query stringlengths 53 100 | positive listlengths 1 5 | negative listlengths 1 4 | system stringlengths 68 790 |
|---|---|---|---|
What is the biomedical concept corresponding to 'greenhouse whitefly'? | [
"greenhouse whitefly (trialeurodes vaporariorum)"
] | [
"sweet potato whitefly (bemisia tabaci)",
"silverleaf whitefly (bemisia argentifolii)",
"white butterfly (pieris brassicae)",
"bemisia tabaci (sweet potato whitefly)"
] | Given the context 'Strains were tested for their infectivity against Cuban laurel thrips, Gynaikothrips uzeli Zimmerman (Thysanoptera: Phlaeothripidae) and the greenhouse whitefly, Trialeurodes vaporariorum (Westwood) (Hemiptera: Aleyrodidae).', answer the user's query. |
What is the biomedical concept corresponding to 'trialeurodes vaporariorum'? | [
"trialeurodes vaporariorum (greenhouse whitefly)",
"greenhouse whitefly (trialeurodes vaporariorum)"
] | [
"cymindis vaporariorum",
"xylaria vaporaria",
"primary endosymbiont of trialeurodes vaporariorum",
"trialeurodes vaporariorum bunya-like virus"
] | Given the context 'Strains were tested for their infectivity against Cuban laurel thrips, Gynaikothrips uzeli Zimmerman (Thysanoptera: Phlaeothripidae) and the greenhouse whitefly, Trialeurodes vaporariorum (Westwood) (Hemiptera: Aleyrodidae).', answer the user's query. |
What is the biomedical concept corresponding to 'b. bassiana'? | [
"botrytis bassiana (beauveria bassiana)",
"beauveria bassiana (beauveria bassiana var. bassiana)",
"cordyceps bassiana (beauveria bassiana)",
"spicaria bassiana (beauveria bassiana)",
"beauveria bassiana var. bassiana (beauveria bassiana)"
] | [
"bassiana",
"boraria infesta",
"blakistonia bassi",
"burkholderia diffusa"
] | Given the context 'B. bassiana isolates caused the highest mortality on thrips (some causing 88% mortality after 6 days); both fungal species caused similarly high mortality levels against whiteflies (75%) after 6 days.', answer the user's query. |
What is the biomedical concept corresponding to 'b. bassiana'? | [
"botrytis bassiana (beauveria bassiana)",
"beauveria bassiana (beauveria bassiana var. bassiana)",
"cordyceps bassiana (beauveria bassiana)",
"spicaria bassiana (beauveria bassiana)",
"beauveria bassiana var. bassiana (beauveria bassiana)"
] | [
"bassiana",
"boraria infesta",
"blakistonia bassi",
"burkholderia diffusa"
] | Given the context 'Large amounts of germplasm of entomopathogenic fungi, fundamentally B. bassiana and M. anisopliae, exist in the habitats sampled; pathogenicity varied among strains, and some strains possessed significant virulence.', answer the user's query. |
What is the biomedical concept corresponding to 'm. anisopliae'? | [
"metarhizium anisopliae (metschn.) sorokin, 1883 (metarhizium anisopliae)",
"metarhizium anisopliae (metarhizium anisopliae (metschn.) sorokin, 1883)",
"penicillium anisopliae (metarhizium anisopliae)",
"isaria anisopliae (metarhizium anisopliae)",
"entomophthora anisopliae (metarhizium anisopliae)"
] | [
"metarhizium anisopliae ma10",
"metarhizium anisopliae f. majus (metarhizium majus)",
"marrubium anisodon",
"metarhizium robertsii"
] | Given the context 'Large amounts of germplasm of entomopathogenic fungi, fundamentally B. bassiana and M. anisopliae, exist in the habitats sampled; pathogenicity varied among strains, and some strains possessed significant virulence.', answer the user's query. |
What is the biomedical concept corresponding to 'european corn borer'? | [
"european corn borer (ostrinia nubilalis)"
] | [
"agrococcus terreus",
"corn earworm (helicoverpa zea)",
"southwestern corn borer (diatraea grandiosella)",
"striped rice borer (chilo suppressalis)"
] | Given the context 'Transcript analysis and comparative evaluation of shaker and slowmo gene homologues from the European corn borer, Ostrinia nubilalis.
', answer the user's query. |
What is the biomedical concept corresponding to 'ostrinia nubilalis'? | [
"ostrinia nubilalis (european corn borer)",
"pyralis nubilalis (ostrinia nubilalis)",
"pyrausta nubilalis (ostrinia nubilalis)",
"european corn borer (ostrinia nubilalis)"
] | [
"oxytenis nubila",
"schinia nubila",
"xyleborus nubilus",
"otiorhynchus nubilus"
] | Given the context 'Transcript analysis and comparative evaluation of shaker and slowmo gene homologues from the European corn borer, Ostrinia nubilalis.
', answer the user's query. |
What is the biomedical concept corresponding to 'ostrinia nubilalis'? | [
"ostrinia nubilalis (european corn borer)",
"pyralis nubilalis (ostrinia nubilalis)",
"pyrausta nubilalis (ostrinia nubilalis)",
"european corn borer (ostrinia nubilalis)"
] | [
"oxytenis nubila",
"schinia nubila",
"xyleborus nubilus",
"otiorhynchus nubilus"
] | Given the context 'Homologues of the Drosophila behaviour-linked genes shaker (shkr) and slowmo (slmo) were identified from Ostrinia nubilalis (Lepidoptera: Crambidae).', answer the user's query. |
What is the biomedical concept corresponding to 'marek's disease virus type 1'? | [
"marek's disease virus type 1 (gallid alphaherpesvirus 2)",
"marek disease virus type 1 (gallid alphaherpesvirus 2)",
"marek's disease virus (gallid alphaherpesvirus 2)",
"mareks disease virus (gallid alphaherpesvirus 2)",
"marek's disease virus (mdv) (gallid alphaherpesvirus 2)"
] | [
"marek's disease virus type 2 (gallid alphaherpesvirus 3)",
"marek's disease-like viruses (mardivirus)",
"marek's disease herpesvirus 2 (gallid alphaherpesvirus 3)",
"mardivirus (marek's disease-like viruses)"
] | Given the context 'Marek's disease virus type 1 microRNA miR-M3 suppresses cisplatin-induced apoptosis by targeting Smad2 of the transforming growth factor beta signal pathway.
', answer the user's query. |
What is the biomedical concept corresponding to 'human'? | [
"human (homo sapiens)",
"homo sapiens (human)"
] | [
"humans (homo)",
"homo (humans)",
"macrobiotus sapiens",
"glossus humanus (cardium humanum)"
] | Given the context 'Viruses cause about 15% of the cancers that are still the leading causes of human mortality.', answer the user's query. |
What is the biomedical concept corresponding to 'marek's disease virus 1'? | [
"marek's disease virus type 1 (gallid alphaherpesvirus 2)",
"marek's disease virus (gallid alphaherpesvirus 2)",
"marek's disease virus (mdv) (gallid alphaherpesvirus 2)",
"mareks disease virus (gallid alphaherpesvirus 2)",
"marek disease virus type 1 (gallid alphaherpesvirus 2)"
] | [
"marek's disease virus type 2 (gallid alphaherpesvirus 3)",
"marek's disease herpesvirus 2 (gallid alphaherpesvirus 3)",
"marek's disease-like viruses (mardivirus)",
"mardivirus (marek's disease-like viruses)"
] | Given the context 'The present study has attempted to investigate the effects of the microRNAs (miRNAs) encoded by Marek's disease virus 1 (MDV1), a chicken herpesvirus causing acute T-cell lymphomas and solid visceral tumors in chickens, on anti-cancer drug-induced apoptosis and identify the targets of the miRNAs.', answer the user's query. |
What is the biomedical concept corresponding to 'mdv1'? | [
"marek's disease virus type 1 mdv1 (gallid alphaherpesvirus 2)",
"marek's disease virus mdv1 (gallid alphaherpesvirus 2)",
"mdv1 (gallid alphaherpesvirus 2) (gallid alphaherpesvirus 2)",
"marek's disease virus serotype 1 mdv-1 (gallid alphaherpesvirus 2)",
"marek disease virus type 1 (gallid alphaherpesviru... | [
"mdv1 (maryland calicivirus 1) (maryland calicivirus 1)",
"maryland calicivirus 1 (mdv1 (maryland calicivirus 1))",
"middleburg virus (middelburg virus)",
"middelburg virus (middleburg virus)"
] | Given the context 'The present study has attempted to investigate the effects of the microRNAs (miRNAs) encoded by Marek's disease virus 1 (MDV1), a chicken herpesvirus causing acute T-cell lymphomas and solid visceral tumors in chickens, on anti-cancer drug-induced apoptosis and identify the targets of the miRNAs.', answer the user's query. |
What is the biomedical concept corresponding to 'chicken'? | [
"chicken (gallus gallus)",
"chickens (gallus gallus)",
"gallus domesticus (gallus gallus)",
"gallus gallus (gallus gallus domesticus)",
"gallus gallus domesticus (gallus gallus)"
] | [
"gallus",
"gallus gallus gallus (gallus gallus philippensis)",
"green junglefowl (gallus varius)",
"common turkey (meleagris gallopavo)"
] | Given the context 'The present study has attempted to investigate the effects of the microRNAs (miRNAs) encoded by Marek's disease virus 1 (MDV1), a chicken herpesvirus causing acute T-cell lymphomas and solid visceral tumors in chickens, on anti-cancer drug-induced apoptosis and identify the targets of the miRNAs.', answer the user's query. |
What is the biomedical concept corresponding to 'chickens'? | [
"chickens (gallus gallus)",
"chicken (gallus gallus)",
"gallus domesticus (gallus gallus)",
"gallus gallus (gallus gallus domesticus)",
"gallus gallus domesticus (gallus gallus)"
] | [
"gallus",
"green junglefowl (gallus varius)",
"gallus sonneratii (gray junglefowl)",
"gallus gallus gallus (gallus gallus philippensis)"
] | Given the context 'The present study has attempted to investigate the effects of the microRNAs (miRNAs) encoded by Marek's disease virus 1 (MDV1), a chicken herpesvirus causing acute T-cell lymphomas and solid visceral tumors in chickens, on anti-cancer drug-induced apoptosis and identify the targets of the miRNAs.', answer the user's query. |
What is the biomedical concept corresponding to 'mdv1'? | [
"marek's disease virus type 1 mdv1 (gallid alphaherpesvirus 2)",
"marek's disease virus mdv1 (gallid alphaherpesvirus 2)",
"mdv1 (gallid alphaherpesvirus 2) (gallid alphaherpesvirus 2)",
"marek's disease virus serotype 1 mdv-1 (gallid alphaherpesvirus 2)",
"marek disease virus type 1 (gallid alphaherpesviru... | [
"mdv1 (maryland calicivirus 1) (maryland calicivirus 1)",
"maryland calicivirus 1 (mdv1 (maryland calicivirus 1))",
"middleburg virus (middelburg virus)",
"middelburg virus (middleburg virus)"
] | Given the context 'The results showed that of the total 14 miRNAs encoded by MDV1, MDV1-miR-M3 significantly promoted cell survival under treatment with cisplatin, a widely used chemotherapy drug.', answer the user's query. |
What is the biomedical concept corresponding to 'mdv1'? | [
"marek's disease virus type 1 mdv1 (gallid alphaherpesvirus 2)",
"marek's disease virus mdv1 (gallid alphaherpesvirus 2)",
"mdv1 (gallid alphaherpesvirus 2) (gallid alphaherpesvirus 2)",
"marek's disease virus serotype 1 mdv-1 (gallid alphaherpesvirus 2)",
"marek disease virus type 1 (gallid alphaherpesviru... | [
"mdv1 (maryland calicivirus 1) (maryland calicivirus 1)",
"maryland calicivirus 1 (mdv1 (maryland calicivirus 1))",
"middleburg virus (middelburg virus)",
"middelburg virus (middleburg virus)"
] | Given the context 'The results showed that of the total 14 miRNAs encoded by MDV1, MDV1-miR-M3 significantly promoted cell survival under treatment with cisplatin, a widely used chemotherapy drug.', answer the user's query. |
What is the biomedical concept corresponding to 'mdv1'? | [
"marek's disease virus type 1 mdv1 (gallid alphaherpesvirus 2)",
"marek's disease virus mdv1 (gallid alphaherpesvirus 2)",
"mdv1 (gallid alphaherpesvirus 2) (gallid alphaherpesvirus 2)",
"marek's disease virus serotype 1 mdv-1 (gallid alphaherpesvirus 2)",
"marek disease virus type 1 (gallid alphaherpesviru... | [
"mdv1 (maryland calicivirus 1) (maryland calicivirus 1)",
"maryland calicivirus 1 (mdv1 (maryland calicivirus 1))",
"middleburg virus (middelburg virus)",
"middelburg virus (middleburg virus)"
] | Given the context 'MDV1-miR-M3 suppressed cisplatin-induced apoptosis by directly downregulating expression at the protein but not the mRNA level of Smad2, a critical component in the transforming growth factor Beta signal pathway.', answer the user's query. |
What is the biomedical concept corresponding to 'silkworm'? | [
"silkworm (bombyx mori)",
"silk moth (bombyx mori)",
"domestic silkworm (bombyx mori)",
"bombyx mori (domestic silkworm)"
] | [
"wild silkworm (bombyx mandarina)",
"silkworm moths (bombycidae)",
"bombyx",
"bombycidae (silkworm moths)"
] | Given the context 'Differentially expressed genes in silkworm cell cultures in response to infection by Wolbachia and Cardinium endosymbionts.
', answer the user's query. |
What is the biomedical concept corresponding to 'silkworm'? | [
"silkworm (bombyx mori)",
"silk moth (bombyx mori)",
"domestic silkworm (bombyx mori)",
"bombyx mori (domestic silkworm)"
] | [
"wild silkworm (bombyx mandarina)",
"silkworm moths (bombycidae)",
"bombyx",
"bombycidae (silkworm moths)"
] | Given the context 'Here we studied differentially expressed genes in Wolbachia- and Cardinium-infected Bm-aff3 silkworm cells using a silkworm microarray.', answer the user's query. |
What is the biomedical concept corresponding to 'silkworm'? | [
"silkworm (bombyx mori)",
"silk moth (bombyx mori)",
"domestic silkworm (bombyx mori)",
"bombyx mori (domestic silkworm)"
] | [
"wild silkworm (bombyx mandarina)",
"silkworm moths (bombycidae)",
"bombyx",
"bombycidae (silkworm moths)"
] | Given the context 'Here we studied differentially expressed genes in Wolbachia- and Cardinium-infected Bm-aff3 silkworm cells using a silkworm microarray.', answer the user's query. |
What is the biomedical concept corresponding to 'human lice'? | [
"human lice (pediculus humanus)",
"head lice (pediculus humanus)",
"body lice (pediculus humanus)",
"human louse (pediculus humanus)",
"pediculus humanus (human louse)"
] | [
"human body lice (pediculus humanus corporis)",
"human head lice (pediculus humanus capitis)",
"human body louse (pediculus humanus corporis)",
"body lice (pediculidae)"
] | Given the context 'We present the characterization of the PEVK domain in two dragonflies and in human lice.', answer the user's query. |
What is the biomedical concept corresponding to 'lethal 2009 pandemic h1n1 influenza virus'? | [
"human influenza a virus (influenza a virus)",
"influenza a virus (human influenza a virus)"
] | [
"h1n1 swine influenza virus",
"influenza a virus (a/louisiana/07/2009(h1n1))",
"influenza a virus (a/netherlands/1084/2009(h1n1))",
"influenza b virus (b/california/108/2015)"
] | Given the context 'T cell-mediated protection against lethal 2009 pandemic H1N1 influenza virus infection in a mouse model.
', answer the user's query. |
What is the biomedical concept corresponding to 'influenza virus'? | [
"influenza virus (unidentified influenza virus)",
"avian influenza virus (unidentified influenza virus)",
"unidentified influenza virus (avian influenza virus)",
"influenzavirus (unidentified influenza virus)"
] | [
"influenza a virus (human influenza a virus)",
"fluav (influenza a virus)",
"human influenza a virus (influenza a virus)",
"influenza virus type a (influenza a virus)"
] | Given the context 'Genetic mutation and reassortment of influenza virus gene segments, in particular those of hemagglutinin (HA) and neuraminidase (NA), that lead to antigenic drift and shift are the major strategies for influenza virus to escape preexisting immunity.', answer the user's query. |
What is the biomedical concept corresponding to 'influenza virus'? | [
"influenza virus (unidentified influenza virus)",
"avian influenza virus (unidentified influenza virus)",
"unidentified influenza virus (avian influenza virus)",
"influenzavirus (unidentified influenza virus)"
] | [
"influenza a virus (human influenza a virus)",
"fluav (influenza a virus)",
"human influenza a virus (influenza a virus)",
"influenza virus type a (influenza a virus)"
] | Given the context 'Genetic mutation and reassortment of influenza virus gene segments, in particular those of hemagglutinin (HA) and neuraminidase (NA), that lead to antigenic drift and shift are the major strategies for influenza virus to escape preexisting immunity.', answer the user's query. |
What is the biomedical concept corresponding to 'h1n1 influenza'? | [
"influenza a virus (human influenza a virus)",
"human influenza a virus (influenza a virus)",
"influenza virus type a (influenza a virus)",
"fluav (influenza a virus)"
] | [
"h1n1 swine influenza virus",
"influenza b virus (influenza virus type b)",
"swine influenza virus",
"influenza virus type b (influenza b virus)"
] | Given the context 'The most recent example of such phenomena is the first pandemic of H1N1 influenza of the 21st century, which started in 2009.', answer the user's query. |
What is the biomedical concept corresponding to 'h1n1 viruses'? | [
"influenza a virus (human influenza a virus)",
"human influenza a virus (influenza a virus)",
"influenza virus type a (influenza a virus)",
"fluav (influenza a virus)"
] | [
"h1n1 swine influenza virus",
"swine influenza virus",
"influenza c viruses (influenza c virus)",
"influenzavirus a (alphainfluenzavirus)"
] | Given the context 'Cross-reactive antibodies raised against H1N1 viruses circulating before 1930 show protective activity against the 2009 pandemic virus.', answer the user's query. |
What is the biomedical concept corresponding to '2009 pandemic virus'? | [
"human influenza a virus (influenza a virus)",
"influenza a virus (human influenza a virus)",
"fluav (influenza a virus)"
] | [
"h1n1 swine influenza virus",
"influenza b virus (b/california/01/2009)",
"influenza a virus (a/california/07/2009(h1n1))",
"influenza b virus (b/california/11/2015)"
] | Given the context 'Cross-reactive antibodies raised against H1N1 viruses circulating before 1930 show protective activity against the 2009 pandemic virus.', answer the user's query. |
What is the biomedical concept corresponding to 'h3 influenza virus'? | [
"influenza a virus (human influenza a virus)",
"human influenza a virus (influenza a virus)",
"influenza virus type a (influenza a virus)",
"fluav (influenza a virus)"
] | [
"influenza c virus (influenza virus type c)",
"influenza virus type c (influenza c virus)",
"influenza c viruses (influenza c virus)",
"influenza b virus (influenza virus type b)"
] | Given the context 'To explore the protection mechanisms in vivo, we primed mice with H1 and H3 influenza virus isolates and rechallenged them with a virus derived from the 2009 H1N1 A/CA/04/09 virus, named CA/E3/09.', answer the user's query. |
What is the biomedical concept corresponding to 'pandemic h1n1 influenza virus'? | [
"human influenza a virus (influenza a virus)",
"influenza a virus (human influenza a virus)",
"fluav (influenza a virus)",
"influenza virus type a (influenza a virus)"
] | [
"h1n1 swine influenza virus",
"influenza b virus (influenza virus type b)",
"influenza a virus (h1n1) (unidentified influenza a virus (h1n1))",
"influenza virus type b (influenza b virus)"
] | Given the context 'Taken together, these results indicate that cross-reactive T cells established after initial priming with distally related viruses can be a vital component for prevention of disease and control of pandemic H1N1 influenza virus infection.', answer the user's query. |
What is the biomedical concept corresponding to 'dermamoeba algensis n. sp.'? | [
"dermamoeba algensis"
] | [
"dermamoeba",
"ectoedemia algeriensis",
"entamoeba muris",
"entamoeba insolita"
] | Given the context 'Dermamoeba algensis n. sp. (Amoebozoa, Dermamoebidae): an algivorous lobose amoeba with complex cell coat and unusual feeding mode.
', answer the user's query. |
What is the biomedical concept corresponding to 'd. algensis n. sp.'? | [
"dermamoeba algensis"
] | [
"deronectes algibensis",
"actinomadura algeriensis",
"devosia algicola",
"daphnia oregonensis"
] | Given the context 'In this paper we describe a third species of this genus, D. algensis n. sp.', answer the user's query. |
What is the biomedical concept corresponding to 'd. algensis'? | [
"dermamoeba algensis"
] | [
"deronectes algibensis",
"devosia algicola",
"actinomadura algeriensis",
"daphnia oregonensis"
] | Given the context 'Accordingly, D. algensis has a wide range of salinity tolerance.
', answer the user's query. |
What is the biomedical concept corresponding to 'staphylococcus aureus'? | [
"staphylococcus pyogenes aureus (staphylococcus aureus)",
"micrococcus aureus (staphylococcus aureus)",
"micrococcus pyogenes (staphylococcus aureus)",
"staphylococcus aureus (staphylococcus aureus subsp. anaerobius)",
"staphlococcus pyogenes citreus (staphylococcus aureus)"
] | [
"streptomyces aureus",
"staphylococcus epidermidis (staphylococcus epidermidis albus)",
"albococcus epidermidis (staphylococcus epidermidis)",
"staphylococcus (aurococcus)"
] | Given the context 'Clinical management of Staphylococcus aureus bacteraemia.
Staphylococcus aureus bacteraemia is one of the most common serious bacterial infections worldwide.', answer the user's query. |
What is the biomedical concept corresponding to 'staphylococcus aureus'? | [
"staphylococcus pyogenes aureus (staphylococcus aureus)",
"micrococcus aureus (staphylococcus aureus)",
"micrococcus pyogenes (staphylococcus aureus)",
"staphylococcus aureus (staphylococcus aureus subsp. anaerobius)",
"staphlococcus pyogenes citreus (staphylococcus aureus)"
] | [
"streptomyces aureus",
"staphylococcus epidermidis (staphylococcus epidermidis albus)",
"albococcus epidermidis (staphylococcus epidermidis)",
"staphylococcus (aurococcus)"
] | Given the context 'Clinical management of Staphylococcus aureus bacteraemia.
Staphylococcus aureus bacteraemia is one of the most common serious bacterial infections worldwide.', answer the user's query. |
What is the biomedical concept corresponding to 's aureus'? | [
"staphylococcus pyogenes aureus (staphylococcus aureus)",
"micrococcus aureus (staphylococcus aureus)",
"micrococcus pyogenes (staphylococcus aureus)",
"staphylococcus aureus (staphylococcus aureus subsp. anaerobius)",
"staphlococcus pyogenes citreus (staphylococcus aureus)"
] | [
"streptomyces aureus",
"staphylococcus faecalis ('staphylococcus faecalis')",
"staphylococcus (aurococcus)",
"staphylococcus epidermidis (staphylococcus epidermidis albus)"
] | Given the context 'To date, fewer than 1500 patients with S aureus bacteraemia have been recruited to 16 controlled trials of antimicrobial therapy.', answer the user's query. |
What is the biomedical concept corresponding to 's aureus'? | [
"staphylococcus pyogenes aureus (staphylococcus aureus)",
"micrococcus aureus (staphylococcus aureus)",
"micrococcus pyogenes (staphylococcus aureus)",
"staphylococcus aureus (staphylococcus aureus subsp. anaerobius)",
"staphlococcus pyogenes citreus (staphylococcus aureus)"
] | [
"streptomyces aureus",
"staphylococcus faecalis ('staphylococcus faecalis')",
"staphylococcus (aurococcus)",
"staphylococcus epidermidis (staphylococcus epidermidis albus)"
] | Given the context 'Here, we propose and review ten unanswered clinical questions commonly posed by those managing S aureus bacteraemia.', answer the user's query. |
What is the biomedical concept corresponding to 's aureus'? | [
"staphylococcus pyogenes aureus (staphylococcus aureus)",
"micrococcus aureus (staphylococcus aureus)",
"micrococcus pyogenes (staphylococcus aureus)",
"staphylococcus aureus (staphylococcus aureus subsp. anaerobius)",
"staphlococcus pyogenes citreus (staphylococcus aureus)"
] | [
"streptomyces aureus",
"staphylococcus faecalis ('staphylococcus faecalis')",
"staphylococcus (aurococcus)",
"staphylococcus epidermidis (staphylococcus epidermidis albus)"
] | Given the context 'Our findings define the major areas of uncertainty in the management of S aureus bacteraemia and highlight just two key principles.', answer the user's query. |
What is the biomedical concept corresponding to 's aureus'? | [
"staphylococcus pyogenes aureus (staphylococcus aureus)",
"micrococcus aureus (staphylococcus aureus)",
"micrococcus pyogenes (staphylococcus aureus)",
"staphylococcus aureus (staphylococcus aureus subsp. anaerobius)",
"staphlococcus pyogenes citreus (staphylococcus aureus)"
] | [
"streptomyces aureus",
"staphylococcus faecalis ('staphylococcus faecalis')",
"staphylococcus (aurococcus)",
"staphylococcus epidermidis (staphylococcus epidermidis albus)"
] | Given the context 'Beyond this, the best drugs, dose, mode of delivery, and duration of therapy are uncertain, a situation compounded by emerging S aureus strains that are resistant to old and new antibiotics.', answer the user's query. |
What is the biomedical concept corresponding to 'hiv'? | [
"human immunodeficiency virus (hiv (human immunodeficiency virus))",
"hiv (human immunodeficiency virus) (human immunodeficiency virus)",
"aids virus (human immunodeficiency virus)"
] | [
"aids virus (human immunodeficiency virus 1)",
"hiv (human immunodeficiency virus 1) (human immunodeficiency virus 1)",
"hiv-1 (human immunodeficiency virus 1)",
"human immunodeficiency virus hiv-1 (human immunodeficiency virus 1)"
] | Given the context 'Key data gaps include incidence and case-fatality ratios for all ages, the contribution of influenza towards admission of adults to hospital for ARI, representative seasonality data, economic burden, and the interaction of influenza with prevalent disorders in Africa, such as malaria, HIV, and malnutrition.
', answer the user's query. |
What is the biomedical concept corresponding to 'hiv-1'? | [
"hiv-1 (human immunodeficiency virus 1)",
"human immunodeficiency virus type 1, hiv-1 (human immunodeficiency virus 1)",
"hiv1 (human immunodeficiency virus 1) (human immunodeficiency virus 1)",
"human immunodeficiency virus-1 hiv-1 (human immunodeficiency virus 1)",
"human immunodeficiency virus 1 hiv-1 (h... | [
"human immunodeficiency virus (hiv (human immunodeficiency virus))",
"hiv (human immunodeficiency virus) (human immunodeficiency virus)",
"aids virus (human immunodeficiency virus)",
"human immunodeficiency virus type 1 (kb-1 isolate)"
] | Given the context 'Association of TRIM22 with the type 1 interferon response and viral control during primary HIV-1 infection.
', answer the user's query. |
What is the biomedical concept corresponding to 'hiv'? | [
"aids virus (human immunodeficiency virus 1)",
"hiv (human immunodeficiency virus 1) (human immunodeficiency virus 1)",
"hiv-1 (human immunodeficiency virus 1)",
"human immunodeficiency virus hiv-1 (human immunodeficiency virus 1)",
"hiv1 (human immunodeficiency virus 1) (human immunodeficiency virus 1)"
] | [
"human immunodeficiency virus (hiv (human immunodeficiency virus))",
"hiv (human immunodeficiency virus) (human immunodeficiency virus)",
"aids virus (human immunodeficiency virus)",
"hiv (human immunodeficiency virus 3) (human immunodeficiency virus 3)"
] | Given the context 'Type 1 interferons (IFNs) induce the expression of the tripartite interaction motif (TRIM) family of E3 ligases, but the contribution of these antiviral factors to HIV pathogenesis is not completely understood.', answer the user's query. |
What is the biomedical concept corresponding to 'hiv-1'? | [
"hiv-1 (human immunodeficiency virus 1)",
"human immunodeficiency virus type 1, hiv-1 (human immunodeficiency virus 1)",
"hiv1 (human immunodeficiency virus 1) (human immunodeficiency virus 1)",
"human immunodeficiency virus-1 hiv-1 (human immunodeficiency virus 1)",
"human immunodeficiency virus 1 hiv-1 (h... | [
"human immunodeficiency virus (hiv (human immunodeficiency virus))",
"hiv (human immunodeficiency virus) (human immunodeficiency virus)",
"aids virus (human immunodeficiency virus)",
"human immunodeficiency virus type 1 (kb-1 isolate)"
] | Given the context 'We hypothesized that the increased expression of select type 1 IFN and TRIM isoforms is associated with a significantly lower likelihood of HIV-1 acquisition and viral control during primary HIV-1 infection.', answer the user's query. |
What is the biomedical concept corresponding to 'hiv-1'? | [
"hiv-1 (human immunodeficiency virus 1)",
"human immunodeficiency virus type 1, hiv-1 (human immunodeficiency virus 1)",
"hiv1 (human immunodeficiency virus 1) (human immunodeficiency virus 1)",
"human immunodeficiency virus-1 hiv-1 (human immunodeficiency virus 1)",
"human immunodeficiency virus 1 hiv-1 (h... | [
"human immunodeficiency virus (hiv (human immunodeficiency virus))",
"hiv (human immunodeficiency virus) (human immunodeficiency virus)",
"aids virus (human immunodeficiency virus)",
"human immunodeficiency virus type 1 (kb-1 isolate)"
] | Given the context 'We hypothesized that the increased expression of select type 1 IFN and TRIM isoforms is associated with a significantly lower likelihood of HIV-1 acquisition and viral control during primary HIV-1 infection.', answer the user's query. |
What is the biomedical concept corresponding to 'human'? | [
"human (homo sapiens)",
"homo sapiens (human)"
] | [
"humans (homo)",
"homo (humans)",
"macrobiotus sapiens",
"glossus humanus (cardium humanum)"
] | Given the context 'We measured IFN-alpha, IFN-Beta, myxovirus resistance protein A (MxA), human TRIM5alpha (huTRIM5alpha), and TRIM22 mRNA levels in peripheral blood mononuclear cells (PBMCs) of high-risk, HIV-1-uninfected participants and HIV-1-positive study participants.', answer the user's query. |
What is the biomedical concept corresponding to 'hiv-1'? | [
"hiv-1 (human immunodeficiency virus 1)",
"human immunodeficiency virus type 1, hiv-1 (human immunodeficiency virus 1)",
"hiv1 (human immunodeficiency virus 1) (human immunodeficiency virus 1)",
"human immunodeficiency virus-1 hiv-1 (human immunodeficiency virus 1)",
"human immunodeficiency virus 1 hiv-1 (h... | [
"human immunodeficiency virus (hiv (human immunodeficiency virus))",
"hiv (human immunodeficiency virus) (human immunodeficiency virus)",
"aids virus (human immunodeficiency virus)",
"human immunodeficiency virus type 1 (kb-1 isolate)"
] | Given the context 'We measured IFN-alpha, IFN-Beta, myxovirus resistance protein A (MxA), human TRIM5alpha (huTRIM5alpha), and TRIM22 mRNA levels in peripheral blood mononuclear cells (PBMCs) of high-risk, HIV-1-uninfected participants and HIV-1-positive study participants.', answer the user's query. |
What is the biomedical concept corresponding to 'hiv-1'? | [
"hiv-1 (human immunodeficiency virus 1)",
"human immunodeficiency virus type 1, hiv-1 (human immunodeficiency virus 1)",
"hiv1 (human immunodeficiency virus 1) (human immunodeficiency virus 1)",
"human immunodeficiency virus-1 hiv-1 (human immunodeficiency virus 1)",
"human immunodeficiency virus 1 hiv-1 (h... | [
"human immunodeficiency virus (hiv (human immunodeficiency virus))",
"hiv (human immunodeficiency virus) (human immunodeficiency virus)",
"aids virus (human immunodeficiency virus)",
"human immunodeficiency virus type 1 (kb-1 isolate)"
] | Given the context 'We measured IFN-alpha, IFN-Beta, myxovirus resistance protein A (MxA), human TRIM5alpha (huTRIM5alpha), and TRIM22 mRNA levels in peripheral blood mononuclear cells (PBMCs) of high-risk, HIV-1-uninfected participants and HIV-1-positive study participants.', answer the user's query. |
What is the biomedical concept corresponding to 'hiv-1'? | [
"hiv-1 (human immunodeficiency virus 1)",
"human immunodeficiency virus type 1, hiv-1 (human immunodeficiency virus 1)",
"hiv1 (human immunodeficiency virus 1) (human immunodeficiency virus 1)",
"human immunodeficiency virus-1 hiv-1 (human immunodeficiency virus 1)",
"human immunodeficiency virus 1 hiv-1 (h... | [
"human immunodeficiency virus (hiv (human immunodeficiency virus))",
"hiv (human immunodeficiency virus) (human immunodeficiency virus)",
"aids virus (human immunodeficiency virus)",
"human immunodeficiency virus type 1 (kb-1 isolate)"
] | Given the context 'HIV-1-positive participants had higher levels of IFN-Beta (P = 0.0005), MxA (P = 0.007), and TRIM22 (P = 0.01) and lower levels of huTRIM5alpha (P < 0.001) than did HIV-1-negative participants.', answer the user's query. |
What is the biomedical concept corresponding to 'hiv-1'? | [
"hiv-1 (human immunodeficiency virus 1)",
"human immunodeficiency virus type 1, hiv-1 (human immunodeficiency virus 1)",
"hiv1 (human immunodeficiency virus 1) (human immunodeficiency virus 1)",
"human immunodeficiency virus-1 hiv-1 (human immunodeficiency virus 1)",
"human immunodeficiency virus 1 hiv-1 (h... | [
"human immunodeficiency virus (hiv (human immunodeficiency virus))",
"hiv (human immunodeficiency virus) (human immunodeficiency virus)",
"aids virus (human immunodeficiency virus)",
"human immunodeficiency virus type 1 (kb-1 isolate)"
] | Given the context 'HIV-1-positive participants had higher levels of IFN-Beta (P = 0.0005), MxA (P = 0.007), and TRIM22 (P = 0.01) and lower levels of huTRIM5alpha (P < 0.001) than did HIV-1-negative participants.', answer the user's query. |
What is the biomedical concept corresponding to 'hiv'? | [
"aids virus (human immunodeficiency virus 1)",
"hiv (human immunodeficiency virus 1) (human immunodeficiency virus 1)",
"hiv-1 (human immunodeficiency virus 1)",
"human immunodeficiency virus hiv-1 (human immunodeficiency virus 1)",
"hiv1 (human immunodeficiency virus 1) (human immunodeficiency virus 1)"
] | [
"human immunodeficiency virus (hiv (human immunodeficiency virus))",
"hiv (human immunodeficiency virus) (human immunodeficiency virus)",
"aids virus (human immunodeficiency virus)",
"hiv (human immunodeficiency virus 3) (human immunodeficiency virus 3)"
] | Given the context 'In vitro studies revealed that HIV infection induced TRIM22 expression in PBMCs obtained from HIV-negative donors.', answer the user's query. |
What is the biomedical concept corresponding to 'hiv'? | [
"aids virus (human immunodeficiency virus 1)",
"hiv (human immunodeficiency virus 1) (human immunodeficiency virus 1)",
"hiv-1 (human immunodeficiency virus 1)",
"human immunodeficiency virus hiv-1 (human immunodeficiency virus 1)",
"hiv1 (human immunodeficiency virus 1) (human immunodeficiency virus 1)"
] | [
"human immunodeficiency virus (hiv (human immunodeficiency virus))",
"hiv (human immunodeficiency virus) (human immunodeficiency virus)",
"aids virus (human immunodeficiency virus)",
"hiv (human immunodeficiency virus 3) (human immunodeficiency virus 3)"
] | Given the context 'In vitro studies revealed that HIV infection induced TRIM22 expression in PBMCs obtained from HIV-negative donors.', answer the user's query. |
What is the biomedical concept corresponding to 'hiv-1'? | [
"hiv-1 (human immunodeficiency virus 1)",
"human immunodeficiency virus type 1, hiv-1 (human immunodeficiency virus 1)",
"hiv1 (human immunodeficiency virus 1) (human immunodeficiency virus 1)",
"human immunodeficiency virus-1 hiv-1 (human immunodeficiency virus 1)",
"human immunodeficiency virus 1 hiv-1 (h... | [
"human immunodeficiency virus (hiv (human immunodeficiency virus))",
"hiv (human immunodeficiency virus) (human immunodeficiency virus)",
"aids virus (human immunodeficiency virus)",
"human immunodeficiency virus type 1 (kb-1 isolate)"
] | Given the context 'Stable TRIM22 knockdown resulted in increased HIV-1 particle release and replication in Jurkat reporter cells.', answer the user's query. |
What is the biomedical concept corresponding to 'campylobacter fetus subsp. venerealis'? | [
"vibrio fetus (campylobacter fetus)"
] | [
"campylobacter fetus venerealis (campylobacter fetus subsp. venerealis)",
"campylobacter fetus subsp. venerealis (campylobacter fetus subsp. venereus)",
"campylobacter fetus subsp. venereus (campylobacter fetus subsp. venerealis)",
"campylobacter fetus subsp. venerealis bv. venerealis"
] | Given the context 'Interbacterial macromolecular transfer by the Campylobacter fetus subsp. venerealis type IV secretion system.
', answer the user's query. |
What is the biomedical concept corresponding to 'campylobacter fetus'? | [
"vibrio fetus (campylobacter fetus)",
"campylobacter fetus (spirillum fetus)",
"spirillum fetus (campylobacter fetus)"
] | [
"campylobacter felis",
"campylobacter fetus fetus (campylobacter fetus subsp. fetus)",
"campylobacter ovis (campylobacter vicugnae)",
"campylobacter suis"
] | Given the context 'We report here the first demonstration of intra- and interspecies conjugative plasmid DNA transfer for Campylobacter fetus.', answer the user's query. |
What is the biomedical concept corresponding to 'campylobacter coli'? | [
"vibrio coli (campylobacter coli)",
"campylobacter coli (campylobacter hyoilei)",
"campylobacter hyoilei (campylobacter coli)"
] | [
"campylobacter",
"vibrio jejuni (campylobacter jejuni)",
"bacterium coli (escherichia coli)",
"campylobacter ovis (campylobacter vicugnae)"
] | Given the context 'Gene regions carried by a Campylobacter coli plasmid were identified that are sufficient for conjugative mobilization to Escherichia coli and C. fetus recipients.', answer the user's query. |
What is the biomedical concept corresponding to 'escherichia coli'? | [
"bacterium coli (escherichia coli)",
"e. coli (escherichia coli)",
"bacillus coli (escherichia coli)",
"enterococcus coli (escherichia coli)",
"bacterium coli commune (escherichia coli)"
] | [
"escherichia",
"escherichia faecalis ('escherichia faecalis')",
"'escherichia faecalis' (escherichia faecalis)",
"escherichia coli c"
] | Given the context 'Gene regions carried by a Campylobacter coli plasmid were identified that are sufficient for conjugative mobilization to Escherichia coli and C. fetus recipients.', answer the user's query. |
What is the biomedical concept corresponding to 'c. fetus'? | [
"campylobacter fetus (spirillum fetus)",
"vibrio fetus (campylobacter fetus)",
"spirillum fetus (campylobacter fetus)"
] | [
"cichlidogyrus gallus",
"chorizococcus",
"campylobacter felis",
"cytauxzoon felis"
] | Given the context 'Gene regions carried by a Campylobacter coli plasmid were identified that are sufficient for conjugative mobilization to Escherichia coli and C. fetus recipients.', answer the user's query. |
What is the biomedical concept corresponding to 'c. fetus subsp. venerealis'? | [
"vibrio fetus (campylobacter fetus)"
] | [
"campylobacter fetus venerealis (campylobacter fetus subsp. venerealis)",
"campylobacter fetus subsp. venerealis bv. venerealis",
"campylobacter fetus subsp. venerealis (campylobacter fetus subsp. venereus)",
"campylobacter fetus subsp. venereus (campylobacter fetus subsp. venerealis)"
] | Given the context 'Efficient DNA transfer involves the virB9 and virD4 genes of the type IV bacterial secretion system encoded by a pathogenicity island of C. fetus subsp. venerealis.', answer the user's query. |
What is the biomedical concept corresponding to 'c. fetus'? | [
"campylobacter fetus (spirillum fetus)",
"vibrio fetus (campylobacter fetus)",
"spirillum fetus (campylobacter fetus)"
] | [
"cichlidogyrus gallus",
"chorizococcus",
"campylobacter felis",
"cytauxzoon felis"
] | Given the context 'Complementation of these phenotypes from expression constructions based on the promoter of the C. fetus surface antigen protein (sap) locus was temperature dependent, and a temperature regulation of the sap promoter was subsequently confirmed under laboratory conditions.', answer the user's query. |
What is the biomedical concept corresponding to 'c. fetus'? | [
"campylobacter fetus (spirillum fetus)",
"vibrio fetus (campylobacter fetus)",
"spirillum fetus (campylobacter fetus)"
] | [
"cichlidogyrus gallus",
"chorizococcus",
"campylobacter felis",
"cytauxzoon felis"
] | Given the context 'Gene transfer was sensitive to surface or entry exclusion functions in potential recipient cells carrying IncPalpha plasmid RP4 implying functional relatedness to C. fetus proteins.', answer the user's query. |
What is the biomedical concept corresponding to 'human'? | [
"human (homo sapiens)",
"homo sapiens (human)"
] | [
"humans (homo)",
"homo (humans)",
"macrobiotus sapiens",
"glossus humanus (cardium humanum)"
] | Given the context 'The virB/virD4 locus is also known to be involved in bacterial invasion and killing of cultured human cells in vitro.', answer the user's query. |
What is the biomedical concept corresponding to 'c. fetus'? | [
"campylobacter fetus (spirillum fetus)",
"vibrio fetus (campylobacter fetus)",
"spirillum fetus (campylobacter fetus)"
] | [
"cichlidogyrus gallus",
"chorizococcus",
"campylobacter felis",
"cytauxzoon felis"
] | Given the context 'Two putative effector proteins carrying an FIC domain conserved in a few bacterial type III and type IV secreted proteins of pathogens were analyzed for secretion by the C. fetus or heterologous conjugative systems.', answer the user's query. |
What is the biomedical concept corresponding to 'serinicoccus profundi sp. nov.'? | [
"serinicoccus profundi"
] | [
"serinicoccus sp.",
"novosphingobium profundi",
"serinicoccus",
"dermacoccus profundi"
] | Given the context 'Serinicoccus profundi sp. nov., an actinomycete isolated from deep-sea sediment, and emended description of the genus Serinicoccus.
', answer the user's query. |
What is the biomedical concept corresponding to 'serinicoccus marinus'? | [
"serinicoccus marinus"
] | [
"rubricoccus marinus",
"safagamyces marinus",
"staphylothermus marinus",
"rhodosorus marinus"
] | Given the context 'Comparison of 16S rRNA gene sequences revealed that the isolate shared 97.6 % sequence similarity with Serinicoccus marinus JC1078(T), the type strain of the only described species of the genus Serinicoccus.', answer the user's query. |
What is the biomedical concept corresponding to 'serinicoccus profundi sp. nov'? | [
"serinicoccus profundi"
] | [
"serinicoccus sp.",
"novosphingobium profundi",
"serinicoccus sp. n131(2010)",
"sphingomonas profundi"
] | Given the context '=CGMCC 4.5582(T)) is assigned as the type strain of a novel species, for which the name Serinicoccus profundi sp. nov. is proposed.
', answer the user's query. |
What is the biomedical concept corresponding to 'human immunodeficiency virus type 1'? | [
"human immunodeficiency virus type 1 (human immunodeficiency virus 1)",
"human immunodeficiency virus hiv-1 (human immunodeficiency virus 1)",
"human immunodeficiency virus type 1, hiv-1 (human immunodeficiency virus 1)",
"hiv-1 (human immunodeficiency virus 1)",
"human immunodeficiency virus 1 (human immun... | [
"human immunodeficiency virus (hiv (human immunodeficiency virus))",
"hiv (human immunodeficiency virus) (human immunodeficiency virus)",
"aids virus (human immunodeficiency virus)",
"human immunodeficiency virus type 1 (new york-5 isolate)"
] | Given the context 'High-titer autologous neutralizing antibody responses have been demonstrated during early subtype C human immunodeficiency virus type 1 (HIV-1) infection.', answer the user's query. |
What is the biomedical concept corresponding to 'hiv-1'? | [
"hiv-1 (human immunodeficiency virus 1)",
"human immunodeficiency virus type 1, hiv-1 (human immunodeficiency virus 1)",
"hiv1 (human immunodeficiency virus 1) (human immunodeficiency virus 1)",
"human immunodeficiency virus-1 hiv-1 (human immunodeficiency virus 1)",
"human immunodeficiency virus 1 hiv-1 (h... | [
"human immunodeficiency virus (hiv (human immunodeficiency virus))",
"hiv (human immunodeficiency virus) (human immunodeficiency virus)",
"aids virus (human immunodeficiency virus)",
"human immunodeficiency virus type 1 (kb-1 isolate)"
] | Given the context 'High-titer autologous neutralizing antibody responses have been demonstrated during early subtype C human immunodeficiency virus type 1 (HIV-1) infection.', answer the user's query. |
What is the biomedical concept corresponding to 'poliovirus'? | [
"poliovirus (enterovirus c)"
] | [
"unidentified poliovirus",
"polio virus 1 (poliovirus 1)",
"poliovirus type 1 (poliovirus 1)",
"human poliovirus 1 (poliovirus 1)"
] | Given the context 'Poliovirus RNA is released from the capsid near a twofold symmetry axis.
', answer the user's query. |
What is the biomedical concept corresponding to 'poliovirus'? | [
"poliovirus (enterovirus c)"
] | [
"unidentified poliovirus",
"polio virus 1 (poliovirus 1)",
"poliovirus type 1 (poliovirus 1)",
"human poliovirus 1 (poliovirus 1)"
] | Given the context 'After recognizing and binding to its host cell, poliovirus (like other nonenveloped viruses) faces the challenge of translocating its genome across a cellular membrane and into the cytoplasm.', answer the user's query. |
What is the biomedical concept corresponding to 'poliovirus'? | [
"poliovirus (enterovirus c)"
] | [
"unidentified poliovirus",
"polio virus 1 (poliovirus 1)",
"poliovirus type 1 (poliovirus 1)",
"human poliovirus 1 (poliovirus 1)"
] | Given the context 'To help to elucidate the mechanism of infection, we have used single-particle cryo-electron microscopy and tomography to reconstruct conformationally altered intermediates that are formed by the poliovirion at various stages of the poliovirus infection process.', answer the user's query. |
What is the biomedical concept corresponding to 'yeast'? | [
"saccharomyces cerevisiae (saccharomyces cerevisiae (desm.) meyen ex e.c. hansen, 1883)",
"baker's yeast (saccharomyces cerevisiae)",
"saccharomyces cerevisiae (desm.) meyen ex e.c. hansen, 1883 (saccharomyces cerevisiae)",
"mycoderma cerevisiae (saccharomyces cerevisiae)",
"brewer's yeast (saccharomyces ce... | [
"saccharomyces lactis (kluyveromyces lactis)",
"saccharomyces hansenii (debaryomyces hansenii)",
"saccharomyces albicans (candida albicans)",
"saccharomyces globosus (saccharomyces uvarum)"
] | Given the context 'Yeast-elicited cross-reactive antibodies to HIV Env glycans efficiently neutralize virions expressing exclusively high-mannose N-linked glycans.
', answer the user's query. |
What is the biomedical concept corresponding to 'hiv'? | [
"human immunodeficiency virus (hiv (human immunodeficiency virus))",
"hiv (human immunodeficiency virus) (human immunodeficiency virus)",
"aids virus (human immunodeficiency virus)"
] | [
"aids virus (human immunodeficiency virus 1)",
"hiv (human immunodeficiency virus 1) (human immunodeficiency virus 1)",
"hiv-1 (human immunodeficiency virus 1)",
"human immunodeficiency virus hiv-1 (human immunodeficiency virus 1)"
] | Given the context 'Yeast-elicited cross-reactive antibodies to HIV Env glycans efficiently neutralize virions expressing exclusively high-mannose N-linked glycans.
', answer the user's query. |
What is the biomedical concept corresponding to 'saccharomyces cerevisiae'? | [
"saccharomyces cerevisiae (saccharomyces cerevisiae (desm.) meyen ex e.c. hansen, 1883)",
"saccharomyces cerevisiae (desm.) meyen ex e.c. hansen, 1883 (saccharomyces cerevisiae)",
"baker's yeast (saccharomyces cerevisiae)",
"mycoderma cerevisiae (saccharomyces cerevisiae)",
"saccharomyces italicus (saccharo... | [
"saccharomyces globosus (saccharomyces uvarum)",
"saccharomyces lactis (kluyveromyces lactis)",
"saccharomyces albicans (candida albicans)",
"saccharomyces hansenii (debaryomyces hansenii)"
] | Given the context 'We have described a triple mutant Saccharomyces cerevisiae strain that expresses high-mannose glycoproteins that bind to 2G12.', answer the user's query. |
What is the biomedical concept corresponding to 'rabbits'? | [
"rabbits (oryctolagus cuniculus)",
"rabbit (oryctolagus cuniculus)",
"domestic rabbit (oryctolagus cuniculus)",
"european rabbit (oryctolagus cuniculus)",
"japanese white rabbit (oryctolagus cuniculus)"
] | [
"marsh rabbit (sylvilagus palustris)",
"swamp rabbit (sylvilagus aquaticus)",
"rabbits and hares (leporidae)",
"oryctolagus cuniculus cuniculus (lepus cuniculus cuniculus)"
] | Given the context 'When used to immunize rabbits, this yeast elicits antibodies that bind to gp120-associated glycans but fail to neutralize virus.', answer the user's query. |
What is the biomedical concept corresponding to 'yeast'? | [
"saccharomyces cerevisiae (saccharomyces cerevisiae (desm.) meyen ex e.c. hansen, 1883)",
"baker's yeast (saccharomyces cerevisiae)",
"saccharomyces cerevisiae (desm.) meyen ex e.c. hansen, 1883 (saccharomyces cerevisiae)",
"mycoderma cerevisiae (saccharomyces cerevisiae)",
"brewer's yeast (saccharomyces ce... | [
"saccharomyces lactis (kluyveromyces lactis)",
"saccharomyces hansenii (debaryomyces hansenii)",
"saccharomyces albicans (candida albicans)",
"saccharomyces globosus (saccharomyces uvarum)"
] | Given the context 'When used to immunize rabbits, this yeast elicits antibodies that bind to gp120-associated glycans but fail to neutralize virus.', answer the user's query. |
What is the biomedical concept corresponding to 'yeast'? | [
"saccharomyces cerevisiae (saccharomyces cerevisiae (desm.) meyen ex e.c. hansen, 1883)",
"baker's yeast (saccharomyces cerevisiae)",
"saccharomyces cerevisiae (desm.) meyen ex e.c. hansen, 1883 (saccharomyces cerevisiae)",
"mycoderma cerevisiae (saccharomyces cerevisiae)",
"brewer's yeast (saccharomyces ce... | [
"saccharomyces lactis (kluyveromyces lactis)",
"saccharomyces hansenii (debaryomyces hansenii)",
"saccharomyces albicans (candida albicans)",
"saccharomyces globosus (saccharomyces uvarum)"
] | Given the context 'Affinity purification of sera over columns conjugated with three 2G12-reactive yeast glycoproteins showed that these proteins could adsorb 80% of the antibodies that bind to gp120 glycans.', answer the user's query. |
What is the biomedical concept corresponding to 'yeast'? | [
"saccharomyces cerevisiae (saccharomyces cerevisiae (desm.) meyen ex e.c. hansen, 1883)",
"baker's yeast (saccharomyces cerevisiae)",
"saccharomyces cerevisiae (desm.) meyen ex e.c. hansen, 1883 (saccharomyces cerevisiae)",
"mycoderma cerevisiae (saccharomyces cerevisiae)",
"brewer's yeast (saccharomyces ce... | [
"saccharomyces lactis (kluyveromyces lactis)",
"saccharomyces hansenii (debaryomyces hansenii)",
"saccharomyces albicans (candida albicans)",
"saccharomyces globosus (saccharomyces uvarum)"
] | Given the context 'Combined, these data show that the triple mutant yeast strain elicits antibodies that bind to high-mannose glycans presented on the HIV envelope, but only when they are displayed in a manner not found on native Env trimers.', answer the user's query. |
What is the biomedical concept corresponding to 'rat cytomegalovirus'? | [
"rat cytomegalovirus (murid betaherpesvirus 2)",
"murid betaherpesvirus 2 (rat cytomegalovirus)"
] | [
"rat herpesvirus",
"rattus rattus cytomegalovirus 1",
"mouse cytomegalovirus",
"rattus tiomanicus cytomegalovirus 1"
] | Given the context 'Here, we report the sequencing of the small RNAs in rat cytomegalovirus (RCMV)-infected fibroblasts and persistently infected salivary glands.', answer the user's query. |
What is the biomedical concept corresponding to 'mouse cytomegalovirus'? | [
"murine cytomegalovirus (murid betaherpesvirus 1)",
"murine cytomegalovirus mcmv (murid betaherpesvirus 1)",
"murine cytomegalovirus (mcmv) (murid betaherpesvirus 1)",
"mouse cytomegalovirus 1 (murid betaherpesvirus 1)",
"murid betaherpesvirus 1 (murine cytomegalovirus (mcmv))"
] | [
"mouse cytomegalovirus",
"murine herpesvirus",
"mus musculus cytomegalovirus 2",
"murid betaherpesvirus 2 (rat cytomegalovirus)"
] | Given the context 'The RCMV miRNAs have a genomic positional orientation similar to that of the miRNAs described for mouse cytomegalovirus, but they do not share any substantial sequence conservation.', answer the user's query. |
What is the biomedical concept corresponding to 'mice'? | [
"mouse (mus musculus)",
"house mouse (mus musculus)",
"mus musculus (house mouse)"
] | [
"mouse (mus <genus>)",
"mus musculus musculus (eastern european house mouse)",
"mice (mus <genus>) (mus <genus>)",
"western european house mouse (mus musculus domesticus)"
] | Given the context 'Furthermore, infection of mice with rJPVDeltaSH induced more TNF-alpha expression, indicating that SH plays a role in blocking TNF-alpha expression in vivo.
', answer the user's query. |
What is the biomedical concept corresponding to 'human cytomegalovirus'? | [
"human cytomegalovirus (human betaherpesvirus 5)",
"human herpesvirus 5 (human betaherpesvirus 5)"
] | [
"cytomegalovirus",
"unidentified cytomegalovirus",
"murine cytomegalovirus (mcmv) (murid betaherpesvirus 1)",
"mouse cytomegalovirus"
] | Given the context 'Translational control of the abundance of cytoplasmic poly(A) binding protein in human cytomegalovirus-infected cells.
', answer the user's query. |
What is the biomedical concept corresponding to 'herpes simplex virus type 1'? | [
"herpes simplex virus type 1 (human alphaherpesvirus 1)",
"herpes simplex virus hsv-1 (human alphaherpesvirus 1)",
"herpes simplex virus 1 (human alphaherpesvirus 1)",
"herpes simplex virus 1 hsv-1 (human alphaherpesvirus 1)",
"herpes simplex virus type 1 hsv-1 (human alphaherpesvirus 1)"
] | [
"herpes simplexvirus",
"herpes simplex virus (type 1 / strain f) (human alphaherpesvirus 1 strain f)",
"human alphaherpesvirus 1 strain f (herpes simplex virus (type 1 / strain f))",
"herpes simplex virus (type 1 / strain kos) (human alphaherpesvirus 1 strain kos)"
] | Given the context 'Irrespective of their effects on ongoing host protein synthesis, productive replication of the representative alphaherpesvirus herpes simplex virus type 1, the representative gammaherpesvirus Kaposi's sarcoma herpesvirus, and the representative betaherpesvirus human cytomegalovirus [HCMV] stimulates the assembly of the multisubunit, cap-binding translation factor eIF4F. However, only HCMV replication is associated with an increased abundance of eIF4F core components (eIF4E, eIF4G, eIF4A) and the eIF4F-associated factor poly(A) binding protein (PABP).', answer the user's query. |
What is the biomedical concept corresponding to 'kaposi's sarcoma herpesvirus'? | [
"kaposi's sarcoma herpesvirus (human gammaherpesvirus 8)",
"kaposi's sarcoma-associated herpesvirus (human gammaherpesvirus 8)",
"kaposi's sarcoma-associated herpes-like virus (human gammaherpesvirus 8)",
"kaposi's sarcoma-associated herpesvirus - human herpesvirus 8 (human gammaherpesvirus 8)",
"human gamm... | [
"kaptombes virus",
"cottontail herpesvirus (herpesvirus sylvilagus)",
"human herpesvirus 1 (human alphaherpesvirus 1)",
"herpesvirus tamarinus (saimiriine alphaherpesvirus 1)"
] | Given the context 'Irrespective of their effects on ongoing host protein synthesis, productive replication of the representative alphaherpesvirus herpes simplex virus type 1, the representative gammaherpesvirus Kaposi's sarcoma herpesvirus, and the representative betaherpesvirus human cytomegalovirus [HCMV] stimulates the assembly of the multisubunit, cap-binding translation factor eIF4F. However, only HCMV replication is associated with an increased abundance of eIF4F core components (eIF4E, eIF4G, eIF4A) and the eIF4F-associated factor poly(A) binding protein (PABP).', answer the user's query. |
What is the biomedical concept corresponding to 'human cytomegalovirus'? | [
"human cytomegalovirus (human betaherpesvirus 5)",
"human herpesvirus 5 (human betaherpesvirus 5)"
] | [
"cytomegalovirus",
"unidentified cytomegalovirus",
"murine cytomegalovirus (mcmv) (murid betaherpesvirus 1)",
"mouse cytomegalovirus"
] | Given the context 'Irrespective of their effects on ongoing host protein synthesis, productive replication of the representative alphaherpesvirus herpes simplex virus type 1, the representative gammaherpesvirus Kaposi's sarcoma herpesvirus, and the representative betaherpesvirus human cytomegalovirus [HCMV] stimulates the assembly of the multisubunit, cap-binding translation factor eIF4F. However, only HCMV replication is associated with an increased abundance of eIF4F core components (eIF4E, eIF4G, eIF4A) and the eIF4F-associated factor poly(A) binding protein (PABP).', answer the user's query. |
What is the biomedical concept corresponding to 'hcmv'? | [
"human cytomegalovirus (human betaherpesvirus 5)",
"human herpesvirus 5 (human betaherpesvirus 5)",
"human betaherpesvirus 5 (human herpesvirus type 5)",
"human herpesvirus type 5 (human betaherpesvirus 5)"
] | [
"cytomegalovirus",
"unidentified cytomegalovirus",
"human herpesvirus 1 (human alphaherpesvirus 1)",
"rodent herpesvirus"
] | Given the context 'Irrespective of their effects on ongoing host protein synthesis, productive replication of the representative alphaherpesvirus herpes simplex virus type 1, the representative gammaherpesvirus Kaposi's sarcoma herpesvirus, and the representative betaherpesvirus human cytomegalovirus [HCMV] stimulates the assembly of the multisubunit, cap-binding translation factor eIF4F. However, only HCMV replication is associated with an increased abundance of eIF4F core components (eIF4E, eIF4G, eIF4A) and the eIF4F-associated factor poly(A) binding protein (PABP).', answer the user's query. |
What is the biomedical concept corresponding to 'hcmv'? | [
"human cytomegalovirus (human betaherpesvirus 5)",
"human herpesvirus 5 (human betaherpesvirus 5)",
"human betaherpesvirus 5 (human herpesvirus type 5)",
"human herpesvirus type 5 (human betaherpesvirus 5)"
] | [
"cytomegalovirus",
"unidentified cytomegalovirus",
"human herpesvirus 1 (human alphaherpesvirus 1)",
"rodent herpesvirus"
] | Given the context 'Irrespective of their effects on ongoing host protein synthesis, productive replication of the representative alphaherpesvirus herpes simplex virus type 1, the representative gammaherpesvirus Kaposi's sarcoma herpesvirus, and the representative betaherpesvirus human cytomegalovirus [HCMV] stimulates the assembly of the multisubunit, cap-binding translation factor eIF4F. However, only HCMV replication is associated with an increased abundance of eIF4F core components (eIF4E, eIF4G, eIF4A) and the eIF4F-associated factor poly(A) binding protein (PABP).', answer the user's query. |
What is the biomedical concept corresponding to 'hcmv'? | [
"human cytomegalovirus (human betaherpesvirus 5)",
"human herpesvirus 5 (human betaherpesvirus 5)",
"human betaherpesvirus 5 (human herpesvirus type 5)",
"human herpesvirus type 5 (human betaherpesvirus 5)"
] | [
"cytomegalovirus",
"unidentified cytomegalovirus",
"human herpesvirus 1 (human alphaherpesvirus 1)",
"rodent herpesvirus"
] | Given the context 'Here, we demonstrate that the increase in translation factor concentration was readily detected in an asynchronous population of HCMV-infected primary human fibroblasts, abolished by prior UV inactivation of virus, and genetically dependent upon viral immediate-early genes.', answer the user's query. |
What is the biomedical concept corresponding to 'human'? | [
"human (homo sapiens)",
"homo sapiens (human)"
] | [
"humans (homo)",
"homo (humans)",
"macrobiotus sapiens",
"glossus humanus (cardium humanum)"
] | Given the context 'Here, we demonstrate that the increase in translation factor concentration was readily detected in an asynchronous population of HCMV-infected primary human fibroblasts, abolished by prior UV inactivation of virus, and genetically dependent upon viral immediate-early genes.', answer the user's query. |
What is the biomedical concept corresponding to 'hcmv'? | [
"human cytomegalovirus (human betaherpesvirus 5)",
"human herpesvirus 5 (human betaherpesvirus 5)",
"human betaherpesvirus 5 (human herpesvirus type 5)",
"human herpesvirus type 5 (human betaherpesvirus 5)"
] | [
"cytomegalovirus",
"unidentified cytomegalovirus",
"human herpesvirus 1 (human alphaherpesvirus 1)",
"rodent herpesvirus"
] | Given the context 'Strikingly, while increased mRNA steady-state levels accompanied the rise in eIF4E and eIF4G protein levels, the overall abundance of PABP mRNA, together with the half-life of the polypeptide it encodes, remained relatively unchanged by HCMV infection.', answer the user's query. |
What is the biomedical concept corresponding to 'hcmv'? | [
"human cytomegalovirus (human betaherpesvirus 5)",
"human herpesvirus 5 (human betaherpesvirus 5)",
"human betaherpesvirus 5 (human herpesvirus type 5)",
"human herpesvirus type 5 (human betaherpesvirus 5)"
] | [
"cytomegalovirus",
"unidentified cytomegalovirus",
"human herpesvirus 1 (human alphaherpesvirus 1)",
"rodent herpesvirus"
] | Given the context 'Instead, HCMV-induced PABP accumulation resulted from new protein synthesis and was sensitive to the mTORC1-selective inhibitor rapamycin, which interferes with phosphorylation of the mTORC1 substrate p70 S6K and the translational repressor 4E-BP1.', answer the user's query. |
What is the biomedical concept corresponding to 'hcmv'? | [
"human cytomegalovirus (human betaherpesvirus 5)",
"human herpesvirus 5 (human betaherpesvirus 5)",
"human betaherpesvirus 5 (human herpesvirus type 5)",
"human herpesvirus type 5 (human betaherpesvirus 5)"
] | [
"cytomegalovirus",
"unidentified cytomegalovirus",
"human herpesvirus 1 (human alphaherpesvirus 1)",
"rodent herpesvirus"
] | Given the context 'Finally, unlike the situation in alpha- or gammaherpesvirus-infected cells, where PABP is redistributed to nuclei, PABP accumulated in the cytoplasm of HCMV-infected cells.', answer the user's query. |
What is the biomedical concept corresponding to 'hcmv'? | [
"human cytomegalovirus (human betaherpesvirus 5)",
"human herpesvirus 5 (human betaherpesvirus 5)",
"human betaherpesvirus 5 (human herpesvirus type 5)",
"human herpesvirus type 5 (human betaherpesvirus 5)"
] | [
"cytomegalovirus",
"unidentified cytomegalovirus",
"human herpesvirus 1 (human alphaherpesvirus 1)",
"rodent herpesvirus"
] | Given the context 'Thus, cytoplasmic PABP accumulation is translationally controlled in HCMV-infected cells via a mechanism requiring mTORC1-mediated inhibition of the cellular 4E-BP1 translational repressor.
', answer the user's query. |
What is the biomedical concept corresponding to 'epstein-barr virus'? | [
"epstein-barr virus (human gammaherpesvirus 4)",
"epstein barr virus (human gammaherpesvirus 4)",
"epstein-barr virus ebv (human gammaherpesvirus 4)",
"human herpesvirus 4 (epstein-barr virus) (human gammaherpesvirus 4)",
"ebv (human gammaherpesvirus 4) (human gammaherpesvirus 4)"
] | [
"epstein-barr virus type 1 (human herpesvirus 4 type 1)",
"epstein-barr virus type 1 ebv-1 (human herpesvirus 4 type 1)",
"epstein-barr virus type 2 (human herpesvirus 4 type 2)",
"bovine lymphotropic herpesvirus (blhv (bovine lymphotropic herpesvirus))"
] | Given the context 'A new model of Epstein-Barr virus infection reveals an important role for earlylytic viral protein expression in the development of lymphomas.
Epstein-Barr virus (EBV) infects cells in latent or lytic forms, but the roleof lytic infection in EBV-induced lymphomas is unclear.', answer the user's query. |
What is the biomedical concept corresponding to 'epstein-barr virus'? | [
"epstein-barr virus (human gammaherpesvirus 4)",
"epstein barr virus (human gammaherpesvirus 4)",
"epstein-barr virus ebv (human gammaherpesvirus 4)",
"human herpesvirus 4 (epstein-barr virus) (human gammaherpesvirus 4)",
"ebv (human gammaherpesvirus 4) (human gammaherpesvirus 4)"
] | [
"epstein-barr virus type 1 (human herpesvirus 4 type 1)",
"epstein-barr virus type 1 ebv-1 (human herpesvirus 4 type 1)",
"epstein-barr virus type 2 (human herpesvirus 4 type 2)",
"bovine lymphotropic herpesvirus (blhv (bovine lymphotropic herpesvirus))"
] | Given the context 'A new model of Epstein-Barr virus infection reveals an important role for earlylytic viral protein expression in the development of lymphomas.
Epstein-Barr virus (EBV) infects cells in latent or lytic forms, but the roleof lytic infection in EBV-induced lymphomas is unclear.', answer the user's query. |
What is the biomedical concept corresponding to 'ebv'? | [
"epstein-barr virus ebv (human gammaherpesvirus 4)",
"ebv (human gammaherpesvirus 4) (human gammaherpesvirus 4)",
"epstein-barr virus (human gammaherpesvirus 4)",
"epstein barr virus (human gammaherpesvirus 4)",
"human herpesvirus 4 (epstein-barr virus) (human gammaherpesvirus 4)"
] | [
"bat herpesvirus",
"bat betaherpesvirus",
"bohnovirus",
"bohxovirus oralis"
] | Given the context 'A new model of Epstein-Barr virus infection reveals an important role for earlylytic viral protein expression in the development of lymphomas.
Epstein-Barr virus (EBV) infects cells in latent or lytic forms, but the roleof lytic infection in EBV-induced lymphomas is unclear.', answer the user's query. |
What is the biomedical concept corresponding to 'ebv'? | [
"epstein-barr virus ebv (human gammaherpesvirus 4)",
"ebv (human gammaherpesvirus 4) (human gammaherpesvirus 4)",
"epstein-barr virus (human gammaherpesvirus 4)",
"epstein barr virus (human gammaherpesvirus 4)",
"human herpesvirus 4 (epstein-barr virus) (human gammaherpesvirus 4)"
] | [
"bat herpesvirus",
"bat betaherpesvirus",
"bohnovirus",
"bohxovirus oralis"
] | Given the context 'A new model of Epstein-Barr virus infection reveals an important role for earlylytic viral protein expression in the development of lymphomas.
Epstein-Barr virus (EBV) infects cells in latent or lytic forms, but the roleof lytic infection in EBV-induced lymphomas is unclear.', answer the user's query. |
What is the biomedical concept corresponding to 'mouse'? | [
"mouse (mus musculus)",
"mus musculus (house mouse)",
"house mouse (mus musculus)"
] | [
"mouse (mus <genus>)",
"mus musculus musculus (eastern european house mouse)",
"western european house mouse (mus musculus domesticus)",
"mus musculus domesticus (western european house mouse)"
] | Given the context 'Here, we have used anew humanized mouse model, in which both human fetal CD34(+) hematopoietic stemcells and thymus/liver tissue are transplanted, to compare EBV pathogenesis andlymphoma formation following infection with a lytic replication-defectiveBZLF1-deleted (Z-KO) virus or a lytically active BZLF1(+) control.', answer the user's query. |
What is the biomedical concept corresponding to 'human'? | [
"human (homo sapiens)",
"homo sapiens (human)"
] | [
"humans (homo)",
"homo (humans)",
"macrobiotus sapiens",
"glossus humanus (cardium humanum)"
] | Given the context 'Here, we have used anew humanized mouse model, in which both human fetal CD34(+) hematopoietic stemcells and thymus/liver tissue are transplanted, to compare EBV pathogenesis andlymphoma formation following infection with a lytic replication-defectiveBZLF1-deleted (Z-KO) virus or a lytically active BZLF1(+) control.', answer the user's query. |
What is the biomedical concept corresponding to 'ebv'? | [
"epstein-barr virus ebv (human gammaherpesvirus 4)",
"ebv (human gammaherpesvirus 4) (human gammaherpesvirus 4)",
"epstein-barr virus (human gammaherpesvirus 4)",
"epstein barr virus (human gammaherpesvirus 4)",
"human herpesvirus 4 (epstein-barr virus) (human gammaherpesvirus 4)"
] | [
"bat herpesvirus",
"bat betaherpesvirus",
"bohnovirus",
"bohxovirus oralis"
] | Given the context 'Here, we have used anew humanized mouse model, in which both human fetal CD34(+) hematopoietic stemcells and thymus/liver tissue are transplanted, to compare EBV pathogenesis andlymphoma formation following infection with a lytic replication-defectiveBZLF1-deleted (Z-KO) virus or a lytically active BZLF1(+) control.', answer the user's query. |
What is the biomedical concept corresponding to 'ebv'? | [
"epstein-barr virus ebv (human gammaherpesvirus 4)",
"ebv (human gammaherpesvirus 4) (human gammaherpesvirus 4)",
"epstein-barr virus (human gammaherpesvirus 4)",
"epstein barr virus (human gammaherpesvirus 4)",
"human herpesvirus 4 (epstein-barr virus) (human gammaherpesvirus 4)"
] | [
"bat herpesvirus",
"bat betaherpesvirus",
"bohnovirus",
"bohxovirus oralis"
] | Given the context 'Specific immune responses against EBV-infected B cellswere generated in mice infected with either the control virus or the Z-KOvirus.', answer the user's query. |
What is the biomedical concept corresponding to 'mice'? | [
"mouse (mus musculus)",
"house mouse (mus musculus)",
"mus musculus (house mouse)"
] | [
"mouse (mus <genus>)",
"mus musculus musculus (eastern european house mouse)",
"mice (mus <genus>) (mus <genus>)",
"western european house mouse (mus musculus domesticus)"
] | Given the context 'Specific immune responses against EBV-infected B cellswere generated in mice infected with either the control virus or the Z-KOvirus.', answer the user's query. |
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