query stringlengths 53 100 | positive listlengths 1 5 | negative listlengths 1 4 | system stringlengths 68 790 |
|---|---|---|---|
What is the biomedical concept corresponding to 'ebv'? | [
"epstein-barr virus ebv (human gammaherpesvirus 4)",
"ebv (human gammaherpesvirus 4) (human gammaherpesvirus 4)",
"epstein-barr virus (human gammaherpesvirus 4)",
"epstein barr virus (human gammaherpesvirus 4)",
"human herpesvirus 4 (epstein-barr virus) (human gammaherpesvirus 4)"
] | [
"bat herpesvirus",
"bat betaherpesvirus",
"bohnovirus",
"bohxovirus oralis"
] | Given the context 'These results point to animportant role for lytic EBV infection in the development of B cell lymphomasin the context of an active host immune response.
', answer the user's query. |
What is the biomedical concept corresponding to 'mice'? | [
"mouse (mus musculus)",
"house mouse (mus musculus)",
"mus musculus (house mouse)"
] | [
"mouse (mus <genus>)",
"mus musculus musculus (eastern european house mouse)",
"mice (mus <genus>) (mus <genus>)",
"western european house mouse (mus musculus domesticus)"
] | Given the context 'Successful vaccination strategies that protect aged mice from lethal challenge from influenza virus and heterologous severe acute respiratory syndrome coronavirus.
', answer the user's query. |
What is the biomedical concept corresponding to 'severe acute respiratory syndrome coronavirus'? | [
"sarsrcov (severe acute respiratory syndrome-related coronavirus)",
"sarsr-cov (severe acute respiratory syndrome-related coronavirus)",
"severe acute respiratory syndrome-related coronavirus (sars (severe acute respiratory syndrome-related coronavirus))",
"hcov-sars (severe acute respiratory syndrome-related... | [
"sars-cov (severe acute respiratory syndrome coronavirus)",
"sars virus (severe acute respiratory syndrome coronavirus)",
"severe acute respiratory syndrome coronavirus (sars coronavirus)",
"sars coronavirus (severe acute respiratory syndrome coronavirus)"
] | Given the context 'Successful vaccination strategies that protect aged mice from lethal challenge from influenza virus and heterologous severe acute respiratory syndrome coronavirus.
', answer the user's query. |
What is the biomedical concept corresponding to 'humans'? | [
"human (homo sapiens)",
"homo sapiens (human)"
] | [
"humans (homo)",
"homo (humans)",
"macrobiotus sapiens",
"glossus humanus (cardium humanum)"
] | Given the context 'Newly emerging viruses often circulate as a heterogeneous swarm in wild animal reservoirs prior to their emergence in humans, and their antigenic identities are often unknown until an outbreak situation.', answer the user's query. |
What is the biomedical concept corresponding to 'severe acute respiratory syndrome coronavirus'? | [
"sarsrcov (severe acute respiratory syndrome-related coronavirus)",
"sarsr-cov (severe acute respiratory syndrome-related coronavirus)",
"severe acute respiratory syndrome-related coronavirus (sars (severe acute respiratory syndrome-related coronavirus))",
"hcov-sars (severe acute respiratory syndrome-related... | [
"sars-cov (severe acute respiratory syndrome coronavirus)",
"sars virus (severe acute respiratory syndrome coronavirus)",
"severe acute respiratory syndrome coronavirus (sars coronavirus)",
"sars coronavirus (severe acute respiratory syndrome coronavirus)"
] | Given the context 'The newly emerging severe acute respiratory syndrome coronavirus (SARS-CoV) and reemerging influenza virus cause disproportionate disease in the aged, who are also notoriously difficult to successfully vaccinate, likely due to immunosenescence.', answer the user's query. |
What is the biomedical concept corresponding to 'sars-cov'? | [
"sarsr-cov (severe acute respiratory syndrome-related coronavirus)",
"sarsrcov (severe acute respiratory syndrome-related coronavirus)",
"sars-related coronavirus (severe acute respiratory syndrome-related coronavirus)",
"hcov-sars (severe acute respiratory syndrome-related coronavirus)",
"severe acute resp... | [
"sars-cov (severe acute respiratory syndrome coronavirus)",
"sars virus (severe acute respiratory syndrome coronavirus)",
"sars coronavirus (severe acute respiratory syndrome coronavirus)",
"severe acute respiratory syndrome coronavirus (sars coronavirus)"
] | Given the context 'The newly emerging severe acute respiratory syndrome coronavirus (SARS-CoV) and reemerging influenza virus cause disproportionate disease in the aged, who are also notoriously difficult to successfully vaccinate, likely due to immunosenescence.', answer the user's query. |
What is the biomedical concept corresponding to 'venezuelan equine encephalitis virus'? | [
"venezuelan equine encephalomyelitis virus (venezuelan equine encephalitis virus)",
"venezuelan equine encephalitis virus (veev (venezuelan equine encephalitis virus))",
"veev (venezuelan equine encephalitis virus) (venezuelan equine encephalitis virus)",
"vee (venezuelan equine encephalitis virus) (venezuela... | [
"venezuelan equine encephalitis virus (strain trinidad donkey)",
"venezuelan equine encephalitis virus vi (rio negro virus)",
"venezuelan equine encephalitis virus (strain tc-83)",
"venezuelan equine encephalitis virus (strain cpa201)"
] | Given the context 'From initial studies, we hypothesized that attenuated Venezuelan equine encephalitis virus (VEE) replicon particle (VRP) vaccine glycoproteins mediated vaccine failure in the aged.', answer the user's query. |
What is the biomedical concept corresponding to 'vee'? | [
"vee (venezuelan equine encephalitis virus) (venezuelan equine encephalitis virus)",
"venezuelan equine encephalitis vee (venezuelan equine encephalitis virus)",
"venezuelan equine encephalitis virus (veev (venezuelan equine encephalitis virus))",
"veev (venezuelan equine encephalitis virus) (venezuelan equin... | [
"enterovirus e (bev (enterovirus e))",
"equine encephalosis virus (equine encephalosis virus (eev))",
"equine encephalosis virus (eev) (equine encephalosis virus)",
"erve virus"
] | Given the context 'From initial studies, we hypothesized that attenuated Venezuelan equine encephalitis virus (VEE) replicon particle (VRP) vaccine glycoproteins mediated vaccine failure in the aged.', answer the user's query. |
What is the biomedical concept corresponding to 'vee'? | [
"vee (venezuelan equine encephalitis virus) (venezuelan equine encephalitis virus)",
"venezuelan equine encephalitis vee (venezuelan equine encephalitis virus)",
"venezuelan equine encephalitis virus (veev (venezuelan equine encephalitis virus))",
"veev (venezuelan equine encephalitis virus) (venezuelan equin... | [
"enterovirus e (bev (enterovirus e))",
"equine encephalosis virus (equine encephalosis virus (eev))",
"equine encephalosis virus (eev) (equine encephalosis virus)",
"erve virus"
] | Given the context 'We then compared the efficacies of vaccines bearing attenuated (VRP(3014)) or wild-type VEE glycoproteins (VRP(3000)) in young and aged mice within novel models of severe SARS-CoV pathogenesis.', answer the user's query. |
What is the biomedical concept corresponding to 'mice'? | [
"mouse (mus musculus)",
"house mouse (mus musculus)",
"mus musculus (house mouse)"
] | [
"mouse (mus <genus>)",
"mus musculus musculus (eastern european house mouse)",
"mice (mus <genus>) (mus <genus>)",
"western european house mouse (mus musculus domesticus)"
] | Given the context 'We then compared the efficacies of vaccines bearing attenuated (VRP(3014)) or wild-type VEE glycoproteins (VRP(3000)) in young and aged mice within novel models of severe SARS-CoV pathogenesis.', answer the user's query. |
What is the biomedical concept corresponding to 'sars-cov'? | [
"sarsr-cov (severe acute respiratory syndrome-related coronavirus)",
"sarsrcov (severe acute respiratory syndrome-related coronavirus)",
"sars-related coronavirus (severe acute respiratory syndrome-related coronavirus)",
"hcov-sars (severe acute respiratory syndrome-related coronavirus)",
"severe acute resp... | [
"sars-cov (severe acute respiratory syndrome coronavirus)",
"sars virus (severe acute respiratory syndrome coronavirus)",
"sars coronavirus (severe acute respiratory syndrome coronavirus)",
"severe acute respiratory syndrome coronavirus (sars coronavirus)"
] | Given the context 'We then compared the efficacies of vaccines bearing attenuated (VRP(3014)) or wild-type VEE glycoproteins (VRP(3000)) in young and aged mice within novel models of severe SARS-CoV pathogenesis.', answer the user's query. |
What is the biomedical concept corresponding to 'sars-cov'? | [
"sarsr-cov (severe acute respiratory syndrome-related coronavirus)",
"sarsrcov (severe acute respiratory syndrome-related coronavirus)",
"sars-related coronavirus (severe acute respiratory syndrome-related coronavirus)",
"hcov-sars (severe acute respiratory syndrome-related coronavirus)",
"severe acute resp... | [
"sars-cov (severe acute respiratory syndrome coronavirus)",
"sars virus (severe acute respiratory syndrome coronavirus)",
"sars coronavirus (severe acute respiratory syndrome coronavirus)",
"severe acute respiratory syndrome coronavirus (sars coronavirus)"
] | Given the context 'Aged animals receiving VRP(3000)-based vaccines were protected from SARS-CoV disease, while animals receiving the VRP(3014)-based vaccines were not.', answer the user's query. |
What is the biomedical concept corresponding to 'west nile virus'? | [
"west nile virus (wnv (west nile virus))",
"wnv (west nile virus) (west nile virus)"
] | [
"west nile virus 1 (west nile virus lineage 1)",
"northway virus",
"west nile virus lineage 1 (west nile virus 1)",
"kunjin virus (west nile virus - kunjin)"
] | Given the context 'Exploration into the mechanism(s) of successful vaccination in the immunosenescent should aid in the development of successful vaccine strategies for other viral diseases disproportionately affecting the elderly, like West Nile virus, influenza virus, norovirus, or other emerging viruses of the future.
', answer the user's query. |
What is the biomedical concept corresponding to 'hepatitis c virus'? | [
"hepatitis c virus (hepacivirus hominis)",
"human hepatitis c virus (hepacivirus hominis)",
"hepatitis c virus hcv (hepacivirus hominis)",
"human hepatitis c virus hcv (hepacivirus hominis)",
"human hepatitis virus c hcv (hepacivirus hominis)"
] | [
"hepatitis c viruses (hepacivirus)",
"human hepatitis b virus (hepatitis b virus)",
"hepatitis a virus (hepatovirus a)",
"hepatitis b virus, hbv (hepatitis b virus)"
] | Given the context 'Neutralizing antibody-resistant hepatitis C virus cell-to-cell transmission.
', answer the user's query. |
What is the biomedical concept corresponding to 'hcv'? | [
"hepatitis c virus hcv (hepacivirus hominis)",
"human hepatitis c virus hcv (hepacivirus hominis)",
"human hepatitis virus c hcv (hepacivirus hominis)",
"hepatitis c virus (hepacivirus hominis)",
"human hepatitis c virus (hepacivirus hominis)"
] | [
"hepatitis c viruses (hepacivirus)",
"hcv-h (hepatitis c virus (isolate h))",
"hepatitis c-like viruses (hepacivirus)",
"human hepatitis circovirus"
] | Given the context 'Hepatitis C virus (HCV) can initiate infection by cell-free particle and cell-cell contact-dependent transmission.', answer the user's query. |
What is the biomedical concept corresponding to 'anti-hcv'? | [
"hepatitis c virus hcv (hepacivirus hominis)",
"human hepatitis c virus hcv (hepacivirus hominis)",
"human hepatitis virus c hcv (hepacivirus hominis)"
] | [
"antichaacvirus",
"anticheira",
"antichiropus antius",
"recombinant hcv viruses"
] | Given the context 'Cell-to-cell transmission is relatively resistant to anti-HCV glycoprotein monoclonal antibodies and polyclonal immunoglobulin isolated from infected individuals, providing an effective strategy for escaping host humoral immune responses.', answer the user's query. |
What is the biomedical concept corresponding to 'hcv'? | [
"hepatitis c virus hcv (hepacivirus hominis)",
"human hepatitis c virus hcv (hepacivirus hominis)",
"human hepatitis virus c hcv (hepacivirus hominis)",
"hepatitis c virus (hepacivirus hominis)",
"human hepatitis c virus (hepacivirus hominis)"
] | [
"hepatitis c viruses (hepacivirus)",
"hcv-h (hepatitis c virus (isolate h))",
"hepatitis c-like viruses (hepacivirus)",
"human hepatitis circovirus"
] | Given the context 'Chimeric viruses expressing the structural proteins representing the seven major HCV genotypes demonstrate neutralizing antibody-resistant cell-to-cell transmission.', answer the user's query. |
What is the biomedical concept corresponding to 'hcv'? | [
"hepatitis c virus hcv (hepacivirus hominis)",
"human hepatitis c virus hcv (hepacivirus hominis)",
"human hepatitis virus c hcv (hepacivirus hominis)",
"hepatitis c virus (hepacivirus hominis)",
"human hepatitis c virus (hepacivirus hominis)"
] | [
"hepatitis c viruses (hepacivirus)",
"hcv-h (hepatitis c virus (isolate h))",
"hepatitis c-like viruses (hepacivirus)",
"human hepatitis circovirus"
] | Given the context 'HCV entry is a multistep process involving numerous receptors.', answer the user's query. |
What is the biomedical concept corresponding to 'mammalian orthoreoviruses'? | [
"mammalian orthoreovirus"
] | [
"orthoreovirus (reoviruses)",
"reoviruses (orthoreovirus)",
"mammalian orthoreovirus type 2 (mammalian orthoreovirus 2)",
"mammalian orthoreovirus 1 (reovirus type 1)"
] | Given the context 'Reovirus infection or ectopic expression of outer capsid protein micro1 induces apoptosis independently of the cellular proapoptotic proteins Bax and Bak.
Mammalian orthoreoviruses induce apoptosis in vivo and in vitro; however, the specific mechanism by which apoptosis is induced is not fully understood.', answer the user's query. |
What is the biomedical concept corresponding to 'mouse'? | [
"mouse (mus musculus)",
"mus musculus (house mouse)",
"house mouse (mus musculus)"
] | [
"mouse (mus <genus>)",
"mus musculus musculus (eastern european house mouse)",
"western european house mouse (mus musculus domesticus)",
"mus musculus domesticus (western european house mouse)"
] | Given the context 'Additionally, mu1- or reovirus-induced release of cytochrome c occurred efficiently in Bax(-/-)Bak(-/-) mouse embryonic fibroblasts (MEFs).', answer the user's query. |
What is the biomedical concept corresponding to 'chikungunya virus'? | [
"chikungunya virus"
] | [
"chijiahe virus",
"chikungunya virus strain nagpur",
"chize virus",
"chiba virus"
] | Given the context 'Chikungunya virus induces IPS-1-dependent innate immune activation and protein kinase R-independent translational shutoff.
Chikungunya virus (CHIKV) is an arthritogenic mosquito-transmitted alphavirus that is undergoing reemergence in areas around the Indian Ocean.', answer the user's query. |
What is the biomedical concept corresponding to 'chikungunya virus'? | [
"chikungunya virus"
] | [
"chijiahe virus",
"chikungunya virus strain nagpur",
"chize virus",
"chiba virus"
] | Given the context 'Chikungunya virus induces IPS-1-dependent innate immune activation and protein kinase R-independent translational shutoff.
Chikungunya virus (CHIKV) is an arthritogenic mosquito-transmitted alphavirus that is undergoing reemergence in areas around the Indian Ocean.', answer the user's query. |
What is the biomedical concept corresponding to 'chikv'? | [
"chikungunya virus"
] | [
"chiba virus",
"crimean-congo hemorrhagic fever virus (orthonairovirus haemorrhagiae)",
"crimean-congo haemorrhagic fever virus (orthonairovirus haemorrhagiae)",
"chikungunya virus strain nagpur"
] | Given the context 'Chikungunya virus induces IPS-1-dependent innate immune activation and protein kinase R-independent translational shutoff.
Chikungunya virus (CHIKV) is an arthritogenic mosquito-transmitted alphavirus that is undergoing reemergence in areas around the Indian Ocean.', answer the user's query. |
What is the biomedical concept corresponding to 'chikv'? | [
"chikungunya virus"
] | [
"chiba virus",
"crimean-congo hemorrhagic fever virus (orthonairovirus haemorrhagiae)",
"crimean-congo haemorrhagic fever virus (orthonairovirus haemorrhagiae)",
"chikungunya virus strain nagpur"
] | Given the context 'Despite the current and potential danger posed by this virus, we know surprisingly little about the induction and evasion of CHIKV-associated antiviral immune responses.', answer the user's query. |
What is the biomedical concept corresponding to 'chikv'? | [
"chikungunya virus"
] | [
"chiba virus",
"crimean-congo hemorrhagic fever virus (orthonairovirus haemorrhagiae)",
"crimean-congo haemorrhagic fever virus (orthonairovirus haemorrhagiae)",
"chikungunya virus strain nagpur"
] | Given the context 'With this in mind we investigated innate immune reactions to CHIKV in human fibroblasts, a demonstrable in vivo target of virus replication and spread.', answer the user's query. |
What is the biomedical concept corresponding to 'human'? | [
"human (homo sapiens)",
"homo sapiens (human)"
] | [
"humans (homo)",
"homo (humans)",
"macrobiotus sapiens",
"glossus humanus (cardium humanum)"
] | Given the context 'With this in mind we investigated innate immune reactions to CHIKV in human fibroblasts, a demonstrable in vivo target of virus replication and spread.', answer the user's query. |
What is the biomedical concept corresponding to 'chikv'? | [
"chikungunya virus"
] | [
"chiba virus",
"crimean-congo hemorrhagic fever virus (orthonairovirus haemorrhagiae)",
"crimean-congo haemorrhagic fever virus (orthonairovirus haemorrhagiae)",
"chikungunya virus strain nagpur"
] | Given the context 'We show that CHIKV infection leads to activation of the transcription factor interferon regulatory factor 3 (IRF3) and subsequent transcription of IRF3-dependent antiviral genes, including beta interferon (IFN-Beta).', answer the user's query. |
What is the biomedical concept corresponding to 'chikv'? | [
"chikungunya virus"
] | [
"chiba virus",
"crimean-congo hemorrhagic fever virus (orthonairovirus haemorrhagiae)",
"crimean-congo haemorrhagic fever virus (orthonairovirus haemorrhagiae)",
"chikungunya virus strain nagpur"
] | Given the context 'We further demonstrate that translation of cellular (but not viral) genes is blocked during infection and that although CHIKV is found to trigger inactivation of the translational molecule eukaryotic initiation factor subunit 2alpha by way of the double-stranded RNA sensor protein kinase R, this response is not required for the block to protein synthesis.', answer the user's query. |
What is the biomedical concept corresponding to 'chikv'? | [
"chikungunya virus"
] | [
"chiba virus",
"crimean-congo hemorrhagic fever virus (orthonairovirus haemorrhagiae)",
"crimean-congo haemorrhagic fever virus (orthonairovirus haemorrhagiae)",
"chikungunya virus strain nagpur"
] | Given the context 'Furthermore, overall diminution of cellular RNA synthesis is also observed in the presence of CHIKV and transcription of IRF3-dependent antiviral genes appears specifically blocked late in infection.', answer the user's query. |
What is the biomedical concept corresponding to 'chikv'? | [
"chikungunya virus"
] | [
"chiba virus",
"crimean-congo hemorrhagic fever virus (orthonairovirus haemorrhagiae)",
"crimean-congo haemorrhagic fever virus (orthonairovirus haemorrhagiae)",
"chikungunya virus strain nagpur"
] | Given the context 'We hypothesize that the observed absence of IFN-Beta and antiviral proteins during infection results from an evasion mechanism exhibited by CHIKV that is dependent on widespread shutoff of cellular protein synthesis and a targeted block to late synthesis of antiviral mRNA transcripts.
', answer the user's query. |
What is the biomedical concept corresponding to 'vesicular stomatitis virus'? | [
"vesicular stomatitis virus (vesicular stomatitis virus, vsv)",
"vesicular stomatitis virus, vsv (vesicular stomatitis virus)",
"vesicular stomatitis virus vsv (vesicular stomatitis virus)"
] | [
"vesicular stomatitis indiana virus (vsiv (vesicular stomatitis indiana virus))",
"vesicular stomatitis alagoas virus (vsav (vesicular stomatitis alagoas virus))",
"vsiv (vesicular stomatitis indiana virus) (vesicular stomatitis indiana virus)",
"swine vesicular disease virus"
] | Given the context 'Dominant inhibition of Akt/protein kinase B signaling by the matrix protein of a negative-strand RNA virus.
Vesicular stomatitis virus (VSV) is a rhabdovirus that alters host nuclear and cytoplasmic function upon infection.', answer the user's query. |
What is the biomedical concept corresponding to 'vsv'? | [
"vesicular stomatitis virus, vsv (vesicular stomatitis virus)",
"vesicular stomatitis virus (vesicular stomatitis virus, vsv)",
"vesicular stomatitis virus vsv (vesicular stomatitis virus)"
] | [
"vesicular stomatitis alagoas virus (vsav (vesicular stomatitis alagoas virus))",
"vesicular stomatitis indiana virus (vsiv (vesicular stomatitis indiana virus))",
"swine vesicular disease virus",
"vsiv (vesicular stomatitis indiana virus) (vesicular stomatitis indiana virus)"
] | Given the context 'Dominant inhibition of Akt/protein kinase B signaling by the matrix protein of a negative-strand RNA virus.
Vesicular stomatitis virus (VSV) is a rhabdovirus that alters host nuclear and cytoplasmic function upon infection.', answer the user's query. |
What is the biomedical concept corresponding to 'vsv'? | [
"vesicular stomatitis virus, vsv (vesicular stomatitis virus)",
"vesicular stomatitis virus (vesicular stomatitis virus, vsv)",
"vesicular stomatitis virus vsv (vesicular stomatitis virus)"
] | [
"vesicular stomatitis alagoas virus (vsav (vesicular stomatitis alagoas virus))",
"vesicular stomatitis indiana virus (vsiv (vesicular stomatitis indiana virus))",
"swine vesicular disease virus",
"vsiv (vesicular stomatitis indiana virus) (vesicular stomatitis indiana virus)"
] | Given the context 'We have investigated the effect of VSV infection on cellular signaling through the phosphatidylinositol-3 kinase (PI3k)/Akt signaling pathway.', answer the user's query. |
What is the biomedical concept corresponding to 'vsv'? | [
"vesicular stomatitis virus, vsv (vesicular stomatitis virus)",
"vesicular stomatitis virus (vesicular stomatitis virus, vsv)",
"vesicular stomatitis virus vsv (vesicular stomatitis virus)"
] | [
"vesicular stomatitis alagoas virus (vsav (vesicular stomatitis alagoas virus))",
"vesicular stomatitis indiana virus (vsiv (vesicular stomatitis indiana virus))",
"swine vesicular disease virus",
"vsiv (vesicular stomatitis indiana virus) (vesicular stomatitis indiana virus)"
] | Given the context 'Akt phosphorylation at both threonine 308 (Thr308) and serine 473 (Ser473) was inhibited in cells infected with VSV.', answer the user's query. |
What is the biomedical concept corresponding to 'vsv'? | [
"vesicular stomatitis virus, vsv (vesicular stomatitis virus)",
"vesicular stomatitis virus (vesicular stomatitis virus, vsv)",
"vesicular stomatitis virus vsv (vesicular stomatitis virus)"
] | [
"vesicular stomatitis alagoas virus (vsav (vesicular stomatitis alagoas virus))",
"vesicular stomatitis indiana virus (vsiv (vesicular stomatitis indiana virus))",
"swine vesicular disease virus",
"vsiv (vesicular stomatitis indiana virus) (vesicular stomatitis indiana virus)"
] | Given the context 'These data illustrate that VSV utilizes a novel mechanism to alter this central player in cell signaling and oncogenesis.', answer the user's query. |
What is the biomedical concept corresponding to 'vsv'? | [
"vesicular stomatitis virus, vsv (vesicular stomatitis virus)",
"vesicular stomatitis virus (vesicular stomatitis virus, vsv)",
"vesicular stomatitis virus vsv (vesicular stomatitis virus)"
] | [
"vesicular stomatitis alagoas virus (vsav (vesicular stomatitis alagoas virus))",
"vesicular stomatitis indiana virus (vsiv (vesicular stomatitis indiana virus))",
"swine vesicular disease virus",
"vsiv (vesicular stomatitis indiana virus) (vesicular stomatitis indiana virus)"
] | Given the context 'It also suggests an inside-out model of signal transduction where VSV interruption of nuclear events has a rapid and significant effect on membrane signaling events.
', answer the user's query. |
What is the biomedical concept corresponding to 'hiv-1'? | [
"hiv-1 (human immunodeficiency virus 1)",
"human immunodeficiency virus type 1, hiv-1 (human immunodeficiency virus 1)",
"hiv1 (human immunodeficiency virus 1) (human immunodeficiency virus 1)",
"human immunodeficiency virus-1 hiv-1 (human immunodeficiency virus 1)",
"human immunodeficiency virus 1 hiv-1 (h... | [
"human immunodeficiency virus (hiv (human immunodeficiency virus))",
"hiv (human immunodeficiency virus) (human immunodeficiency virus)",
"aids virus (human immunodeficiency virus)",
"human immunodeficiency virus type 1 (kb-1 isolate)"
] | Given the context 'Serine-threonine ubiquitination mediates downregulation of BST-2/tetherin and relief of restricted virion release by HIV-1 Vpu.
', answer the user's query. |
What is the biomedical concept corresponding to 'hiv-1'? | [
"hiv-1 (human immunodeficiency virus 1)",
"human immunodeficiency virus type 1, hiv-1 (human immunodeficiency virus 1)",
"hiv1 (human immunodeficiency virus 1) (human immunodeficiency virus 1)",
"human immunodeficiency virus-1 hiv-1 (human immunodeficiency virus 1)",
"human immunodeficiency virus 1 hiv-1 (h... | [
"human immunodeficiency virus (hiv (human immunodeficiency virus))",
"hiv (human immunodeficiency virus) (human immunodeficiency virus)",
"aids virus (human immunodeficiency virus)",
"human immunodeficiency virus type 1 (kb-1 isolate)"
] | Given the context 'The HIV-1 protein Vpu counteracts the antiviral activity of the innate restriction factor BST-2/tetherin by a mechanism that partly depends on its interaction with Beta-TrCP, a substrate adaptor for an SCF (Skp-Cullin 1-F box) E3 ubiquitin ligase complex.', answer the user's query. |
What is the biomedical concept corresponding to 'varicella-zoster virus'? | [
"varicella-zoster virus (human alphaherpesvirus 3)",
"varicella zoster virus (human alphaherpesvirus 3)",
"varicella-zoster virus vzv (human alphaherpesvirus 3)",
"varicella zoster virus vzv (human alphaherpesvirus 3)",
"vzv (human alphaherpesvirus 3) (human alphaherpesvirus 3)"
] | [
"smallpox virus (variola virus)",
"varicella-zoster virus (strain dumas) (human herpesvirus 3 strain dumas)",
"simian varicella virus (cercopithecine alphaherpesvirus 9)",
"smallpox (variola virus)"
] | Given the context 'Varicella-zoster virus glycoprotein E is a critical determinant of virulence in the SCID mouse-human model of neuropathogenesis.
Varicella-zoster virus (VZV) is a neurotropic alphaherpesvirus.', answer the user's query. |
What is the biomedical concept corresponding to 'human'? | [
"human (homo sapiens)",
"homo sapiens (human)"
] | [
"humans (homo)",
"homo (humans)",
"macrobiotus sapiens",
"glossus humanus (cardium humanum)"
] | Given the context 'Varicella-zoster virus glycoprotein E is a critical determinant of virulence in the SCID mouse-human model of neuropathogenesis.
Varicella-zoster virus (VZV) is a neurotropic alphaherpesvirus.', answer the user's query. |
What is the biomedical concept corresponding to 'varicella-zoster virus'? | [
"varicella-zoster virus (human alphaherpesvirus 3)",
"varicella zoster virus (human alphaherpesvirus 3)",
"varicella-zoster virus vzv (human alphaherpesvirus 3)",
"varicella zoster virus vzv (human alphaherpesvirus 3)",
"vzv (human alphaherpesvirus 3) (human alphaherpesvirus 3)"
] | [
"smallpox virus (variola virus)",
"varicella-zoster virus (strain dumas) (human herpesvirus 3 strain dumas)",
"simian varicella virus (cercopithecine alphaherpesvirus 9)",
"smallpox (variola virus)"
] | Given the context 'Varicella-zoster virus glycoprotein E is a critical determinant of virulence in the SCID mouse-human model of neuropathogenesis.
Varicella-zoster virus (VZV) is a neurotropic alphaherpesvirus.', answer the user's query. |
What is the biomedical concept corresponding to 'vzv'? | [
"varicella-zoster virus vzv (human alphaherpesvirus 3)",
"varicella zoster virus vzv (human alphaherpesvirus 3)",
"vzv (human alphaherpesvirus 3) (human alphaherpesvirus 3)",
"varicella-zoster virus (human alphaherpesvirus 3)",
"varicella zoster virus (human alphaherpesvirus 3)"
] | [
"varicellaria",
"variola",
"human herpesvirus 3 vzv-32",
"human herpesvirus 3 strain dumas (varicella-zoster virus (strain dumas))"
] | Given the context 'Varicella-zoster virus glycoprotein E is a critical determinant of virulence in the SCID mouse-human model of neuropathogenesis.
Varicella-zoster virus (VZV) is a neurotropic alphaherpesvirus.', answer the user's query. |
What is the biomedical concept corresponding to 'vzv'? | [
"varicella-zoster virus vzv (human alphaherpesvirus 3)",
"varicella zoster virus vzv (human alphaherpesvirus 3)",
"vzv (human alphaherpesvirus 3) (human alphaherpesvirus 3)",
"varicella-zoster virus (human alphaherpesvirus 3)",
"varicella zoster virus (human alphaherpesvirus 3)"
] | [
"varicellaria",
"variola",
"human herpesvirus 3 vzv-32",
"human herpesvirus 3 strain dumas (varicella-zoster virus (strain dumas))"
] | Given the context 'VZV infection of human dorsal root ganglion (DRG) xenografts in immunodeficient mice models the infection of sensory ganglia.', answer the user's query. |
What is the biomedical concept corresponding to 'human'? | [
"human (homo sapiens)",
"homo sapiens (human)"
] | [
"humans (homo)",
"homo (humans)",
"macrobiotus sapiens",
"glossus humanus (cardium humanum)"
] | Given the context 'VZV infection of human dorsal root ganglion (DRG) xenografts in immunodeficient mice models the infection of sensory ganglia.', answer the user's query. |
What is the biomedical concept corresponding to 'vzv'? | [
"varicella-zoster virus vzv (human alphaherpesvirus 3)",
"varicella zoster virus vzv (human alphaherpesvirus 3)",
"vzv (human alphaherpesvirus 3) (human alphaherpesvirus 3)",
"varicella-zoster virus (human alphaherpesvirus 3)",
"varicella zoster virus (human alphaherpesvirus 3)"
] | [
"varicellaria",
"variola",
"human herpesvirus 3 vzv-32",
"human herpesvirus 3 strain dumas (varicella-zoster virus (strain dumas))"
] | Given the context 'We examined DRG infection with recombinant VZV (recombinant Oka [rOka]) and the following gE mutants: gEDelta27-90, gEDeltaCys, gE-AYRV, and gE-SSTT.', answer the user's query. |
What is the biomedical concept corresponding to 'lassa virus'? | [
"lassa virus (mammarenavirus lassaense)"
] | [
"langya virus (langya henipavirus)",
"swine influenza virus",
"langya henipavirus (langya virus)",
"las maloyas virus"
] | Given the context 'Domain structure of Lassa virus L protein.
', answer the user's query. |
What is the biomedical concept corresponding to 'lassa virus'? | [
"lassa virus (mammarenavirus lassaense)"
] | [
"langya virus (langya henipavirus)",
"swine influenza virus",
"langya henipavirus (langya virus)",
"las maloyas virus"
] | Given the context 'This study aimed at providing evidence for the domain structure of L protein by combining bioinformatics with a stepwise mutagenesis approach using the Lassa virus minireplicon system.', answer the user's query. |
What is the biomedical concept corresponding to 'lassa virus av'? | [
"lassa virus (mammarenavirus lassaense)"
] | [
"las maloyas virus",
"langya virus (langya henipavirus)",
"little sussex virus",
"gill-associated virus"
] | Given the context 'Insertion of 5 or 10 amino acid residues was tolerated at seven sites (S407, G446, G467, G774, G939, S1952, and V2074 in Lassa virus AV).', answer the user's query. |
What is the biomedical concept corresponding to 'lassa virus'? | [
"lassa virus (mammarenavirus lassaense)"
] | [
"langya virus (langya henipavirus)",
"swine influenza virus",
"langya henipavirus (langya virus)",
"las maloyas virus"
] | Given the context 'In conclusion, this study demonstrates two interdomain linkers in Lassa virus L protein, at G467 and G939, suggesting that L protein is composed of at least three structural domains spanning residues 1 to 467, 467 to 939, and 939 to 2220.', answer the user's query. |
What is the biomedical concept corresponding to 'human immunodeficiency virus type 1'? | [
"human immunodeficiency virus type 1 (human immunodeficiency virus 1)",
"human immunodeficiency virus hiv-1 (human immunodeficiency virus 1)",
"human immunodeficiency virus type 1, hiv-1 (human immunodeficiency virus 1)",
"hiv-1 (human immunodeficiency virus 1)",
"human immunodeficiency virus 1 (human immun... | [
"human immunodeficiency virus (hiv (human immunodeficiency virus))",
"hiv (human immunodeficiency virus) (human immunodeficiency virus)",
"aids virus (human immunodeficiency virus)",
"human immunodeficiency virus type 1 (new york-5 isolate)"
] | Given the context 'Small-molecule inhibition of human immunodeficiency virus type 1 infection by virus capsid destabilization.
Human immunodeficiency virus type 1 (HIV-1) infection is dependent on the proper disassembly of the viral capsid, or "uncoating," in target cells.', answer the user's query. |
What is the biomedical concept corresponding to 'human immunodeficiency virus type 1'? | [
"human immunodeficiency virus type 1 (human immunodeficiency virus 1)",
"human immunodeficiency virus hiv-1 (human immunodeficiency virus 1)",
"human immunodeficiency virus type 1, hiv-1 (human immunodeficiency virus 1)",
"hiv-1 (human immunodeficiency virus 1)",
"human immunodeficiency virus 1 (human immun... | [
"human immunodeficiency virus (hiv (human immunodeficiency virus))",
"hiv (human immunodeficiency virus) (human immunodeficiency virus)",
"aids virus (human immunodeficiency virus)",
"human immunodeficiency virus type 1 (new york-5 isolate)"
] | Given the context 'Small-molecule inhibition of human immunodeficiency virus type 1 infection by virus capsid destabilization.
Human immunodeficiency virus type 1 (HIV-1) infection is dependent on the proper disassembly of the viral capsid, or "uncoating," in target cells.', answer the user's query. |
What is the biomedical concept corresponding to 'hiv-1'? | [
"hiv-1 (human immunodeficiency virus 1)",
"human immunodeficiency virus type 1, hiv-1 (human immunodeficiency virus 1)",
"hiv1 (human immunodeficiency virus 1) (human immunodeficiency virus 1)",
"human immunodeficiency virus-1 hiv-1 (human immunodeficiency virus 1)",
"human immunodeficiency virus 1 hiv-1 (h... | [
"human immunodeficiency virus (hiv (human immunodeficiency virus))",
"hiv (human immunodeficiency virus) (human immunodeficiency virus)",
"aids virus (human immunodeficiency virus)",
"human immunodeficiency virus type 1 (kb-1 isolate)"
] | Given the context 'Small-molecule inhibition of human immunodeficiency virus type 1 infection by virus capsid destabilization.
Human immunodeficiency virus type 1 (HIV-1) infection is dependent on the proper disassembly of the viral capsid, or "uncoating," in target cells.', answer the user's query. |
What is the biomedical concept corresponding to 'hiv-1'? | [
"hiv-1 (human immunodeficiency virus 1)",
"human immunodeficiency virus type 1, hiv-1 (human immunodeficiency virus 1)",
"hiv1 (human immunodeficiency virus 1) (human immunodeficiency virus 1)",
"human immunodeficiency virus-1 hiv-1 (human immunodeficiency virus 1)",
"human immunodeficiency virus 1 hiv-1 (h... | [
"human immunodeficiency virus (hiv (human immunodeficiency virus))",
"hiv (human immunodeficiency virus) (human immunodeficiency virus)",
"aids virus (human immunodeficiency virus)",
"human immunodeficiency virus type 1 (kb-1 isolate)"
] | Given the context 'The HIV-1 capsid consists of a conical multimeric complex of the viral capsid protein (CA) arranged in a hexagonal lattice.', answer the user's query. |
What is the biomedical concept corresponding to 'hiv-1'? | [
"hiv-1 (human immunodeficiency virus 1)",
"human immunodeficiency virus type 1, hiv-1 (human immunodeficiency virus 1)",
"hiv1 (human immunodeficiency virus 1) (human immunodeficiency virus 1)",
"human immunodeficiency virus-1 hiv-1 (human immunodeficiency virus 1)",
"human immunodeficiency virus 1 hiv-1 (h... | [
"human immunodeficiency virus (hiv (human immunodeficiency virus))",
"hiv (human immunodeficiency virus) (human immunodeficiency virus)",
"aids virus (human immunodeficiency virus)",
"human immunodeficiency virus type 1 (kb-1 isolate)"
] | Given the context 'We describe here the mechanism of action of a small molecule HIV-1 inhibitor, PF-3450074 (PF74), which targets CA.', answer the user's query. |
What is the biomedical concept corresponding to 'hiv-1'? | [
"hiv-1 (human immunodeficiency virus 1)",
"human immunodeficiency virus type 1, hiv-1 (human immunodeficiency virus 1)",
"hiv1 (human immunodeficiency virus 1) (human immunodeficiency virus 1)",
"human immunodeficiency virus-1 hiv-1 (human immunodeficiency virus 1)",
"human immunodeficiency virus 1 hiv-1 (h... | [
"human immunodeficiency virus (hiv (human immunodeficiency virus))",
"hiv (human immunodeficiency virus) (human immunodeficiency virus)",
"aids virus (human immunodeficiency virus)",
"human immunodeficiency virus type 1 (kb-1 isolate)"
] | Given the context 'PF74 acts at an early stage of HIV-1 infection and inhibits reverse transcription in target cells.', answer the user's query. |
What is the biomedical concept corresponding to 'hiv-1'? | [
"hiv-1 (human immunodeficiency virus 1)",
"human immunodeficiency virus type 1, hiv-1 (human immunodeficiency virus 1)",
"hiv1 (human immunodeficiency virus 1) (human immunodeficiency virus 1)",
"human immunodeficiency virus-1 hiv-1 (human immunodeficiency virus 1)",
"human immunodeficiency virus 1 hiv-1 (h... | [
"human immunodeficiency virus (hiv (human immunodeficiency virus))",
"hiv (human immunodeficiency virus) (human immunodeficiency virus)",
"aids virus (human immunodeficiency virus)",
"human immunodeficiency virus type 1 (kb-1 isolate)"
] | Given the context 'We show that PF74 binds specifically to HIV-1 particles, and substitutions in CA that confer resistance to the compound prevent binding.', answer the user's query. |
What is the biomedical concept corresponding to 'hiv-1'? | [
"hiv-1 (human immunodeficiency virus 1)",
"human immunodeficiency virus type 1, hiv-1 (human immunodeficiency virus 1)",
"hiv1 (human immunodeficiency virus 1) (human immunodeficiency virus 1)",
"human immunodeficiency virus-1 hiv-1 (human immunodeficiency virus 1)",
"human immunodeficiency virus 1 hiv-1 (h... | [
"human immunodeficiency virus (hiv (human immunodeficiency virus))",
"hiv (human immunodeficiency virus) (human immunodeficiency virus)",
"aids virus (human immunodeficiency virus)",
"human immunodeficiency virus type 1 (kb-1 isolate)"
] | Given the context 'A single point mutation in CA that stabilizes the HIV-1 core also conferred strong resistance to the virus without inhibiting compound binding.', answer the user's query. |
What is the biomedical concept corresponding to 'hiv-1'? | [
"hiv-1 (human immunodeficiency virus 1)",
"human immunodeficiency virus type 1, hiv-1 (human immunodeficiency virus 1)",
"hiv1 (human immunodeficiency virus 1) (human immunodeficiency virus 1)",
"human immunodeficiency virus-1 hiv-1 (human immunodeficiency virus 1)",
"human immunodeficiency virus 1 hiv-1 (h... | [
"human immunodeficiency virus (hiv (human immunodeficiency virus))",
"hiv (human immunodeficiency virus) (human immunodeficiency virus)",
"aids virus (human immunodeficiency virus)",
"human immunodeficiency virus type 1 (kb-1 isolate)"
] | Given the context 'Treatment of HIV-1 particles or purified cores with PF74 destabilized the viral capsid in vitro.', answer the user's query. |
What is the biomedical concept corresponding to 'hiv-1'? | [
"hiv-1 (human immunodeficiency virus 1)",
"human immunodeficiency virus type 1, hiv-1 (human immunodeficiency virus 1)",
"hiv1 (human immunodeficiency virus 1) (human immunodeficiency virus 1)",
"human immunodeficiency virus-1 hiv-1 (human immunodeficiency virus 1)",
"human immunodeficiency virus 1 hiv-1 (h... | [
"human immunodeficiency virus (hiv (human immunodeficiency virus))",
"hiv (human immunodeficiency virus) (human immunodeficiency virus)",
"aids virus (human immunodeficiency virus)",
"human immunodeficiency virus type 1 (kb-1 isolate)"
] | Given the context 'Furthermore, the compound induced the rapid dissolution of the HIV-1 capsid in target cells.', answer the user's query. |
What is the biomedical concept corresponding to 'hiv-1'? | [
"hiv-1 (human immunodeficiency virus 1)",
"human immunodeficiency virus type 1, hiv-1 (human immunodeficiency virus 1)",
"hiv1 (human immunodeficiency virus 1) (human immunodeficiency virus 1)",
"human immunodeficiency virus-1 hiv-1 (human immunodeficiency virus 1)",
"human immunodeficiency virus 1 hiv-1 (h... | [
"human immunodeficiency virus (hiv (human immunodeficiency virus))",
"hiv (human immunodeficiency virus) (human immunodeficiency virus)",
"aids virus (human immunodeficiency virus)",
"human immunodeficiency virus type 1 (kb-1 isolate)"
] | Given the context 'PF74 antiviral activity was promoted by binding of the host protein cyclophilin A to the HIV-1 capsid, and PF74 and cyclosporine exhibited mutual antagonism.', answer the user's query. |
What is the biomedical concept corresponding to 'hiv-1'? | [
"hiv-1 (human immunodeficiency virus 1)",
"human immunodeficiency virus type 1, hiv-1 (human immunodeficiency virus 1)",
"hiv1 (human immunodeficiency virus 1) (human immunodeficiency virus 1)",
"human immunodeficiency virus-1 hiv-1 (human immunodeficiency virus 1)",
"human immunodeficiency virus 1 hiv-1 (h... | [
"human immunodeficiency virus (hiv (human immunodeficiency virus))",
"hiv (human immunodeficiency virus) (human immunodeficiency virus)",
"aids virus (human immunodeficiency virus)",
"human immunodeficiency virus type 1 (kb-1 isolate)"
] | Given the context 'Our data suggest that PF74 triggers premature HIV-1 uncoating in target cells, thereby mimicking the activity of the retrovirus restriction factor TRIM5alpha.', answer the user's query. |
What is the biomedical concept corresponding to 'hiv-1'? | [
"hiv-1 (human immunodeficiency virus 1)",
"human immunodeficiency virus type 1, hiv-1 (human immunodeficiency virus 1)",
"hiv1 (human immunodeficiency virus 1) (human immunodeficiency virus 1)",
"human immunodeficiency virus-1 hiv-1 (human immunodeficiency virus 1)",
"human immunodeficiency virus 1 hiv-1 (h... | [
"human immunodeficiency virus (hiv (human immunodeficiency virus))",
"hiv (human immunodeficiency virus) (human immunodeficiency virus)",
"aids virus (human immunodeficiency virus)",
"human immunodeficiency virus type 1 (kb-1 isolate)"
] | Given the context 'This study highlights uncoating as a step in the HIV-1 life cycle that is susceptible to small molecule intervention.
', answer the user's query. |
What is the biomedical concept corresponding to 'mice'? | [
"mouse (mus musculus)",
"house mouse (mus musculus)",
"mus musculus (house mouse)"
] | [
"mouse (mus <genus>)",
"mus musculus musculus (eastern european house mouse)",
"mice (mus <genus>) (mus <genus>)",
"western european house mouse (mus musculus domesticus)"
] | Given the context 'Mice lacking both B7.1 and B7.2 showed reduced early expansion of CMV-specific CD4 T cells, consequently allowing for enhanced levels of persistent virus replication.', answer the user's query. |
What is the biomedical concept corresponding to 'hepatitis b virus'? | [
"human hepatitis b virus (hepatitis b virus)",
"hepatitis b virus, hbv (hepatitis b virus)",
"hepatitis b virus hbv (hepatitis b virus)",
"hepatitis b virus (hbv) (hepatitis b virus)",
"hbv (hepatitis b virus) (hepatitis b virus)"
] | [
"hepatitis gb virus b (gb virus-b)",
"hepatitis b virus 2",
"duck hepatitis b virus (dhbv (duck hepatitis b virus))",
"horseshoe bat hepatitis b virus (hbhbv)"
] | Given the context 'Novel F141L pre-S2 mutation in hepatitis B virus increases the risk of hepatocellular carcinoma in patients with chronic genotype C infections.
', answer the user's query. |
What is the biomedical concept corresponding to 'hepatitis b virus'? | [
"human hepatitis b virus (hepatitis b virus)",
"hepatitis b virus, hbv (hepatitis b virus)",
"hepatitis b virus hbv (hepatitis b virus)",
"hepatitis b virus (hbv) (hepatitis b virus)",
"hbv (hepatitis b virus) (hepatitis b virus)"
] | [
"hepatitis gb virus b (gb virus-b)",
"hepatitis b virus 2",
"duck hepatitis b virus (dhbv (duck hepatitis b virus))",
"horseshoe bat hepatitis b virus (hbhbv)"
] | Given the context 'Several lines of evidence have suggested that some naturally occurring mutations of hepatitis B virus (HBV) play a critical role in hepatocellular carcinoma (HCC).', answer the user's query. |
What is the biomedical concept corresponding to 'hbv'? | [
"hepatitis b virus, hbv (hepatitis b virus)",
"hbv (hepatitis b virus) (hepatitis b virus)",
"hepatitis b virus (hbv) (hepatitis b virus)",
"hepatitis b virus hbv (hepatitis b virus)",
"human hepatitis b virus hbv (hepatitis b virus)"
] | [
"non-human hbv",
"duck hepatitis b virus (dhbv (duck hepatitis b virus))",
"dhbv (duck hepatitis b virus) (duck hepatitis b virus)",
"hepatitis b-type viruses (hepadnaviridae)"
] | Given the context 'Several lines of evidence have suggested that some naturally occurring mutations of hepatitis B virus (HBV) play a critical role in hepatocellular carcinoma (HCC).', answer the user's query. |
What is the biomedical concept corresponding to 'poliovirus'? | [
"poliovirus (enterovirus c)"
] | [
"unidentified poliovirus",
"polio virus 1 (poliovirus 1)",
"poliovirus type 1 (poliovirus 1)",
"human poliovirus 1 (poliovirus 1)"
] | Given the context 'Poliovirus-mediated disruption of cytoplasmic processing bodies.
', answer the user's query. |
What is the biomedical concept corresponding to 'poliovirus'? | [
"poliovirus (enterovirus c)"
] | [
"unidentified poliovirus",
"polio virus 1 (poliovirus 1)",
"poliovirus type 1 (poliovirus 1)",
"human poliovirus 1 (poliovirus 1)"
] | Given the context 'Poliovirus (PV) is a plus-strand RNA virus containing a genome that is a functional mRNA; thus, we investigated if PV antagonizes the processes that lead to formation of these structures.', answer the user's query. |
What is the biomedical concept corresponding to 'poliovirus'? | [
"poliovirus (enterovirus c)"
] | [
"unidentified poliovirus",
"polio virus 1 (poliovirus 1)",
"poliovirus type 1 (poliovirus 1)",
"human poliovirus 1 (poliovirus 1)"
] | Given the context 'Several other key factors proposed to be essential for P body formation, GW182, Edc3, and Edc4, were unaffected by poliovirus infection.', answer the user's query. |
What is the biomedical concept corresponding to 'mice'? | [
"mouse (mus musculus)",
"house mouse (mus musculus)",
"mus musculus (house mouse)"
] | [
"mouse (mus <genus>)",
"mus musculus musculus (eastern european house mouse)",
"mice (mus <genus>) (mus <genus>)",
"western european house mouse (mus musculus domesticus)"
] | Given the context 'The magnitude of local immunity in the lungs of mice induced by live attenuated influenza vaccines is determined by local viral replication and induction of cytokines.
', answer the user's query. |
What is the biomedical concept corresponding to 'human'? | [
"human (homo sapiens)",
"homo sapiens (human)"
] | [
"humans (homo)",
"homo (humans)",
"macrobiotus sapiens",
"glossus humanus (cardium humanum)"
] | Given the context 'While live attenuated influenza vaccines (LAIVs) have been shown to be efficacious and have been licensed for human use, the surface glycoproteins hemagglutinin (HA) and neuraminidase (NA) have to be updated for optimal protective efficacy.', answer the user's query. |
What is the biomedical concept corresponding to 'mice'? | [
"mouse (mus musculus)",
"house mouse (mus musculus)",
"mus musculus (house mouse)"
] | [
"mouse (mus <genus>)",
"mus musculus musculus (eastern european house mouse)",
"mice (mus <genus>) (mus <genus>)",
"western european house mouse (mus musculus domesticus)"
] | Given the context 'A panel of LAIVs that share the internal protein genes, with unique HA and NA gene segments from different influenza subtypes, was rescued by reverse genetics, and a comparative study of immune responses induced by these vaccines was conducted in mice.', answer the user's query. |
What is the biomedical concept corresponding to 'h5n1'? | [
"influenza a virus (human influenza a virus)",
"human influenza a virus (influenza a virus)",
"influenza virus type a (influenza a virus)",
"fluav (influenza a virus)"
] | [
"h5n1 (h5n1 subtype) (h5n1 subtype)",
"duck influenza virus",
"avian influenza virus (unidentified influenza virus)",
"h5n1 subtype (avian influenza virus h5n1)"
] | Given the context 'A qualitative analysis of immune responses induced by a single dose of an H5N1 LAIV revealed that the vaccine induced robust systemic and mucosal immunity in mice.', answer the user's query. |
What is the biomedical concept corresponding to 'mice'? | [
"mouse (mus musculus)",
"house mouse (mus musculus)",
"mus musculus (house mouse)"
] | [
"mouse (mus <genus>)",
"mus musculus musculus (eastern european house mouse)",
"mice (mus <genus>) (mus <genus>)",
"western european house mouse (mus musculus domesticus)"
] | Given the context 'A qualitative analysis of immune responses induced by a single dose of an H5N1 LAIV revealed that the vaccine induced robust systemic and mucosal immunity in mice.', answer the user's query. |
What is the biomedical concept corresponding to 'h5n1 viruses'? | [
"influenza a virus (human influenza a virus)",
"human influenza a virus (influenza a virus)",
"influenza virus type a (influenza a virus)",
"fluav (influenza a virus)"
] | [
"duck influenza virus",
"avian influenza virus (unidentified influenza virus)",
"swine influenza virus",
"equine influenza virus"
] | Given the context 'In addition, antibodies and memory lymphocytes established in the lungs following vaccination were required for protection against lethal challenge with homologous and heterologous H5N1 viruses.', answer the user's query. |
What is the biomedical concept corresponding to 'mice'? | [
"mouse (mus musculus)",
"house mouse (mus musculus)",
"mus musculus (house mouse)"
] | [
"mouse (mus <genus>)",
"mus musculus musculus (eastern european house mouse)",
"mice (mus <genus>) (mus <genus>)",
"western european house mouse (mus musculus domesticus)"
] | Given the context 'Here, we infected 3D(pol) transgenic mice with another picornavirus, as well as an alphaherpesvirus and a rhabdovirus.', answer the user's query. |
What is the biomedical concept corresponding to 'mice'? | [
"mouse (mus musculus)",
"house mouse (mus musculus)",
"mus musculus (house mouse)"
] | [
"mouse (mus <genus>)",
"mus musculus musculus (eastern european house mouse)",
"mice (mus <genus>) (mus <genus>)",
"western european house mouse (mus musculus domesticus)"
] | Given the context '3D(pol) transgenic FVB mice had significantly lower viral loads and survived longer after infection with all three types of viruses than nontransgenic FVB mice.', answer the user's query. |
What is the biomedical concept corresponding to 'mice'? | [
"mouse (mus musculus)",
"house mouse (mus musculus)",
"mus musculus (house mouse)"
] | [
"mouse (mus <genus>)",
"mus musculus musculus (eastern european house mouse)",
"mice (mus <genus>) (mus <genus>)",
"western european house mouse (mus musculus domesticus)"
] | Given the context '3D(pol) transgenic FVB mice had significantly lower viral loads and survived longer after infection with all three types of viruses than nontransgenic FVB mice.', answer the user's query. |
What is the biomedical concept corresponding to 'mice'? | [
"mouse (mus musculus)",
"house mouse (mus musculus)",
"mus musculus (house mouse)"
] | [
"mouse (mus <genus>)",
"mus musculus musculus (eastern european house mouse)",
"mice (mus <genus>) (mus <genus>)",
"western european house mouse (mus musculus domesticus)"
] | Given the context 'Viral inhibition among three different types of virus by transgenic 3D(pol) suggests that the mechanism of action is not the direct interference with picornaviral 3D(pol) but instead may be the changing of host cells to an antiviral state before or after viral infection occurs, as basal interferon levels were higher in 3D(pol) transgenic mice before infection.', answer the user's query. |
What is the biomedical concept corresponding to 'human immunodeficiency virus type 1'? | [
"human immunodeficiency virus type 1 (human immunodeficiency virus 1)",
"human immunodeficiency virus hiv-1 (human immunodeficiency virus 1)",
"human immunodeficiency virus type 1, hiv-1 (human immunodeficiency virus 1)",
"hiv-1 (human immunodeficiency virus 1)",
"human immunodeficiency virus 1 (human immun... | [
"human immunodeficiency virus (hiv (human immunodeficiency virus))",
"hiv (human immunodeficiency virus) (human immunodeficiency virus)",
"aids virus (human immunodeficiency virus)",
"human immunodeficiency virus type 1 (new york-5 isolate)"
] | Given the context 'RNA aptamers directed to human immunodeficiency virus type 1 Gag polyprotein bind to the matrix and nucleocapsid domains and inhibit virus production.
', answer the user's query. |
What is the biomedical concept corresponding to 'human immunodeficiency virus type 1'? | [
"human immunodeficiency virus type 1 (human immunodeficiency virus 1)",
"human immunodeficiency virus hiv-1 (human immunodeficiency virus 1)",
"human immunodeficiency virus type 1, hiv-1 (human immunodeficiency virus 1)",
"hiv-1 (human immunodeficiency virus 1)",
"human immunodeficiency virus 1 (human immun... | [
"human immunodeficiency virus (hiv (human immunodeficiency virus))",
"hiv (human immunodeficiency virus) (human immunodeficiency virus)",
"aids virus (human immunodeficiency virus)",
"human immunodeficiency virus type 1 (new york-5 isolate)"
] | Given the context 'Gag orchestrates the assembly and release of human immunodeficiency virus type 1 (HIV-1) particles.', answer the user's query. |
What is the biomedical concept corresponding to 'hiv-1'? | [
"hiv-1 (human immunodeficiency virus 1)",
"human immunodeficiency virus type 1, hiv-1 (human immunodeficiency virus 1)",
"hiv1 (human immunodeficiency virus 1) (human immunodeficiency virus 1)",
"human immunodeficiency virus-1 hiv-1 (human immunodeficiency virus 1)",
"human immunodeficiency virus 1 hiv-1 (h... | [
"human immunodeficiency virus (hiv (human immunodeficiency virus))",
"hiv (human immunodeficiency virus) (human immunodeficiency virus)",
"aids virus (human immunodeficiency virus)",
"human immunodeficiency virus type 1 (kb-1 isolate)"
] | Given the context 'Gag orchestrates the assembly and release of human immunodeficiency virus type 1 (HIV-1) particles.', answer the user's query. |
What is the biomedical concept corresponding to 'hiv-1'? | [
"hiv-1 (human immunodeficiency virus 1)",
"human immunodeficiency virus type 1, hiv-1 (human immunodeficiency virus 1)",
"hiv1 (human immunodeficiency virus 1) (human immunodeficiency virus 1)",
"human immunodeficiency virus-1 hiv-1 (human immunodeficiency virus 1)",
"human immunodeficiency virus 1 hiv-1 (h... | [
"human immunodeficiency virus (hiv (human immunodeficiency virus))",
"hiv (human immunodeficiency virus) (human immunodeficiency virus)",
"aids virus (human immunodeficiency virus)",
"human immunodeficiency virus type 1 (kb-1 isolate)"
] | Given the context 'We explored here the potential of anti-Gag RNA aptamers to inhibit HIV-1 replication.', answer the user's query. |
What is the biomedical concept corresponding to 'hiv-1'? | [
"hiv-1 (human immunodeficiency virus 1)",
"human immunodeficiency virus type 1, hiv-1 (human immunodeficiency virus 1)",
"hiv1 (human immunodeficiency virus 1) (human immunodeficiency virus 1)",
"human immunodeficiency virus-1 hiv-1 (human immunodeficiency virus 1)",
"human immunodeficiency virus 1 hiv-1 (h... | [
"human immunodeficiency virus (hiv (human immunodeficiency virus))",
"hiv (human immunodeficiency virus) (human immunodeficiency virus)",
"aids virus (human immunodeficiency virus)",
"human immunodeficiency virus type 1 (kb-1 isolate)"
] | Given the context 'In vitro, RNA aptamers raised against an HIV-1 Gag protein, lacking the N-terminal myristate and the C-terminal p6 (DP6-Gag), could bind to matrix protein (MA), nucleocapsid protein (NC), or entire DP6-Gag protein.', answer the user's query. |
What is the biomedical concept corresponding to 'hiv-1'? | [
"hiv-1 (human immunodeficiency virus 1)",
"human immunodeficiency virus type 1, hiv-1 (human immunodeficiency virus 1)",
"hiv1 (human immunodeficiency virus 1) (human immunodeficiency virus 1)",
"human immunodeficiency virus-1 hiv-1 (human immunodeficiency virus 1)",
"human immunodeficiency virus 1 hiv-1 (h... | [
"human immunodeficiency virus (hiv (human immunodeficiency virus))",
"hiv (human immunodeficiency virus) (human immunodeficiency virus)",
"aids virus (human immunodeficiency virus)",
"human immunodeficiency virus type 1 (kb-1 isolate)"
] | Given the context 'Binding studies revealed that the "NC-binders" specifically compete with the packaging signal (psi) of HIV-1 for binding to DP6-Gag.', answer the user's query. |
What is the biomedical concept corresponding to 'hiv-1'? | [
"hiv-1 (human immunodeficiency virus 1)",
"human immunodeficiency virus type 1, hiv-1 (human immunodeficiency virus 1)",
"hiv1 (human immunodeficiency virus 1) (human immunodeficiency virus 1)",
"human immunodeficiency virus-1 hiv-1 (human immunodeficiency virus 1)",
"human immunodeficiency virus 1 hiv-1 (h... | [
"human immunodeficiency virus (hiv (human immunodeficiency virus))",
"hiv (human immunodeficiency virus) (human immunodeficiency virus)",
"aids virus (human immunodeficiency virus)",
"human immunodeficiency virus type 1 (kb-1 isolate)"
] | Given the context 'Our results reveal an essential interaction between HIV-1 Gag and the psi-region that may be distinct from that which occurs during the encapsidation of genomic RNA.', answer the user's query. |
What is the biomedical concept corresponding to 'simian immunodeficiency virus'? | [
"simian immunodeficiency virus, siv (simian immunodeficiency virus)",
"simian immunodeficiency virus siv (simian immunodeficiency virus)",
"siv (simian immunodeficiency virus) (simian immunodeficiency virus)",
"simian immunodeficiency viruses siv (simian immunodeficiency virus)",
"civ (simian immunodeficien... | [
"simian-human immunodeficiency virus (shiv (simian-human immunodeficiency virus))",
"simian immunodeficiency virus sivsm (simian immunodeficiency virus - sm)",
"simian-chimpanzee immunodeficiency virus",
"shiv (simian-human immunodeficiency virus) (simian-human immunodeficiency virus)"
] | Given the context 'Macaque long-term nonprogressors resist superinfection with multiple CD8+ T cell escape variants of simian immunodeficiency virus.
Human immunodeficiency virus (HIV)-positive individuals can be superinfected with different virus strains.', answer the user's query. |
What is the biomedical concept corresponding to 'human immunodeficiency virus'? | [
"human immunodeficiency virus (hiv (human immunodeficiency virus))",
"hiv (human immunodeficiency virus) (human immunodeficiency virus)",
"aids virus (human immunodeficiency virus)"
] | [
"aids virus (human immunodeficiency virus 1)",
"human immunodeficiency virus hiv-1 (human immunodeficiency virus 1)",
"hiv (human immunodeficiency virus 1) (human immunodeficiency virus 1)",
"aids virus (human immunodeficiency virus 2)"
] | Given the context 'Macaque long-term nonprogressors resist superinfection with multiple CD8+ T cell escape variants of simian immunodeficiency virus.
Human immunodeficiency virus (HIV)-positive individuals can be superinfected with different virus strains.', answer the user's query. |
What is the biomedical concept corresponding to 'hiv'? | [
"human immunodeficiency virus (hiv (human immunodeficiency virus))",
"hiv (human immunodeficiency virus) (human immunodeficiency virus)",
"aids virus (human immunodeficiency virus)"
] | [
"aids virus (human immunodeficiency virus 1)",
"hiv (human immunodeficiency virus 1) (human immunodeficiency virus 1)",
"hiv-1 (human immunodeficiency virus 1)",
"human immunodeficiency virus hiv-1 (human immunodeficiency virus 1)"
] | Given the context 'Macaque long-term nonprogressors resist superinfection with multiple CD8+ T cell escape variants of simian immunodeficiency virus.
Human immunodeficiency virus (HIV)-positive individuals can be superinfected with different virus strains.', answer the user's query. |
What is the biomedical concept corresponding to 'hiv'? | [
"human immunodeficiency virus (hiv (human immunodeficiency virus))",
"hiv (human immunodeficiency virus) (human immunodeficiency virus)",
"aids virus (human immunodeficiency virus)"
] | [
"aids virus (human immunodeficiency virus 1)",
"hiv (human immunodeficiency virus 1) (human immunodeficiency virus 1)",
"hiv-1 (human immunodeficiency virus 1)",
"human immunodeficiency virus hiv-1 (human immunodeficiency virus 1)"
] | Given the context 'Individuals who control an initial HIV infection are therefore still at risk for subsequent infection with divergent viruses, but the barriers to such superinfection remain unclear.', answer the user's query. |
What is the biomedical concept corresponding to 'indian rhesus macaques'? | [
"rhesus macaques (macaca mulatta)",
"rhesus macaque (macaca mulatta)",
"rhesus monkey (macaca mulatta)",
"rhesus monkeys (macaca mulatta)",
"macaca mulatta (cercopithecus mulatta)"
] | [
"macaca irus (macaca fascicularis)",
"arunachal macaque (macaca munzala)",
"red-tailed monkey (cercopithecus ascanius)",
"crab-eating macaque (macaca fascicularis)"
] | Given the context 'Here we tested long-term nonprogressors' (LTNPs') susceptibility to superinfection using Indian rhesus macaques that express the major histocompatibility complex class I (MHC-I) allele', answer the user's query. |
What is the biomedical concept corresponding to 'virus sivmac239'? | [
"simian immunodeficiency virus, siv (simian immunodeficiency virus)",
"siv (simian immunodeficiency virus) (simian immunodeficiency virus)",
"simian immunodeficiency virus siv (simian immunodeficiency virus)",
"civ (simian immunodeficiency virus) (simian immunodeficiency virus)",
"simian immunodeficiency vi... | [
"simian immunodeficiency virus sivsm (simian immunodeficiency virus - sm)",
"siv-sm (simian immunodeficiency virus - sm)",
"siv/hiv (simian-human immunodeficiency virus)",
"simian immunodeficiency virus sivmon (simian immunodeficiency virus - mon)"
] | Given the context 'Mamu-B 17, which is associated with control of the pathogenic AIDS virus SIVmac239.', answer the user's query. |
What is the biomedical concept corresponding to 'simian immunodeficiency virus'? | [
"simian immunodeficiency virus, siv (simian immunodeficiency virus)",
"simian immunodeficiency virus siv (simian immunodeficiency virus)",
"siv (simian immunodeficiency virus) (simian immunodeficiency virus)",
"simian immunodeficiency viruses siv (simian immunodeficiency virus)",
"civ (simian immunodeficien... | [
"simian-human immunodeficiency virus (shiv (simian-human immunodeficiency virus))",
"simian immunodeficiency virus sivsm (simian immunodeficiency virus - sm)",
"simian-chimpanzee immunodeficiency virus",
"shiv (simian-human immunodeficiency virus) (simian-human immunodeficiency virus)"
] | Given the context 'Both LTNPs maintained robust immune responses, including simian immunodeficiency virus (SIV)-specific CD8(+) and CD4(+) T cells and neutralizing antibodies.', answer the user's query. |
What is the biomedical concept corresponding to 'siv'? | [
"siv (simian immunodeficiency virus) (simian immunodeficiency virus)",
"simian immunodeficiency virus, siv (simian immunodeficiency virus)",
"simian immunodeficiency virus siv (simian immunodeficiency virus)",
"civ (simian immunodeficiency virus) (simian immunodeficiency virus)",
"simian immunodeficiency vi... | [
"siv-sm (simian immunodeficiency virus - sm)",
"siv/hiv (simian-human immunodeficiency virus)",
"sano virus",
"swinepox virus"
] | Given the context 'Both LTNPs maintained robust immune responses, including simian immunodeficiency virus (SIV)-specific CD8(+) and CD4(+) T cells and neutralizing antibodies.', answer the user's query. |
What is the biomedical concept corresponding to 'quercus robur'? | [
"quercus robur (pedunculate oak)",
"english oak (quercus robur)",
"truffle oak (quercus robur)",
"pedunculate oak (quercus robur)"
] | [
"quercus grisea",
"quercus borealis (quercus rubra)",
"quercus rubra (northern red oak)",
"quercus nivea"
] | Given the context 'First, we construct a quantitative food web for three dominant leaf miner species on the oak Quercus robur.', answer the user's query. |
What is the biomedical concept corresponding to 'tischeria ekebladella'? | [
"tischeria ekebladella (phalaena ekebladella)",
"phalaena ekebladella (tischeria ekebladella)"
] | [
"batia lambdella (phalaena lambdella)",
"eulechria pallidella",
"phalaena lambdella (batia lambdella)",
"campanula ekimiana"
] | Given the context 'While only a small fraction of the parasitoid pool is shared among Tischeria ekebladella and each of two Phyllonorycter species, the parasitoid communities of the congeneric Phyllonorycter species overlap substantially.', answer the user's query. |
What is the biomedical concept corresponding to 't. ekebladella'? | [
"tischeria ekebladella (phalaena ekebladella)",
"phalaena ekebladella (tischeria ekebladella)"
] | [
"entobdella",
"tyrannobdella",
"eulechria pallidella",
"helobdella okhotica"
] | Given the context '4. Based on the structure of the food web, we predict strong short- and long-term indirect interactions between the Phyllonorycter species, and limited interactions between them and T. ekebladella.', answer the user's query. |
What is the biomedical concept corresponding to 't. ekebladella'? | [
"tischeria ekebladella (phalaena ekebladella)",
"phalaena ekebladella (tischeria ekebladella)"
] | [
"entobdella",
"tyrannobdella",
"eulechria pallidella",
"helobdella okhotica"
] | Given the context 'As T. ekebladella is the main source of its own parasitoids, we expect to find intraspecific density-dependent parasitism in this species.', answer the user's query. |
What is the biomedical concept corresponding to 't. ekebladella'? | [
"tischeria ekebladella (phalaena ekebladella)",
"phalaena ekebladella (tischeria ekebladella)"
] | [
"entobdella",
"tyrannobdella",
"eulechria pallidella",
"helobdella okhotica"
] | Given the context '5. Consistent with these predictions, parasitism in T. ekebladella was high on trees with high densities of conspecifics in the previous generation.', answer the user's query. |
What is the biomedical concept corresponding to 'schizosaccharomyces pombe'? | [
"fission yeast (schizosaccharomyces pombe)",
"schizosaccharomyces pombe (schizosaccharomyces malidevorans)"
] | [
"schizosaccharomyces",
"schizosaccharomyces osmophilus",
"schizosaccharomyces pombe oy26",
"schizosaccharomyces octosporus"
] | Given the context 'Determinants that specify the integration pattern of retrotransposon Tf1 in the fbp1 promoter of Schizosaccharomyces pombe.
', answer the user's query. |
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