query stringlengths 53 100 | positive listlengths 1 5 | negative listlengths 1 4 | system stringlengths 68 790 |
|---|---|---|---|
What is the biomedical concept corresponding to 'blastocrithidia culicis'? | [
"blastocrithidia culicis (strigomonas culicis)",
"strigomonas culicis (blastocrithidia culicis)",
"herpetomonas culicis (strigomonas culicis)"
] | [
"inocybe culicis",
"entomophthora culicis (empusa culicis)",
"allospironema culicis (entomospira culicis)",
"vavraia culicis"
] | Given the context 'The genus Strigomonas included former Crithidia oncopelti and Blastocrithidia culicis plus a new species.', answer the user's query. |
What is the biomedical concept corresponding to 'human adenoviruses'? | [
"human adenovirus c (human mastadenovirus c)"
] | [
"adenovirus (unidentified adenovirus)",
"unidentified adenovirus (adenovirus)",
"human adenovirus (human adenovirus sp.)",
"unidentified human adenovirus"
] | Given the context 'Detection and quantitation of infectious human adenoviruses and JC polyomaviruses in water by immunofluorescence assay.
', answer the user's query. |
What is the biomedical concept corresponding to 'jc polyomaviruses'? | [
"jc-polyomavirus (jc polyomavirus)",
"jc virus (jc polyomavirus)",
"polyomavirus jc (jc polyomavirus)",
"jc polyomavirus jcv (jc polyomavirus)",
"jc polyomavirus (human polyomavirus (type jc))"
] | [
"jc polyomavirus type 2",
"jc polyomavirus type 3",
"jc polyomavirus type 4",
"jc polyomavirus type 7"
] | Given the context 'Detection and quantitation of infectious human adenoviruses and JC polyomaviruses in water by immunofluorescence assay.
', answer the user's query. |
What is the biomedical concept corresponding to 'human adenoviruses'? | [
"human adenovirus c (human mastadenovirus c)"
] | [
"adenovirus (unidentified adenovirus)",
"unidentified adenovirus (adenovirus)",
"human adenovirus (human adenovirus sp.)",
"unidentified human adenovirus"
] | Given the context 'An indirect immunofluorescence assay has been developed to quantify infectious human adenoviruses types 2 and 41 and JC polyomaviruses strain Mad-4 in water samples.', answer the user's query. |
What is the biomedical concept corresponding to 'jc polyomaviruses'? | [
"jc-polyomavirus (jc polyomavirus)",
"jc virus (jc polyomavirus)",
"polyomavirus jc (jc polyomavirus)",
"jc polyomavirus jcv (jc polyomavirus)",
"jc polyomavirus (human polyomavirus (type jc))"
] | [
"jc polyomavirus type 2",
"jc polyomavirus type 3",
"jc polyomavirus type 4",
"jc polyomavirus type 7"
] | Given the context 'An indirect immunofluorescence assay has been developed to quantify infectious human adenoviruses types 2 and 41 and JC polyomaviruses strain Mad-4 in water samples.', answer the user's query. |
What is the biomedical concept corresponding to 'human'? | [
"human (homo sapiens)",
"homo sapiens (human)"
] | [
"humans (homo)",
"homo (humans)",
"macrobiotus sapiens",
"glossus humanus (cardium humanum)"
] | Given the context 'River water samples spiked previously with human adenoviruses and raw sewage samples were also analyzed using the proposed immunofluorescence assay as well as by qPCR.', answer the user's query. |
What is the biomedical concept corresponding to 'humans'? | [
"human (homo sapiens)",
"homo sapiens (human)"
] | [
"humans (homo)",
"homo (humans)",
"macrobiotus sapiens",
"glossus humanus (cardium humanum)"
] | Given the context 'By detecting the 2A(pro) produced early during the virus infection cycle, the CFP-YFP pair effectively identifies infectious coxsackievirus B3 (CVB3), a picornavirus that causes viral myocarditis in humans.', answer the user's query. |
What is the biomedical concept corresponding to 'seasonal influenza a/h1n1'? | [
"influenza a virus (human influenza a virus)",
"human influenza a virus (influenza a virus)",
"fluav (influenza a virus)",
"influenza virus type a (influenza a virus)"
] | [
"influenza a virus (h1n1) (unidentified influenza a virus (h1n1))",
"influenza a virus (a/california/07/2010(h1n1))",
"influenza a virus (a/california/07/2008(h1n1))",
"influenza a virus (a/ws/1933(h1n1))"
] | Given the context 'One-step real-time reverse transcription-PCR assays for detecting and subtyping pandemic influenza A/H1N1 2009, seasonal influenza A/H1N1, and seasonal influenza A/H3N2 viruses.
Pandemic influenza A/H1N1 2009 (A/H1N1pdm) virus has caused significant outbreaks worldwide.', answer the user's query. |
What is the biomedical concept corresponding to 'seasonal influenza a/h3n2 viruses'? | [
"fluav (influenza a virus)",
"influenza a virus (human influenza a virus)",
"human influenza a virus (influenza a virus)",
"influenza virus type a (influenza a virus)"
] | [
"influenzavirus a (alphainfluenzavirus)",
"influenza a virus h3n2 (influenza virus a/h3n2)",
"influenza a virus (a/china)",
"influenza virus a/h3n2 (influenza a virus h3n2)"
] | Given the context 'One-step real-time reverse transcription-PCR assays for detecting and subtyping pandemic influenza A/H1N1 2009, seasonal influenza A/H1N1, and seasonal influenza A/H3N2 viruses.
Pandemic influenza A/H1N1 2009 (A/H1N1pdm) virus has caused significant outbreaks worldwide.', answer the user's query. |
What is the biomedical concept corresponding to 'a/h1n1pdm virus'? | [
"influenza a virus (human influenza a virus)",
"human influenza a virus (influenza a virus)",
"fluav (influenza a virus)",
"influenza virus type a (influenza a virus)"
] | [
"influenza a virus (a/china)",
"h1n1 swine influenza virus",
"influenzavirus a (alphainfluenzavirus)",
"influenza a virus (a/nws-mvi(h1n2))"
] | Given the context 'A previous one-step real-time reverse transcription-PCR (rRT-PCR) assay for detecting A/H1N1pdm virus (H1pdm rRT-PCR assay) was improved since the former probe had a low melting temperature and low tolerance to viral mutation.', answer the user's query. |
What is the biomedical concept corresponding to 'a/h1n1pdm virus'? | [
"influenza a virus (human influenza a virus)",
"human influenza a virus (influenza a virus)",
"fluav (influenza a virus)",
"influenza virus type a (influenza a virus)"
] | [
"influenza a virus (a/china)",
"h1n1 swine influenza virus",
"influenzavirus a (alphainfluenzavirus)",
"influenza a virus (a/nws-mvi(h1n2))"
] | Given the context 'To help with the screening of the A/H1N1pdm virus, rRT-PCR assays were also developed for detecting human seasonal A/H1N1 (H1 rRT-PCR assay) and A/H3N2 influenza viruses (H3 rRT-PCR assay).', answer the user's query. |
What is the biomedical concept corresponding to 'human'? | [
"human (homo sapiens)",
"homo sapiens (human)"
] | [
"humans (homo)",
"homo (humans)",
"macrobiotus sapiens",
"glossus humanus (cardium humanum)"
] | Given the context 'To help with the screening of the A/H1N1pdm virus, rRT-PCR assays were also developed for detecting human seasonal A/H1N1 (H1 rRT-PCR assay) and A/H3N2 influenza viruses (H3 rRT-PCR assay).', answer the user's query. |
What is the biomedical concept corresponding to 'seasonal a/h1n1'? | [
"fluav (influenza a virus)",
"human influenza a virus (influenza a virus)",
"influenza a virus (human influenza a virus)",
"influenza virus type a (influenza a virus)"
] | [
"influenza a virus (a/china)",
"influenza a virus (a/ws/1933(h1n1))",
"influenza a virus (a/california/07/2010(h1n1))",
"influenza a virus (a/california/07/2008(h1n1))"
] | Given the context 'To help with the screening of the A/H1N1pdm virus, rRT-PCR assays were also developed for detecting human seasonal A/H1N1 (H1 rRT-PCR assay) and A/H3N2 influenza viruses (H3 rRT-PCR assay).', answer the user's query. |
What is the biomedical concept corresponding to 'a/h3n2 influenza viruses'? | [
"influenza a virus (human influenza a virus)",
"fluav (influenza a virus)",
"influenza virus type a (influenza a virus)",
"human influenza a virus (influenza a virus)"
] | [
"influenzavirus a (alphainfluenzavirus)",
"influenza a virus (a/china)",
"alphainfluenzavirus (influenzavirus a)",
"influenza c viruses (influenza c virus)"
] | Given the context 'To help with the screening of the A/H1N1pdm virus, rRT-PCR assays were also developed for detecting human seasonal A/H1N1 (H1 rRT-PCR assay) and A/H3N2 influenza viruses (H3 rRT-PCR assay).', answer the user's query. |
What is the biomedical concept corresponding to 'viral strains of a/h1n1pdm'? | [
"fluav (influenza a virus)",
"influenza a virus (human influenza a virus)",
"human influenza a virus (influenza a virus)",
"influenza virus type a (influenza a virus)"
] | [
"influenzavirus a (alphainfluenzavirus)",
"alphainfluenzavirus (influenzavirus a)",
"h1n1 swine influenza virus",
"influenza a virus (a/china)"
] | Given the context 'In addition, the improved H1pdm rRT-PCR assay could detect two viral strains of A/H1N1pdm, namely, A/Aichi/472/2009 (H1N1)pdm and A/Sakai/89/2009 (H1N1)pdm, which have mutation(s) in the probe-binding region of the hemagglutinin gene, without loss of sensitivity.', answer the user's query. |
What is the biomedical concept corresponding to 'influenza a viruses'? | [
"influenza a virus (human influenza a virus)",
"fluav (influenza a virus)",
"human influenza a virus (influenza a virus)",
"influenza virus type a (influenza a virus)"
] | [
"influenzavirus a (alphainfluenzavirus)",
"alphainfluenzavirus (influenzavirus a)",
"influenza b virus (influenza virus type b)",
"influenza virus type b (influenza b virus)"
] | Given the context 'Of these, 26, 20, and 2 samples were identified as positive for A/H1pdm, A/H3, and A/H1, respectively, while 42 samples were negative for influenza A viruses.', answer the user's query. |
What is the biomedical concept corresponding to 'influenza viruses'? | [
"influenza virus (unidentified influenza virus)",
"influenzavirus (unidentified influenza virus)",
"unidentified influenza virus (avian influenza virus)",
"avian influenza virus (unidentified influenza virus)"
] | [
"influenza a virus (human influenza a virus)",
"fluav (influenza a virus)",
"influenza virus type a (influenza a virus)",
"human influenza a virus (influenza a virus)"
] | Given the context 'The present results suggest that these highly sensitive and specific H1pdm, H1, and H3 rRT-PCR assays are useful not only for diagnosing influenza viruses, but also for the surveillance of influenza viruses.
', answer the user's query. |
What is the biomedical concept corresponding to 'influenza viruses'? | [
"influenza virus (unidentified influenza virus)",
"influenzavirus (unidentified influenza virus)",
"unidentified influenza virus (avian influenza virus)",
"avian influenza virus (unidentified influenza virus)"
] | [
"influenza a virus (human influenza a virus)",
"fluav (influenza a virus)",
"influenza virus type a (influenza a virus)",
"human influenza a virus (influenza a virus)"
] | Given the context 'The present results suggest that these highly sensitive and specific H1pdm, H1, and H3 rRT-PCR assays are useful not only for diagnosing influenza viruses, but also for the surveillance of influenza viruses.
', answer the user's query. |
What is the biomedical concept corresponding to 'saccharomyces cerevisiae'? | [
"saccharomyces cerevisiae (saccharomyces cerevisiae (desm.) meyen ex e.c. hansen, 1883)",
"saccharomyces cerevisiae (desm.) meyen ex e.c. hansen, 1883 (saccharomyces cerevisiae)",
"baker's yeast (saccharomyces cerevisiae)",
"mycoderma cerevisiae (saccharomyces cerevisiae)",
"saccharomyces italicus (saccharo... | [
"saccharomyces globosus (saccharomyces uvarum)",
"saccharomyces lactis (kluyveromyces lactis)",
"saccharomyces albicans (candida albicans)",
"saccharomyces hansenii (debaryomyces hansenii)"
] | Given the context 'The transcriptional response of Saccharomyces cerevisiae to proapoptotic concentrations of Pichia membranifaciens killer toxin.
', answer the user's query. |
What is the biomedical concept corresponding to 'pichia membranifaciens'? | [
"pichia membranifaciens (saccharomyces membranifaciens)",
"pichia membranaefaciens (pichia membranifaciens)",
"saccharomyces membranifaciens (pichia membranifaciens)",
"candida valida (pichia membranifaciens)"
] | [
"candida membranifaciens ([candida] membranifaciens)",
"pichia membranifaciens nrrl y-2026",
"pichia manshurica (pichia galeiformis)",
"pichia membranifaciens x pichia sp."
] | Given the context 'The transcriptional response of Saccharomyces cerevisiae to proapoptotic concentrations of Pichia membranifaciens killer toxin.
', answer the user's query. |
What is the biomedical concept corresponding to 'pichia membranifaciens'? | [
"pichia membranifaciens (saccharomyces membranifaciens)",
"pichia membranaefaciens (pichia membranifaciens)",
"saccharomyces membranifaciens (pichia membranifaciens)",
"candida valida (pichia membranifaciens)"
] | [
"candida membranifaciens ([candida] membranifaciens)",
"pichia membranifaciens nrrl y-2026",
"pichia manshurica (pichia galeiformis)",
"pichia membranifaciens x pichia sp."
] | Given the context 'PMKT (Pichia membranifaciens killer toxin) reportedly has antimicrobial activity against yeasts and filamentous fungi.', answer the user's query. |
What is the biomedical concept corresponding to 'yeasts'? | [
"saccharomyces cerevisiae (saccharomyces cerevisiae (desm.) meyen ex e.c. hansen, 1883)",
"saccharomyces cerevisiae (desm.) meyen ex e.c. hansen, 1883 (saccharomyces cerevisiae)",
"mycoderma cerevisiae (saccharomyces cerevisiae)",
"baker's yeast (saccharomyces cerevisiae)",
"saccharomyces italicus (saccharo... | [
"true yeasts (saccharomycotina)",
"saccharomyces albicans (candida albicans)",
"saccharomyces lactis (kluyveromyces lactis)",
"cryptomyces"
] | Given the context 'PMKT (Pichia membranifaciens killer toxin) reportedly has antimicrobial activity against yeasts and filamentous fungi.', answer the user's query. |
What is the biomedical concept corresponding to 'saccharomyces cerevisiae'? | [
"saccharomyces cerevisiae (saccharomyces cerevisiae (desm.) meyen ex e.c. hansen, 1883)",
"saccharomyces cerevisiae (desm.) meyen ex e.c. hansen, 1883 (saccharomyces cerevisiae)",
"baker's yeast (saccharomyces cerevisiae)",
"mycoderma cerevisiae (saccharomyces cerevisiae)",
"saccharomyces italicus (saccharo... | [
"saccharomyces globosus (saccharomyces uvarum)",
"saccharomyces lactis (kluyveromyces lactis)",
"saccharomyces albicans (candida albicans)",
"saccharomyces hansenii (debaryomyces hansenii)"
] | Given the context 'By contrast, the evidence presented here shows that low PMKT doses lead to a cell death process in Saccharomyces cerevisiae accompanied by cytological and biochemical indicators of apoptotic programmed cell death, namely, the production of reactive oxygen species, DNA strand breaks, metacaspase activation and cytochrome c release.', answer the user's query. |
What is the biomedical concept corresponding to 's. cerevisiae'? | [
"saccharomyces cerevisiae (saccharomyces cerevisiae (desm.) meyen ex e.c. hansen, 1883)",
"saccharomyces cerevisiae (desm.) meyen ex e.c. hansen, 1883 (saccharomyces cerevisiae)",
"baker's yeast (saccharomyces cerevisiae)",
"mycoderma cerevisiae (saccharomyces cerevisiae)",
"saccharomyces italicus (saccharo... | [
"saccharomyces lactis (kluyveromyces lactis)",
"saccharomyces globosus (saccharomyces uvarum)",
"saccharomyces albicans (candida albicans)",
"saccharomyces hansenii (debaryomyces hansenii)"
] | Given the context 'We have explored the global gene expression response of S. cerevisiae during that stimulus.', answer the user's query. |
What is the biomedical concept corresponding to 'infectious myonecrosis virus'? | [
"penaeid shrimp infectious myonecrosis virus"
] | [
"mediterranean bat virus",
"mundri virus",
"fomede virus",
"mev (mink enteritis virus) (mink enteritis virus)"
] | Given the context 'Detection of infectious myonecrosis virus using monoclonal antibody specific to N and C fragments of the capsid protein expressed heterologously.
', answer the user's query. |
What is the biomedical concept corresponding to 'infectious myonecrosis virus'? | [
"penaeid shrimp infectious myonecrosis virus"
] | [
"mediterranean bat virus",
"mundri virus",
"fomede virus",
"mev (mink enteritis virus) (mink enteritis virus)"
] | Given the context 'The gene encoding the capsid protein in ORF1 of the genome of infectious myonecrosis virus (IMNV) (GenBank AY570982) was amplified into three parts named CP-N (nucleotides 2248-3045), CP-I (nucleotides 3046-3954) and CP-C (nucleotides 3955-4953).', answer the user's query. |
What is the biomedical concept corresponding to 'bl21 e. coli'? | [
"bacillus coli (escherichia coli)",
"e. coli (escherichia coli)",
"enterococcus coli (escherichia coli)",
"bacterium coli (escherichia coli)"
] | [
"escherichia coli bl21 (escherichia coli strain bl21)",
"escherichia coli strain bl21 (escherichia coli bl21)",
"escherichia coli kte71",
"escherichia coli ec4421"
] | Given the context 'The CP-N fragment was inserted into expression vector pTYB1 while CP-I and CP-C were each inserted into expression vector pGEX-6P-1 for transformation of BL21 E. coli strain.', answer the user's query. |
What is the biomedical concept corresponding to 'white spot syndrome virus'? | [
"whitespot syndrome virus (white spot syndrome virus)",
"white spot syndrome virus (white spot syndrome virus 1)",
"white spot syndrome virus 1 (white spot syndrome virus)"
] | [
"white spot syndrome virus of shrimp (shrimp white spot syndrome virus)",
"white spot bacilliform virus (shrimp white spot syndrome virus)",
"shrimp white spot syndrome virus (white spot syndrome virus of penaeid shrimp)",
"wssv (shrimp white spot syndrome virus) (shrimp white spot syndrome virus)"
] | Given the context 'There was no cross-reaction with shrimp tissues or common shrimp viruses including white spot syndrome virus (WSSV), yellow head virus (YHV), Taura syndrome virus (TSV), Penaeus monodon nucleopolyhedrovirus (PemoNPV), Penaeus stylirostris densovirus (PstDNV) and Penaeus monodon densovirus (PmDNV).', answer the user's query. |
What is the biomedical concept corresponding to 'wssv'? | [
"whitespot syndrome virus (white spot syndrome virus)"
] | [
"wssv (shrimp white spot syndrome virus) (shrimp white spot syndrome virus)",
"shrimp white spot syndrome virus (white spot syndrome virus of penaeid shrimp)",
"white spot syndrome virus of shrimp (shrimp white spot syndrome virus)",
"white spot syndrome virus of penaeid shrimp (shrimp white spot syndrome vir... | Given the context 'There was no cross-reaction with shrimp tissues or common shrimp viruses including white spot syndrome virus (WSSV), yellow head virus (YHV), Taura syndrome virus (TSV), Penaeus monodon nucleopolyhedrovirus (PemoNPV), Penaeus stylirostris densovirus (PstDNV) and Penaeus monodon densovirus (PmDNV).', answer the user's query. |
What is the biomedical concept corresponding to 'taura syndrome virus'? | [
"taura syndrome virus (taura syndrome virus of marine penaeid shrimp)",
"taura syndrome virus of marine penaeid shrimp (taura syndrome virus)"
] | [
"tartou virus",
"tt virus (torque teno virus)",
"tunisian sheep virus",
"turkish sheep encephalitis virus (tsev (turkish sheep encephalitis virus))"
] | Given the context 'There was no cross-reaction with shrimp tissues or common shrimp viruses including white spot syndrome virus (WSSV), yellow head virus (YHV), Taura syndrome virus (TSV), Penaeus monodon nucleopolyhedrovirus (PemoNPV), Penaeus stylirostris densovirus (PstDNV) and Penaeus monodon densovirus (PmDNV).', answer the user's query. |
What is the biomedical concept corresponding to 'penaeus monodon nucleopolyhedrovirus'? | [
"penaeus monodon nucleopolyhedrovirus (monodon baculo virus)",
"monodon baculo virus (penaeus monodon nucleopolyhedrovirus)",
"monodon baculovirus (penaeus monodon nucleopolyhedrovirus)"
] | [
"penaeus vannamei nucleopolyhedrovirus",
"penaeus monodon densovirus",
"penunpv (perina nuda nucleopolyhedrovirus)",
"penaeus monodon endogenous nimavirus"
] | Given the context 'There was no cross-reaction with shrimp tissues or common shrimp viruses including white spot syndrome virus (WSSV), yellow head virus (YHV), Taura syndrome virus (TSV), Penaeus monodon nucleopolyhedrovirus (PemoNPV), Penaeus stylirostris densovirus (PstDNV) and Penaeus monodon densovirus (PmDNV).', answer the user's query. |
What is the biomedical concept corresponding to 'sheep poxvirus'? | [
"sheep pox virus (sheeppox virus)",
"sheeppox virus (sppv (sheeppox virus))",
"sppv (sheeppox virus) (sheeppox virus)"
] | [
"sheeppox virus a",
"small pox virus (variola virus)",
"fowl poxvirus (fowlpox virus)",
"goatpox virus"
] | Given the context 'The genus Capripoxvirus (CaPV) comprises three members namely, sheep poxvirus (SPPV), goat poxvirus (GTPV) and lumpy skin disease virus (LSDV) affecting sheep, goats and cattle, respectively.', answer the user's query. |
What is the biomedical concept corresponding to 'sppv'? | [
"sppv (sheeppox virus) (sheeppox virus)",
"sheeppox virus (sppv (sheeppox virus))"
] | [
"salmon pancreas disease virus (spdv (salmon pancreas disease virus))",
"spdv (salmon pancreas disease virus) (salmon pancreas disease virus)",
"skunkpox virus",
"porcine sapovirus"
] | Given the context 'The genus Capripoxvirus (CaPV) comprises three members namely, sheep poxvirus (SPPV), goat poxvirus (GTPV) and lumpy skin disease virus (LSDV) affecting sheep, goats and cattle, respectively.', answer the user's query. |
What is the biomedical concept corresponding to 'goat poxvirus'? | [
"goatpox virus"
] | [
"sheep pox virus (sheeppox virus)",
"goatpox virus sudan",
"goatpox virus ghana",
"goatpox virus pellor"
] | Given the context 'The genus Capripoxvirus (CaPV) comprises three members namely, sheep poxvirus (SPPV), goat poxvirus (GTPV) and lumpy skin disease virus (LSDV) affecting sheep, goats and cattle, respectively.', answer the user's query. |
What is the biomedical concept corresponding to 'lumpy skin disease virus'? | [
"lumpy skin disease virus (lsdv (lumpy skin disease virus))",
"lsdv (lumpy skin disease virus) (lumpy skin disease virus)"
] | [
"lumpy skin disease virus nw-lw",
"lumpy skin disease virus nigeria 1996 (lumpy skin disease virus nigeria 96)",
"lumpy skin disease virus ni-2490",
"lumpy skin disease virus vaccine nigeria"
] | Given the context 'The genus Capripoxvirus (CaPV) comprises three members namely, sheep poxvirus (SPPV), goat poxvirus (GTPV) and lumpy skin disease virus (LSDV) affecting sheep, goats and cattle, respectively.', answer the user's query. |
What is the biomedical concept corresponding to 'lsdv'? | [
"lsdv (lumpy skin disease virus) (lumpy skin disease virus)",
"lumpy skin disease virus (lsdv (lumpy skin disease virus))"
] | [
"swine vesicular disease virus",
"lymphoproliferative disease virus (lymphoproliferative disease virus of turkeys)",
"lpdv (lymphoproliferative disease virus) (lymphoproliferative disease virus)",
"lymphoproliferative disease virus of turkeys (lymphoproliferative disease virus)"
] | Given the context 'The genus Capripoxvirus (CaPV) comprises three members namely, sheep poxvirus (SPPV), goat poxvirus (GTPV) and lumpy skin disease virus (LSDV) affecting sheep, goats and cattle, respectively.', answer the user's query. |
What is the biomedical concept corresponding to 'sheep'? | [
"sheep (ovis aries)",
"domestic sheep (ovis aries)",
"wild sheep (ovis aries)",
"lambs (ovis aries)",
"ovis ovis (ovis aries)"
] | [
"snow sheep (ovis nivicola)",
"ovis canadensis (bighorn sheep)",
"bighorn sheep (ovis canadensis)",
"dall sheep (ovis dalli)"
] | Given the context 'The genus Capripoxvirus (CaPV) comprises three members namely, sheep poxvirus (SPPV), goat poxvirus (GTPV) and lumpy skin disease virus (LSDV) affecting sheep, goats and cattle, respectively.', answer the user's query. |
What is the biomedical concept corresponding to 'goats'? | [
"goats (capra hircus)",
"domestic goat (capra hircus)",
"goat (capra hircus) (capra hircus)",
"capra aegagrus hircus (capra hircus)",
"capra hircus (capra aegagrus hircus)"
] | [
"wild goat (capra aegagrus)",
"capra aegagrus (capra hircus aegagrus)",
"capra hircus aegagrus (capra aegagrus)",
"capra"
] | Given the context 'The genus Capripoxvirus (CaPV) comprises three members namely, sheep poxvirus (SPPV), goat poxvirus (GTPV) and lumpy skin disease virus (LSDV) affecting sheep, goats and cattle, respectively.', answer the user's query. |
What is the biomedical concept corresponding to 'cattle'? | [
"domestic cattle (bos taurus)",
"bovine (bos taurus)",
"domestic cow (bos taurus)",
"bos bovis (bos taurus)",
"cow (bos taurus) (bos taurus)"
] | [
"cattle (bos)",
"bos (cattle)",
"bos taurus indicus (bos indicus)",
"zebu cattle (bos indicus)"
] | Given the context 'The genus Capripoxvirus (CaPV) comprises three members namely, sheep poxvirus (SPPV), goat poxvirus (GTPV) and lumpy skin disease virus (LSDV) affecting sheep, goats and cattle, respectively.', answer the user's query. |
What is the biomedical concept corresponding to 'sheep'? | [
"sheep (ovis aries)",
"domestic sheep (ovis aries)",
"wild sheep (ovis aries)",
"lambs (ovis aries)",
"ovis ovis (ovis aries)"
] | [
"snow sheep (ovis nivicola)",
"ovis canadensis (bighorn sheep)",
"bighorn sheep (ovis canadensis)",
"dall sheep (ovis dalli)"
] | Given the context 'CaPV infections produce similar symptoms in sheep and goats, and the three viruses cannot be distinguished serologically.', answer the user's query. |
What is the biomedical concept corresponding to 'goats'? | [
"goats (capra hircus)",
"domestic goat (capra hircus)",
"goat (capra hircus) (capra hircus)",
"capra aegagrus hircus (capra hircus)",
"capra hircus (capra aegagrus hircus)"
] | [
"wild goat (capra aegagrus)",
"capra aegagrus (capra hircus aegagrus)",
"capra hircus aegagrus (capra aegagrus)",
"capra"
] | Given the context 'CaPV infections produce similar symptoms in sheep and goats, and the three viruses cannot be distinguished serologically.', answer the user's query. |
What is the biomedical concept corresponding to 'goatpox'? | [
"goatpox virus"
] | [
"goatpox virus ghana",
"horsepox virus",
"sealpox virus (seal parapoxvirus)",
"goatpox virus sudan"
] | Given the context 'Since there are conflicting opinions regarding the host specificity of CaPVs, particularly for goatpox and sheeppox viruses, the development of rapid genotyping tools will facilitate more accurate disease diagnosis and surveillance for better management of capripox outbreaks.', answer the user's query. |
What is the biomedical concept corresponding to 'sheeppox viruses'? | [
"sheep pox virus (sheeppox virus)",
"sheeppox virus (sppv (sheeppox virus))",
"sppv (sheeppox virus) (sheeppox virus)"
] | [
"sheeppox virus a",
"swinepox virus",
"goatpox virus",
"cowpox virus (cpxv (cowpox virus))"
] | Given the context 'Since there are conflicting opinions regarding the host specificity of CaPVs, particularly for goatpox and sheeppox viruses, the development of rapid genotyping tools will facilitate more accurate disease diagnosis and surveillance for better management of capripox outbreaks.', answer the user's query. |
What is the biomedical concept corresponding to 'serotype a foot-and-mouth disease virus'? | [
"foot-and-mouth disease virus fmdv (foot-and-mouth disease virus)",
"foot-and-mouth disease virus (fmdv (foot-and-mouth disease virus))",
"foot and mouth disease virus fmdv (foot-and-mouth disease virus)",
"fmdv (foot-and-mouth disease virus) (foot-and-mouth disease virus)",
"foot and mouth disease virus (f... | [
"fmdv-a (foot-and-mouth disease virus a)",
"foot-and-mouth disease virus a (foot-and-mouth disease virus - type a)",
"foot-and-mouth disease virus type a (foot-and-mouth disease virus a)",
"foot-and-mouth disease virus - type a (foot-and-mouth disease virus a)"
] | Given the context 'Multiplex PCR for rapid detection of serotype A foot-and-mouth disease virus variants with amino acid deletion at position 59 of the capsid protein VP3.
', answer the user's query. |
What is the biomedical concept corresponding to 'fmd'? | [
"fmdv (foot-and-mouth disease virus) (foot-and-mouth disease virus)",
"foot-and-mouth disease virus (fmdv (foot-and-mouth disease virus))",
"foot and mouth disease virus fmdv (foot-and-mouth disease virus)",
"foot-and-mouth disease virus fmdv (foot-and-mouth disease virus)",
"foot and mouth disease virus (f... | [
"fmdv-a (foot-and-mouth disease virus a)",
"fmdv-o (foot-and-mouth disease virus o)",
"fmdv-asia1 (foot-and-mouth disease virus asia 1)",
"fmdv-c (foot and mouth disease virus c)"
] | Given the context 'In India, there has been co-circulation, extinction and emergence of genotypes/lineages within serotype A foot-and-mouth disease (FMD) virus.', answer the user's query. |
What is the biomedical concept corresponding to 'fmd'? | [
"fmdv (foot-and-mouth disease virus) (foot-and-mouth disease virus)",
"foot-and-mouth disease virus (fmdv (foot-and-mouth disease virus))",
"foot and mouth disease virus fmdv (foot-and-mouth disease virus)",
"foot-and-mouth disease virus fmdv (foot-and-mouth disease virus)",
"foot and mouth disease virus (f... | [
"fmdv-a (foot-and-mouth disease virus a)",
"fmdv-o (foot-and-mouth disease virus o)",
"fmdv-asia1 (foot-and-mouth disease virus asia 1)",
"fmdv-c (foot and mouth disease virus c)"
] | Given the context 'This development is important for surveillance of FMD in India.
', answer the user's query. |
What is the biomedical concept corresponding to 'lucilia sericata'? | [
"lucilia sericata (common green bottle fly)",
"phaenicia sericata (lucilia sericata)",
"common green bottle fly (lucilia sericata)",
"sheep blowfly (lucilia sericata)",
"musca sericata (lucilia sericata)"
] | [
"sericata sericata",
"triphosa sericata (scotosia sericata)",
"scotosia sericata (triphosa sericata)",
"morawetzia sericata"
] | Given the context 'Conserved function of the Kruppel gap gene in the blowfly Lucilia sericata, despite anterior shift of expression.
', answer the user's query. |
What is the biomedical concept corresponding to 'drosophila melanogaster'? | [
"fruit fly (drosophila melanogaster)",
"drosophila melanogaster (sophophora melanogaster)",
"sophophora melanogaster (drosophila melanogaster)"
] | [
"melanogaster (melanogaster <flies>)",
"bactrocera melanogaster (bactrocera (bactrocera) melanogaster)",
"bactrocera (bactrocera) melanogaster (bactrocera melanogaster)",
"melanogaster <flies> (melanogaster)"
] | Given the context 'To determine whether expression patterns of segmentation genes found in Drosophila melanogaster can be scaled to pattern larger insects, we studied the expression of the Kruppel (Kr) gene in the blowfly Lucilia sericata.', answer the user's query. |
What is the biomedical concept corresponding to 'lucilia sericata'? | [
"lucilia sericata (common green bottle fly)",
"phaenicia sericata (lucilia sericata)",
"common green bottle fly (lucilia sericata)",
"sheep blowfly (lucilia sericata)",
"musca sericata (lucilia sericata)"
] | [
"sericata sericata",
"triphosa sericata (scotosia sericata)",
"scotosia sericata (triphosa sericata)",
"morawetzia sericata"
] | Given the context 'To determine whether expression patterns of segmentation genes found in Drosophila melanogaster can be scaled to pattern larger insects, we studied the expression of the Kruppel (Kr) gene in the blowfly Lucilia sericata.', answer the user's query. |
What is the biomedical concept corresponding to 'drosophila'? | [
"fruit fly (drosophila melanogaster)",
"drosophila melanogaster (sophophora melanogaster)"
] | [
"drosophila (drosophila <basidiomycete fungi>)",
"drosophila (drosophila <flies,genus>)",
"drosophila <basidiomycete fungi> (drosophila)",
"drosophila <flies,genus> (fruit flies)"
] | Given the context 'Compared with Drosophila Kr, L. sericata Kr showed an unexpected 10% shift of expression towards the anterior pole.', answer the user's query. |
What is the biomedical concept corresponding to 'l. sericata'? | [
"lucilia sericata (common green bottle fly)",
"phaenicia sericata (lucilia sericata)",
"sheep blowfly (lucilia sericata)",
"common green bottle fly (lucilia sericata)",
"musca sericata (lucilia sericata)"
] | [
"sericata sericata",
"serica sericea",
"litsea sericea",
"triphosa sericata (scotosia sericata)"
] | Given the context 'Compared with Drosophila Kr, L. sericata Kr showed an unexpected 10% shift of expression towards the anterior pole.', answer the user's query. |
What is the biomedical concept corresponding to 'd. melanogaster'? | [
"fruit fly (drosophila melanogaster)",
"drosophila melanogaster (sophophora melanogaster)"
] | [
"bactrocera (bactrocera) melanogaster (bactrocera melanogaster)",
"bactrocera melanogaster (bactrocera (bactrocera) melanogaster)",
"melanogaster (melanogaster <flies>)",
"melanogaster (melanogaster <basidiomycete fungi>)"
] | Given the context 'Furthermore, expression domains not found in D. melanogaster were present at the blastoderm stage of L. sericata.', answer the user's query. |
What is the biomedical concept corresponding to 'l. sericata'? | [
"lucilia sericata (common green bottle fly)",
"phaenicia sericata (lucilia sericata)",
"sheep blowfly (lucilia sericata)",
"common green bottle fly (lucilia sericata)",
"musca sericata (lucilia sericata)"
] | [
"sericata sericata",
"serica sericea",
"litsea sericea",
"triphosa sericata (scotosia sericata)"
] | Given the context 'Furthermore, expression domains not found in D. melanogaster were present at the blastoderm stage of L. sericata.', answer the user's query. |
What is the biomedical concept corresponding to 'l. sericata'? | [
"lucilia sericata (common green bottle fly)",
"phaenicia sericata (lucilia sericata)",
"sheep blowfly (lucilia sericata)",
"common green bottle fly (lucilia sericata)",
"musca sericata (lucilia sericata)"
] | [
"sericata sericata",
"serica sericea",
"litsea sericea",
"triphosa sericata (scotosia sericata)"
] | Given the context 'We found Kr phenotypes in L. sericata comparable with those observed in D. melanogaster, demonstrating that L. sericata Kr functions as a gap gene as it does in Drosophila.', answer the user's query. |
What is the biomedical concept corresponding to 'd. melanogaster'? | [
"fruit fly (drosophila melanogaster)",
"drosophila melanogaster (sophophora melanogaster)"
] | [
"bactrocera (bactrocera) melanogaster (bactrocera melanogaster)",
"bactrocera melanogaster (bactrocera (bactrocera) melanogaster)",
"melanogaster (melanogaster <flies>)",
"melanogaster (melanogaster <basidiomycete fungi>)"
] | Given the context 'We found Kr phenotypes in L. sericata comparable with those observed in D. melanogaster, demonstrating that L. sericata Kr functions as a gap gene as it does in Drosophila.', answer the user's query. |
What is the biomedical concept corresponding to 'l. sericata'? | [
"lucilia sericata (common green bottle fly)",
"phaenicia sericata (lucilia sericata)",
"sheep blowfly (lucilia sericata)",
"common green bottle fly (lucilia sericata)",
"musca sericata (lucilia sericata)"
] | [
"sericata sericata",
"serica sericea",
"litsea sericea",
"triphosa sericata (scotosia sericata)"
] | Given the context 'We found Kr phenotypes in L. sericata comparable with those observed in D. melanogaster, demonstrating that L. sericata Kr functions as a gap gene as it does in Drosophila.', answer the user's query. |
What is the biomedical concept corresponding to 'drosophila'? | [
"fruit fly (drosophila melanogaster)",
"drosophila melanogaster (sophophora melanogaster)"
] | [
"drosophila (drosophila <basidiomycete fungi>)",
"drosophila (drosophila <flies,genus>)",
"drosophila <basidiomycete fungi> (drosophila)",
"drosophila <flies,genus> (fruit flies)"
] | Given the context 'We found Kr phenotypes in L. sericata comparable with those observed in D. melanogaster, demonstrating that L. sericata Kr functions as a gap gene as it does in Drosophila.', answer the user's query. |
What is the biomedical concept corresponding to 'human'? | [
"human (homo sapiens)",
"homo sapiens (human)"
] | [
"humans (homo)",
"homo (humans)",
"macrobiotus sapiens",
"glossus humanus (cardium humanum)"
] | Given the context 'The increasing global crisis in NCDs is a barrier to development goals including poverty reduction, health equity, economic stability, and human security.', answer the user's query. |
What is the biomedical concept corresponding to 'tobacco'? | [
"common tobacco (nicotiana tabacum)",
"tobacco (nicotiana tabacum)",
"nicotiana tabacum (american tobacco)",
"american tobacco (nicotiana tabacum)"
] | [
"wild tobacco (nicotiana rustica)",
"tree tobacco (nicotiana glauca)",
"ornamental tobacco (nicotiana alata)",
"flowering tobacco (nicotiana alata)"
] | Given the context 'The Lancet NCD Action Group and the NCD Alliance propose five overarching priority actions for the response to the crisis--leadership, prevention, treatment, international cooperation, and monitoring and accountability--and the delivery of five priority interventions--tobacco control, salt reduction, improved diets and physical activity, reduction in hazardous alcohol intake, and essential drugs and technologies.', answer the user's query. |
What is the biomedical concept corresponding to 'tobacco'? | [
"common tobacco (nicotiana tabacum)",
"tobacco (nicotiana tabacum)",
"nicotiana tabacum (american tobacco)",
"american tobacco (nicotiana tabacum)"
] | [
"wild tobacco (nicotiana rustica)",
"tree tobacco (nicotiana glauca)",
"ornamental tobacco (nicotiana alata)",
"flowering tobacco (nicotiana alata)"
] | Given the context 'The most urgent and immediate priority is tobacco control.', answer the user's query. |
What is the biomedical concept corresponding to 'tobacco'? | [
"common tobacco (nicotiana tabacum)",
"tobacco (nicotiana tabacum)",
"nicotiana tabacum (american tobacco)",
"american tobacco (nicotiana tabacum)"
] | [
"wild tobacco (nicotiana rustica)",
"tree tobacco (nicotiana glauca)",
"ornamental tobacco (nicotiana alata)",
"flowering tobacco (nicotiana alata)"
] | Given the context 'We propose as a goal for 2040, a world essentially free from tobacco where less than 5% of people use tobacco.', answer the user's query. |
What is the biomedical concept corresponding to 'perigord black truffle'? | [
"perigord truffle (tuber melanosporum)",
"black truffle (tuber melanosporum)",
"french truffle (tuber melanosporum)"
] | [
"red-grained black truffle (tuber aestivum)",
"chinese black truffle (tuber himalayense)",
"polytrichum perigoniale",
"tuber aestivum (red-grained black truffle)"
] | Given the context 'The Perigord black truffle responds to cold temperature with an extensive reprogramming of its transcriptional activity.
', answer the user's query. |
What is the biomedical concept corresponding to 'tuber melanosporum'? | [
"tuber melanosporum (perigord truffle)",
"french truffle (tuber melanosporum)",
"black truffle (tuber melanosporum)",
"perigord truffle (tuber melanosporum)"
] | [
"tuber melosporum (picoa melospora)",
"tuber melanorufum",
"tuber polymorphosporum",
"picoa melospora (tuber melosporum)"
] | Given the context 'The Tuber melanosporum genome has been analysed with the aim of identifying and characterizing the genes involved in the environmental stress response.', answer the user's query. |
What is the biomedical concept corresponding to 'auritidibacter ignavus gen. nov., sp. nov.'? | [
"auritidibacter ignavus"
] | [
"auritidibacter sp.",
"aurantiacibacter flavus",
"anaeramoeba ignava",
"aurantiacibacter gilvus"
] | Given the context 'Auritidibacter ignavus gen. nov., sp. nov., of the family Micrococcaceae isolated from an ear swab of a man with otitis externa, transfer of the members of the family Yaniellaceae Li et al. 2008 to the family Micrococcaceae and emended description of the suborder Micrococcineae.
', answer the user's query. |
What is the biomedical concept corresponding to 'auritidibacter ignavus gen. nov., sp. nov.'? | [
"auritidibacter ignavus"
] | [
"auritidibacter sp.",
"aurantiacibacter flavus",
"anaeramoeba ignava",
"aurantiacibacter gilvus"
] | Given the context 'Based on its distinctive genotypic and phenotypic characteristics, strain IMMIB L-1656(T) represents a novel species in a novel genus, for which the name Auritidibacter ignavus gen. nov., sp. nov. is proposed.', answer the user's query. |
What is the biomedical concept corresponding to 'auritidibacter ignavus'? | [
"auritidibacter ignavus"
] | [
"anaeramoeba ignava",
"aurantiacibacter flavus",
"aurantiacibacter gilvus",
"aspergillus igneus"
] | Given the context 'The type strain of Auritidibacter ignavus is IMMIB L-1656(T) (=DSM 45359(T) =CCUG 57943(T)).
', answer the user's query. |
What is the biomedical concept corresponding to 'human'? | [
"human (homo sapiens)",
"homo sapiens (human)"
] | [
"humans (homo)",
"homo (humans)",
"macrobiotus sapiens",
"glossus humanus (cardium humanum)"
] | Given the context 'The rapid production of high-titer porcine endogenous retrovirus(PERV)-B env pseudotype and construction of an EGFP-expressing replication competent PERV-A vector.
Porcine endogenous retroviruses (PERVs) present a unique concern associated with xenotransplantation because they have been shown to infect certain human cells in vitro and it is also difficult to generate herds of pigs free of PERVs.', answer the user's query. |
What is the biomedical concept corresponding to 'pigs'? | [
"swine (sus scrofa)",
"pigs (sus scrofa) (sus scrofa)",
"pig (sus scrofa) (sus scrofa)",
"sus scrofa (pigs (sus scrofa))",
"wild boar (sus scrofa)"
] | [
"domestic pig (sus scrofa domesticus)",
"sus domestica (sus scrofa domesticus)",
"sus domesticus (sus scrofa domesticus)",
"pigs (suidae) (suidae)"
] | Given the context 'The rapid production of high-titer porcine endogenous retrovirus(PERV)-B env pseudotype and construction of an EGFP-expressing replication competent PERV-A vector.
Porcine endogenous retroviruses (PERVs) present a unique concern associated with xenotransplantation because they have been shown to infect certain human cells in vitro and it is also difficult to generate herds of pigs free of PERVs.', answer the user's query. |
What is the biomedical concept corresponding to 'retroviral'? | [
"retrovirus (unidentified retrovirus)",
"unidentified retrovirus (retrovirus)"
] | [
"retroviral provirus",
"avian retrovirus",
"avian retroviruses",
"retroviridae"
] | Given the context 'To improve the MLV-based retroviral vector system, a 2.1-kb PERV-B env product was amplified from PK-15 genomic DNA and cloned into the pCL-Eco retroviral vector.', answer the user's query. |
What is the biomedical concept corresponding to 'retroviral'? | [
"retrovirus (unidentified retrovirus)",
"unidentified retrovirus (retrovirus)"
] | [
"retroviral provirus",
"avian retrovirus",
"avian retroviruses",
"retroviridae"
] | Given the context 'In contrast, the titer of lacZ (PERV-B) from a conventional murine retroviral vector (split genome) was found to be 1.2x10(2) CFU/ml when the PERV-B env expression vector was transfected into TELCeB6 cells, which harbor MFGnlslacZ and the gag-pol-expressing vector.', answer the user's query. |
What is the biomedical concept corresponding to 'aspergillus oryzae'? | [
"aspergillus oryzae (aspergillus oryzae (ahlb.) cohn, 1884)",
"aspergillus oryzae (ahlb.) cohn, 1884 (aspergillus oryzae)",
"eurotium oryzae (aspergillus oryzae)",
"aspergillus flavus var. oryzae (aspergillus oryzae)"
] | [
"nigrospora oryzae (monotospora oryzae)",
"monotospora oryzae (nigrospora oryzae)",
"amorphomonas oryzae ('amorphomonas oryzae')",
"sclerotium oryzae (nakataea oryzae)"
] | Given the context 'Identification and characterization of a putative basic helix-loop-helix transcription factor involved in the early stage of conidiophore development in Aspergillus oryzae.
', answer the user's query. |
What is the biomedical concept corresponding to 'aspergillus oryzae'? | [
"aspergillus oryzae (aspergillus oryzae (ahlb.) cohn, 1884)",
"aspergillus oryzae (ahlb.) cohn, 1884 (aspergillus oryzae)",
"eurotium oryzae (aspergillus oryzae)",
"aspergillus flavus var. oryzae (aspergillus oryzae)"
] | [
"nigrospora oryzae (monotospora oryzae)",
"monotospora oryzae (nigrospora oryzae)",
"amorphomonas oryzae ('amorphomonas oryzae')",
"sclerotium oryzae (nakataea oryzae)"
] | Given the context 'In this study, we isolated and characterized a novel predicted bHLH protein-encoding gene, AO090023000902, designated ecdR (early conidiophore development regulator), in Aspergillus oryzae.', answer the user's query. |
What is the biomedical concept corresponding to 'yeast'? | [
"saccharomyces cerevisiae (saccharomyces cerevisiae (desm.) meyen ex e.c. hansen, 1883)",
"baker's yeast (saccharomyces cerevisiae)",
"saccharomyces cerevisiae (desm.) meyen ex e.c. hansen, 1883 (saccharomyces cerevisiae)",
"mycoderma cerevisiae (saccharomyces cerevisiae)",
"brewer's yeast (saccharomyces ce... | [
"saccharomyces lactis (kluyveromyces lactis)",
"saccharomyces hansenii (debaryomyces hansenii)",
"saccharomyces albicans (candida albicans)",
"saccharomyces globosus (saccharomyces uvarum)"
] | Given the context 'Yeast two-hybrid assays and sclR, ecdR-double deletion experiment indicated that EcdR plays a major role in conidiation, and SclR represses this function by competitively interacting with EcdR in A. oryzae.
', answer the user's query. |
What is the biomedical concept corresponding to 'a. oryzae'? | [
"aspergillus oryzae (aspergillus oryzae (ahlb.) cohn, 1884)",
"aspergillus oryzae (ahlb.) cohn, 1884 (aspergillus oryzae)",
"eurotium oryzae (aspergillus oryzae)"
] | [
"amorphomonas oryzae ('amorphomonas oryzae')",
"'amorphomonas oryzae' (amorphomonas oryzae)",
"nigrospora oryzae (monotospora oryzae)",
"acinetobacter oryzae"
] | Given the context 'Yeast two-hybrid assays and sclR, ecdR-double deletion experiment indicated that EcdR plays a major role in conidiation, and SclR represses this function by competitively interacting with EcdR in A. oryzae.
', answer the user's query. |
What is the biomedical concept corresponding to 'grey-crowned babbler'? | [
"gray-crowned babbler (pomatostomus temporalis)"
] | [
"grey-headed babbler (stachyris poliocephala)",
"large grey babbler (argya malcolmi)",
"yellow-billed babbler (argya affinis)",
"grey-throated warbler (myiothlypis cinereicollis)"
] | Given the context 'The absence of sex-biased dispersal in the cooperatively breeding grey-crowned babbler.
', answer the user's query. |
What is the biomedical concept corresponding to 'grey-crowned babbler'? | [
"gray-crowned babbler (pomatostomus temporalis)"
] | [
"grey-headed babbler (stachyris poliocephala)",
"large grey babbler (argya malcolmi)",
"yellow-billed babbler (argya affinis)",
"grey-throated warbler (myiothlypis cinereicollis)"
] | Given the context '2. Disrupted dispersal is a purported cause of decline in the Australian grey-crowned babbler (Pomatostomus temporalis).', answer the user's query. |
What is the biomedical concept corresponding to 'pomatostomus temporalis'? | [
"pomatostomus temporalis (pomatorhinus temporalis)",
"pomatorhinus temporalis (pomatostomus temporalis)",
"gray-crowned babbler (pomatostomus temporalis)"
] | [
"heptapsogaster temporalis",
"gymnobothrus temporalis (epacromia temporalis)",
"diaparsis temporalis",
"epacromia temporalis (gymnobothrus temporalis)"
] | Given the context '2. Disrupted dispersal is a purported cause of decline in the Australian grey-crowned babbler (Pomatostomus temporalis).', answer the user's query. |
What is the biomedical concept corresponding to 'grey-crowned babblers'? | [
"gray-crowned babbler (pomatostomus temporalis)"
] | [
"grey-headed babbler (stachyris poliocephala)",
"black-chinned babbler (cyanoderma pyrrhops)",
"large grey babbler (argya malcolmi)",
"common babbler (argya caudata)"
] | Given the context 'As both sexes appear to help, but only male helpers boost fledgling production, we hypothesized that males would be the more philopatric sex in this species, and that female grey-crowned babblers would disperse over greater distances.', answer the user's query. |
What is the biomedical concept corresponding to 'plasmodiophora brassicae'? | [
"plasmodiophora brassicae"
] | [
"phytophthora brassicae",
"pestalotia brassicae (pestalotiopsis brassicae)",
"pestalotiopsis brassicae (pestalotia brassicae)",
"pyrenopeziza brassicae"
] | Given the context 'We report on an in-vitro dual culture system of the plasmodiophorids Plasmodiophora brassicae and Spongospora subterranea with their respective plant hosts, Brassica rapa and Solanum tuberosum.', answer the user's query. |
What is the biomedical concept corresponding to 'spongospora subterranea'? | [
"spongospora subterranea"
] | [
"melanospora subterranea",
"solenopsis subterranea",
"stygocapitella subterranea",
"roesleria subterranea (pilacre subterranea)"
] | Given the context 'We report on an in-vitro dual culture system of the plasmodiophorids Plasmodiophora brassicae and Spongospora subterranea with their respective plant hosts, Brassica rapa and Solanum tuberosum.', answer the user's query. |
What is the biomedical concept corresponding to 'brassica rapa'? | [
"brassica rapa (field mustard)",
"field mustard (brassica rapa)"
] | [
"brassica oleracea (wild cabbage)",
"brassica juncea (sinapis juncea)",
"brassica nigra (black mustard)",
"brassica insularis (brassica atlantica)"
] | Given the context 'We report on an in-vitro dual culture system of the plasmodiophorids Plasmodiophora brassicae and Spongospora subterranea with their respective plant hosts, Brassica rapa and Solanum tuberosum.', answer the user's query. |
What is the biomedical concept corresponding to 'solanum tuberosum'? | [
"potato (solanum tuberosum)",
"potatoes (solanum tuberosum)"
] | [
"solanum tomentosum (solanum ferox mill. ex dunal, 1852)",
"solanum vicinum",
"solanum rugosum",
"solanum trifolium"
] | Given the context 'We report on an in-vitro dual culture system of the plasmodiophorids Plasmodiophora brassicae and Spongospora subterranea with their respective plant hosts, Brassica rapa and Solanum tuberosum.', answer the user's query. |
What is the biomedical concept corresponding to 's. subterranea'? | [
"spongospora subterranea"
] | [
"sollasipelta subterranea",
"solenopsis subterranea",
"scolopendra subterranea (stigmatogaster subterranea)",
"stygocapitella subterranea"
] | Given the context 'We show that callus cultures harbouring S. subterranea provide an excellent starting material for gene discovery from this organism by constructing a pilot-scale DNA library.', answer the user's query. |
What is the biomedical concept corresponding to 's. subterranea'? | [
"spongospora subterranea"
] | [
"sollasipelta subterranea",
"solenopsis subterranea",
"scolopendra subterranea (stigmatogaster subterranea)",
"stygocapitella subterranea"
] | Given the context 'Bioinformatic analysis of the sequences established that almost all of the DNA clones from this library were from S. subterranea rather than the plant host.', answer the user's query. |
What is the biomedical concept corresponding to 'l. chlorophorum'? | [
"lepidodinium chlorophorum (gymnodinium chlorophorum)",
"gymnodinium chlorophorum (lepidodinium chlorophorum)"
] | [
"chlorophytum longifolium",
"gavilea littoralis (chloraea littoralis)",
"chloraea littoralis (gavilea littoralis)",
"phytophthora foliorum"
] | Given the context 'In this study, we sequenced plastid-encoded genes from L. chlorophorum, one pedinophyte species, one ulvophyte species, and six prasinophyte species.', answer the user's query. |
What is the biomedical concept corresponding to 'l. chlorophorum'? | [
"lepidodinium chlorophorum (gymnodinium chlorophorum)",
"gymnodinium chlorophorum (lepidodinium chlorophorum)"
] | [
"chlorophytum longifolium",
"gavilea littoralis (chloraea littoralis)",
"chloraea littoralis (gavilea littoralis)",
"phytophthora foliorum"
] | Given the context 'All the analyses of the 11-protein data set robustly grouped L. chlorophorum with members of the "core chlorophytes." Thus, we here propose that Lepidodinium plastids are of core chlorophyte origin.
', answer the user's query. |
What is the biomedical concept corresponding to 'aspergillus nidulans'? | [
"aspergillus nidulans (aspergillus nidulans (eidam) g. winter, 1884)",
"aspergillus nidulans (eidam) g. winter, 1884 (aspergillus nidulans)",
"aspergillus nidulellus (aspergillus nidulans)",
"emericella nidulans (aspergillus nidulans)"
] | [
"aspergillus neoellipticus (aspergillus fumigatus)",
"aspergillus fumigatus fresen., 1863 (aspergillus fumigatus)",
"aphanothece nidulans",
"aspergillus oryzae (aspergillus oryzae (ahlb.) cohn, 1884)"
] | Given the context 'Cross-talk between light and glucose regulation controls toxin production and morphogenesis in Aspergillus nidulans.
', answer the user's query. |
What is the biomedical concept corresponding to 'aspergillus nidulans'? | [
"aspergillus nidulans (aspergillus nidulans (eidam) g. winter, 1884)",
"aspergillus nidulans (eidam) g. winter, 1884 (aspergillus nidulans)",
"aspergillus nidulellus (aspergillus nidulans)",
"emericella nidulans (aspergillus nidulans)"
] | [
"aspergillus neoellipticus (aspergillus fumigatus)",
"aspergillus fumigatus fresen., 1863 (aspergillus fumigatus)",
"aphanothece nidulans",
"aspergillus oryzae (aspergillus oryzae (ahlb.) cohn, 1884)"
] | Given the context 'In this study we show that in Aspergillus nidulans the effect of light on the production of the sterigmatocystin (ST) toxin depends on the glucose concentration.', answer the user's query. |
What is the biomedical concept corresponding to 'hortaea werneckii'? | [
"hortaea werneckii (cladosporium werneckii)",
"cladosporium werneckii (hortaea werneckii)"
] | [
"hortaea werneckii exf-2000",
"cyathea werffii",
"helichrysum fleckii",
"ipomoea wangii"
] | Given the context 'Identification and characterization of putative osmosensors, HwSho1A and HwSho1B, from the extremely halotolerant black yeast Hortaea werneckii.
', answer the user's query. |
What is the biomedical concept corresponding to 'saccharomyces cerevisiae'? | [
"saccharomyces cerevisiae (saccharomyces cerevisiae (desm.) meyen ex e.c. hansen, 1883)",
"saccharomyces cerevisiae (desm.) meyen ex e.c. hansen, 1883 (saccharomyces cerevisiae)",
"baker's yeast (saccharomyces cerevisiae)",
"mycoderma cerevisiae (saccharomyces cerevisiae)",
"saccharomyces italicus (saccharo... | [
"saccharomyces globosus (saccharomyces uvarum)",
"saccharomyces lactis (kluyveromyces lactis)",
"saccharomyces albicans (candida albicans)",
"saccharomyces hansenii (debaryomyces hansenii)"
] | Given the context 'In Saccharomyces cerevisiae, the Sho1 protein is one of two potential osmosensors that can activate the kinase cascade of the HOG pathway in response to increased extracellular osmolarity.', answer the user's query. |
What is the biomedical concept corresponding to 'hortaea werneckii'? | [
"hortaea werneckii (cladosporium werneckii)",
"cladosporium werneckii (hortaea werneckii)"
] | [
"hortaea werneckii exf-2000",
"cyathea werffii",
"helichrysum fleckii",
"ipomoea wangii"
] | Given the context 'Two novel SHO1-like genes, HwSHO1A and HwSHO1B, have been cloned from the saltern-inhabiting, extremely halotolerant black yeast Hortaea werneckii.', answer the user's query. |
What is the biomedical concept corresponding to 's. cerevisae'? | [
"saccharomyces cerevisiae (saccharomyces cerevisiae (desm.) meyen ex e.c. hansen, 1883)",
"saccharomyces cerevisiae (desm.) meyen ex e.c. hansen, 1883 (saccharomyces cerevisiae)",
"baker's yeast (saccharomyces cerevisiae)",
"saccharomyces italicus (saccharomyces cerevisiae)",
"brewer's yeast (saccharomyces ... | [
"saccharomyces globosus (saccharomyces uvarum)",
"saccharomyces hansenii (debaryomyces hansenii)",
"saccharomyces lactis (kluyveromyces lactis)",
"saccharomycodes"
] | Given the context 'When the HwSHO1 genes were transferred into S. cerevisae cells lacking the SHO1 gene, both of the HwSho1 isoforms fully complemented the function of the native S. cerevisiae Sho1 protein.', answer the user's query. |
What is the biomedical concept corresponding to 's. cerevisiae'? | [
"saccharomyces cerevisiae (saccharomyces cerevisiae (desm.) meyen ex e.c. hansen, 1883)",
"saccharomyces cerevisiae (desm.) meyen ex e.c. hansen, 1883 (saccharomyces cerevisiae)",
"baker's yeast (saccharomyces cerevisiae)",
"mycoderma cerevisiae (saccharomyces cerevisiae)",
"saccharomyces italicus (saccharo... | [
"saccharomyces lactis (kluyveromyces lactis)",
"saccharomyces globosus (saccharomyces uvarum)",
"saccharomyces albicans (candida albicans)",
"saccharomyces hansenii (debaryomyces hansenii)"
] | Given the context 'When the HwSHO1 genes were transferred into S. cerevisae cells lacking the SHO1 gene, both of the HwSho1 isoforms fully complemented the function of the native S. cerevisiae Sho1 protein.', answer the user's query. |
What is the biomedical concept corresponding to 's. cerevisiae'? | [
"saccharomyces cerevisiae (saccharomyces cerevisiae (desm.) meyen ex e.c. hansen, 1883)",
"saccharomyces cerevisiae (desm.) meyen ex e.c. hansen, 1883 (saccharomyces cerevisiae)",
"baker's yeast (saccharomyces cerevisiae)",
"mycoderma cerevisiae (saccharomyces cerevisiae)",
"saccharomyces italicus (saccharo... | [
"saccharomyces lactis (kluyveromyces lactis)",
"saccharomyces globosus (saccharomyces uvarum)",
"saccharomyces albicans (candida albicans)",
"saccharomyces hansenii (debaryomyces hansenii)"
] | Given the context 'Through microscopic and biochemical validation, we demonstrate that in S. cerevisiae, both of the HwSho1 proteins have characteristic subcellular localizations similar to the S. cerevisiae Sho1 protein, and they can both activate the HOG pathway under conditions of osmotic stress.', answer the user's query. |
What is the biomedical concept corresponding to 's. cerevisiae'? | [
"saccharomyces cerevisiae (saccharomyces cerevisiae (desm.) meyen ex e.c. hansen, 1883)",
"saccharomyces cerevisiae (desm.) meyen ex e.c. hansen, 1883 (saccharomyces cerevisiae)",
"baker's yeast (saccharomyces cerevisiae)",
"mycoderma cerevisiae (saccharomyces cerevisiae)",
"saccharomyces italicus (saccharo... | [
"saccharomyces lactis (kluyveromyces lactis)",
"saccharomyces globosus (saccharomyces uvarum)",
"saccharomyces albicans (candida albicans)",
"saccharomyces hansenii (debaryomyces hansenii)"
] | Given the context 'Through microscopic and biochemical validation, we demonstrate that in S. cerevisiae, both of the HwSho1 proteins have characteristic subcellular localizations similar to the S. cerevisiae Sho1 protein, and they can both activate the HOG pathway under conditions of osmotic stress.', answer the user's query. |
What is the biomedical concept corresponding to 's. cerevisiae'? | [
"saccharomyces cerevisiae (saccharomyces cerevisiae (desm.) meyen ex e.c. hansen, 1883)",
"saccharomyces cerevisiae (desm.) meyen ex e.c. hansen, 1883 (saccharomyces cerevisiae)",
"baker's yeast (saccharomyces cerevisiae)",
"mycoderma cerevisiae (saccharomyces cerevisiae)",
"saccharomyces italicus (saccharo... | [
"saccharomyces lactis (kluyveromyces lactis)",
"saccharomyces globosus (saccharomyces uvarum)",
"saccharomyces albicans (candida albicans)",
"saccharomyces hansenii (debaryomyces hansenii)"
] | Given the context 'To a lower extent, crosstalk to the mating pathway expressing HwSho1 proteins is conserved in the PBS2 deleted S. cerevisiae strain.', answer the user's query. |
What is the biomedical concept corresponding to 'h. werneckii'? | [
"hortaea werneckii (cladosporium werneckii)",
"cladosporium werneckii (hortaea werneckii)"
] | [
"hydrogenophilus hirschii (hydrogenothermophilus hirschii)",
"helichrysum fleckii",
"helicius chikunii",
"hortaea werneckii exf-2000"
] | Given the context 'These data show that the HwSho1 proteins from H. werneckii are true functional homologs of the Sho1 protein of S. cerevisiae.
', answer the user's query. |
What is the biomedical concept corresponding to 's. cerevisiae'? | [
"saccharomyces cerevisiae (saccharomyces cerevisiae (desm.) meyen ex e.c. hansen, 1883)",
"saccharomyces cerevisiae (desm.) meyen ex e.c. hansen, 1883 (saccharomyces cerevisiae)",
"baker's yeast (saccharomyces cerevisiae)",
"mycoderma cerevisiae (saccharomyces cerevisiae)",
"saccharomyces italicus (saccharo... | [
"saccharomyces lactis (kluyveromyces lactis)",
"saccharomyces globosus (saccharomyces uvarum)",
"saccharomyces albicans (candida albicans)",
"saccharomyces hansenii (debaryomyces hansenii)"
] | Given the context 'These data show that the HwSho1 proteins from H. werneckii are true functional homologs of the Sho1 protein of S. cerevisiae.
', answer the user's query. |
What is the biomedical concept corresponding to 'coprinopsis cinerea'? | [
"coprinus cinereus (coprinopsis cinerea)",
"agaricus cinereus (coprinopsis cinerea)",
"coprinopsis cinerea (hormographiella aspergillata)",
"coprinus macrorhizus (coprinopsis cinerea)"
] | [
"copiapoa cinerea",
"coprinopsis cineraria (psathyrella cineraria)",
"pseudapis cinerea",
"procellaria cinerea"
] | Given the context 'A mutation in the Cc.ubc2 gene affects clamp cell morphogenesis as well as nuclear migration for dikaryosis in Coprinopsis cinerea.
', answer the user's query. |
What is the biomedical concept corresponding to 'coprinopsis cinerea'? | [
"coprinus cinereus (coprinopsis cinerea)",
"agaricus cinereus (coprinopsis cinerea)",
"coprinopsis cinerea (hormographiella aspergillata)",
"coprinus macrorhizus (coprinopsis cinerea)"
] | [
"copiapoa cinerea",
"coprinopsis cineraria (psathyrella cineraria)",
"pseudapis cinerea",
"procellaria cinerea"
] | Given the context 'The formation and proliferation of the dikaryon in the agaricomycete Coprinopsis cinerea is controlled by the mating type genes, A and B. The B genes, which encode pheromones and pheromone receptors, control nuclear migration for dikaryosis as well as the fusion of the clamp cell with the subterminal cell while the A genes, which encode two classes of homeodomain proteins, control conjugate nuclear division associated with clamp connection development.', answer the user's query. |
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