instruction stringlengths 225 2.35k | input stringlengths 89 1.5k | response stringclasses 698 values |
|---|---|---|
<Instruct>: Given the context 'Potato mitochondria were prepared from 2 kg of tubers in batches of 200 g with 200 ml of a homogenization buffer containing 0.4 M mannitol, 25 mM MOPS (pH 7.8), 1 mM EGTA, 8 mM cysteine and 1 mg/ml fatty acid-free BSA.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [potato]
<Options>: A: tuberaria
B: solanum ipomoeoides
C: solanum annuum
D: solanum nutans
E: None of the above. | [E] |
<Instruct>: Given the context 'The supernatant was centrifuged in a Sorvall SS-34 rotor at 15 000 g for 10 min, the pellet was resuspended in 12 ml of homogenization buffer and mitochondria were purified by centrifugation on a sucrose gradient essentially as described for wheat embryo mitochondria (14).
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [wheat]
<Options>: A: english wheat (aka triticum turgidum)
B: triticum vulgare (aka triticum aestivum)
C: one-grained wheat (aka triticum monococcum)
D: durum wheat (aka triticum turgidum subsp. durum)
E: triticum
F: None of the above. | [B] |
<Instruct>: Given the context 'Electroporation
Electrotransfer experiments were carried out with 1 mg of purified wheat embryo or potato tuber mitochondria in 50 µl of 0.33 M sucrose and 1 µg of recombinant plasmid as described (14).', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [wheat; potato]
<Options>: A: solanum ipomoeoides
B: wild emmer wheat (aka triticum dicoccoides)
C: triticum
D: solanum crispum (chilean potato-tree) (aka solanum crispum)
E: solanum rugosum
F: solanum insanum (solanum melongena var. insanum) (aka solanum insanum)
G: wheat (aka triticum aestivum)
H: potatoes (aka solanum tuberosum)
I: triticum strictum (aka secale strictum)
J: triticum tauschii (aka aegilops tauschii)
K: None of the above. | [G; H] |
<Instruct>: Given the context 'Electroporation
Electrotransfer experiments were carried out with 1 mg of purified wheat embryo or potato tuber mitochondria in 50 µl of 0.33 M sucrose and 1 µg of recombinant plasmid as described (14).', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [wheat; potato]
<Options>: A: triticum strictum (aka secale strictum)
B: english wheat (aka triticum turgidum)
C: air-potato (aka dioscorea bulbifera)
D: triticum aegilops (aka aegilops tauschii)
E: potatoes (aka solanum tuberosum)
F: wild emmer wheat (aka triticum dicoccoides)
G: solanum ipomoeoides
H: solanum annuum
I: solanum rugosum
J: wheat (aka triticum aestivum)
K: None of the above. | [J; E] |
<Instruct>: Given the context 'In the case of potato mitochondria the incubation mixture was supplemented with 1 mg/ml of fatty acid-free BSA.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [potato]
<Options>: A: sweet potato (aka ipomoea batatas)
B: solanum tuberosum (solanum aracc-papa) (aka solanum tuberosum)
C: solanum nutans
D: tuberaria
E: dioscorea bulbifera (potato yam) (aka dioscorea bulbifera)
F: None of the above. | [B] |
<Instruct>: Given the context 'One microliter of 20% SDS was added to achieve mitochondrial lysis and the DNA was extracted with phenol/chloroform, precipitated with 0.1 vol of 3 M Sodium Acetate (pH 5.2), 3 vol of 100% ethanol and 100 ng of carrier yeast tRNA and left overnight at −20°C.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [yeast]
<Options>: A: saccharomyces lactis (aka kluyveromyces lactis)
B: saccharomyces sp.
C: saccharomyces hansenii (aka debaryomyces hansenii)
D: brewer's yeast (aka saccharomyces cerevisiae)
E: saccharomycotina (budding yeasts & others) (aka saccharomycotina)
F: None of the above. | [D] |
<Instruct>: Given the context 'DNA sequencing
Sequence analyses were performed directly on the RT–PCR product using an automatic DNA sequencing equipment with the BigDye® Terminator Cycle Sequencing Kit (Applied Biosystem).
RESULTS
S.tuberosum rps10 transcripts are not processed in wheat mitochondria
The S.tuberosum rps10 construct under control of a wheat cox2 promoter (Figure 1A) was incorporated into purified wheat mitochondria by electroporation as indicated in Materials and Methods.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [s.tuberosum; wheat]
<Options>: A: triticum aethiopicum (aka triticum turgidum)
B: solanum mammosum
C: triticum aegilops (aka aegilops tauschii)
D: potato (aka solanum tuberosum)
E: triticum vulgare (aka triticum aestivum)
F: solanum insanum (solanum melongena var. insanum) (aka solanum insanum)
G: triticum
H: triticum strictum (aka secale strictum)
I: solanum barbisetum
J: solanum pallidum
K: None of the above. | [D; E] |
<Instruct>: Given the context 'DNA sequencing
Sequence analyses were performed directly on the RT–PCR product using an automatic DNA sequencing equipment with the BigDye® Terminator Cycle Sequencing Kit (Applied Biosystem).
RESULTS
S.tuberosum rps10 transcripts are not processed in wheat mitochondria
The S.tuberosum rps10 construct under control of a wheat cox2 promoter (Figure 1A) was incorporated into purified wheat mitochondria by electroporation as indicated in Materials and Methods.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [s.tuberosum; wheat]
<Options>: A: solanum paludosum
B: solanum lanceaefolium (aka solanum lanceifolium)
C: triticum
D: triticum tauschii (aka aegilops tauschii)
E: triticum aestivum (triticum aestivum subsp. aestivum) (aka triticum aestivum)
F: potatoes (aka solanum tuberosum)
G: wild emmer wheat (aka triticum dicoccoides)
H: solanum vicinum
I: solanum trifolium
J: one-grained wheat (aka triticum monococcum)
K: None of the above. | [F; E] |
<Instruct>: Given the context 'DNA sequencing
Sequence analyses were performed directly on the RT–PCR product using an automatic DNA sequencing equipment with the BigDye® Terminator Cycle Sequencing Kit (Applied Biosystem).
RESULTS
S.tuberosum rps10 transcripts are not processed in wheat mitochondria
The S.tuberosum rps10 construct under control of a wheat cox2 promoter (Figure 1A) was incorporated into purified wheat mitochondria by electroporation as indicated in Materials and Methods.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [wheat]
<Options>: A: bread wheat (aka triticum aestivum)
B: durum wheat (aka triticum turgidum subsp. durum)
C: one-grained wheat (aka triticum monococcum)
D: triticum
E: triticum strictum (aka secale strictum)
F: None of the above. | [A] |
<Instruct>: Given the context 'The primers used allowed detection of the transcripts generated by the constructs introduced and excluded any product from endogenous cox2 (or rps10 in the potato system).', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [potato]
<Options>: A: solanum insanum (solanum melongena var. insanum) (aka solanum insanum)
B: chaco potato (aka solanum chacoense)
C: tuberaria
D: air-potato (aka dioscorea bulbifera)
E: solanum tuberosum (solanum aracc-papa) (aka solanum tuberosum)
F: None of the above. | [E] |
<Instruct>: Given the context 'Previously, five C residues, two in exon 1, one in the intron and two in exon 2 have been reported to be changed to U by editing in potato mitochondria (23).', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [potato]
<Options>: A: solanum insanum (solanum melongena var. insanum) (aka solanum insanum)
B: tuberaria
C: potatoes (aka solanum tuberosum)
D: chinese-potato (aka dioscorea polystachya)
E: solanum glutinosum
F: None of the above. | [C] |
<Instruct>: Given the context 'To determine if the non-cognate transcript could be recognized by the wheat RNA editing machinery, the 1204 bp RT–PCR product was sequenced.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [wheat]
<Options>: A: triticum aestivum subsp. aestivum (aka triticum aestivum)
B: one-grained wheat (aka triticum monococcum)
C: english wheat (aka triticum turgidum)
D: wild emmer wheat (aka triticum dicoccoides)
E: durum wheat (aka triticum turgidum subsp. durum)
F: None of the above. | [A] |
<Instruct>: Given the context 'While wheat cox2 editing sites were correctly edited in control as expected (Figure 1C, only site C77 is shown), all five editable residues in potato rps10 transcript remain unchanged.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [wheat; potato]
<Options>: A: potato yam (aka dioscorea bulbifera)
B: triticum tauschii (aka aegilops tauschii)
C: triticum aestivum subsp. aestivum (aka triticum aestivum)
D: triticum strictum (aka secale strictum)
E: solanum rugosum
F: potatoes (aka solanum tuberosum)
G: solanum
H: wild emmer wheat (aka triticum dicoccoides)
I: one-grained wheat (aka triticum monococcum)
J: solanum nutans
K: None of the above. | [C; F] |
<Instruct>: Given the context 'While wheat cox2 editing sites were correctly edited in control as expected (Figure 1C, only site C77 is shown), all five editable residues in potato rps10 transcript remain unchanged.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [wheat; potato]
<Options>: A: one-grained wheat (aka triticum monococcum)
B: triticum tauschii (aka aegilops tauschii)
C: sweet potato (aka ipomoea batatas)
D: potato (aka solanum tuberosum)
E: chaco potato (aka solanum chacoense)
F: solanum glutinosum
G: triticum x secale (aka x triticosecale)
H: triticum sativum (aka triticum aestivum)
I: dioscorea bulbifera (potato yam) (aka dioscorea bulbifera)
J: english wheat (aka triticum turgidum)
K: None of the above. | [H; D] |
<Instruct>: Given the context 'cox2 C77 editing sites are identical in potato and wheat.
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [potato; wheat]
<Options>: A: triticum aethiopicum (aka triticum turgidum)
B: chaco potato (aka solanum chacoense)
C: wild emmer wheat (aka triticum dicoccoides)
D: tuberaria
E: triticum
F: potatoes (aka solanum tuberosum)
G: solanum nutans
H: wheat (aka triticum aestivum)
I: solanum insanum (solanum melongena var. insanum) (aka solanum insanum)
J: triticum x secale (aka x triticosecale)
K: None of the above. | [F; H] |
<Instruct>: Given the context 'cox2 C77 editing sites are identical in potato and wheat.
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [potato; wheat]
<Options>: A: common wheat (aka triticum aestivum)
B: solanum insanum (solanum melongena var. insanum) (aka solanum insanum)
C: wild emmer wheat (aka triticum dicoccoides)
D: solanum rugosum
E: chinese-potato (aka dioscorea polystachya)
F: one-grained wheat (aka triticum monococcum)
G: potato (aka solanum tuberosum)
H: solanum crispum (chilean potato-tree) (aka solanum crispum)
I: triticum x secale (aka x triticosecale)
J: triticum
K: None of the above. | [G; A] |
<Instruct>: Given the context 'Failure of rps10 transcript splicing in wheat mitochondria is not linked to the absence of editing
It has been suggested that residues C2 and C3 participate in the secondary structure of the intron necessary for splicing (23).', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [wheat]
<Options>: A: triticum durum (aka triticum turgidum subsp. durum)
B: triticum aestivum subsp. aestivum (aka triticum aestivum)
C: triticum
D: wild emmer wheat (aka triticum dicoccoides)
E: one-grained wheat (aka triticum monococcum)
F: None of the above. | [B] |
<Instruct>: Given the context 'Electroporation of S.tuberosum mitochondria
Since two important post-transcriptional processes, RNA editing and splicing, were inoperative when S.tuberosum rps10 was expressed in wheat mitochondria, we decided to verify whether the negative results were inherent to the rps10 chimeric constructs or due to the lack of trans-recognition elements in wheat mitochondria.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [s.tuberosum; wheat]
<Options>: A: rivet wheat (aka triticum turgidum)
B: solanum pallidum
C: triticum strictum (aka secale strictum)
D: potato (aka solanum tuberosum)
E: solanum lanceaefolium (aka solanum lanceifolium)
F: triticum tauschii (aka aegilops tauschii)
G: durum wheat (aka triticum turgidum subsp. durum)
H: common wheat (aka triticum aestivum)
I: solanum mammosum
J: solanum barbisetum
K: None of the above. | [D; H] |
<Instruct>: Given the context 'Electroporation of S.tuberosum mitochondria
Since two important post-transcriptional processes, RNA editing and splicing, were inoperative when S.tuberosum rps10 was expressed in wheat mitochondria, we decided to verify whether the negative results were inherent to the rps10 chimeric constructs or due to the lack of trans-recognition elements in wheat mitochondria.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [s.tuberosum; wheat]
<Options>: A: triticum
B: solanum hirtum
C: triticum x secale (aka x triticosecale)
D: solanum ruvu
E: potato (aka solanum tuberosum)
F: solanum succosum
G: triticum aegilops (aka aegilops tauschii)
H: solanum glutinosum
I: triticum durum (aka triticum turgidum subsp. durum)
J: triticum aestivum (triticum aestivum subsp. aestivum) (aka triticum aestivum)
K: None of the above. | [E; J] |
<Instruct>: Given the context 'For this purpose, it was necessary to set up an electroporation protocol adapted to S.tuberosum mitochondria.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [s.tuberosum]
<Options>: A: solanum tuberosum var. boreale (aka solanum stoloniferum)
B: potato (aka solanum tuberosum)
C: solanum esculentum (aka solanum lycopersicum)
D: solanum insanum (solanum melongena var. insanum) (aka solanum insanum)
E: solanum florulentum
F: None of the above. | [B] |
<Instruct>: Given the context 'Purified organelles were prepared from potato tubers as indicated in Materials and Methods.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [potato]
<Options>: A: potatoes (aka solanum tuberosum)
B: solanum glutinosum
C: chilean potato-tree (aka solanum crispum)
D: chaco potato (aka solanum chacoense)
E: chinese-potato (aka dioscorea polystachya)
F: None of the above. | [A] |
<Instruct>: Given the context 'Purified organelles were prepared from potato tubers as indicated in Materials and Methods.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [potato]
<Options>: A: solanum glutinosum
B: chaco potato (aka solanum chacoense)
C: chinese-potato (aka dioscorea polystachya)
D: chilean potato-tree (aka solanum crispum)
E: None of the above. | [E] |
<Instruct>: Given the context 'Potato mitochondria show a broad range response with a maximum around 13 kV (Figure 3).', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [potato]
<Options>: A: solanum
B: chaco potato (aka solanum chacoense)
C: solanum rugosum
D: potatoes (aka solanum tuberosum)
E: solanum nutans
F: None of the above. | [D] |
<Instruct>: Given the context 'This voltage setting was therefore used for further experiments.
S.tuberosum mitochondria does not recognize the wheat cox2 promoter
To ascertain the ability of electroporated mitochondria to perform expression of the exogenous gene construct, we used a plasmid containing the potato cox2 gene controlled either by T.aestivum or S.tuberosum promoters.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [s.tuberosum; wheat; potato; t.aestivum]
<Options>: A: triticum aestivum subsp. tibeticum (tibetan wheat) (aka triticum aestivum subsp. tibeticum)
B: solanum ipomoeoides
C: solanum trifolium
D: tuberosum group
E: triticum aestivum (triticum aestivum subsp. aestivum) (aka triticum aestivum)
F: triticum vulgare var. miltura (aka triticum aestivum var. milturum)
G: tuberaria
H: wild emmer wheat (aka triticum dicoccoides)
I: triticum durum (aka triticum turgidum subsp. durum)
J: solanum insanum (solanum melongena var. insanum) (aka solanum insanum)
K: solanum pallidum
L: chinese-potato (aka dioscorea polystachya)
M: solanum nutans
N: potato (aka solanum tuberosum)
O: triticum x secale (aka x triticosecale)
P: english wheat (aka triticum turgidum)
Q: triticum
R: None of the above. | [N; E; N; E] |
<Instruct>: Given the context 'This voltage setting was therefore used for further experiments.
S.tuberosum mitochondria does not recognize the wheat cox2 promoter
To ascertain the ability of electroporated mitochondria to perform expression of the exogenous gene construct, we used a plasmid containing the potato cox2 gene controlled either by T.aestivum or S.tuberosum promoters.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [s.tuberosum; wheat; potato; t.aestivum]
<Options>: A: bread wheat (aka triticum aestivum)
B: solanum glabratum
C: tuberaria
D: one-grained wheat (aka triticum monococcum)
E: triticum tauschii (aka aegilops tauschii)
F: solanum luteum (aka solanum villosum)
G: triticum aestivum var. aureum
H: triticum x secale (aka x triticosecale)
I: triticum
J: triticum spelta var. album
K: solanum rugosum
L: triticum durum (aka triticum turgidum subsp. durum)
M: solanum esculentum (aka solanum lycopersicum)
N: solanum glutinosum
O: solanum insanum (solanum melongena var. insanum) (aka solanum insanum)
P: potatoes (aka solanum tuberosum)
Q: solanum ipomoeoides
R: None of the above. | [P; A; P; A] |
<Instruct>: Given the context 'This voltage setting was therefore used for further experiments.
S.tuberosum mitochondria does not recognize the wheat cox2 promoter
To ascertain the ability of electroporated mitochondria to perform expression of the exogenous gene construct, we used a plasmid containing the potato cox2 gene controlled either by T.aestivum or S.tuberosum promoters.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [s.tuberosum; wheat; potato; t.aestivum]
<Options>: A: triticum turanicum (aka triticum turgidum subsp. turanicum)
B: triticum
C: solanum insanum (solanum melongena var. insanum) (aka solanum insanum)
D: solanum luteum (aka solanum villosum)
E: solanum paludosum
F: triticum spelta var. album
G: triticum vulgare (aka triticum aestivum)
H: one-grained wheat (aka triticum monococcum)
I: solanum crispum (chilean potato-tree) (aka solanum crispum)
J: triticum aestivum var. aureum
K: potato (aka solanum tuberosum)
L: solanum ipomoeoides
M: solanum nutans
N: tuberaria
O: solanum pallidum
P: triticum x secale (aka x triticosecale)
Q: triticum aestivum subsp. tibeticum (tibetan wheat) (aka triticum aestivum subsp. tibeticum)
R: triticum aegilops (aka aegilops tauschii)
S: None of the above. | [K; G; K; G] |
<Instruct>: Given the context 'This voltage setting was therefore used for further experiments.
S.tuberosum mitochondria does not recognize the wheat cox2 promoter
To ascertain the ability of electroporated mitochondria to perform expression of the exogenous gene construct, we used a plasmid containing the potato cox2 gene controlled either by T.aestivum or S.tuberosum promoters.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [s.tuberosum; wheat; potato; t.aestivum]
<Options>: A: solanum vicinum
B: triticum aethiopicum (aka triticum turgidum)
C: solanum insanum (solanum melongena var. insanum) (aka solanum insanum)
D: triticum durum (aka triticum turgidum subsp. durum)
E: triticum aestivum x secale anatolicum
F: triticum aestivum var. aureum
G: triticum x secale (aka x triticosecale)
H: wild emmer wheat (aka triticum dicoccoides)
I: solanum luteum (aka solanum villosum)
J: potatoes (aka solanum tuberosum)
K: solanum florulentum
L: wheat (aka triticum aestivum)
M: solanum glabratum
N: triticum strictum (aka secale strictum)
O: solanum ipomoeoides
P: sweet potato (aka ipomoea batatas)
Q: solanum annuum
R: None of the above. | [J; L; J; L] |
<Instruct>: Given the context 'This voltage setting was therefore used for further experiments.
S.tuberosum mitochondria does not recognize the wheat cox2 promoter
To ascertain the ability of electroporated mitochondria to perform expression of the exogenous gene construct, we used a plasmid containing the potato cox2 gene controlled either by T.aestivum or S.tuberosum promoters.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [s.tuberosum]
<Options>: A: solanum barbisetum
B: solanum tuberosum var. boreale (aka solanum stoloniferum)
C: solanum luteum (aka solanum villosum)
D: potatoes (aka solanum tuberosum)
E: solanum esculentum (aka solanum lycopersicum)
F: None of the above. | [D] |
<Instruct>: Given the context 'As shown in Figure 4, the construct containing the wheat or potato promoters was transcribed only in cognate mitochondria.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [wheat; potato]
<Options>: A: solanum
B: wild emmer wheat (aka triticum dicoccoides)
C: triticum x secale (aka x triticosecale)
D: solanum annuum
E: triticum aestivum subsp. aestivum (aka triticum aestivum)
F: solanum nutans
G: potato (aka solanum tuberosum)
H: one-grained wheat (aka triticum monococcum)
I: chaco potato (aka solanum chacoense)
J: triticum strictum (aka secale strictum)
K: None of the above. | [E; G] |
<Instruct>: Given the context 'As shown in Figure 4, the construct containing the wheat or potato promoters was transcribed only in cognate mitochondria.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [wheat; potato]
<Options>: A: solanum nutans
B: wild emmer wheat (aka triticum dicoccoides)
C: triticum strictum (aka secale strictum)
D: triticum x secale (aka x triticosecale)
E: one-grained wheat (aka triticum monococcum)
F: solanum annuum
G: solanum
H: triticum aestivum subsp. aestivum (aka triticum aestivum)
I: chaco potato (aka solanum chacoense)
J: None of the above. | [H; J] |
<Instruct>: Given the context 'As shown in Figure 4, the construct containing the wheat or potato promoters was transcribed only in cognate mitochondria.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [wheat; potato]
<Options>: A: triticum strictum (aka secale strictum)
B: triticum x secale (aka x triticosecale)
C: bread wheat (aka triticum aestivum)
D: one-grained wheat (aka triticum monococcum)
E: chaco potato (aka solanum chacoense)
F: sweet potato (aka ipomoea batatas)
G: potato (aka solanum tuberosum)
H: potato yam (aka dioscorea bulbifera)
I: chilean potato-tree (aka solanum crispum)
J: durum wheat (aka triticum turgidum subsp. durum)
K: None of the above. | [C; G] |
<Instruct>: Given the context 'In potato, the mature product is barely detectable.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [potato]
<Options>: A: solanum insanum (solanum melongena var. insanum) (aka solanum insanum)
B: potatoes (aka solanum tuberosum)
C: tuberaria
D: solanum rugosum
E: solanum ipomoeoides
F: None of the above. | [B] |
<Instruct>: Given the context 'In contrast to wheat mitochondria, the 821 nt mature transcript was only detected when the electroporated potato mitochondria were incubated in the presence of fatty acid-free BSA.
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [wheat; potato]
<Options>: A: solanum glutinosum
B: rivet wheat (aka triticum turgidum)
C: potato (aka solanum tuberosum)
D: one-grained wheat (aka triticum monococcum)
E: triticum aestivum (triticum aestivum subsp. aestivum) (aka triticum aestivum)
F: chinese-potato (aka dioscorea polystachya)
G: chaco potato (aka solanum chacoense)
H: solanum ipomoeoides
I: triticum strictum (aka secale strictum)
J: triticum
K: None of the above. | [E; C] |
<Instruct>: Given the context 'In contrast to wheat mitochondria, the 821 nt mature transcript was only detected when the electroporated potato mitochondria were incubated in the presence of fatty acid-free BSA.
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [wheat; potato]
<Options>: A: solanum rugosum
B: triticum strictum (aka secale strictum)
C: triticum aegilops (aka aegilops tauschii)
D: potato (aka solanum tuberosum)
E: solanum giganteum
F: bread wheat (aka triticum aestivum)
G: solanum annuum
H: one-grained wheat (aka triticum monococcum)
I: triticum
J: chinese-potato (aka dioscorea polystachya)
K: None of the above. | [F; D] |
<Instruct>: Given the context 'A cognate rps10 construct is correctly expressed, edited and processed in potato mitochondria
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [potato]
<Options>: A: solanum insanum (solanum melongena var. insanum) (aka solanum insanum)
B: chaco potato (aka solanum chacoense)
C: potatoes (aka solanum tuberosum)
D: solanum glutinosum
E: air-potato (aka dioscorea bulbifera)
F: None of the above. | [C] |
<Instruct>: Given the context 'The construct expressing potato rps10 under the control of potato cox2 promoter was introduced into S.tuberosum isolated mitochondria.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [potato; s.tuberosum]
<Options>: A: tuberaria
B: solanum insanum (solanum melongena var. insanum) (aka solanum insanum)
C: potato (aka solanum tuberosum)
D: solanum mammosum
E: solanum giganteum
F: solanum ruvu
G: solanum esculentum (aka solanum lycopersicum)
H: solanum pallidum
I: chaco potato (aka solanum chacoense)
J: None of the above. | [C; C] |
<Instruct>: Given the context 'The construct expressing potato rps10 under the control of potato cox2 promoter was introduced into S.tuberosum isolated mitochondria.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [potato; s.tuberosum]
<Options>: A: solanum ruvu
B: tuberaria
C: solanum esculentum (aka solanum lycopersicum)
D: chaco potato (aka solanum chacoense)
E: solanum mammosum
F: solanum pallidum
G: solanum giganteum
H: solanum insanum (solanum melongena var. insanum) (aka solanum insanum)
I: None of the above. | [I; I] |
<Instruct>: Given the context 'The construct expressing potato rps10 under the control of potato cox2 promoter was introduced into S.tuberosum isolated mitochondria.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [potato; s.tuberosum]
<Options>: A: solanum giganteum
B: solanum insanum (solanum melongena var. insanum) (aka solanum insanum)
C: solanum tuberosum (solanum aracc-papa) (aka solanum tuberosum)
D: solanum ipomoeoides
E: chinese-potato (aka dioscorea polystachya)
F: solanum paludosum
G: air-potato (aka dioscorea bulbifera)
H: solanum glabratum
I: solanum florulentum
J: None of the above. | [C; C] |
<Instruct>: Given the context 'A cognate editing site in a non-native context is not recognized by wheat mitochondria but is recognized in heterologous mitochondria
To test whether wheat mitochondria are able to edit a cognate site when placed in the context of a potato transcript, we introduced the C259 −16/+6 region from wheat cox2 into potato rps10 exon 1 or intron (Figure 6A, construct MA and ME6, respectively).', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [wheat; potato]
<Options>: A: rivet wheat (aka triticum turgidum)
B: potatoes (aka solanum tuberosum)
C: wild emmer wheat (aka triticum dicoccoides)
D: chaco potato (aka solanum chacoense)
E: triticum x secale (aka x triticosecale)
F: sweet potato (aka ipomoea batatas)
G: triticum aestivum (triticum aestivum subsp. aestivum) (aka triticum aestivum)
H: solanum giganteum
I: triticum tauschii (aka aegilops tauschii)
J: potato yam (aka dioscorea bulbifera)
K: None of the above. | [G; B] |
<Instruct>: Given the context 'A cognate editing site in a non-native context is not recognized by wheat mitochondria but is recognized in heterologous mitochondria
To test whether wheat mitochondria are able to edit a cognate site when placed in the context of a potato transcript, we introduced the C259 −16/+6 region from wheat cox2 into potato rps10 exon 1 or intron (Figure 6A, construct MA and ME6, respectively).', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [wheat; potato]
<Options>: A: rivet wheat (aka triticum turgidum)
B: triticum aegilops (aka aegilops tauschii)
C: solanum nutans
D: triticum
E: solanum ipomoeoides
F: solanum annuum
G: triticum aestivum (triticum aestivum subsp. aestivum) (aka triticum aestivum)
H: wild emmer wheat (aka triticum dicoccoides)
I: solanum tuberosum (solanum aracc-papa) (aka solanum tuberosum)
J: solanum insanum (solanum melongena var. insanum) (aka solanum insanum)
K: None of the above. | [G; I] |
<Instruct>: Given the context 'A cognate editing site in a non-native context is not recognized by wheat mitochondria but is recognized in heterologous mitochondria
To test whether wheat mitochondria are able to edit a cognate site when placed in the context of a potato transcript, we introduced the C259 −16/+6 region from wheat cox2 into potato rps10 exon 1 or intron (Figure 6A, construct MA and ME6, respectively).', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [potato]
<Options>: A: solanum crispum (chilean potato-tree) (aka solanum crispum)
B: solanum nutans
C: potato (aka solanum tuberosum)
D: solanum giganteum
E: solanum annuum
F: None of the above. | [C] |
<Instruct>: Given the context 'As reported previously, the 23 nt region forming the C259 editing site from wheat cox2 was efficiently edited when grafted into a different context in a wheat transcript (17).', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [wheat]
<Options>: A: rivet wheat (aka triticum turgidum)
B: wheat (aka triticum aestivum)
C: wild emmer wheat (aka triticum dicoccoides)
D: triticum strictum (aka secale strictum)
E: triticum
F: None of the above. | [B] |
<Instruct>: Given the context 'Wild-type rps10 (pRPS10W) and the MA and ME6 mutants were expressed in wheat mitochondria but no splicing was observed (Figure 6B).', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [wheat]
<Options>: A: triticum
B: english wheat (aka triticum turgidum)
C: triticum aestivum (triticum aestivum subsp. aestivum) (aka triticum aestivum)
D: triticum x secale (aka x triticosecale)
E: durum wheat (aka triticum turgidum subsp. durum)
F: None of the above. | [C] |
<Instruct>: Given the context 'Unexpectedly, wheat mitochondria appear to be unable to edit the cognate C259 site when the −16/+6 region is located on a potato rps10 precursor.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [wheat; potato]
<Options>: A: wild emmer wheat (aka triticum dicoccoides)
B: triticum strictum (aka secale strictum)
C: solanum ipomoeoides
D: common wheat (aka triticum aestivum)
E: solanum nutans
F: chinese-potato (aka dioscorea polystachya)
G: triticum x secale (aka x triticosecale)
H: solanum insanum (solanum melongena var. insanum) (aka solanum insanum)
I: triticum
J: solanum tuberosum (solanum aracc-papa) (aka solanum tuberosum)
K: None of the above. | [D; J] |
<Instruct>: Given the context 'Unexpectedly, wheat mitochondria appear to be unable to edit the cognate C259 site when the −16/+6 region is located on a potato rps10 precursor.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [wheat; potato]
<Options>: A: triticum tauschii (aka aegilops tauschii)
B: chinese-potato (aka dioscorea polystachya)
C: chaco potato (aka solanum chacoense)
D: potatoes (aka solanum tuberosum)
E: triticum vulgare (aka triticum aestivum)
F: triticum
G: wild emmer wheat (aka triticum dicoccoides)
H: solanum insanum (solanum melongena var. insanum) (aka solanum insanum)
I: solanum nutans
J: one-grained wheat (aka triticum monococcum)
K: None of the above. | [E; D] |
<Instruct>: Given the context 'The analogous MAb and ME6b constructs, containing the S.tuberosum cox2 promoter and the C259 region inserted into rps10 exon 1 and intron were used to electroporate potato mitochondria.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [s.tuberosum; potato]
<Options>: A: solanum annuum
B: solanum insanum (solanum melongena var. insanum) (aka solanum insanum)
C: chaco potato (aka solanum chacoense)
D: solanum trifolium
E: potato (aka solanum tuberosum)
F: tuberosum group
G: solanum ipomoeoides
H: solanum hirtum
I: None of the above. | [E; E] |
<Instruct>: Given the context 'The analogous MAb and ME6b constructs, containing the S.tuberosum cox2 promoter and the C259 region inserted into rps10 exon 1 and intron were used to electroporate potato mitochondria.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [s.tuberosum; potato]
<Options>: A: solanum ruvu
B: potatoes (aka solanum tuberosum)
C: air-potato (aka dioscorea bulbifera)
D: solanum giganteum
E: solanum trifolium
F: solanum insanum (solanum melongena var. insanum) (aka solanum insanum)
G: chinese-potato (aka dioscorea polystachya)
H: chilean potato-tree (aka solanum crispum)
I: solanum glutinosum
J: None of the above. | [B; B] |
<Instruct>: Given the context 'Interestingly, while C259 insertion was not recognized in wheat mitochondria (Figure 6D), the potato RNA editing machinery edited the inserted C259 region (Figure 6E).', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [wheat; potato]
<Options>: A: triticum x secale (aka x triticosecale)
B: triticum tauschii (aka aegilops tauschii)
C: potatoes (aka solanum tuberosum)
D: triticum aethiopicum (aka triticum turgidum)
E: solanum
F: solanum ipomoeoides
G: solanum insanum (solanum melongena var. insanum) (aka solanum insanum)
H: chinese-potato (aka dioscorea polystachya)
I: bread wheat (aka triticum aestivum)
J: triticum strictum (aka secale strictum)
K: None of the above. | [I; C] |
<Instruct>: Given the context 'Interestingly, while C259 insertion was not recognized in wheat mitochondria (Figure 6D), the potato RNA editing machinery edited the inserted C259 region (Figure 6E).', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [wheat; potato]
<Options>: A: solanum
B: triticum
C: wild emmer wheat (aka triticum dicoccoides)
D: triticum strictum (aka secale strictum)
E: solanum nutans
F: solanum tuberosum (solanum aracc-papa) (aka solanum tuberosum)
G: chaco potato (aka solanum chacoense)
H: triticum durum (aka triticum turgidum subsp. durum)
I: triticum aestivum subsp. aestivum (aka triticum aestivum)
J: chilean potato-tree (aka solanum crispum)
K: None of the above. | [I; F] |
<Instruct>: Given the context 'rps10 was chosen precisely because this genetic information is lacking in wheat mitochondria but is active in potato mitochondria (20,23,25).', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [wheat; potato]
<Options>: A: potatoes (aka solanum tuberosum)
B: solanum ipomoeoides
C: solanum nutans
D: one-grained wheat (aka triticum monococcum)
E: triticum strictum (aka secale strictum)
F: solanum annuum
G: triticum
H: triticum aegilops (aka aegilops tauschii)
I: common wheat (aka triticum aestivum)
J: air-potato (aka dioscorea bulbifera)
K: None of the above. | [I; A] |
<Instruct>: Given the context 'rps10 was chosen precisely because this genetic information is lacking in wheat mitochondria but is active in potato mitochondria (20,23,25).', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [wheat; potato]
<Options>: A: solanum crispum (chilean potato-tree) (aka solanum crispum)
B: triticum strictum (aka secale strictum)
C: triticum x secale (aka x triticosecale)
D: triticum vulgare (aka triticum aestivum)
E: triticum
F: solanum tuberosum (solanum aracc-papa) (aka solanum tuberosum)
G: tuberaria
H: solanum rugosum
I: triticum durum (aka triticum turgidum subsp. durum)
J: chaco potato (aka solanum chacoense)
K: None of the above. | [D; F] |
<Instruct>: Given the context 'Moreover, rps10 transcripts undergo five C-to-U editing events in potato mitochondria and rps10 contains an intron, thus facilitating the analysis of post-transcriptional processing.
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [potato]
<Options>: A: solanum insanum (solanum melongena var. insanum) (aka solanum insanum)
B: sweet potato (aka ipomoea batatas)
C: tuberaria
D: solanum tuberosum (solanum aracc-papa) (aka solanum tuberosum)
E: solanum nutans
F: None of the above. | [D] |
<Instruct>: Given the context 'To best evaluate the expression of rps10 in the non-cognate mitochondria, it was necessary to set up electroporation conditions for introducing foreign DNA into S.tuberosum mitochondria.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [s.tuberosum]
<Options>: A: solanum pallidum
B: solanum glutinosum
C: solanum esculentum (aka solanum lycopersicum)
D: solanum succosum
E: potatoes (aka solanum tuberosum)
F: None of the above. | [E] |
<Instruct>: Given the context 'Potato tuber mitochondria were able to incorporate DNA essentially under the same conditions described for wheat embryo organelles (14), except that the optimal voltage range was larger.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [potato; wheat]
<Options>: A: solanum
B: solanum crispum (chilean potato-tree) (aka solanum crispum)
C: triticum x secale (aka x triticosecale)
D: one-grained wheat (aka triticum monococcum)
E: chaco potato (aka solanum chacoense)
F: triticum aegilops (aka aegilops tauschii)
G: sweet potato (aka ipomoea batatas)
H: wheat (aka triticum aestivum)
I: solanum tuberosum (solanum aracc-papa) (aka solanum tuberosum)
J: wild emmer wheat (aka triticum dicoccoides)
K: None of the above. | [I; H] |
<Instruct>: Given the context 'Potato tuber mitochondria were able to incorporate DNA essentially under the same conditions described for wheat embryo organelles (14), except that the optimal voltage range was larger.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [potato; wheat]
<Options>: A: tuberaria
B: triticum aestivum subsp. aestivum (aka triticum aestivum)
C: solanum nutans
D: one-grained wheat (aka triticum monococcum)
E: solanum insanum (solanum melongena var. insanum) (aka solanum insanum)
F: triticum strictum (aka secale strictum)
G: triticum
H: chaco potato (aka solanum chacoense)
I: potatoes (aka solanum tuberosum)
J: durum wheat (aka triticum turgidum subsp. durum)
K: None of the above. | [I; B] |
<Instruct>: Given the context 'A major difference to wheat was that isolated potato mitochondria were viable for 3–4 h as measured by oxygen consumption (data not shown).', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [wheat; potato]
<Options>: A: triticum x secale (aka x triticosecale)
B: triticum aethiopicum (aka triticum turgidum)
C: dioscorea bulbifera (potato yam) (aka dioscorea bulbifera)
D: potatoes (aka solanum tuberosum)
E: wheat (aka triticum aestivum)
F: chinese-potato (aka dioscorea polystachya)
G: wild emmer wheat (aka triticum dicoccoides)
H: solanum glutinosum
I: tuberaria
J: one-grained wheat (aka triticum monococcum)
K: None of the above. | [E; D] |
<Instruct>: Given the context 'A major difference to wheat was that isolated potato mitochondria were viable for 3–4 h as measured by oxygen consumption (data not shown).', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [wheat; potato]
<Options>: A: common wheat (aka triticum aestivum)
B: triticum tauschii (aka aegilops tauschii)
C: tuberaria
D: triticum durum (aka triticum turgidum subsp. durum)
E: air-potato (aka dioscorea bulbifera)
F: potatoes (aka solanum tuberosum)
G: solanum nutans
H: triticum x secale (aka x triticosecale)
I: solanum glutinosum
J: one-grained wheat (aka triticum monococcum)
K: None of the above. | [A; F] |
<Instruct>: Given the context 'This behaviour probably reflects the uncoupling of oxidative phosphorylation by fatty acids during incubation of potato mitochondria (26).', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [potato]
<Options>: A: sweet potato (aka ipomoea batatas)
B: solanum insanum (solanum melongena var. insanum) (aka solanum insanum)
C: chinese-potato (aka dioscorea polystachya)
D: potatoes (aka solanum tuberosum)
E: solanum rugosum
F: None of the above. | [D] |
<Instruct>: Given the context 'An interesting observation was that neither the wheat nor the potato cox2 promoters were recognized in a heterologous context (Figure 4A and B).', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [wheat; potato]
<Options>: A: triticum strictum (aka secale strictum)
B: solanum rugosum
C: potato (aka solanum tuberosum)
D: triticum
E: tuberaria
F: chilean potato-tree (aka solanum crispum)
G: chinese-potato (aka dioscorea polystachya)
H: common wheat (aka triticum aestivum)
I: triticum aegilops (aka aegilops tauschii)
J: triticum durum (aka triticum turgidum subsp. durum)
K: None of the above. | [H; C] |
<Instruct>: Given the context 'An interesting observation was that neither the wheat nor the potato cox2 promoters were recognized in a heterologous context (Figure 4A and B).', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [wheat; potato]
<Options>: A: solanum nutans
B: solanum giganteum
C: triticum
D: english wheat (aka triticum turgidum)
E: one-grained wheat (aka triticum monococcum)
F: solanum tuberosum (solanum aracc-papa) (aka solanum tuberosum)
G: solanum glutinosum
H: triticum aegilops (aka aegilops tauschii)
I: triticum sativum (aka triticum aestivum)
J: solanum crispum (chilean potato-tree) (aka solanum crispum)
K: None of the above. | [I; F] |
<Instruct>: Given the context 'An interesting observation was that neither the wheat nor the potato cox2 promoters were recognized in a heterologous context (Figure 4A and B).', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [wheat; potato]
<Options>: A: solanum glutinosum
B: one-grained wheat (aka triticum monococcum)
C: solanum tuberosum (solanum aracc-papa) (aka solanum tuberosum)
D: english wheat (aka triticum turgidum)
E: triticum
F: solanum giganteum
G: solanum nutans
H: solanum crispum (chilean potato-tree) (aka solanum crispum)
I: triticum aegilops (aka aegilops tauschii)
J: None of the above. | [J; C] |
<Instruct>: Given the context 'This situation might by explained by the fact that potato and wheat promoter sequences have no recognizable homologous motifs.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [potato; wheat]
<Options>: A: solanum rugosum
B: chaco potato (aka solanum chacoense)
C: triticum aegilops (aka aegilops tauschii)
D: triticum sativum (aka triticum aestivum)
E: solanum tuberosum (solanum aracc-papa) (aka solanum tuberosum)
F: triticum x secale (aka x triticosecale)
G: wild emmer wheat (aka triticum dicoccoides)
H: one-grained wheat (aka triticum monococcum)
I: solanum nutans
J: solanum giganteum
K: None of the above. | [E; D] |
<Instruct>: Given the context 'This situation might by explained by the fact that potato and wheat promoter sequences have no recognizable homologous motifs.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [potato; wheat]
<Options>: A: air-potato (aka dioscorea bulbifera)
B: chaco potato (aka solanum chacoense)
C: one-grained wheat (aka triticum monococcum)
D: potatoes (aka solanum tuberosum)
E: wild emmer wheat (aka triticum dicoccoides)
F: solanum glutinosum
G: bread wheat (aka triticum aestivum)
H: solanum insanum (solanum melongena var. insanum) (aka solanum insanum)
I: durum wheat (aka triticum turgidum subsp. durum)
J: triticum x secale (aka x triticosecale)
K: None of the above. | [D; G] |
<Instruct>: Given the context 'While the transcription initiation site in wheat mitochondria is located at position −170 (29), the potato promoter has not yet been described.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [wheat; potato]
<Options>: A: triticum tauschii (aka aegilops tauschii)
B: chaco potato (aka solanum chacoense)
C: potato (aka solanum tuberosum)
D: english wheat (aka triticum turgidum)
E: bread wheat (aka triticum aestivum)
F: dioscorea bulbifera (potato yam) (aka dioscorea bulbifera)
G: chinese-potato (aka dioscorea polystachya)
H: triticum strictum (aka secale strictum)
I: one-grained wheat (aka triticum monococcum)
J: solanum insanum (solanum melongena var. insanum) (aka solanum insanum)
K: None of the above. | [E; C] |
<Instruct>: Given the context 'While the transcription initiation site in wheat mitochondria is located at position −170 (29), the potato promoter has not yet been described.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [wheat; potato]
<Options>: A: potato (aka solanum tuberosum)
B: triticum strictum (aka secale strictum)
C: solanum
D: common wheat (aka triticum aestivum)
E: solanum insanum (solanum melongena var. insanum) (aka solanum insanum)
F: one-grained wheat (aka triticum monococcum)
G: solanum ipomoeoides
H: sweet potato (aka ipomoea batatas)
I: triticum aethiopicum (aka triticum turgidum)
J: triticum tauschii (aka aegilops tauschii)
K: None of the above. | [D; A] |
<Instruct>: Given the context 'However, the lack of crossed recognition of cox2 promoters in wheat and potato is not a general situation since the A.thaliana cox2 gene is expressed and spliced when introduced into maize mitochondria, indicating that the Arabidopsis gene shares some signals with maize cox2 promoter that are sufficient for transcription (18).', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [wheat; potato; a.thaliana; maize]
<Options>: A: triticum
B: zea mays subsp. mays x zea perennis
C: one-grained wheat (aka triticum monococcum)
D: sweet potato (aka ipomoea batatas)
E: maize (aka zea mays)
F: wild emmer wheat (aka triticum dicoccoides)
G: chilean potato-tree (aka solanum crispum)
H: arabidopsis thaliana x arabidopsis halleri
I: common wheat (aka triticum aestivum)
J: zea mays subsp. amylacea (aka zea mays subsp. mays)
K: arabidopsis thaliana x arabidopsis arenosa
L: zea mays subsp. mays x zea mays subsp. parviglumis
M: euphyia
N: arabidopsis sp.
O: air-potato (aka dioscorea bulbifera)
P: zea mays subsp. mays x zea mays subsp. mexicana
Q: solanum insanum (solanum melongena var. insanum) (aka solanum insanum)
R: triticum x secale (aka x triticosecale)
S: arabis thaliana (aka arabidopsis thaliana)
T: potato (aka solanum tuberosum)
U: None of the above. | [I; T; S; E] |
<Instruct>: Given the context 'However, the lack of crossed recognition of cox2 promoters in wheat and potato is not a general situation since the A.thaliana cox2 gene is expressed and spliced when introduced into maize mitochondria, indicating that the Arabidopsis gene shares some signals with maize cox2 promoter that are sufficient for transcription (18).', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [wheat; potato; a.thaliana; maize]
<Options>: A: arabidopsis sp.
B: zea mays subsp. mays x zea mays subsp. parviglumis
C: zea mexicana (aka zea mays subsp. mexicana)
D: triticum aethiopicum (aka triticum turgidum)
E: zea mays subsp. mays x zea perennis
F: solanum glutinosum
G: annea
H: arabis thaliana (aka arabidopsis thaliana)
I: durum wheat (aka triticum turgidum subsp. durum)
J: triticum aegilops (aka aegilops tauschii)
K: land plants (aka embryophyta)
L: chinese-potato (aka dioscorea polystachya)
M: solanum giganteum
N: australytta
O: triticum sativum (aka triticum aestivum)
P: solanum ipomoeoides
Q: solanum tuberosum (solanum aracc-papa) (aka solanum tuberosum)
R: zea mays var. japonica (aka zea mays)
S: zea mays subsp. amylacea (aka zea mays subsp. mays)
T: one-grained wheat (aka triticum monococcum)
U: None of the above. | [O; Q; H; R] |
<Instruct>: Given the context 'However, the lack of crossed recognition of cox2 promoters in wheat and potato is not a general situation since the A.thaliana cox2 gene is expressed and spliced when introduced into maize mitochondria, indicating that the Arabidopsis gene shares some signals with maize cox2 promoter that are sufficient for transcription (18).', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [wheat; potato; a.thaliana; maize]
<Options>: A: tuberaria
B: zea mays subsp. mays x zea mays subsp. parviglumis
C: euphyia
D: zea mays subsp. ramosa (aka zea mays subsp. mays)
E: arabidopsis thaliana x arabidopsis lyrata
F: wild emmer wheat (aka triticum dicoccoides)
G: triticum aethiopicum (aka triticum turgidum)
H: air-potato (aka dioscorea bulbifera)
I: solanum annuum
J: brassica
K: potato (aka solanum tuberosum)
L: arabidopsis sp.
M: bread wheat (aka triticum aestivum)
N: thale-cress (aka arabidopsis thaliana)
O: sweet potato (aka ipomoea batatas)
P: zea mays subsp. mays x zea perennis
Q: zea mays var. japonica (aka zea mays)
R: zea mexicana (aka zea mays subsp. mexicana)
S: triticum x secale (aka x triticosecale)
T: triticum
U: None of the above. | [M; K; N; Q] |
<Instruct>: Given the context 'However, the lack of crossed recognition of cox2 promoters in wheat and potato is not a general situation since the A.thaliana cox2 gene is expressed and spliced when introduced into maize mitochondria, indicating that the Arabidopsis gene shares some signals with maize cox2 promoter that are sufficient for transcription (18).', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [wheat; potato; a.thaliana; maize]
<Options>: A: solanum annuum
B: zea mexicana (aka zea mays subsp. mexicana)
C: euphyia
D: sweet potato (aka ipomoea batatas)
E: triticum x secale (aka x triticosecale)
F: triticum aethiopicum (aka triticum turgidum)
G: zea mays subsp. mays x zea mays subsp. parviglumis
H: thale-cress (aka arabidopsis thaliana)
I: potato (aka solanum tuberosum)
J: triticum
K: air-potato (aka dioscorea bulbifera)
L: wild emmer wheat (aka triticum dicoccoides)
M: arabidopsis sp.
N: zea mays subsp. mays x zea perennis
O: bread wheat (aka triticum aestivum)
P: tuberaria
Q: arabidopsis thaliana x arabidopsis lyrata
R: zea mays subsp. ramosa (aka zea mays subsp. mays)
S: brassica
T: None of the above. | [O; I; H; T] |
<Instruct>: Given the context 'However, the lack of crossed recognition of cox2 promoters in wheat and potato is not a general situation since the A.thaliana cox2 gene is expressed and spliced when introduced into maize mitochondria, indicating that the Arabidopsis gene shares some signals with maize cox2 promoter that are sufficient for transcription (18).', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [wheat; potato; a.thaliana; maize]
<Options>: A: potatoes (aka solanum tuberosum)
B: triticum vulgare (aka triticum aestivum)
C: zea mays subsp. mays x zea mays subsp. mexicana
D: rivet wheat (aka triticum turgidum)
E: zea mays subsp. ramosa (aka zea mays subsp. mays)
F: solanum annuum
G: triticum
H: thale-cress (aka arabidopsis thaliana)
I: euphyia
J: chinese-potato (aka dioscorea polystachya)
K: archeria
L: zea mays (zea mays var. japonica) (aka zea mays)
M: wild emmer wheat (aka triticum dicoccoides)
N: chaco potato (aka solanum chacoense)
O: solanum glutinosum
P: arabidopsis sp.
Q: triticum x secale (aka x triticosecale)
R: zea mexicana (aka zea mays subsp. mexicana)
S: beana
T: zea mays subsp. mays x zea mays subsp. parviglumis
U: None of the above. | [B; A; H; L] |
<Instruct>: Given the context 'However, the lack of crossed recognition of cox2 promoters in wheat and potato is not a general situation since the A.thaliana cox2 gene is expressed and spliced when introduced into maize mitochondria, indicating that the Arabidopsis gene shares some signals with maize cox2 promoter that are sufficient for transcription (18).', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [arabidopsis; maize]
<Options>: A: arabidopsis arenosa x arabidopsis thaliana
B: fabiana
C: zea mays subsp. mays (zea mays var. saccharata (sturtev.) l.h.bailey, 1902) (aka zea mays subsp. mays)
D: euphyia
E: zea mays subsp. mays x zea mays subsp. mexicana
F: zea mexicana (aka zea mays subsp. mexicana)
G: arabidopsis thaliana x arabidopsis halleri
H: zea mays subsp. mays x zea perennis
I: zea mays (zea mays var. japonica) (aka zea mays)
J: arabis thaliana (aka arabidopsis thaliana)
K: None of the above. | [J; I] |
<Instruct>: Given the context 'However, the lack of crossed recognition of cox2 promoters in wheat and potato is not a general situation since the A.thaliana cox2 gene is expressed and spliced when introduced into maize mitochondria, indicating that the Arabidopsis gene shares some signals with maize cox2 promoter that are sufficient for transcription (18).', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [arabidopsis; maize]
<Options>: A: fabiana
B: arabis thaliana (aka arabidopsis thaliana)
C: zea mexicana (aka zea mays subsp. mexicana)
D: zea mays subsp. mays x zea perennis
E: arabidopsis arenosa x arabidopsis thaliana
F: zea mays subsp. mays x zea mays subsp. mexicana
G: arabidella
H: arabidopsis (cardaminopsis) (aka arabidopsis)
I: zea mays var. japonica (aka zea mays)
J: zea mays var. mays (aka zea mays subsp. mays)
K: None of the above. | [B; I] |
<Instruct>: Given the context 'The sites required for transcript initiation have been recently described in A.thaliana mitochondrial genes (28).', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [a.thaliana]
<Options>: A: arabidopsis thaliana x arabidopsis arenosa
B: thale-cress (aka arabidopsis thaliana)
C: land plants (aka embryophyta)
D: euphyes
E: archeria
F: None of the above. | [B] |
<Instruct>: Given the context 'We found no such homologous sequences in the potato cox2 upstream region indicating that the two dicot promoters do not have the same origin.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [potato]
<Options>: A: solanum glutinosum
B: chaco potato (aka solanum chacoense)
C: chilean potato-tree (aka solanum crispum)
D: solanum giganteum
E: potato (aka solanum tuberosum)
F: None of the above. | [E] |
<Instruct>: Given the context 'We found no such homologous sequences in the potato cox2 upstream region indicating that the two dicot promoters do not have the same origin.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [potato]
<Options>: A: solanum glutinosum
B: chilean potato-tree (aka solanum crispum)
C: solanum giganteum
D: chaco potato (aka solanum chacoense)
E: None of the above. | [E] |
<Instruct>: Given the context 'It should be mentioned that the presence of a conserved sequence is not sufficient for expression since a region that acts as promoter in Arabidopsis, potato and Oenothera is inactive in vivo in pea (30).', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [arabidopsis; potato; pea]
<Options>: A: arabis thaliana (aka arabidopsis thaliana)
B: (arabidopsis thaliana x arabidopsis arenosa) x arabidopsis suecica
C: potato yam (aka dioscorea bulbifera)
D: white pea (aka lathyrus sativus)
E: euphyia
F: peafowls (aka pavo)
G: meadow pea (aka lathyrus pratensis)
H: red pea (aka lathyrus cicera)
I: potatoes (aka solanum tuberosum)
J: apophylia
K: garden pea (aka pisum sativum)
L: solanum insanum (solanum melongena var. insanum) (aka solanum insanum)
M: solanum giganteum
N: sweet potato (aka ipomoea batatas)
O: arabidopsis (cardaminopsis) (aka arabidopsis)
P: None of the above. | [A; I; K] |
<Instruct>: Given the context 'It should be mentioned that the presence of a conserved sequence is not sufficient for expression since a region that acts as promoter in Arabidopsis, potato and Oenothera is inactive in vivo in pea (30).', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [arabidopsis; potato; pea]
<Options>: A: pealius
B: unclassified arabidopsis
C: faba bean (aka vicia faba)
D: solanum nutans
E: wild pea (aka pisum sativum subsp. elatius)
F: apophyllum
G: arabideae
H: arabidopsis thaliana x arabidopsis arenosa
I: solanum tuberosum (solanum aracc-papa) (aka solanum tuberosum)
J: sweet potato (aka ipomoea batatas)
K: potato yam (aka dioscorea bulbifera)
L: marsh pea (aka lathyrus palustris)
M: peas (aka pisum sativum) (aka pisum sativum)
N: arabidopsis thaliana (mouse-ear cress) (aka arabidopsis thaliana)
O: chinese-potato (aka dioscorea polystachya)
P: None of the above. | [N; I; M] |
<Instruct>: Given the context 'It should be mentioned that the presence of a conserved sequence is not sufficient for expression since a region that acts as promoter in Arabidopsis, potato and Oenothera is inactive in vivo in pea (30).', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [arabidopsis; potato; pea]
<Options>: A: chaco potato (aka solanum chacoense)
B: white pea (aka lathyrus sativus)
C: solanum glutinosum
D: peafowls (aka pavo)
E: apophyllum
F: pisum sativum (peas (aka pisum sativum))
G: solanum annuum
H: ecphysis
I: solanum insanum (solanum melongena var. insanum) (aka solanum insanum)
J: pisum arvense (aka pisum sativum var. arvense)
K: arabidopsis thaliana (mouse-ear cress) (aka arabidopsis thaliana)
L: arabidopsis suecica (arabis thaliana subsp. suecica) (aka arabidopsis suecica)
M: sea-pea (aka lathyrus japonicus)
N: potato (aka solanum tuberosum)
O: fabiana
P: None of the above. | [K; N; F] |
<Instruct>: Given the context 'The potato rps10 gene controlled by a T.aestivum promoter (Figure 1A) was transcribed as a 1204 nt precursor in wheat mitochondria, but no traces of mature RNA were observed.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [potato; t.aestivum; wheat]
<Options>: A: sweet potato (aka ipomoea batatas)
B: triticum durum (aka triticum turgidum subsp. durum)
C: triticum strictum (aka secale strictum)
D: triticum aestivum (triticum aestivum subsp. aestivum) (aka triticum aestivum)
E: english wheat (aka triticum turgidum)
F: triticum aethiopicum (aka triticum turgidum)
G: solanum tuberosum (solanum aracc-papa) (aka solanum tuberosum)
H: triticum tauschii (aka aegilops tauschii)
I: triticum aestivum x secale anatolicum
J: triticum aestivum subsp. tibeticum (tibetan wheat) (aka triticum aestivum subsp. tibeticum)
K: solanum giganteum
L: chaco potato (aka solanum chacoense)
M: solanum
N: None of the above. | [G; D; D] |
<Instruct>: Given the context 'The potato rps10 gene controlled by a T.aestivum promoter (Figure 1A) was transcribed as a 1204 nt precursor in wheat mitochondria, but no traces of mature RNA were observed.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [potato; t.aestivum; wheat]
<Options>: A: solanum ipomoeoides
B: triticum aestivum subsp. tibeticum (tibetan wheat) (aka triticum aestivum subsp. tibeticum)
C: triticum turgidum subsp. pyramidale (triticum pyramidale) (aka triticum turgidum subsp. pyramidale)
D: bread wheat (aka triticum aestivum)
E: tuberaria
F: english wheat (aka triticum turgidum)
G: solanum giganteum
H: potatoes (aka solanum tuberosum)
I: triticum
J: solanum insanum (solanum melongena var. insanum) (aka solanum insanum)
K: one-grained wheat (aka triticum monococcum)
L: triticum durum (aka triticum turgidum subsp. durum)
M: durum wheat (aka triticum turgidum subsp. durum)
N: triticum aethiopicum (aka triticum turgidum)
O: None of the above. | [H; D; D] |
<Instruct>: Given the context 'The potato rps10 gene controlled by a T.aestivum promoter (Figure 1A) was transcribed as a 1204 nt precursor in wheat mitochondria, but no traces of mature RNA were observed.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [potato; t.aestivum; wheat]
<Options>: A: solanum
B: triticum turgidum subsp. pyramidale (triticum pyramidale) (aka triticum turgidum subsp. pyramidale)
C: triticum vulgare var. miltura (aka triticum aestivum var. milturum)
D: triticum
E: durum wheat (aka triticum turgidum subsp. durum)
F: triticum durum (aka triticum turgidum subsp. durum)
G: wheat (aka triticum aestivum)
H: solanum tuberosum (solanum aracc-papa) (aka solanum tuberosum)
I: wild emmer wheat (aka triticum dicoccoides)
J: chaco potato (aka solanum chacoense)
K: triticum aestivum x secale anatolicum
L: solanum ipomoeoides
M: triticum aethiopicum (aka triticum turgidum)
N: solanum giganteum
O: None of the above. | [H; G; G] |
<Instruct>: Given the context 'Moreover, the five C residues reported as RNA editing targets in vivo (23) remain unchanged, indicating that rps10 transcript was not recognized by the wheat splicing and editing machinery.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [wheat]
<Options>: A: triticum durum (aka triticum turgidum subsp. durum)
B: triticum aestivum (triticum aestivum subsp. aestivum) (aka triticum aestivum)
C: triticum x secale (aka x triticosecale)
D: one-grained wheat (aka triticum monococcum)
E: triticum
F: None of the above. | [B] |
<Instruct>: Given the context 'Based on the canonical structure of group II mitochondrial introns (21), two editing sites, C2 located at the Intron Binding Site 2 (IBS2) and C3 located in the intron, nine residues downstream from the end of exon 1 in S.tuberosum rps10 are of particular interest.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [s.tuberosum]
<Options>: A: solanum glabratum
B: solanum trifolium
C: tuberosum group
D: solanum succosum
E: potatoes (aka solanum tuberosum)
F: None of the above. | [E] |
<Instruct>: Given the context 'Based on the canonical structure of group II mitochondrial introns (21), two editing sites, C2 located at the Intron Binding Site 2 (IBS2) and C3 located in the intron, nine residues downstream from the end of exon 1 in S.tuberosum rps10 are of particular interest.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [s.tuberosum]
<Options>: A: solanum glabratum
B: tuberosum group
C: solanum trifolium
D: solanum succosum
E: None of the above. | [E] |
<Instruct>: Given the context 'This position may be crucial for splicing as inferred from mutants of a yeast mitochondrial intron (32).', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [yeast]
<Options>: A: saccharomyces cerevisiae (desm.) meyen ex e.c. hansen, 1883 (aka saccharomyces cerevisiae)
B: saccharomycodes
C: saccharomyces hansenii (aka debaryomyces hansenii)
D: saccharomyces sp.
E: saccharomyces lactis (aka kluyveromyces lactis)
F: None of the above. | [A] |
<Instruct>: Given the context 'These results clearly demonstrate that C2 and C3 editing is not sufficient for splicing of rps10 precursor in wheat mitochondria and lead us to conclude that splicing failure is probably linked to the lack of trans-recognition elements.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [wheat]
<Options>: A: triticum strictum (aka secale strictum)
B: triticum x secale (aka x triticosecale)
C: common wheat (aka triticum aestivum)
D: one-grained wheat (aka triticum monococcum)
E: english wheat (aka triticum turgidum)
F: None of the above. | [C] |
<Instruct>: Given the context 'The C-to-U mutants were also tested in potato mitochondria; no significant differences were detected in splicing efficiency when compared to the unedited construct (D. Choury, unpublished data).', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [potato]
<Options>: A: solanum tuberosum (solanum aracc-papa) (aka solanum tuberosum)
B: solanum nutans
C: sweet potato (aka ipomoea batatas)
D: dioscorea bulbifera (potato yam) (aka dioscorea bulbifera)
E: chinese-potato (aka dioscorea polystachya)
F: None of the above. | [A] |
<Instruct>: Given the context 'It should be noted that the lack of splicing in wheat mitochondria is not a general feature of potato introns, since the potato cox2 intron is removed efficiently (Figure 4B).', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [wheat; potato]
<Options>: A: triticum durum (aka triticum turgidum subsp. durum)
B: one-grained wheat (aka triticum monococcum)
C: solanum
D: potato (aka solanum tuberosum)
E: dioscorea bulbifera (potato yam) (aka dioscorea bulbifera)
F: triticum
G: solanum crispum (chilean potato-tree) (aka solanum crispum)
H: common wheat (aka triticum aestivum)
I: english wheat (aka triticum turgidum)
J: sweet potato (aka ipomoea batatas)
K: None of the above. | [H; D] |
<Instruct>: Given the context 'It should be noted that the lack of splicing in wheat mitochondria is not a general feature of potato introns, since the potato cox2 intron is removed efficiently (Figure 4B).', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [wheat; potato]
<Options>: A: triticum strictum (aka secale strictum)
B: solanum tuberosum (solanum aracc-papa) (aka solanum tuberosum)
C: one-grained wheat (aka triticum monococcum)
D: solanum
E: solanum glutinosum
F: wild emmer wheat (aka triticum dicoccoides)
G: solanum annuum
H: chinese-potato (aka dioscorea polystachya)
I: triticum aegilops (aka aegilops tauschii)
J: triticum aestivum subsp. aestivum (aka triticum aestivum)
K: None of the above. | [J; B] |
<Instruct>: Given the context 'This is consistent with the hypothesis that potato and wheat mitochondria have similar trans-acting factors for cox2 intron removal.
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [potato; wheat]
<Options>: A: triticum aegilops (aka aegilops tauschii)
B: dioscorea bulbifera (potato yam) (aka dioscorea bulbifera)
C: triticum durum (aka triticum turgidum subsp. durum)
D: chaco potato (aka solanum chacoense)
E: solanum nutans
F: triticum aethiopicum (aka triticum turgidum)
G: triticum
H: bread wheat (aka triticum aestivum)
I: solanum
J: potato (aka solanum tuberosum)
K: None of the above. | [J; H] |
<Instruct>: Given the context 'This is consistent with the hypothesis that potato and wheat mitochondria have similar trans-acting factors for cox2 intron removal.
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [potato; wheat]
<Options>: A: solanum annuum
B: triticum
C: solanum insanum (solanum melongena var. insanum) (aka solanum insanum)
D: triticum sativum (aka triticum aestivum)
E: one-grained wheat (aka triticum monococcum)
F: triticum strictum (aka secale strictum)
G: solanum
H: potato (aka solanum tuberosum)
I: solanum ipomoeoides
J: triticum aethiopicum (aka triticum turgidum)
K: None of the above. | [H; D] |
<Instruct>: Given the context 'In rice, failure of RNA maturation and editing has been correlated with cytoplasmic male sterile phenotype.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [rice]
<Options>: A: oryza sativa (japonica cultivar-group) (aka oryza sativa japonica group)
B: ricegrass (aka oryzopsis)
C: asian cultivated rice (aka oryza sativa)
D: oryza sativa aus (aka oryza sativa aus subgroup)
E: common wild rice (aka oryza rufipogon)
F: None of the above. | [C] |
<Instruct>: Given the context 'In organello studies have shown that S.bicolor atp6-1 gene was transcribed but not edited when introduced into maize mitochondria (18).', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [s.bicolor; maize]
<Options>: A: scarus bicolor (aka cetoscarus bicolor)
B: sulawesidrobia bicolor
C: zea mays subsp. mays x zea perennis
D: aporus bicolor (aporus (aporus) bicolor) (aka aporus bicolor)
E: zea mays subsp. mays x zea mays subsp. parviglumis
F: snellenius bicolor
G: trochilus bicolor (aka riccordia bicolor)
H: maize (aka zea mays)
I: zea mexicana (aka zea mays subsp. mexicana)
J: zea mays subsp. mays x zea mays subsp. mexicana
K: None of the above. | [K; H] |
<Instruct>: Given the context 'In organello studies have shown that S.bicolor atp6-1 gene was transcribed but not edited when introduced into maize mitochondria (18).', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [s.bicolor; maize]
<Options>: A: monotoma bicolor
B: sulawesidrobia bicolor
C: melipona bicolor subsp. bicolor (aka melipona bicolor bicolor)
D: lepisorus bicolor
E: zea mays subsp. mays (zea mays var. saccharata (sturtev.) l.h.bailey, 1902) (aka zea mays subsp. mays)
F: zea mays subsp. mays x zea perennis
G: chymomyza bicolor
H: maize (aka zea mays)
I: zea mays subsp. mays x zea mays subsp. parviglumis
J: zea mexicana (aka zea mays subsp. mexicana)
K: None of the above. | [K; H] |
<Instruct>: Given the context 'However, partially edited molecules were detected in sorghum-maize atp6 chimeric transcripts when they included the maize atp6 5′-untranslated sequence, suggesting that the 5′ non-coding region provides a structural motif or binding site for a transcript-specific editing factor (34).', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [sorghum; maize]
<Options>: A: zea mexicana (aka zea mays subsp. mexicana)
B: sorghum (hemisorghum) (aka sorghum)
C: zea mays subsp. mays x zea perennis
D: sorghum bicolor (sorghum bicolor subsp. bicolor) (aka sorghum bicolor)
E: sorghum angustum
F: zea mays subsp. mays x zea mays subsp. parviglumis
G: sorghum sorghoides (cleistachne sorghoides) (aka sorghum sorghoides)
H: zea mays var. japonica (aka zea mays)
I: zea mays subsp. mays x zea mays subsp. mexicana
J: johnson grass (aka sorghum halepense)
K: None of the above. | [D; H] |
<Instruct>: Given the context 'However, partially edited molecules were detected in sorghum-maize atp6 chimeric transcripts when they included the maize atp6 5′-untranslated sequence, suggesting that the 5′ non-coding region provides a structural motif or binding site for a transcript-specific editing factor (34).', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [sorghum; maize]
<Options>: A: johnson grass (aka sorghum halepense)
B: zea mays subsp. mays x zea perennis
C: maize (aka zea mays subsp. mays)
D: sorghum bicolor (sorghum bicolor subsp. bicolor) (aka sorghum bicolor)
E: sorghum brachypodum
F: zea mexicana (aka zea mays subsp. mexicana)
G: sorghum bicolor var. virgatum (aka sorghum virgatum)
H: common wild sorghum (aka sorghum arundinaceum)
I: zea mays subsp. mays x zea mays subsp. mexicana
J: zea mays var. japonica (aka zea mays)
K: None of the above. | [D; J] |
<Instruct>: Given the context 'However, partially edited molecules were detected in sorghum-maize atp6 chimeric transcripts when they included the maize atp6 5′-untranslated sequence, suggesting that the 5′ non-coding region provides a structural motif or binding site for a transcript-specific editing factor (34).', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [sorghum; maize]
<Options>: A: johnson grass (aka sorghum halepense)
B: sorghum bicolor var. virgatum (aka sorghum virgatum)
C: zea mays subsp. mays x zea mays subsp. mexicana
D: sorghum brachypodum
E: zea mays subsp. mays x zea perennis
F: sorghum bicolor (sorghum bicolor subsp. bicolor) (aka sorghum bicolor)
G: common wild sorghum (aka sorghum arundinaceum)
H: maize (aka zea mays subsp. mays)
I: zea mexicana (aka zea mays subsp. mexicana)
J: None of the above. | [F; J] |
<Instruct>: Given the context 'Since wheat mitochondria do not have rps10 encoded in the mitochondrial genome (20), it was interesting to test whether wheat mitochondria were able to recognize editing sites which had been lost during evolution.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [wheat]
<Options>: A: triticum
B: triticum sativum (aka triticum aestivum)
C: one-grained wheat (aka triticum monococcum)
D: poulard wheat (aka triticum turgidum)
E: wild emmer wheat (aka triticum dicoccoides)
F: None of the above. | [B] |
<Instruct>: Given the context 'As described above, the rps10 transcript was not processed in wheat but it was correctly spliced in cognate mitochondria (Figure 5A).', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [wheat]
<Options>: A: common wheat (aka triticum aestivum)
B: triticum tauschii (aka aegilops tauschii)
C: triticum
D: durum wheat (aka triticum turgidum subsp. durum)
E: triticum x secale (aka x triticosecale)
F: None of the above. | [A] |
<Instruct>: Given the context 'The fact that the four editing sites were found either edited or unedited in spliced rps10 mRNA is an indication that editing does not precede splicing as was previously found for cox2 in wheat (15).
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [wheat]
<Options>: A: one-grained wheat (aka triticum monococcum)
B: wheat (aka triticum aestivum)
C: triticum aegilops (aka aegilops tauschii)
D: triticum
E: wild emmer wheat (aka triticum dicoccoides)
F: None of the above. | [B] |
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