// For information as to what this class does, see the Javadoc, below. //
// //
// Copyright (C) 2025 by Joseph Ramsey, Peter Spirtes, Clark Glymour, //
... |
df2221e4c886e2531b2088baa92709dece9577c5e732ea208a0abee2bbe33b37 | Java | 9,024 | 189 | ///////////////////////////////////////////////////////////////////////////////
// For information as to what this class does, see the Javadoc, below. //
// //
// Copyright (C) 2026 by Joseph Ramsey, Peter Spirtes, Clark Glymour, //
... |
a270260be13b71f97a663c120741480aa4c3d9379876cb0192b72b023543a030 | Java | 9,051 | 219 | /*-
* #%L
* Fiji distribution of ImageJ for the life sciences.
* %%
* Copyright (C) 2010 - 2026 Fiji developers.
* %%
* This program is free software: you can redistribute it and/or modify
* it under the terms of the GNU General Public License as
* published by the Free Software Foundation, either version 3 of ... |
80edb98bdf7d786b43c223fdb5c4060bdc2629dd695d8c7e9b05e4e6bbe05bdb | Java | 9,069 | 272 | /// ////////////////////////////////////////////////////////////////////////////
// For information as to what this class does, see the Javadoc, below. //
// //
// Copyright (C) 2025 by Joseph Ramsey, Peter Spirtes, Clark Glymour, //... |
d26918b9b8de87a0fc5f96bcb88e7217ab7bc6952f6d13c241dce7be7b231343 | Java | 9,069 | 291 | /*-
* #%L
* Fiji distribution of ImageJ for the life sciences.
* %%
* Copyright (C) 2010 - 2026 Fiji developers.
* %%
* This program is free software: you can redistribute it and/or modify
* it under the terms of the GNU General Public License as
* published by the Free Software Foundation, either version 3 of ... |
a4c8c3d2c1912bfef08c7026ade6cc242081d4afb228f94e4913d85380640503 | Java | 9,074 | 245 | ///////////////////////////////////////////////////////////////////////////////
// For information as to what this class does, see the Javadoc, below. //
// //
// Copyright (C) 2025 by Joseph Ramsey, Peter Spirtes, Clark Glymour, //
... |
cecd4335954218a1db923ac33a1272ea0565d6bdce35007fa2945ba9b52813f8 | Java | 9,076 | 208 | /*-
* #%L
* Fiji distribution of ImageJ for the life sciences.
* %%
* Copyright (C) 2010 - 2026 Fiji developers.
* %%
* This program is free software: you can redistribute it and/or modify
* it under the terms of the GNU General Public License as
* published by the Free Software Foundation, either version 3 of ... |
6e2dfb9032901e914ec315f048cfc8aff2be54d9f9c404983d654966d58c178d | Java | 9,091 | 182 | ///////////////////////////////////////////////////////////////////////////////
// For information as to what this class does, see the Javadoc, below. //
// //
// Copyright (C) 2026 by Joseph Ramsey, Peter Spirtes, Clark Glymour, //
... |
1df41964174e9b8d4eaba87baa83e42c4f8a19c2eae64065f4f677901bb72914 | Java | 9,101 | 227 | package edu.cmu.tetrad.graph;
import java.util.List;
import java.util.ArrayList;
import java.util.Objects;
/**
* EdgeListGraph subclass that applies an {@link EdgeReplicationPolicy} whenever edges are added/removed or endpoints
* are oriented.
* <p>
* Only the mutating operations are overridden; everything else u... |
254e23246ee2f26c63fcd3bac937142e169a833c49cd9fd41499885836985e62 | Java | 9,111 | 242 | ///////////////////////////////////////////////////////////////////////////////
// For information as to what this class does, see the Javadoc, below. //
// //
// Copyright (C) 2025 by Joseph Ramsey, Peter Spirtes, Clark Glymour, //
... |
dbce68090774ff1b0228665a0708119d5c6b584787fd4124b59329d5693adca1 | Java | 9,114 | 222 | ///////////////////////////////////////////////////////////////////////////////
// For information as to what this class does, see the Javadoc, below. //
// //
// Copyright (C) 2025 by Joseph Ramsey, Peter Spirtes, Clark Glymour, //
... |
bbc62c7aee010e99160c0efa8b2ea1442cec0c278a7c9b30094181f5a79b69c9 | Java | 9,129 | 262 | ///////////////////////////////////////////////////////////////////////////////
// For information as to what this class does, see the Javadoc, below. //
// //
// Copyright (C) 2025 by Joseph Ramsey, Peter Spirtes, Clark Glymour, //
... |
77265e241dfb168b17760d243fea068e9cafd33bcde3f328886eacaf8b14d44e | Java | 9,136 | 214 | ///////////////////////////////////////////////////////////////////////////////
// For information as to what this class does, see the Javadoc, below. //
// //
// Copyright (C) 2025 by Joseph Ramsey, Peter Spirtes, Clark Glymour, //
... |
164bbfc4ac04dacc34f71e1d3b4d22d16bc7518357ae9f38e97cf4d450d63a94 | Java | 9,152 | 211 | ///////////////////////////////////////////////////////////////////////////////
// GuidedWitnessHarness.java //
// //
// Oracle head-to-head for FCIT-SL candidate generators: //
... |
207ff20122d955f787a684ec5799cbc32c53aa72973d301c1f52008b2e29957a | Java | 9,157 | 217 | /// ////////////////////////////////////////////////////////////////////////////
// For information as to what this class does, see the Javadoc, below. //
// //
// Copyright (C) 2025 by Joseph Ramsey, Peter Spirtes, Clark Glymour, //... |
049940d27954de8f04ee47a3309bee633150cbf40dc4149e8ef4aa17da1643a4 | Java | 9,185 | 269 | ///////////////////////////////////////////////////////////////////////////////
// For information as to what this class does, see the Javadoc, below. //
// //
// Copyright (C) 2025 by Joseph Ramsey, Peter Spirtes, Clark Glymour, //
... |
8bd7799f758db501898c6e3054530a912c7944fb6515d88f5c8f827318e24167 | Java | 9,225 | 321 | ///////////////////////////////////////////////////////////////////////////////
// For information as to what this class does, see the Javadoc, below. //
// //
// Copyright (C) 2025 by Joseph Ramsey, Peter Spirtes, Clark Glymour, //
... |
92d95afaeb119ed58f684012521b7543a86d51413ce9a51f0e24d9e8134c8b87 | Java | 9,236 | 257 | ///////////////////////////////////////////////////////////////////////////////
// For information as to what this class does, see the Javadoc, below. //
// //
// Copyright (C) 2025 by Joseph Ramsey, Peter Spirtes, Clark Glymour, //
... |
94158f63d04b4f5b1b05575549fc8e69d4ab39338138d447dbf168b058884e85 | Java | 9,238 | 231 | /*-
* #%L
* Fiji distribution of ImageJ for the life sciences.
* %%
* Copyright (C) 2010 - 2026 Fiji developers.
* %%
* This program is free software: you can redistribute it and/or modify
* it under the terms of the GNU General Public License as
* published by the Free Software Foundation, either version 3 of ... |
549973266c4b682d23a4bf6627169827a208c8f3b1e726b54ad70c9671eda064 | Java | 9,243 | 232 | ///////////////////////////////////////////////////////////////////////////////
// For information as to what this class does, see the Javadoc, below. //
// //
// Copyright (C) 2025 by Joseph Ramsey, Peter Spirtes, Clark Glymour, //
... |
b3e2f72651405e19519ac27c7b5a78787e2e81d061877240f9304e624b3850f2 | Java | 9,250 | 262 | ///////////////////////////////////////////////////////////////////////////////
// For information as to what this class does, see the Javadoc, below. //
// //
// Copyright (C) 2025 by Joseph Ramsey, Peter Spirtes, Clark Glymour, //
... |
03e7dde39c86b426219d5ff78210161773f79b078e3ea82496627cd7a9540665 | Java | 9,299 | 209 | /// ////////////////////////////////////////////////////////////////////////////
// For information as to what this class does, see the Javadoc, below. //
// //
// Copyright (C) 2025 by Joseph Ramsey, Peter Spirtes, Clark Glymour, //... |
7ab7a7e5cca7e74630d849d34f568ce374338ea54e2515eb86dfdc636697c411 | Java | 9,307 | 303 | /*-
* #%L
* Fiji distribution of ImageJ for the life sciences.
* %%
* Copyright (C) 2010 - 2026 Fiji developers.
* %%
* This program is free software: you can redistribute it and/or modify
* it under the terms of the GNU General Public License as
* published by the Free Software Foundation, either version 3 of ... |
482bdc7dc07afd85c03b47fa9cee53a78a7ed307fff8c3662d3a349bf93808e4 | Java | 9,328 | 242 | ///////////////////////////////////////////////////////////////////////////////
// For information as to what this class does, see the Javadoc, below. //
// //
// Copyright (C) 2025 by Joseph Ramsey, Peter Spirtes, Clark Glymour, //
... |
095dd0276af57109f567b13eb8a18db216a787f1a31bcdd31dbccf6b7b573d32 | Java | 9,333 | 262 | ///////////////////////////////////////////////////////////////////////////////
// For information as to what this class does, see the Javadoc, below. //
// //
// Copyright (C) 2025 by Joseph Ramsey, Peter Spirtes, Clark Glymour, //
... |
45ff40415f41253294198e0a70f1a0447d3fea4e62270eb9a22c51f3f673c4d7 | Java | 9,338 | 255 | ///////////////////////////////////////////////////////////////////////////////
// For information as to what this class does, see the Javadoc, below. //
// //
// Copyright (C) 2025 by Joseph Ramsey, Peter Spirtes, Clark Glymour, //
... |
e48c454360c1a89dd7d5f016d1dcac5a4a59e796c7b4a9788a8bf8d89c0afea0 | Java | 9,340 | 240 | /*-
* #%L
* Fiji distribution of ImageJ for the life sciences.
* %%
* Copyright (C) 2010 - 2026 Fiji developers.
* %%
* This program is free software: you can redistribute it and/or modify
* it under the terms of the GNU General Public License as
* published by the Free Software Foundation, either version 3 of ... |
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