instruction stringlengths 225 2.35k | input stringlengths 89 1.5k | response stringclasses 698 values |
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<Instruct>: Given the context 'MATERIALS AND METHODS Isolation of genomic fragments encoding murine ribonucleases by polymerase chain reaction (PCR) Genomic DNA was isolated from cells of the murine 3T3 fibroblast cell line.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [murine]
<Options>: A: mus sp. (mice (aka mus sp.))
B: mus musculus (house mouse) (aka mus musculus)
C: mus domesticus (aka mus musculus domesticus)
D: mus norvegicus (aka rattus norvegicus)
E: mus musculoides (mus musculoides enclavae) (aka mus musculoides)
F: None of the above. | [B] |
<Instruct>: Given the context 'Email: hr2k@nih.gov Present addresses: +Duke University School of Medicine, Durham, NC 27701, USA and �Department of Pediatrics, State University of New York-Health Sciences Center at Syracuse, Syracuse, NY 13210, USA
4236 Nucleic Acids Research, 1997, Vol. 25, No. 21
Figure 1. (A) Alignment of amino acid sequences encoded by six related murine ribonuclease genes.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [murine]
<Options>: A: mus (aka mus <subgenus>) (aka mus <subgenus>)
B: eastern european house mouse (aka mus musculus musculus)
C: mus musculus (house mouse) (aka mus musculus)
D: mice (aka mus <genus>) (aka mus <genus>)
E: peromyscus
F: None of the above. | [C] |
<Instruct>: Given the context 'GenBank accession numbers: mEAR (murine eosinophil-associated ribonuclease)-1, U72032; mEAR-2, U72031; mR (murine ribonuclease)-3, AF017258; mR-4, AF017259; mR-5, AF017260; mR-6P (pseudogene), AF017261.
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [murine]
<Options>: A: house mouse (aka mus musculus)
B: mus norvegicus (aka rattus norvegicus)
C: mus cricetus (aka cricetus cricetus)
D: mus musculoides (mus musculoides enclavae) (aka mus musculoides)
E: mus <genus> (mice (aka mus <genus>))
F: None of the above. | [A] |
<Instruct>: Given the context 'GenBank accession numbers: mEAR (murine eosinophil-associated ribonuclease)-1, U72032; mEAR-2, U72031; mR (murine ribonuclease)-3, AF017258; mR-4, AF017259; mR-5, AF017260; mR-6P (pseudogene), AF017261.
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [murine]
<Options>: A: mus <genus> (mice (aka mus <genus>))
B: mus musculoides (mus musculoides enclavae) (aka mus musculoides)
C: mus norvegicus (aka rattus norvegicus)
D: mus cricetus (aka cricetus cricetus)
E: None of the above. | [E] |
<Instruct>: Given the context 'Northern analysis The murine multi-tissue Northern blot was purchased from Clontech, and pre-hybridized and hybridized as per manufacturer's instructions with radiolabelled oligonucleotide probes.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [murine]
<Options>: A: mice (aka mus sp.) (aka mus sp.)
B: eastern european house mouse (aka mus musculus musculus)
C: mouse (aka mus musculus)
D: mus musculus domesticus (western european house mouse) (aka mus musculus domesticus)
E: mus musculoides (mus musculoides enclavae) (aka mus musculoides)
F: None of the above. | [C] |
<Instruct>: Given the context '4237 Nucleic Acids Research, 1997, Vol. 25, No. Nucleic Acids Research, 1994, Vol. 22, No. 121 4237
Figure 2. (A) Dendrogram depicting relationships among the eight characterized murine ribonucleases as determined by a modified UPGMA method (17).', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [murine]
<Options>: A: peromyscus
B: mus cricetus (aka cricetus cricetus)
C: mus musculus domesticus (western european house mouse) (aka mus musculus domesticus)
D: mus musculus (house mouse) (aka mus musculus)
E: mus sp. (mice (aka mus sp.))
F: None of the above. | [D] |
<Instruct>: Given the context 'Abbreviations are as in Figure 1A, also mPR (murine pancreatic ribonuclease, sw:rnp_mouse), mANG (murine angiogenin, U72672), hEDN (human eosinophil-derived neurotoxin, M24157), hECP (human eosinophil cationic protein, X15161), hRK6 (human ribonuclease k6, U64998), pRK6 (porcine kidney ribonuclease (24), and bRK6 (bovine kidney ribonuclease, sw:rnkd_bovin).', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [murine; mouse; human]
<Options>: A: eutherian mammals (aka eutheria)
B: avian (aka aves)
C: human (aka homo sapiens)
D: macrobiotus sapiens
E: mus <genus> (mice (aka mus <genus>))
F: genus
G: mus musculoides (mus musculoides enclavae) (aka mus musculoides)
H: mus musculus domesticus (western european house mouse) (aka mus musculus domesticus)
I: mus sp. (mice (aka mus sp.))
J: peromyscus
K: eastern european house mouse (aka mus musculus musculus)
L: mouse (aka mus musculus)
M: None of the above. | [L; L; C] |
<Instruct>: Given the context 'Abbreviations are as in Figure 1A, also mPR (murine pancreatic ribonuclease, sw:rnp_mouse), mANG (murine angiogenin, U72672), hEDN (human eosinophil-derived neurotoxin, M24157), hECP (human eosinophil cationic protein, X15161), hRK6 (human ribonuclease k6, U64998), pRK6 (porcine kidney ribonuclease (24), and bRK6 (bovine kidney ribonuclease, sw:rnkd_bovin).', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [murine; mouse; human]
<Options>: A: mus <subgenus> (mus (aka mus <subgenus>))
B: house mouse (aka mus musculus)
C: mus cricetus (aka cricetus cricetus)
D: probles
E: western european house mouse (aka mus musculus domesticus)
F: mus musculoides (mus musculoides enclavae) (aka mus musculoides)
G: mus sp. (mice (aka mus sp.))
H: mus norvegicus (aka rattus norvegicus)
I: biota (aka cellular organisms)
J: suborder
K: peromyscus
L: homo (humans) (aka homo)
M: homo sapiens (human) (aka homo sapiens)
N: None of the above. | [B; B; M] |
<Instruct>: Given the context 'Abbreviations are as in Figure 1A, also mPR (murine pancreatic ribonuclease, sw:rnp_mouse), mANG (murine angiogenin, U72672), hEDN (human eosinophil-derived neurotoxin, M24157), hECP (human eosinophil cationic protein, X15161), hRK6 (human ribonuclease k6, U64998), pRK6 (porcine kidney ribonuclease (24), and bRK6 (bovine kidney ribonuclease, sw:rnkd_bovin).', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [murine; mouse; human]
<Options>: A: mus sp. (mice (aka mus sp.))
B: western european house mouse (aka mus musculus domesticus)
C: genus
D: mouse (aka mus musculus)
E: homo sapiens (human) (aka homo sapiens)
F: eastern european house mouse (aka mus musculus musculus)
G: mus cricetus (aka cricetus cricetus)
H: mice (aka mus <genus>) (aka mus <genus>)
I: mus molossinus (aka mus musculus molossinus)
J: species
K: mus <subgenus> (mus (aka mus <subgenus>))
L: suborder
M: probles
N: mus (aka mus <genus>) (aka mus <genus>)
O: None of the above. | [D; D; E] |
<Instruct>: Given the context 'Abbreviations are as in Figure 1A, also mPR (murine pancreatic ribonuclease, sw:rnp_mouse), mANG (murine angiogenin, U72672), hEDN (human eosinophil-derived neurotoxin, M24157), hECP (human eosinophil cationic protein, X15161), hRK6 (human ribonuclease k6, U64998), pRK6 (porcine kidney ribonuclease (24), and bRK6 (bovine kidney ribonuclease, sw:rnkd_bovin).', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [human; bovine]
<Options>: A: primate (aka primates)
B: domestic cattle (aka bos taurus)
C: macrobiotus sapiens
D: human (aka homo sapiens)
E: bos sp.
F: birds (aka aves)
G: bos bubalis (aka bubalus bubalis)
H: bos taurus indicus (aka bos indicus)
I: animals (aka metazoa)
J: boveria
K: None of the above. | [D; B] |
<Instruct>: Given the context 'Abbreviations are as in Figure 1A, also mPR (murine pancreatic ribonuclease, sw:rnp_mouse), mANG (murine angiogenin, U72672), hEDN (human eosinophil-derived neurotoxin, M24157), hECP (human eosinophil cationic protein, X15161), hRK6 (human ribonuclease k6, U64998), pRK6 (porcine kidney ribonuclease (24), and bRK6 (bovine kidney ribonuclease, sw:rnkd_bovin).', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [human; bovine]
<Options>: A: bos indicus (bos primigenius indicus) (aka bos indicus)
B: bos bubalis (aka bubalus bubalis)
C: homo sapiens (human) (aka homo sapiens)
D: bos taurus x bos indicus (aka bos indicus x bos taurus)
E: bovinae
F: mammals (aka mammalia)
G: probles
H: domestic cow (aka bos taurus)
I: species
J: this
K: None of the above. | [C; H] |
<Instruct>: Given the context 'Amino acid sequence comparisons of murine and human ribonucleases
Sequence analysis All DNA sequence analysis and comparisons were performed with the assistance of the Wisconsin Genetics Computer Group and Sequencher (Gene Codes Corporation) programs available at the National Institutes of Health.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [murine; human]
<Options>: A: mus musculoides (mus musculoides enclavae) (aka mus musculoides)
B: eastern european house mouse (aka mus musculus musculus)
C: mice (aka mus <genus>) (aka mus <genus>)
D: human (aka homo sapiens)
E: macrobiotus sapiens
F: mus musculus (house mouse) (aka mus musculus)
G: mice (aka mus sp.) (aka mus sp.)
H: probles
I: birds (aka aves)
J: animals (aka metazoa)
K: None of the above. | [F; D] |
<Instruct>: Given the context 'Amino acid sequence comparisons of murine and human ribonucleases
Sequence analysis All DNA sequence analysis and comparisons were performed with the assistance of the Wisconsin Genetics Computer Group and Sequencher (Gene Codes Corporation) programs available at the National Institutes of Health.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [murine; human]
<Options>: A: mus cricetus (aka cricetus cricetus)
B: homo (humans) (aka homo)
C: mus musculoides (mus musculoides enclavae) (aka mus musculoides)
D: genus
E: mus <genus> (mice (aka mus <genus>))
F: birds (aka aves)
G: mus <subgenus> (mus (aka mus <subgenus>))
H: this
I: mouse (aka mus musculus)
J: homo sapiens (human) (aka homo sapiens)
K: None of the above. | [I; J] |
<Instruct>: Given the context 'RESULTS Isolation of genomic fragments encoding novel murine ribonucleases The alignment in Figure 1A displays the amino acid sequences encoded by the six related ribonuclease genes.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [murine]
<Options>: A: mus norvegicus (aka rattus norvegicus)
B: mus sp. (mice (aka mus sp.))
C: mus musculoides (mus musculoides enclavae) (aka mus musculoides)
D: eastern european house mouse (aka mus musculus musculus)
E: house mouse (aka mus musculus)
F: None of the above. | [E] |
<Instruct>: Given the context 'RESULTS Isolation of genomic fragments encoding novel murine ribonucleases The alignment in Figure 1A displays the amino acid sequences encoded by the six related ribonuclease genes.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [murine]
<Options>: A: eastern european house mouse (aka mus musculus musculus)
B: mus sp. (mice (aka mus sp.))
C: mus musculoides (mus musculoides enclavae) (aka mus musculoides)
D: mus norvegicus (aka rattus norvegicus)
E: None of the above. | [E] |
<Instruct>: Given the context 'Murine eosinophil-associated ribonucleases-1 and -2 (mEAR-1 and mEAR-2) are the predicted amino acid sequences from two genes described previously by Larson and colleagues (15); murine ribonucleases 3, 4, 5 and 6-pseudogene (mR-3, mR-4, mR-5 and mR-6P), are the predicted amino acid sequences encoded by novel DNA
hEDN mEAR-1 mEAR-2 mR-3 mR-4 mR-5 mANG mPR 56 56 54 60 60 43 53
hECP 59 59 57 59 58 49 52
hRK6 58 59 59 53 56 49 59
hPR 47 48 49 48 57 55 79
hR4 50 53 51 52 54 57 66
hANG 49 48 51 47 47 80 60
Values are expressed as percent similarity between pairs of amino acid sequences as determined by the BESTFIT algorithm of the Wisconsin Genetics Computer Group program on-line at the National Institutes of Health.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [murine]
<Options>: A: mus cricetus (aka cricetus cricetus)
B: mus musculoides (mus musculoides enclavae) (aka mus musculoides)
C: mouse (aka mus musculus)
D: mus (aka mus <genus>) (aka mus <genus>)
E: eastern european house mouse (aka mus musculus musculus)
F: None of the above. | [C] |
<Instruct>: Given the context 'Abbreviations are as defined in Figures 1 and 2, and also include hR4 (human ribonuclease 4, sw:rnl4_human), hANG (human angiogenin, M11567), and hPR (human pancreatic ribonuclease, X62946).
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [human]
<Options>: A: human (aka homo sapiens)
B: this
C: placental mammals (aka eutheria)
D: mammals (aka mammalia)
E: homo (humans) (aka homo)
F: None of the above. | [A] |
<Instruct>: Given the context '4238 Nucleic Acids Research, 1997, Vol. 25, No. 21 fragments amplified from murine genomic DNA.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [murine]
<Options>: A: mouse (aka mus musculus)
B: mus musculus domesticus (western european house mouse) (aka mus musculus domesticus)
C: mus <subgenus> (mus (aka mus <subgenus>))
D: mice (aka mus sp.) (aka mus sp.)
E: peromyscus
F: None of the above. | [A] |
<Instruct>: Given the context 'Relationships among the murine ribonucleases A dendrogram depicting the relationships among several of the murine and human ribonucleases is shown in Figure 2A.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [murine; human]
<Options>: A: animals (aka metazoa)
B: mus (aka mus <subgenus>) (aka mus <subgenus>)
C: eutherian mammals (aka eutheria)
D: mice (aka mus sp.) (aka mus sp.)
E: avian (aka aves)
F: homo sapiens (human) (aka homo sapiens)
G: primate (aka primates)
H: mus cricetus (aka cricetus cricetus)
I: mouse (aka mus musculus)
J: mus musculoides (mus musculoides enclavae) (aka mus musculoides)
K: None of the above. | [I; F] |
<Instruct>: Given the context 'Relationships among the murine ribonucleases A dendrogram depicting the relationships among several of the murine and human ribonucleases is shown in Figure 2A.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [murine; human]
<Options>: A: humans (aka homo)
B: probles
C: mouse (aka mus musculus)
D: kingdom
E: mice (aka mus <genus>) (aka mus <genus>)
F: mus domesticus (aka mus musculus domesticus)
G: peromyscus
H: mus cricetus (aka cricetus cricetus)
I: human (aka homo sapiens)
J: macrobiotus sapiens
K: None of the above. | [C; I] |
<Instruct>: Given the context 'These six sequences are more closely related to one another than they are to either murine pancreatic ribonuclease (mPR) or to murine angiogenin (mANG) or to any of the three human ribonucleases shown (hEDN, hECP or hRK6).', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [murine; human]
<Options>: A: animals (aka metazoa)
B: mouse (aka mus musculus)
C: eastern european house mouse (aka mus musculus musculus)
D: this
E: homo sapiens (human) (aka homo sapiens)
F: species
G: mus domesticus (aka mus musculus domesticus)
H: mus (aka mus <subgenus>) (aka mus <subgenus>)
I: primate (aka primates)
J: mice (aka mus sp.) (aka mus sp.)
K: None of the above. | [B; E] |
<Instruct>: Given the context 'These six sequences are more closely related to one another than they are to either murine pancreatic ribonuclease (mPR) or to murine angiogenin (mANG) or to any of the three human ribonucleases shown (hEDN, hECP or hRK6).', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [murine; human]
<Options>: A: mouse (aka mus musculus)
B: probles
C: mus musculoides (mus musculoides enclavae) (aka mus musculoides)
D: mus <subgenus> (mus (aka mus <subgenus>))
E: human (aka homo sapiens)
F: mammals (aka mammalia)
G: avian (aka aves)
H: mus domesticus (aka mus musculus domesticus)
I: suborder
J: mus norvegicus (aka rattus norvegicus)
K: None of the above. | [A; E] |
<Instruct>: Given the context 'Northern analysis Tissue-specific expression of mRNA encoding these murine ribonucleases is shown in Figure 3.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [murine]
<Options>: A: mice (aka mus <genus>) (aka mus <genus>)
B: mouse (aka mus musculus)
C: mus cricetus (aka cricetus cricetus)
D: mice (aka mus sp.) (aka mus sp.)
E: peromyscus
F: None of the above. | [B] |
<Instruct>: Given the context 'A prominent mRNA of 1.8 kb was also detected in mRNA isolated from murine testicular tissue; fainter hybridizing mRNAs of varying size were detected in lung and skeletal muscle.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [murine]
<Options>: A: house mouse (aka mus musculus)
B: mus musculoides (mus musculoides enclavae) (aka mus musculoides)
C: mus (aka mus <subgenus>) (aka mus <subgenus>)
D: eastern european house mouse (aka mus musculus musculus)
E: mus cricetus (aka cricetus cricetus)
F: None of the above. | [A] |
<Instruct>: Given the context 'The size variation may represent differential splicing of the mR-5-encoding mRNA, or may represent mRNAs encoding one or more as yet undiscovered murine ribonucleases that are more closely related to mR-5 than those whose sequences are reported here.
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [murine]
<Options>: A: house mouse (aka mus musculus)
B: western european house mouse (aka mus musculus domesticus)
C: mus musculoides (mus musculoides enclavae) (aka mus musculoides)
D: mus norvegicus (aka rattus norvegicus)
E: mus cricetus (aka cricetus cricetus)
F: None of the above. | [A] |
<Instruct>: Given the context 'Figure 3. (A) Murine RNA probed with a 32 bp oligonucleotide complementary to mEAR-1, mEAR-2 and mR-3 coding sequences.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [murine]
<Options>: A: western european house mouse (aka mus musculus domesticus)
B: mus musculus (house mouse) (aka mus musculus)
C: mice (aka mus sp.) (aka mus sp.)
D: mus musculus musculus (eastern european house mouse) (aka mus musculus musculus)
E: mus (aka mus <subgenus>) (aka mus <subgenus>)
F: None of the above. | [B] |
<Instruct>: Given the context '(C) Same as in (A), probed with a 48 bp oligonucleotide complementary to human actin (16), demonstrating relative loading of each lane.
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [human]
<Options>: A: mammals (aka mammalia)
B: birds (aka aves)
C: kingdom
D: homo sapiens (human) (aka homo sapiens)
E: humans (aka homo)
F: None of the above. | [D] |
<Instruct>: Given the context 'Relationship to human ribonucleases The data in Table 1 denote the amino acid sequence similarity between pairs of murine and human ribonucleases of the RNase A superfamily.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [human; murine]
<Options>: A: mouse (aka mus musculus)
B: biota (aka cellular organisms)
C: mus norvegicus (aka rattus norvegicus)
D: avian (aka aves)
E: peromyscus
F: homo sapiens (human) (aka homo sapiens)
G: macrobiotus sapiens
H: mus (aka mus <genus>) (aka mus <genus>)
I: mus <subgenus> (mus (aka mus <subgenus>))
J: kingdom
K: None of the above. | [F; A] |
<Instruct>: Given the context 'Relationship to human ribonucleases The data in Table 1 denote the amino acid sequence similarity between pairs of murine and human ribonucleases of the RNase A superfamily.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [human; murine]
<Options>: A: mus musculus (house mouse) (aka mus musculus)
B: probles
C: human (aka homo sapiens)
D: mus (aka mus <subgenus>) (aka mus <subgenus>)
E: cellular organisms (biota) (aka cellular organisms)
F: peromyscus
G: mouse (aka mus <genus>)
H: species
I: mus cricetus (aka cricetus cricetus)
J: primate (aka primates)
K: None of the above. | [C; A] |
<Instruct>: Given the context 'Relationship to human ribonucleases The data in Table 1 denote the amino acid sequence similarity between pairs of murine and human ribonucleases of the RNase A superfamily.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [human; murine]
<Options>: A: cellular organisms (biota) (aka cellular organisms)
B: mouse (aka mus <genus>)
C: species
D: primate (aka primates)
E: peromyscus
F: mus (aka mus <subgenus>) (aka mus <subgenus>)
G: probles
H: mus musculus (house mouse) (aka mus musculus)
I: mus cricetus (aka cricetus cricetus)
J: None of the above. | [J; H] |
<Instruct>: Given the context 'Although the sequences of the mEAR-1/mEAR-2/mR-3 subgroup are slightly more similar to ECP and RNase k6, and mR-4 and mR-5, to EDN and ECP, the orthologous relationships of these murine ribonucleases cannot be discerned from these data.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [murine]
<Options>: A: mus musculus (house mouse) (aka mus musculus)
B: mice (aka mus <genus>) (aka mus <genus>)
C: mus norvegicus (aka rattus norvegicus)
D: mus sp. (mice (aka mus sp.))
E: mus musculus musculus (eastern european house mouse) (aka mus musculus musculus)
F: None of the above. | [A] |
<Instruct>: Given the context 'This stands in direct contrast to mPR and mANG, whose human orthologs can be clearly distinguished on the basis of their amino acid sequence homologies.
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [human]
<Options>: A: primate (aka primates)
B: kingdom
C: human (aka homo sapiens)
D: this
E: mammals (aka mammalia)
F: None of the above. | [C] |
<Instruct>: Given the context 'DISCUSSION In this work, we have identified four novel murine ribonuclease genes that, together with mEAR-1 and mEAR-2 defined by Larson and colleagues (15), form an unusual cluster within the RNase A gene superfamily.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [murine]
<Options>: A: mus norvegicus (aka rattus norvegicus)
B: mus musculoides (mus musculoides enclavae) (aka mus musculoides)
C: mus <genus> (mice (aka mus <genus>))
D: house mouse (aka mus musculus)
E: peromyscus
F: None of the above. | [D] |
<Instruct>: Given the context 'The six genes within this cluster have varying amino acid sequence homologies to one another, but are clearly more closely related to one another than to either murine pancreatic ribonuclease (mPR) or angiogenin (mANG), or to any of the human ribonucleases of the RNase A family.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [murine; human]
<Options>: A: mus norvegicus (aka rattus norvegicus)
B: primate (aka primates)
C: mus musculoides (mus musculoides enclavae) (aka mus musculoides)
D: this
E: human (aka homo sapiens)
F: genus
G: mus sp. (mice (aka mus sp.))
H: species
I: mouse (aka mus <genus>)
J: mouse (aka mus musculus)
K: None of the above. | [J; E] |
<Instruct>: Given the context 'The six genes within this cluster have varying amino acid sequence homologies to one another, but are clearly more closely related to one another than to either murine pancreatic ribonuclease (mPR) or angiogenin (mANG), or to any of the human ribonucleases of the RNase A family.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [murine; human]
<Options>: A: mus (aka mus <subgenus>) (aka mus <subgenus>)
B: mus musculoides (mus musculoides enclavae) (aka mus musculoides)
C: suborder
D: mouse (aka mus musculus)
E: homo (humans) (aka homo)
F: mus cricetus (aka cricetus cricetus)
G: human (aka homo sapiens)
H: mus norvegicus (aka rattus norvegicus)
I: probles
J: cellular organisms (biota) (aka cellular organisms)
K: None of the above. | [D; G] |
<Instruct>: Given the context 'These results suggest that the `mR cluster' emerged via multiple duplications of a gene that had already diverged from those encoding the other murine ribonucleases.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [murine]
<Options>: A: mus (aka mus <subgenus>) (aka mus <subgenus>)
B: mus musculoides (mus musculoides enclavae) (aka mus musculoides)
C: eastern european house mouse (aka mus musculus musculus)
D: mus musculus (house mouse) (aka mus musculus)
E: mice (aka mus sp.) (aka mus sp.)
F: None of the above. | [D] |
<Instruct>: Given the context 'Although this type of expansion is unusual in this gene family, it is actually not unique; similar expansion has occurred in bovine species, with gene duplication resulting in the three closely-related bovine pancreatic, bovine brain (19,20) and bovine seminal (21) ribonucleases.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [bovine]
<Options>: A: bos (cattle) (aka bos)
B: bos bubalis bubalis (aka bubalus bubalis bubalis)
C: bos taurus x bos indicus (aka bos indicus x bos taurus)
D: bos taurus (bos primigenius taurus) (aka bos taurus)
E: bos indicus (bos primigenius indicus) (aka bos indicus)
F: None of the above. | [D] |
<Instruct>: Given the context 'One interesting feature of the mR cluster is that its relationship to any of to the six known human RNase A-type genes cannot be
4239 Nucleic Acids Research, 1997, Vol. 25, No.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [human]
<Options>: A: genus
B: placental mammals (aka eutheria)
C: primate (aka primates)
D: homo sapiens (human) (aka homo sapiens)
E: animals (aka metazoa)
F: None of the above. | [D] |
<Instruct>: Given the context 'One interesting feature of the mR cluster is that its relationship to any of to the six known human RNase A-type genes cannot be
4239 Nucleic Acids Research, 1997, Vol. 25, No.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [human]
<Options>: A: primate (aka primates)
B: genus
C: placental mammals (aka eutheria)
D: animals (aka metazoa)
E: None of the above. | [E] |
<Instruct>: Given the context 'Although the amino acid sequences encoded by mEAR-1 and mEAR-2 match those of tryptic peptides derived from murine eosinophil proteins (15), the homology data do not stand in overwhelming support of a unique relationship between any of the mR cluster ribonucleases and the human eosinophil ribonucleases EDN and ECP.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [murine; human]
<Options>: A: kingdom
B: mice (aka mus sp.) (aka mus sp.)
C: mus musculoides (mus musculoides enclavae) (aka mus musculoides)
D: placental mammals (aka eutheria)
E: house mouse (aka mus musculus)
F: human (aka homo sapiens)
G: peromyscus
H: mus norvegicus (aka rattus norvegicus)
I: cellular organisms (biota) (aka cellular organisms)
J: this
K: None of the above. | [E; F] |
<Instruct>: Given the context 'Although the amino acid sequences encoded by mEAR-1 and mEAR-2 match those of tryptic peptides derived from murine eosinophil proteins (15), the homology data do not stand in overwhelming support of a unique relationship between any of the mR cluster ribonucleases and the human eosinophil ribonucleases EDN and ECP.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [murine; human]
<Options>: A: mus (aka mus <subgenus>) (aka mus <subgenus>)
B: species
C: genus
D: eastern european house mouse (aka mus musculus musculus)
E: birds (aka aves)
F: mus norvegicus (aka rattus norvegicus)
G: macrobiotus sapiens
H: western european house mouse (aka mus musculus domesticus)
I: mus musculus (house mouse) (aka mus musculus)
J: human (aka homo sapiens)
K: None of the above. | [I; J] |
<Instruct>: Given the context 'The existence of an additional, as yet unidentified human ribonuclease (or ribonucleases) more closely related to those of the mR cluster cannot be ruled out.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [human]
<Options>: A: biota (aka cellular organisms)
B: human (aka homo sapiens)
C: mammals (aka mammalia)
D: placental mammals (aka eutheria)
E: kingdom
F: None of the above. | [B] |
<Instruct>: Given the context 'On this point, a number of studies have suggested a distinct role for the human ribonuclease ECP in eosinophil-mediated host defense (6,7); in addition, we have recently shown that eosinophil ribonucleases can inhibit retroviral transduction of human target cells (23).', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [human]
<Options>: A: birds (aka aves)
B: cellular organisms (biota) (aka cellular organisms)
C: macrobiotus sapiens
D: animals (aka metazoa)
E: homo sapiens (human) (aka homo sapiens)
F: None of the above. | [E] |
<Instruct>: Given the context 'Molecular polymorphism, differentiation and introgression in the period gene between Lutzomyia intermedia and Lutzomyia whitmani
Abstract
Background
Lutzomyia intermedia and Lutzomyia whitmani (Diptera: Psychodidae) are important and very closely related vector species of cutaneous leishmaniasis in Brazil, which are distinguishable by a few morphological differences.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [lutzomyia intermedia; lutzomyia whitmani]
<Options>: A: lutzomyia intermedia (aka nyssomyia intermedia)
B: chionodes whitmanella
C: wolbachia endosymbiont of nyssomyia whitmani
D: leptonema intermedium
E: lutzomyia walkeri
F: miliusa intermedia
G: parolinia intermedia
H: metrosideros whitakeri
I: lutzomyia whitmani (aka nyssomyia whitmani)
J: leptophlebia intermedia
K: None of the above. | [A; I] |
<Instruct>: Given the context 'Molecular polymorphism, differentiation and introgression in the period gene between Lutzomyia intermedia and Lutzomyia whitmani
Abstract
Background
Lutzomyia intermedia and Lutzomyia whitmani (Diptera: Psychodidae) are important and very closely related vector species of cutaneous leishmaniasis in Brazil, which are distinguishable by a few morphological differences.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [lutzomyia intermedia; lutzomyia whitmani]
<Options>: A: somalicharmus whitmanae
B: leptogramma intermedia
C: nyssomyia whitmani (flebotomus whitmani) (aka nyssomyia whitmani)
D: lutzomyia intermedia (aka nyssomyia intermedia)
E: mancinella intermedia
F: geobdella whitmani (aka chtonobdella whitmani)
G: diatrype whitmanensis
H: harttiella intermedia
I: enerthenema intermedium
J: sonerila whittyi
K: None of the above. | [D; C] |
<Instruct>: Given the context 'Molecular polymorphism, differentiation and introgression in the period gene between Lutzomyia intermedia and Lutzomyia whitmani
Abstract
Background
Lutzomyia intermedia and Lutzomyia whitmani (Diptera: Psychodidae) are important and very closely related vector species of cutaneous leishmaniasis in Brazil, which are distinguishable by a few morphological differences.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [lutzomyia intermedia; lutzomyia whitmani]
<Options>: A: leptogramma intermedia
B: sonerila whittyi
C: geobdella whitmani (aka chtonobdella whitmani)
D: somalicharmus whitmanae
E: diatrype whitmanensis
F: mancinella intermedia
G: harttiella intermedia
H: lutzomyia intermedia (aka nyssomyia intermedia)
I: enerthenema intermedium
J: None of the above. | [H; J] |
<Instruct>: Given the context 'Conclusion
Introgression might be occurring between L. intermedia and L. whitmani in period, a gene controlling behavioral rhythms in Drosophila.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [l. intermedia; l. whitmani]
<Options>: A: leptonema intermedium
B: molpadia intermedia (trochostoma intermedium) (aka molpadia intermedia)
C: calamus whitmorei
D: lutzomyia intermedia (aka nyssomyia intermedia)
E: bacterium whitmori (aka burkholderia pseudomallei)
F: mancinella intermedia
G: somalicharmus whitmanae
H: lutzomyia whitmani (aka nyssomyia whitmani)
I: leishmania mexicana amazonensis (aka leishmania amazonensis)
J: lemmaphyllum intermedium (lepidogrammitis intermedia) (aka lemmaphyllum intermedium)
K: None of the above. | [D; H] |
<Instruct>: Given the context 'Conclusion
Introgression might be occurring between L. intermedia and L. whitmani in period, a gene controlling behavioral rhythms in Drosophila.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [l. intermedia; l. whitmani]
<Options>: A: vellozia intermedia
B: somalicharmus whitmanae
C: nyssomyia intermedia (lutzomyia (nyssomyia) intermedia) (aka nyssomyia intermedia)
D: molpadia intermedia (trochostoma intermedium) (aka molpadia intermedia)
E: egernia whitii (aka liopholis whitii)
F: leishmania mexicana venezuelensis (leishmania (leishmania) venezuelensis) (aka leishmania mexicana venezuelensis)
G: lutzomyia whitmani (aka nyssomyia whitmani)
H: oldenburgia intermedia
I: geobdella whitmani (aka chtonobdella whitmani)
J: quadrula intermedia (aka theliderma intermedia)
K: None of the above. | [C; G] |
<Instruct>: Given the context 'Background
The Phlebotominae sand flies Lutzomyia intermedia Lutz & Neiva 1912 and Lutzomyia whitmani Antunes & Coutinho 1912 are vectors of cutaneous leishmaniasis in Brazil.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [lutzomyia intermedia; lutzomyia whitmani]
<Options>: A: chtonobdella whitmani (geobdella whitmani) (aka chtonobdella whitmani)
B: nyssomyia intermedia (lutzomyia (nyssomyia) intermedia) (aka nyssomyia intermedia)
C: harttiella intermedia
D: leptogramma intermedia
E: enerthenema intermedium
F: plagiostomum whitmani
G: metrosideros whitakeri
H: chionodes whitmanella
I: jungermannia intermedia (aka frullania intermedia)
J: nyssomyia whitmani (flebotomus whitmani) (aka nyssomyia whitmani)
K: None of the above. | [B; J] |
<Instruct>: Given the context 'Background
The Phlebotominae sand flies Lutzomyia intermedia Lutz & Neiva 1912 and Lutzomyia whitmani Antunes & Coutinho 1912 are vectors of cutaneous leishmaniasis in Brazil.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [lutzomyia intermedia; lutzomyia whitmani]
<Options>: A: metrosideros whitakeri
B: orobdella whitmani
C: egernia whitii (aka liopholis whitii)
D: miliusa intermedia
E: bavayia whitakeri
F: nyssomyia whitmani (flebotomus whitmani) (aka nyssomyia whitmani)
G: lutzomyia (nyssomyia) intermedia (aka nyssomyia intermedia)
H: berzelia intermedia
I: harttiella intermedia
J: parolinia intermedia
K: None of the above. | [G; F] |
<Instruct>: Given the context 'This was particularly interesting because apparently, only lineages of L. whitmani sympatric with L. intermedia have been involved in cutaneous leishmaniasis transmission in the peridomestic environment', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [l. whitmani; l. intermedia]
<Options>: A: harttiella intermedia
B: oldenburgia intermedia
C: orobdella whitmani
D: phlebotomus intermedius (aka nyssomyia intermedia)
E: chionodes whitmanella
F: raja whitleyi (aka dipturus whitleyi)
G: bacterium whitmori (aka burkholderia pseudomallei)
H: lutzomyia whitmani (aka nyssomyia whitmani)
I: molpadia intermedia (trochostoma intermedium) (aka molpadia intermedia)
J: lestrolepis intermedia (lestidium intermedium) (aka lestrolepis intermedia)
K: None of the above. | [H; D] |
<Instruct>: Given the context 'This was particularly interesting because apparently, only lineages of L. whitmani sympatric with L. intermedia have been involved in cutaneous leishmaniasis transmission in the peridomestic environment', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [l. whitmani; l. intermedia]
<Options>: A: harttiella intermedia
B: lutzomyia whitmani (aka nyssomyia whitmani)
C: raja whitleyi (aka dipturus whitleyi)
D: chionodes whitmanella
E: bacterium whitmori (aka burkholderia pseudomallei)
F: lestrolepis intermedia (lestidium intermedium) (aka lestrolepis intermedia)
G: molpadia intermedia (trochostoma intermedium) (aka molpadia intermedia)
H: orobdella whitmani
I: oldenburgia intermedia
J: None of the above. | [B; J] |
<Instruct>: Given the context 'This was particularly interesting because apparently, only lineages of L. whitmani sympatric with L. intermedia have been involved in cutaneous leishmaniasis transmission in the peridomestic environment', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [l. whitmani; l. intermedia]
<Options>: A: chionodes whitmanella
B: chtonobdella whitmani (geobdella whitmani) (aka chtonobdella whitmani)
C: egernia whitii (aka liopholis whitii)
D: flebotomus whitmani (aka nyssomyia whitmani)
E: mancinella intermedia
F: phlebotomus intermedius (aka nyssomyia intermedia)
G: hilara intermedia (empis intermedia) (aka hilara intermedia)
H: molpadia intermedia (trochostoma intermedium) (aka molpadia intermedia)
I: somalicharmus whitmanae
J: lactobacillus intermedius ('lactobacillus intermedius') (aka lactobacillus intermedius)
K: None of the above. | [D; F] |
<Instruct>: Given the context 'This circadian clock gene was originally identified using mutagenesis by Konopka and Benzer [11], but is also known to control the differences in the "lovesong" rhythms between D. melanogaster and D. simulans', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [d. melanogaster; d. simulans]
<Options>: A: melanogaster <basidiomycete fungi> (melanogaster) (aka melanogaster <basidiomycete fungi>)
B: dipodomys simulans simulans
C: drosophila simulans
D: melanogaster group
E: drosophila melanogaster (sophophora melanogaster) (aka drosophila melanogaster)
F: drosophila (aka drosophila <flies,subgenus>)
G: parasteatoda simulans
H: flies (aka diptera)
I: crassula simulans
J: None of the above. | [E; C] |
<Instruct>: Given the context 'This circadian clock gene was originally identified using mutagenesis by Konopka and Benzer [11], but is also known to control the differences in the "lovesong" rhythms between D. melanogaster and D. simulans', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [d. melanogaster; d. simulans]
<Options>: A: drosophila <flies,genus> (fruit flies) (aka drosophila <flies,genus>)
B: drosophila melanogaster (sophophora melanogaster) (aka drosophila melanogaster)
C: melanogaster <flies> (melanogaster) (aka melanogaster <flies>)
D: gnamptogenys simulans (aka alfaria simulans)
E: drosophila <basidiomycete fungi> (drosophila) (aka drosophila <basidiomycete fungi>)
F: drosophila simulans
G: drosophila melanogaster x drosophila simulans
H: hawaiian drosophila
I: melanogaster <basidiomycete fungi> (melanogaster) (aka melanogaster <basidiomycete fungi>)
J: None of the above. | [B; F] |
<Instruct>: Given the context 'per is thus a particularly interesting marker, among the few available, for an introgression analysis in L. intermedia and L. whitmani.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [l. intermedia; l. whitmani]
<Options>: A: molpadia intermedia (trochostoma intermedium) (aka molpadia intermedia)
B: vellozia intermedia
C: nyssomyia intermedia (lutzomyia (nyssomyia) intermedia) (aka nyssomyia intermedia)
D: lutzomyia whitmani (aka nyssomyia whitmani)
E: chtonobdella whitmani (geobdella whitmani) (aka chtonobdella whitmani)
F: 'lactobacillus intermedius' (aka lactobacillus intermedius)
G: leptophlebia intermedia
H: bacterium whitmori (aka burkholderia pseudomallei)
I: leishmania killicki
J: chionodes whitmanella
K: None of the above. | [C; D] |
<Instruct>: Given the context 'per is thus a particularly interesting marker, among the few available, for an introgression analysis in L. intermedia and L. whitmani.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [l. intermedia; l. whitmani]
<Options>: A: leishmania mexicana venezuelensis (leishmania (leishmania) venezuelensis) (aka leishmania mexicana venezuelensis)
B: leishmania killicki
C: harttiella intermedia
D: 'lactobacillus intermedius' (aka lactobacillus intermedius)
E: leptonema intermedium
F: lepidogrammitis intermedia (aka lemmaphyllum intermedium)
G: lutzomyia whitmani (aka nyssomyia whitmani)
H: plagiostomum whitmani
I: egernia whitii (aka liopholis whitii)
J: lutzomyia intermedia (aka nyssomyia intermedia)
K: None of the above. | [J; G] |
<Instruct>: Given the context 'per is thus a particularly interesting marker, among the few available, for an introgression analysis in L. intermedia and L. whitmani.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [l. intermedia; l. whitmani]
<Options>: A: lepidogrammitis intermedia (aka lemmaphyllum intermedium)
B: 'lactobacillus intermedius' (aka lactobacillus intermedius)
C: plagiostomum whitmani
D: leishmania mexicana venezuelensis (leishmania (leishmania) venezuelensis) (aka leishmania mexicana venezuelensis)
E: egernia whitii (aka liopholis whitii)
F: harttiella intermedia
G: leishmania killicki
H: leptonema intermedium
I: lutzomyia intermedia (aka nyssomyia intermedia)
J: None of the above. | [I; J] |
<Instruct>: Given the context 'In the current study, we analyzed the molecular variation within the per gene of L. intermedia and L. whitmani in five different localities in Eastern Brazil.
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [l. intermedia; l. whitmani]
<Options>: A: lestrolepis intermedia (lestidium intermedium) (aka lestrolepis intermedia)
B: leishmania killicki
C: nyssomyia whitmani (flebotomus whitmani) (aka nyssomyia whitmani)
D: spiniraja whitleyi (aka dipturus whitleyi)
E: plagiostomum whitmani
F: hilara intermedia (empis intermedia) (aka hilara intermedia)
G: phlebotomus intermedius (aka nyssomyia intermedia)
H: bacterium whitmori (aka burkholderia pseudomallei)
I: 'lactobacillus intermedius' (aka lactobacillus intermedius)
J: lemmaphyllum intermedium (lepidogrammitis intermedia) (aka lemmaphyllum intermedium)
K: None of the above. | [G; C] |
<Instruct>: Given the context 'In the current study, we analyzed the molecular variation within the per gene of L. intermedia and L. whitmani in five different localities in Eastern Brazil.
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [l. intermedia; l. whitmani]
<Options>: A: bacterium whitmori (aka burkholderia pseudomallei)
B: phlebotomus intermedius (aka nyssomyia intermedia)
C: pouteria whitmorei (aka planchonella whitmorei)
D: harttiella intermedia
E: flebotomus whitmani (aka nyssomyia whitmani)
F: mancinella intermedia
G: geobdella whitmani (aka chtonobdella whitmani)
H: leptonema intermedium
I: leishmania mexicana venezuelensis (leishmania (leishmania) venezuelensis) (aka leishmania mexicana venezuelensis)
J: lepidogrammitis intermedia (aka lemmaphyllum intermedium)
K: None of the above. | [B; E] |
<Instruct>: Given the context 'Results
Polymorphism and divergence between L. intermedia and L. whitmani
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [l. intermedia; l. whitmani]
<Options>: A: dipturus whitleyi (spiniraja whitleyi) (aka dipturus whitleyi)
B: phlebotomus intermedius (aka nyssomyia intermedia)
C: harttiella intermedia
D: hilara intermedia (empis intermedia) (aka hilara intermedia)
E: mancinella intermedia
F: typhlopsylla intermedia (aka adoratopsylla intermedia)
G: leishmania killicki
H: somalicharmus whitmanae
I: lutzomyia whitmani (aka nyssomyia whitmani)
J: bacterium whitmori (aka burkholderia pseudomallei)
K: None of the above. | [B; I] |
<Instruct>: Given the context 'Results
Polymorphism and divergence between L. intermedia and L. whitmani
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [l. intermedia; l. whitmani]
<Options>: A: somalicharmus whitmanae
B: 'lactobacillus intermedius' (aka lactobacillus intermedius)
C: flebotomus whitmani (aka nyssomyia whitmani)
D: chtonobdella whitmani (geobdella whitmani) (aka chtonobdella whitmani)
E: licuala intermedia
F: oldenburgia intermedia
G: chionodes whitmanella
H: phlebotomus intermedius (aka nyssomyia intermedia)
I: harttiella intermedia
J: calamus whitmorei
K: None of the above. | [H; C] |
<Instruct>: Given the context 'A total of 68 sequences from L. intermedia and 53 from L. whitmani homologue to a fragment of the period gene were analyzed from populations of five localities in Eastern Brazil (Fig 1).', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [l. intermedia; l. whitmani]
<Options>: A: oldenburgia intermedia
B: raja whitleyi (aka dipturus whitleyi)
C: geobdella whitmani (aka chtonobdella whitmani)
D: somalicharmus whitmanae
E: nyssomyia whitmani (flebotomus whitmani) (aka nyssomyia whitmani)
F: harttiella intermedia
G: leptophlebia intermedia
H: hilara intermedia (empis intermedia) (aka hilara intermedia)
I: lutzomyia (nyssomyia) intermedia (aka nyssomyia intermedia)
J: leishmania mexicana venezuelensis (leishmania (leishmania) venezuelensis) (aka leishmania mexicana venezuelensis)
K: None of the above. | [I; E] |
<Instruct>: Given the context 'A total of 68 sequences from L. intermedia and 53 from L. whitmani homologue to a fragment of the period gene were analyzed from populations of five localities in Eastern Brazil (Fig 1).', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [l. intermedia; l. whitmani]
<Options>: A: geobdella whitmani (aka chtonobdella whitmani)
B: somalicharmus whitmanae
C: lutzomyia (nyssomyia) intermedia (aka nyssomyia intermedia)
D: oldenburgia intermedia
E: raja whitleyi (aka dipturus whitleyi)
F: leishmania mexicana venezuelensis (leishmania (leishmania) venezuelensis) (aka leishmania mexicana venezuelensis)
G: hilara intermedia (empis intermedia) (aka hilara intermedia)
H: harttiella intermedia
I: leptophlebia intermedia
J: None of the above. | [C; J] |
<Instruct>: Given the context 'A total of 68 sequences from L. intermedia and 53 from L. whitmani homologue to a fragment of the period gene were analyzed from populations of five localities in Eastern Brazil (Fig 1).', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [l. intermedia; l. whitmani]
<Options>: A: lemmaphyllum intermedium (lepidogrammitis intermedia) (aka lemmaphyllum intermedium)
B: leptophlebia intermedia
C: typhlopsylla intermedia (aka adoratopsylla intermedia)
D: lutzomyia whitmani (aka nyssomyia whitmani)
E: plagiostomum whitmani
F: planchonella whitmorei (pouteria whitmorei) (aka planchonella whitmorei)
G: oldenburgia intermedia
H: leishmania killicki
I: leishmania mexicana amazonensis (aka leishmania amazonensis)
J: nyssomyia intermedia (lutzomyia (nyssomyia) intermedia) (aka nyssomyia intermedia)
K: None of the above. | [J; D] |
<Instruct>: Given the context 'Within each species, all populations present similar levels of polymorphism with the exception of L. whitmani from Ilhéus, which seems to be less polymorphic than the others.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [l. whitmani]
<Options>: A: chtonobdella whitmani (geobdella whitmani) (aka chtonobdella whitmani)
B: leishmania killicki
C: plagiostomum whitmani
D: lutzomyia whitmani (aka nyssomyia whitmani)
E: bacterium whitmori (aka burkholderia pseudomallei)
F: None of the above. | [D] |
<Instruct>: Given the context 'Table 3 shows a more detailed analysis of the intraspecific differentiation among populations of L. intermedia and L. whitmani.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [l. intermedia; l. whitmani]
<Options>: A: mancinella intermedia
B: pouteria whitmorei (aka planchonella whitmorei)
C: nyssomyia intermedia (lutzomyia (nyssomyia) intermedia) (aka nyssomyia intermedia)
D: oldenburgia intermedia
E: leptophlebia intermedia
F: nyssomyia whitmani (flebotomus whitmani) (aka nyssomyia whitmani)
G: chionodes whitmanella
H: hilara intermedia (empis intermedia) (aka hilara intermedia)
I: bacterium whitmori (aka burkholderia pseudomallei)
J: leishmania mexicana venezuelensis (leishmania (leishmania) venezuelensis) (aka leishmania mexicana venezuelensis)
K: None of the above. | [C; F] |
<Instruct>: Given the context 'Table 3 shows a more detailed analysis of the intraspecific differentiation among populations of L. intermedia and L. whitmani.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [l. intermedia; l. whitmani]
<Options>: A: bacterium whitmori (aka burkholderia pseudomallei)
B: licuala intermedia
C: lutzomyia intermedia (aka nyssomyia intermedia)
D: pouteria whitmorei (aka planchonella whitmorei)
E: oldenburgia intermedia
F: egernia whitii (aka liopholis whitii)
G: nyssomyia whitmani (flebotomus whitmani) (aka nyssomyia whitmani)
H: typhlopsylla intermedia (aka adoratopsylla intermedia)
I: dipturus whitleyi (spiniraja whitleyi) (aka dipturus whitleyi)
J: vellozia intermedia
K: None of the above. | [C; G] |
<Instruct>: Given the context 'None of the pairwise and overall fixation indexes (Fst) are significant in the case of L. intermedia and only one (Posse × Ilhéus) has a borderline significant value in L. whitmani.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [l. intermedia; l. whitmani]
<Options>: A: chtonobdella whitmani (geobdella whitmani) (aka chtonobdella whitmani)
B: flebotomus whitmani (aka nyssomyia whitmani)
C: quadrula intermedia (aka theliderma intermedia)
D: calamus whitmorei
E: licuala intermedia
F: phlebotomus intermedius (aka nyssomyia intermedia)
G: egernia whitii (aka liopholis whitii)
H: leishmania killicki
I: 'lactobacillus intermedius' (aka lactobacillus intermedius)
J: lemmaphyllum intermedium (lepidogrammitis intermedia) (aka lemmaphyllum intermedium)
K: None of the above. | [F; B] |
<Instruct>: Given the context 'None of the pairwise and overall fixation indexes (Fst) are significant in the case of L. intermedia and only one (Posse × Ilhéus) has a borderline significant value in L. whitmani.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [l. intermedia; l. whitmani]
<Options>: A: oldenburgia intermedia
B: lestrolepis intermedia (lestidium intermedium) (aka lestrolepis intermedia)
C: mancinella intermedia
D: nyssomyia intermedia (lutzomyia (nyssomyia) intermedia) (aka nyssomyia intermedia)
E: egernia whitii (aka liopholis whitii)
F: somalicharmus whitmanae
G: flebotomus whitmani (aka nyssomyia whitmani)
H: quadrula intermedia (aka theliderma intermedia)
I: leishmania mexicana amazonensis (aka leishmania amazonensis)
J: geobdella whitmani (aka chtonobdella whitmani)
K: None of the above. | [D; G] |
<Instruct>: Given the context 'The estimated number of migrants per generation, based on the overall Fst values, is 20.683 for L. intermedia and 23.125 for L. whitmani.
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [l. intermedia; l. whitmani]
<Options>: A: dipturus whitleyi (spiniraja whitleyi) (aka dipturus whitleyi)
B: vellozia intermedia
C: bacterium whitmori (aka burkholderia pseudomallei)
D: lepidogrammitis intermedia (aka lemmaphyllum intermedium)
E: lutzomyia intermedia (aka nyssomyia intermedia)
F: chionodes whitmanella
G: leishmania mexicana amazonensis (aka leishmania amazonensis)
H: hilara intermedia (empis intermedia) (aka hilara intermedia)
I: nyssomyia whitmani (flebotomus whitmani) (aka nyssomyia whitmani)
J: typhlopsylla intermedia (aka adoratopsylla intermedia)
K: None of the above. | [E; I] |
<Instruct>: Given the context 'The estimated number of migrants per generation, based on the overall Fst values, is 20.683 for L. intermedia and 23.125 for L. whitmani.
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [l. intermedia; l. whitmani]
<Options>: A: plagiostomum whitmani
B: lutzomyia intermedia (aka nyssomyia intermedia)
C: lactobacillus intermedius ('lactobacillus intermedius') (aka lactobacillus intermedius)
D: somalicharmus whitmanae
E: dipturus whitleyi (spiniraja whitleyi) (aka dipturus whitleyi)
F: harttiella intermedia
G: lemmaphyllum intermedium (lepidogrammitis intermedia) (aka lemmaphyllum intermedium)
H: typhlopsylla intermedia (aka adoratopsylla intermedia)
I: lutzomyia whitmani (aka nyssomyia whitmani)
J: bacterium whitmori (aka burkholderia pseudomallei)
K: None of the above. | [B; I] |
<Instruct>: Given the context 'In fact, there is one shared haplotype between the two species (IPO13, WPO10 and WPO19) and three L. whitmani sequences (WAC02, WPO13 and WPO14) which show only one nucleotide difference to "typical" L. intermedia haplotypes (see also below).
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [l. whitmani; l. intermedia]
<Options>: A: phlebotomus intermedius (aka nyssomyia intermedia)
B: nyssomyia whitmani (flebotomus whitmani) (aka nyssomyia whitmani)
C: lestrolepis intermedia (lestidium intermedium) (aka lestrolepis intermedia)
D: chionodes whitmanella
E: 'lactobacillus intermedius' (aka lactobacillus intermedius)
F: leishmania mexicana amazonensis (aka leishmania amazonensis)
G: leptophlebia intermedia
H: somalicharmus whitmanae
I: hilara intermedia (empis intermedia) (aka hilara intermedia)
J: leishmania killicki
K: None of the above. | [B; A] |
<Instruct>: Given the context 'In fact, there is one shared haplotype between the two species (IPO13, WPO10 and WPO19) and three L. whitmani sequences (WAC02, WPO13 and WPO14) which show only one nucleotide difference to "typical" L. intermedia haplotypes (see also below).
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [l. whitmani; l. intermedia]
<Options>: A: lutzomyia (nyssomyia) intermedia (aka nyssomyia intermedia)
B: lutzomyia whitmani (aka nyssomyia whitmani)
C: lepidogrammitis intermedia (aka lemmaphyllum intermedium)
D: leishmania killicki
E: bacterium whitmori (aka burkholderia pseudomallei)
F: geobdella whitmani (aka chtonobdella whitmani)
G: leptonema intermedium
H: plagiostomum whitmani
I: 'lactobacillus intermedius' (aka lactobacillus intermedius)
J: licuala intermedia
K: None of the above. | [B; A] |
<Instruct>: Given the context 'Genealogy of period sequences
A phylogenetic analysis of the period gene sequences from L. intermedia and L. whitmani was carried out with the Minimum Evolution method using the Kimura 2-parameter distance (Fig 3).', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [l. intermedia; l. whitmani]
<Options>: A: hilara intermedia (empis intermedia) (aka hilara intermedia)
B: mancinella intermedia
C: licuala intermedia
D: plagiostomum whitmani
E: leishmania mexicana venezuelensis (leishmania (leishmania) venezuelensis) (aka leishmania mexicana venezuelensis)
F: flebotomus whitmani (aka nyssomyia whitmani)
G: somalicharmus whitmanae
H: phlebotomus intermedius (aka nyssomyia intermedia)
I: planchonella whitmorei (pouteria whitmorei) (aka planchonella whitmorei)
J: harttiella intermedia
K: None of the above. | [H; F] |
<Instruct>: Given the context 'Genealogy of period sequences
A phylogenetic analysis of the period gene sequences from L. intermedia and L. whitmani was carried out with the Minimum Evolution method using the Kimura 2-parameter distance (Fig 3).', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [l. intermedia; l. whitmani]
<Options>: A: leptonema intermedium
B: geobdella whitmani (aka chtonobdella whitmani)
C: egernia whitii (aka liopholis whitii)
D: orobdella whitmani
E: nyssomyia whitmani (flebotomus whitmani) (aka nyssomyia whitmani)
F: vellozia intermedia
G: lutzomyia intermedia (aka nyssomyia intermedia)
H: quadrula intermedia (aka theliderma intermedia)
I: typhlopsylla intermedia (aka adoratopsylla intermedia)
J: leishmania mexicana amazonensis (aka leishmania amazonensis)
K: None of the above. | [G; E] |
<Instruct>: Given the context 'A sequence from L. umbratilis, a related species from the same subgenus Nyssomyia, was used as outgroup [24].', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [l. umbratilis]
<Options>: A: labroma umbratilis
B: aporus (neoplaniceps) umbratilis (aka aporus umbratilis)
C: rhinomyias umbratilis
D: nesophrosyne umbratilis
E: lutzomyia (nyssomyia) umbratilis (aka nyssomyia umbratilis)
F: None of the above. | [E] |
<Instruct>: Given the context 'The tree shows L. intermedia and L. whitmani as non-monophyletic.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [l. intermedia; l. whitmani]
<Options>: A: leishmania mexicana venezuelensis (leishmania (leishmania) venezuelensis) (aka leishmania mexicana venezuelensis)
B: licuala intermedia
C: leishmania mexicana amazonensis (aka leishmania amazonensis)
D: oldenburgia intermedia
E: geobdella whitmani (aka chtonobdella whitmani)
F: pouteria whitmorei (aka planchonella whitmorei)
G: lestrolepis intermedia (lestidium intermedium) (aka lestrolepis intermedia)
H: lutzomyia intermedia (aka nyssomyia intermedia)
I: lutzomyia whitmani (aka nyssomyia whitmani)
J: leptonema intermedium
K: None of the above. | [H; I] |
<Instruct>: Given the context 'The tree shows L. intermedia and L. whitmani as non-monophyletic.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [l. intermedia; l. whitmani]
<Options>: A: quadrula intermedia (aka theliderma intermedia)
B: lemmaphyllum intermedium (lepidogrammitis intermedia) (aka lemmaphyllum intermedium)
C: licuala intermedia
D: harttiella intermedia
E: nyssomyia whitmani (flebotomus whitmani) (aka nyssomyia whitmani)
F: bacterium whitmori (aka burkholderia pseudomallei)
G: egernia whitii (aka liopholis whitii)
H: leishmania killicki
I: calamus whitmorei
J: phlebotomus intermedius (aka nyssomyia intermedia)
K: None of the above. | [J; E] |
<Instruct>: Given the context 'However, despite the low bootstrap values, which are below 50% in most cases, there is a large group that contains most L. intermedia sequences and a second large group with most L. whitmani sequences.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [l. intermedia; l. whitmani]
<Options>: A: licuala intermedia
B: leptonema intermedium
C: lutzomyia (nyssomyia) intermedia (aka nyssomyia intermedia)
D: leishmania killicki
E: calamus whitmorei
F: plagiostomum whitmani
G: vellozia intermedia
H: molpadia intermedia (trochostoma intermedium) (aka molpadia intermedia)
I: nyssomyia whitmani (flebotomus whitmani) (aka nyssomyia whitmani)
J: dipturus whitleyi (spiniraja whitleyi) (aka dipturus whitleyi)
K: None of the above. | [C; I] |
<Instruct>: Given the context 'However, despite the low bootstrap values, which are below 50% in most cases, there is a large group that contains most L. intermedia sequences and a second large group with most L. whitmani sequences.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [l. intermedia; l. whitmani]
<Options>: A: calamus whitmorei
B: molpadia intermedia (trochostoma intermedium) (aka molpadia intermedia)
C: vellozia intermedia
D: lutzomyia (nyssomyia) intermedia (aka nyssomyia intermedia)
E: plagiostomum whitmani
F: leishmania killicki
G: licuala intermedia
H: leptonema intermedium
I: dipturus whitleyi (spiniraja whitleyi) (aka dipturus whitleyi)
J: None of the above. | [D; J] |
<Instruct>: Given the context 'However, despite the low bootstrap values, which are below 50% in most cases, there is a large group that contains most L. intermedia sequences and a second large group with most L. whitmani sequences.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [l. intermedia; l. whitmani]
<Options>: A: lutzomyia (nyssomyia) intermedia (aka nyssomyia intermedia)
B: orobdella whitmani
C: lutzomyia whitmani (aka nyssomyia whitmani)
D: mancinella intermedia
E: oldenburgia intermedia
F: leishmania mexicana amazonensis (aka leishmania amazonensis)
G: leishmania killicki
H: lemmaphyllum intermedium (lepidogrammitis intermedia) (aka lemmaphyllum intermedium)
I: molpadia intermedia (trochostoma intermedium) (aka molpadia intermedia)
J: plagiostomum whitmani
K: None of the above. | [A; C] |
<Instruct>: Given the context 'It is interesting to note that there are three L. whitmani alleles (WAC2, WPO13 and WPO14) inside L. intermedia main group, as well as one L. intermedia allele (ICP16) inside the L. whitmani main group.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [l. whitmani; l. intermedia]
<Options>: A: leishmania mexicana amazonensis (aka leishmania amazonensis)
B: vellozia intermedia
C: quadrula intermedia (aka theliderma intermedia)
D: phlebotomus intermedius (aka nyssomyia intermedia)
E: lutzomyia whitmani (aka nyssomyia whitmani)
F: molpadia intermedia (trochostoma intermedium) (aka molpadia intermedia)
G: calamus whitmorei
H: egernia whitii (aka liopholis whitii)
I: plagiostomum whitmani
J: lepidogrammitis intermedia (aka lemmaphyllum intermedium)
K: None of the above. | [E; D] |
<Instruct>: Given the context 'It is interesting to note that there are three L. whitmani alleles (WAC2, WPO13 and WPO14) inside L. intermedia main group, as well as one L. intermedia allele (ICP16) inside the L. whitmani main group.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [l. whitmani; l. intermedia]
<Options>: A: lutzomyia whitmani (aka nyssomyia whitmani)
B: leishmania killicki
C: lepidogrammitis intermedia (aka lemmaphyllum intermedium)
D: phlebotomus intermedius (aka nyssomyia intermedia)
E: vellozia intermedia
F: bacterium whitmori (aka burkholderia pseudomallei)
G: leptophlebia intermedia
H: calamus whitmorei
I: molpadia intermedia (trochostoma intermedium) (aka molpadia intermedia)
J: leishmania mexicana venezuelensis (leishmania (leishmania) venezuelensis) (aka leishmania mexicana venezuelensis)
K: None of the above. | [A; D] |
<Instruct>: Given the context 'In addition, a second L. intermedia allele (IPO13) is a shared haplotype between the two species as mentioned above.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [l. intermedia]
<Options>: A: quadrula intermedia (aka theliderma intermedia)
B: lepidogrammitis intermedia (aka lemmaphyllum intermedium)
C: typhlopsylla intermedia (aka adoratopsylla intermedia)
D: hilara intermedia (empis intermedia) (aka hilara intermedia)
E: phlebotomus intermedius (aka nyssomyia intermedia)
F: None of the above. | [E] |
<Instruct>: Given the context 'We did not observed major changes in the genealogy of the L. intermedia and L. whitmani per sequences, especially regarding the five haplotypes (ICP16, IPO13, WAC2, WPO13 and WPO14) that clearly cluster with sequences of the other species (data not shown).
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [l. intermedia; l. whitmani]
<Options>: A: lutzomyia whitmani (aka nyssomyia whitmani)
B: harttiella intermedia
C: leptonema intermedium
D: lutzomyia intermedia (aka nyssomyia intermedia)
E: calamus whitmorei
F: bacterium whitmori (aka burkholderia pseudomallei)
G: licuala intermedia
H: orobdella whitmani
I: quadrula intermedia (aka theliderma intermedia)
J: raja whitleyi (aka dipturus whitleyi)
K: None of the above. | [D; A] |
<Instruct>: Given the context 'We did not observed major changes in the genealogy of the L. intermedia and L. whitmani per sequences, especially regarding the five haplotypes (ICP16, IPO13, WAC2, WPO13 and WPO14) that clearly cluster with sequences of the other species (data not shown).
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [l. intermedia; l. whitmani]
<Options>: A: chtonobdella whitmani (geobdella whitmani) (aka chtonobdella whitmani)
B: raja whitleyi (aka dipturus whitleyi)
C: flebotomus whitmani (aka nyssomyia whitmani)
D: somalicharmus whitmanae
E: molpadia intermedia (trochostoma intermedium) (aka molpadia intermedia)
F: leptonema intermedium
G: lutzomyia (nyssomyia) intermedia (aka nyssomyia intermedia)
H: chionodes whitmanella
I: mancinella intermedia
J: lemmaphyllum intermedium (lepidogrammitis intermedia) (aka lemmaphyllum intermedium)
K: None of the above. | [G; C] |
<Instruct>: Given the context 'The haplotype network shows connections between sequences from each species, separating most of the sequences of L. intermedia and L. whitmani in two groups.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [l. intermedia; l. whitmani]
<Options>: A: bacterium whitmori (aka burkholderia pseudomallei)
B: lutzomyia (nyssomyia) intermedia (aka nyssomyia intermedia)
C: leptophlebia intermedia
D: leishmania mexicana venezuelensis (leishmania (leishmania) venezuelensis) (aka leishmania mexicana venezuelensis)
E: hilara intermedia (empis intermedia) (aka hilara intermedia)
F: leishmania mexicana amazonensis (aka leishmania amazonensis)
G: calamus whitmorei
H: oldenburgia intermedia
I: licuala intermedia
J: nyssomyia whitmani (flebotomus whitmani) (aka nyssomyia whitmani)
K: None of the above. | [B; J] |
<Instruct>: Given the context 'The haplotype network shows connections between sequences from each species, separating most of the sequences of L. intermedia and L. whitmani in two groups.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [l. intermedia; l. whitmani]
<Options>: A: raja whitleyi (aka dipturus whitleyi)
B: pouteria whitmorei (aka planchonella whitmorei)
C: nyssomyia whitmani (flebotomus whitmani) (aka nyssomyia whitmani)
D: geobdella whitmani (aka chtonobdella whitmani)
E: quadrula intermedia (aka theliderma intermedia)
F: licuala intermedia
G: lepidogrammitis intermedia (aka lemmaphyllum intermedium)
H: lutzomyia (nyssomyia) intermedia (aka nyssomyia intermedia)
I: lactobacillus intermedius ('lactobacillus intermedius') (aka lactobacillus intermedius)
J: leishmania mexicana amazonensis (aka leishmania amazonensis)
K: None of the above. | [H; C] |
<Instruct>: Given the context 'Once again, some of the L. whitmani sequences (WAC2, WAC10, WPO13 and WPO14) appear more closely related to L. intermedia haplotypes.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [l. whitmani; l. intermedia]
<Options>: A: 'lactobacillus intermedius' (aka lactobacillus intermedius)
B: egernia whitii (aka liopholis whitii)
C: pouteria whitmorei (aka planchonella whitmorei)
D: leishmania killicki
E: lutzomyia intermedia (aka nyssomyia intermedia)
F: leptophlebia intermedia
G: somalicharmus whitmanae
H: lutzomyia whitmani (aka nyssomyia whitmani)
I: leptonema intermedium
J: oldenburgia intermedia
K: None of the above. | [H; E] |
<Instruct>: Given the context 'Once again, some of the L. whitmani sequences (WAC2, WAC10, WPO13 and WPO14) appear more closely related to L. intermedia haplotypes.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [l. whitmani; l. intermedia]
<Options>: A: leishmania killicki
B: calamus whitmorei
C: raja whitleyi (aka dipturus whitleyi)
D: somalicharmus whitmanae
E: lutzomyia whitmani (aka nyssomyia whitmani)
F: oldenburgia intermedia
G: lutzomyia (nyssomyia) intermedia (aka nyssomyia intermedia)
H: leptophlebia intermedia
I: 'lactobacillus intermedius' (aka lactobacillus intermedius)
J: harttiella intermedia
K: None of the above. | [E; G] |
<Instruct>: Given the context 'In addition, one L. intermedia allele (ICP16) is connected by a small number of mutations to some of the main L. whitmani haplotypes and IPO13 is a shared haplotype between the two species.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [l. intermedia; l. whitmani]
<Options>: A: leptophlebia intermedia
B: molpadia intermedia (trochostoma intermedium) (aka molpadia intermedia)
C: flebotomus whitmani (aka nyssomyia whitmani)
D: leishmania mexicana venezuelensis (leishmania (leishmania) venezuelensis) (aka leishmania mexicana venezuelensis)
E: quadrula intermedia (aka theliderma intermedia)
F: lutzomyia intermedia (aka nyssomyia intermedia)
G: hilara intermedia (empis intermedia) (aka hilara intermedia)
H: planchonella whitmorei (pouteria whitmorei) (aka planchonella whitmorei)
I: leishmania mexicana amazonensis (aka leishmania amazonensis)
J: egernia whitii (aka liopholis whitii)
K: None of the above. | [F; C] |
<Instruct>: Given the context 'In addition, one L. intermedia allele (ICP16) is connected by a small number of mutations to some of the main L. whitmani haplotypes and IPO13 is a shared haplotype between the two species.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [l. intermedia; l. whitmani]
<Options>: A: oldenburgia intermedia
B: mancinella intermedia
C: egernia whitii (aka liopholis whitii)
D: plagiostomum whitmani
E: leptophlebia intermedia
F: phlebotomus intermedius (aka nyssomyia intermedia)
G: somalicharmus whitmanae
H: lutzomyia whitmani (aka nyssomyia whitmani)
I: bacterium whitmori (aka burkholderia pseudomallei)
J: quadrula intermedia (aka theliderma intermedia)
K: None of the above. | [F; H] |
<Instruct>: Given the context 'LD test of introgression
We tested the hypothesis of gene flow between L. intermedia and L. whitmani using a method based on linkage disequilibrium (LD) developed by Machado et al.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [l. intermedia; l. whitmani]
<Options>: A: chionodes whitmanella
B: leishmania mexicana venezuelensis (leishmania (leishmania) venezuelensis) (aka leishmania mexicana venezuelensis)
C: lutzomyia (nyssomyia) intermedia (aka nyssomyia intermedia)
D: nyssomyia whitmani (flebotomus whitmani) (aka nyssomyia whitmani)
E: plagiostomum whitmani
F: calamus whitmorei
G: quadrula intermedia (aka theliderma intermedia)
H: lactobacillus intermedius ('lactobacillus intermedius') (aka lactobacillus intermedius)
I: leptophlebia intermedia
J: molpadia intermedia (trochostoma intermedium) (aka molpadia intermedia)
K: None of the above. | [C; D] |
<Instruct>: Given the context 'LD test of introgression
We tested the hypothesis of gene flow between L. intermedia and L. whitmani using a method based on linkage disequilibrium (LD) developed by Machado et al.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [l. intermedia; l. whitmani]
<Options>: A: chtonobdella whitmani (geobdella whitmani) (aka chtonobdella whitmani)
B: orobdella whitmani
C: flebotomus whitmani (aka nyssomyia whitmani)
D: harttiella intermedia
E: molpadia intermedia (trochostoma intermedium) (aka molpadia intermedia)
F: licuala intermedia
G: phlebotomus intermedius (aka nyssomyia intermedia)
H: calamus whitmorei
I: leishmania mexicana amazonensis (aka leishmania amazonensis)
J: hilara intermedia (empis intermedia) (aka hilara intermedia)
K: None of the above. | [G; C] |
<Instruct>: Given the context 'Therefore, we carried out the LD test of introgression between each pair of sympatric populations of L. intermedia and L. whitmani from the localities of Posse, Afonso Claudio and Corte de Pedra.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [l. intermedia; l. whitmani]
<Options>: A: plagiostomum whitmani
B: orobdella whitmani
C: spiniraja whitleyi (aka dipturus whitleyi)
D: lutzomyia intermedia (aka nyssomyia intermedia)
E: lestrolepis intermedia (lestidium intermedium) (aka lestrolepis intermedia)
F: typhlopsylla intermedia (aka adoratopsylla intermedia)
G: mancinella intermedia
H: oldenburgia intermedia
I: leishmania mexicana amazonensis (aka leishmania amazonensis)
J: nyssomyia whitmani (flebotomus whitmani) (aka nyssomyia whitmani)
K: None of the above. | [D; J] |
<Instruct>: Given the context 'Therefore, we carried out the LD test of introgression between each pair of sympatric populations of L. intermedia and L. whitmani from the localities of Posse, Afonso Claudio and Corte de Pedra.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [l. intermedia; l. whitmani]
<Options>: A: lutzomyia (nyssomyia) intermedia (aka nyssomyia intermedia)
B: quadrula intermedia (aka theliderma intermedia)
C: oldenburgia intermedia
D: calamus whitmorei
E: lutzomyia whitmani (aka nyssomyia whitmani)
F: leishmania killicki
G: orobdella whitmani
H: molpadia intermedia (trochostoma intermedium) (aka molpadia intermedia)
I: dipturus whitleyi (spiniraja whitleyi) (aka dipturus whitleyi)
J: mancinella intermedia
K: None of the above. | [A; E] |
<Instruct>: Given the context 'Although no significant values were found for the smaller samples of Afonso Claudio and Corte de Pedra, the results (Table 5) present evidence for introgression in the period gene in both directions (from L. intermedia to L. whitmani and vice-versa) in the locality of Posse.
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [l. intermedia; l. whitmani]
<Options>: A: quadrula intermedia (aka theliderma intermedia)
B: calamus whitmorei
C: nyssomyia whitmani (flebotomus whitmani) (aka nyssomyia whitmani)
D: lutzomyia (nyssomyia) intermedia (aka nyssomyia intermedia)
E: typhlopsylla intermedia (aka adoratopsylla intermedia)
F: egernia whitii (aka liopholis whitii)
G: orobdella whitmani
H: vellozia intermedia
I: geobdella whitmani (aka chtonobdella whitmani)
J: leptophlebia intermedia
K: None of the above. | [D; C] |
<Instruct>: Given the context 'Although no significant values were found for the smaller samples of Afonso Claudio and Corte de Pedra, the results (Table 5) present evidence for introgression in the period gene in both directions (from L. intermedia to L. whitmani and vice-versa) in the locality of Posse.
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [l. intermedia; l. whitmani]
<Options>: A: hilara intermedia (empis intermedia) (aka hilara intermedia)
B: chionodes whitmanella
C: leishmania mexicana venezuelensis (leishmania (leishmania) venezuelensis) (aka leishmania mexicana venezuelensis)
D: egernia whitii (aka liopholis whitii)
E: lutzomyia (nyssomyia) intermedia (aka nyssomyia intermedia)
F: mancinella intermedia
G: nyssomyia whitmani (flebotomus whitmani) (aka nyssomyia whitmani)
H: typhlopsylla intermedia (aka adoratopsylla intermedia)
I: lestrolepis intermedia (lestidium intermedium) (aka lestrolepis intermedia)
J: calamus whitmorei
K: None of the above. | [E; G] |
<Instruct>: Given the context 'Isolation with Migration model
To further examine the gene flow between L. intermedia and L. whitmani we used the IM software [39].', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [l. intermedia; l. whitmani]
<Options>: A: hilara intermedia (empis intermedia) (aka hilara intermedia)
B: licuala intermedia
C: vellozia intermedia
D: molpadia intermedia (trochostoma intermedium) (aka molpadia intermedia)
E: leishmania mexicana venezuelensis (leishmania (leishmania) venezuelensis) (aka leishmania mexicana venezuelensis)
F: leishmania killicki
G: chtonobdella whitmani (geobdella whitmani) (aka chtonobdella whitmani)
H: flebotomus whitmani (aka nyssomyia whitmani)
I: lutzomyia (nyssomyia) intermedia (aka nyssomyia intermedia)
J: chionodes whitmanella
K: None of the above. | [I; H] |
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