query stringlengths 53 100 | positive listlengths 1 5 | negative listlengths 1 4 | system stringlengths 68 790 |
|---|---|---|---|
What is the biomedical concept corresponding to 'sordaria macrospora'? | [
"sordaria macrospora"
] | [
"sclerophthora macrospora",
"truncospora macrospora",
"apiosporella macrospora (ascochyta macrospora)",
"sordaria macrospora k-hell"
] | Given the context 'The perithecium of the self-fertile ascomycete Sordaria macrospora provides an excellent model in which to analyse fungal multicellular development.', answer the user's query. |
What is the biomedical concept corresponding to 's. macrospora'? | [
"sordaria macrospora"
] | [
"sarcotrochila macrospora",
"neocosmospora macrospora (fusarium macrosporum)",
"sphaeria macrospora (asteromassaria macrospora)",
"sclerophthora macrospora"
] | Given the context 'This study provides a detailed analysis of perithecium morphogenesis in the wild type and eight developmental mutants of S. macrospora, using a range of correlative microscopical techniques.', answer the user's query. |
What is the biomedical concept corresponding to 'fusarium graminearum complex'? | [
"fusarium graminearum (gibberella zeae (schwein.) petch, 1936)",
"gibberella zeae (fusarium graminearum)"
] | [
"fusarium solani complex (fusarium solani species complex)",
"fusarium graminum",
"fusarium fujikuroi species complex (gibberella fujikuroi complex)",
"fusarium moniliforme (fusarium verticillioides)"
] | Given the context 'This study was conducted to assess evolutionary relationships, species diversity and trichothecene toxin potential of five Fusarium graminearum complex (FGSC) isolates identified as genetically novel during prior Fusarium head blight (FHB) surveys in Nepal and Louisiana.', answer the user's query. |
What is the biomedical concept corresponding to 'fusarium nepalense'? | [
"fusarium graminearum (gibberella zeae (schwein.) petch, 1936)"
] | [
"fusarium nepalense",
"fusarium graminum",
"fusarium sudanense",
"fusarium hainanense"
] | Given the context 'Fusarium nepalense was resolved as the sister lineage of Fusarium ussurianum+Fusarium asiaticum within an Asian subclade of the FGSC.', answer the user's query. |
What is the biomedical concept corresponding to 'fusarium louisianense'? | [
"fusarium graminearum (gibberella zeae (schwein.) petch, 1936)"
] | [
"fusarium louisianense",
"fusarium louisalawsoniae",
"fusarium sudanense",
"fusarium alpinum"
] | Given the context 'Fusarium louisianense was strongly supported as a reciprocally monophyletic sister of Fusarium gerlachii+F. graminearum, suggesting that this subclade might be endemic to North America.', answer the user's query. |
What is the biomedical concept corresponding to 'fusarium gerlachii+f. graminearum'? | [
"fusarium graminearum (gibberella zeae (schwein.) petch, 1936)",
"gibberella zeae (fusarium graminearum)"
] | [
"fusarium graminum",
"fusarium moniliforme (fusarium verticillioides)",
"fusarium verticillioides (fusarium moniliforme j. sheld., 1904)",
"fusisporium cerealis (fusarium cerealis)"
] | Given the context 'Fusarium louisianense was strongly supported as a reciprocally monophyletic sister of Fusarium gerlachii+F. graminearum, suggesting that this subclade might be endemic to North America.', answer the user's query. |
What is the biomedical concept corresponding to 'f. graminearum'? | [
"fusarium graminearum (gibberella zeae (schwein.) petch, 1936)",
"gibberella zeae (fusarium graminearum)",
"gibberella zeae (schwein.) petch, 1936 (fusarium graminearum)",
"sphaeria zeae (fusarium graminearum)"
] | [
"fusarium graminum",
"fusisporium cerealis (fusarium cerealis)",
"fusisporium avenaceum (fusarium avenaceum)",
"fusarium praegraminearum"
] | Given the context 'Multilocus Bayesian species tree analyses augment these results and provide evidence for a distinct lineage within F. graminearum predominately from the Gulf Coast of Louisiana.', answer the user's query. |
What is the biomedical concept corresponding to 'f. nepalense'? | [
"fusarium graminearum (gibberella zeae (schwein.) petch, 1936)"
] | [
"fusarium nepalense",
"fusarium graminum",
"fusarium fabacearum",
"fusarium praegraminearum"
] | Given the context 'As predicted by the MLGT assay, mycotoxin analyses demonstrated that F. nepalense and F. louisianense could produce 15ADON and nivalenol, respectively, in planta.', answer the user's query. |
What is the biomedical concept corresponding to 'f. louisianense'? | [
"fusarium graminearum (gibberella zeae (schwein.) petch, 1936)"
] | [
"fusarium louisianense",
"fusarium graminum",
"fusarium fecundum",
"fusarium floridanum"
] | Given the context 'As predicted by the MLGT assay, mycotoxin analyses demonstrated that F. nepalense and F. louisianense could produce 15ADON and nivalenol, respectively, in planta.', answer the user's query. |
What is the biomedical concept corresponding to 'moose'? | [
"european elk, moose (alces alces)",
"alces alces (european elk, moose)"
] | [
"moose (alces americanus)",
"american moose (alces americanus)",
"alaskan moose (alces alces gigas)",
"domestic goose (anser anser)"
] | Given the context '4. We then tested our approached empirically using 108 wild Global Positioning System (GPS)-collared moose Alces alces in Scandinavia as a study system because they exhibit a wide range of movement behaviours, including resident, migrating and dispersing individuals, within the same population.', answer the user's query. |
What is the biomedical concept corresponding to 'alces alces'? | [
"alces alces (european elk, moose)",
"eurasian elk (alces alces)",
"elk (alces alces) (alces alces)",
"cervus alces (alces alces)",
"european elk, moose (alces alces)"
] | [
"alces alces americana (alces americanus)",
"alces americanus (alces alces americana)",
"european elk (alces alces alces)",
"alces"
] | Given the context '4. We then tested our approached empirically using 108 wild Global Positioning System (GPS)-collared moose Alces alces in Scandinavia as a study system because they exhibit a wide range of movement behaviours, including resident, migrating and dispersing individuals, within the same population.', answer the user's query. |
What is the biomedical concept corresponding to 'maize'? | [
"maize (zea mays)",
"zea mays (zea mays var. japonica)"
] | [
"corn earworm (helicoverpa zea)",
"maize (zea mays subsp. mays)",
"zea perennis (perennial teosinte)",
"zea ramosa (zea mays subsp. mays)"
] | Given the context 'Host plant secondary metabolite profiling shows a complex, strain-dependent response of maize to plant growth-promoting rhizobacteria of the genus Azospirillum.
', answer the user's query. |
What is the biomedical concept corresponding to 'maize'? | [
"maize (zea mays)",
"zea mays (zea mays var. japonica)"
] | [
"corn earworm (helicoverpa zea)",
"maize (zea mays subsp. mays)",
"zea perennis (perennial teosinte)",
"zea ramosa (zea mays subsp. mays)"
] | Given the context 'These effects were assessed by comparing the early impacts of three Azospirillum inoculant strains on secondary metabolite profiles of two different maize (Zea mays) cultivars.', answer the user's query. |
What is the biomedical concept corresponding to 'zea mays'? | [
"maize (zea mays)",
"zea mays (zea mays var. japonica)",
"zea mays var. japonica (zea mays)"
] | [
"zea ramosa (zea mays subsp. mays)",
"zea perennis (perennial teosinte)",
"corn earworm (helicoverpa zea)",
"zela zeus"
] | Given the context 'These effects were assessed by comparing the early impacts of three Azospirillum inoculant strains on secondary metabolite profiles of two different maize (Zea mays) cultivars.', answer the user's query. |
What is the biomedical concept corresponding to 'maize'? | [
"maize (zea mays)",
"zea mays (zea mays var. japonica)"
] | [
"corn earworm (helicoverpa zea)",
"maize (zea mays subsp. mays)",
"zea perennis (perennial teosinte)",
"zea ramosa (zea mays subsp. mays)"
] | Given the context 'After 10d of growth in nonsterile soil, maize methanolic extracts were analyzed by reverse-phase high-performance liquid chromatography (RP-HPLC) and secondary metabolites identified by liquid chromatography/mass spectrometry (LC/MS) and nuclear magnetic resonance (NMR).', answer the user's query. |
What is the biomedical concept corresponding to 'maize'? | [
"maize (zea mays)",
"zea mays (zea mays var. japonica)"
] | [
"corn earworm (helicoverpa zea)",
"maize (zea mays subsp. mays)",
"zea perennis (perennial teosinte)",
"zea ramosa (zea mays subsp. mays)"
] | Given the context 'In parallel, Azospirillum inoculation led to major qualitative and quantitative modifications of the contents of secondary metabolites, especially benzoxazinoids, in the maize plants.', answer the user's query. |
What is the biomedical concept corresponding to 'maize'? | [
"maize (zea mays)",
"zea mays (zea mays var. japonica)"
] | [
"corn earworm (helicoverpa zea)",
"maize (zea mays subsp. mays)",
"zea perennis (perennial teosinte)",
"zea ramosa (zea mays subsp. mays)"
] | Given the context 'Thus, Azospirillum inoculation resulted in early, strain-dependent modifications in the biosynthetic pathways of benzoxazine derivatives in maize in compatible interactions.', answer the user's query. |
What is the biomedical concept corresponding to 'candida albicans'? | [
"saccharomyces albicans (candida albicans)",
"monilia albicans (candida albicans)",
"mycotorula albicans (candida albicans)",
"oidium albicans (candida albicans)",
"endomyces albicans (candida albicans)"
] | [
"ozoroa albicans",
"athletes albicans",
"fibroporia albicans",
"cyathopsis albicans (styphelia albicans)"
] | Given the context 'Activation of the heat shock transcription factor Hsf1 is essential for the full virulence of the fungal pathogen Candida albicans.
', answer the user's query. |
What is the biomedical concept corresponding to 'humans'? | [
"human (homo sapiens)",
"homo sapiens (human)"
] | [
"humans (homo)",
"homo (humans)",
"macrobiotus sapiens",
"glossus humanus (cardium humanum)"
] | Given the context 'The evolutionarily conserved heat shock transcription factor Hsf1 plays a central role in thermal adaptation in the major fungal pathogen of humans, Candida albicans.', answer the user's query. |
What is the biomedical concept corresponding to 'candida albicans'? | [
"saccharomyces albicans (candida albicans)",
"monilia albicans (candida albicans)",
"mycotorula albicans (candida albicans)",
"oidium albicans (candida albicans)",
"endomyces albicans (candida albicans)"
] | [
"ozoroa albicans",
"athletes albicans",
"fibroporia albicans",
"cyathopsis albicans (styphelia albicans)"
] | Given the context 'The evolutionarily conserved heat shock transcription factor Hsf1 plays a central role in thermal adaptation in the major fungal pathogen of humans, Candida albicans.', answer the user's query. |
What is the biomedical concept corresponding to 'c. albicans'? | [
"saccharomyces albicans (candida albicans)",
"monilia albicans (candida albicans)",
"mycotorula albicans (candida albicans)",
"oidium albicans (candida albicans)",
"endomyces albicans (candida albicans)"
] | [
"athletes albicans",
"fibroporia albicans",
"candona albicans (pseudocandona albicans)",
"ozoroa albicans"
] | Given the context 'However, the relevance of Hsf1 activation to C. albicans virulence is not clear as this pathogen is thought to be obligately associated with warm blooded animals, and this issue has not been tested because HSF1 is essential for viability in C. albicans.', answer the user's query. |
What is the biomedical concept corresponding to 'c. albicans'? | [
"saccharomyces albicans (candida albicans)",
"monilia albicans (candida albicans)",
"mycotorula albicans (candida albicans)",
"oidium albicans (candida albicans)",
"endomyces albicans (candida albicans)"
] | [
"athletes albicans",
"fibroporia albicans",
"candona albicans (pseudocandona albicans)",
"ozoroa albicans"
] | Given the context 'However, the relevance of Hsf1 activation to C. albicans virulence is not clear as this pathogen is thought to be obligately associated with warm blooded animals, and this issue has not been tested because HSF1 is essential for viability in C. albicans.', answer the user's query. |
What is the biomedical concept corresponding to 'c. albicans'? | [
"saccharomyces albicans (candida albicans)",
"monilia albicans (candida albicans)",
"mycotorula albicans (candida albicans)",
"oidium albicans (candida albicans)",
"endomyces albicans (candida albicans)"
] | [
"athletes albicans",
"fibroporia albicans",
"candona albicans (pseudocandona albicans)",
"ozoroa albicans"
] | Given the context 'In this study, we demonstrate that the HSE regulon is active in C. albicans cells infecting the kidney.', answer the user's query. |
What is the biomedical concept corresponding to 'c. albicans'? | [
"saccharomyces albicans (candida albicans)",
"monilia albicans (candida albicans)",
"mycotorula albicans (candida albicans)",
"oidium albicans (candida albicans)",
"endomyces albicans (candida albicans)"
] | [
"athletes albicans",
"fibroporia albicans",
"candona albicans (pseudocandona albicans)",
"ozoroa albicans"
] | Given the context 'C. albicans HSF1 mutants that lack this CE2 region are viable.', answer the user's query. |
What is the biomedical concept corresponding to 'c. albicans'? | [
"saccharomyces albicans (candida albicans)",
"monilia albicans (candida albicans)",
"mycotorula albicans (candida albicans)",
"oidium albicans (candida albicans)",
"endomyces albicans (candida albicans)"
] | [
"athletes albicans",
"fibroporia albicans",
"candona albicans (pseudocandona albicans)",
"ozoroa albicans"
] | Given the context 'Using this HSF1 CE2 deletion mutant we demonstrate that Hsf1 activation, and hence thermal adaptation, contributes significantly to the virulence of C. albicans.
', answer the user's query. |
What is the biomedical concept corresponding to 'aspergillus fumigatus'? | [
"aspergillus fumigatus fresen., 1863 (aspergillus fumigatus)",
"aspergillus neoellipticus (aspergillus fumigatus)",
"neosartorya fumigata (aspergillus fumigatus)",
"aspergillus fumigatus (aspergillus fumigatus var. ellipticus)",
"sartorya fumigata (aspergillus fumigatus)"
] | [
"aspergillus nidulans (aspergillus nidulans (eidam) g. winter, 1884)",
"aspergillus oryzae (aspergillus oryzae (ahlb.) cohn, 1884)",
"aspergillus nidulellus (aspergillus nidulans)",
"aspergillus aerius"
] | Given the context 'Characterization of the developmental regulator FlbE in Aspergillus fumigatus and Aspergillus nidulans.
', answer the user's query. |
What is the biomedical concept corresponding to 'aspergillus nidulans'? | [
"aspergillus nidulans (aspergillus nidulans (eidam) g. winter, 1884)",
"aspergillus nidulans (eidam) g. winter, 1884 (aspergillus nidulans)",
"aspergillus nidulellus (aspergillus nidulans)",
"emericella nidulans (aspergillus nidulans)"
] | [
"aspergillus neoellipticus (aspergillus fumigatus)",
"aspergillus fumigatus fresen., 1863 (aspergillus fumigatus)",
"aphanothece nidulans",
"aspergillus oryzae (aspergillus oryzae (ahlb.) cohn, 1884)"
] | Given the context 'Characterization of the developmental regulator FlbE in Aspergillus fumigatus and Aspergillus nidulans.
', answer the user's query. |
What is the biomedical concept corresponding to 'aspergillus fumigatus'? | [
"aspergillus fumigatus fresen., 1863 (aspergillus fumigatus)",
"aspergillus neoellipticus (aspergillus fumigatus)",
"neosartorya fumigata (aspergillus fumigatus)",
"aspergillus fumigatus (aspergillus fumigatus var. ellipticus)",
"sartorya fumigata (aspergillus fumigatus)"
] | [
"aspergillus nidulans (aspergillus nidulans (eidam) g. winter, 1884)",
"aspergillus oryzae (aspergillus oryzae (ahlb.) cohn, 1884)",
"aspergillus nidulellus (aspergillus nidulans)",
"aspergillus aerius"
] | Given the context 'In this study, we characterize one of such activators called flbE in Aspergillus fumigatus and Aspergillus nidulans.', answer the user's query. |
What is the biomedical concept corresponding to 'aspergillus nidulans'? | [
"aspergillus nidulans (aspergillus nidulans (eidam) g. winter, 1884)",
"aspergillus nidulans (eidam) g. winter, 1884 (aspergillus nidulans)",
"aspergillus nidulellus (aspergillus nidulans)",
"emericella nidulans (aspergillus nidulans)"
] | [
"aspergillus neoellipticus (aspergillus fumigatus)",
"aspergillus fumigatus fresen., 1863 (aspergillus fumigatus)",
"aphanothece nidulans",
"aspergillus oryzae (aspergillus oryzae (ahlb.) cohn, 1884)"
] | Given the context 'In this study, we characterize one of such activators called flbE in Aspergillus fumigatus and Aspergillus nidulans.', answer the user's query. |
What is the biomedical concept corresponding to 'a. fumigatus'? | [
"aspergillus fumigatus fresen., 1863 (aspergillus fumigatus)",
"aspergillus neoellipticus (aspergillus fumigatus)",
"aspergillus fumigatus (aspergillus fumigatus var. ellipticus)",
"neosartorya fumigata (aspergillus fumigatus)",
"sartorya fumigata (aspergillus fumigatus)"
] | [
"aspergillus nidulans (aspergillus nidulans (eidam) g. winter, 1884)",
"aspergillus oryzae (aspergillus oryzae (ahlb.) cohn, 1884)",
"aspergillus nidulellus (aspergillus nidulans)",
"aspergillus aureus"
] | Given the context 'The predicted FlbE protein is composed of 222 and 201 aa in A. fumigatus and A. nidulans, respectively.', answer the user's query. |
What is the biomedical concept corresponding to 'a. nidulans'? | [
"aspergillus nidulans (aspergillus nidulans (eidam) g. winter, 1884)",
"aspergillus nidulans (eidam) g. winter, 1884 (aspergillus nidulans)",
"emericella nidulans (aspergillus nidulans)",
"aspergillus nidulellus (aspergillus nidulans)",
"sterigmatocystis nidulans (aspergillus nidulans)"
] | [
"aphanothece nidulans",
"aspergillus aureus",
"nassella nidulans",
"aspergillus fumigatus fresen., 1863 (aspergillus fumigatus)"
] | Given the context 'The predicted FlbE protein is composed of 222 and 201 aa in A. fumigatus and A. nidulans, respectively.', answer the user's query. |
What is the biomedical concept corresponding to 'a. nidulans'? | [
"aspergillus nidulans (aspergillus nidulans (eidam) g. winter, 1884)",
"aspergillus nidulans (eidam) g. winter, 1884 (aspergillus nidulans)",
"emericella nidulans (aspergillus nidulans)",
"aspergillus nidulellus (aspergillus nidulans)",
"sterigmatocystis nidulans (aspergillus nidulans)"
] | [
"aphanothece nidulans",
"aspergillus aureus",
"nassella nidulans",
"aspergillus fumigatus fresen., 1863 (aspergillus fumigatus)"
] | Given the context 'While flbE is transiently expressed during early phase of growth in A. nidulans, it is somewhat constitutively expressed during the lifecycle of A. fumigatus.', answer the user's query. |
What is the biomedical concept corresponding to 'a. fumigatus'? | [
"aspergillus fumigatus fresen., 1863 (aspergillus fumigatus)",
"aspergillus neoellipticus (aspergillus fumigatus)",
"aspergillus fumigatus (aspergillus fumigatus var. ellipticus)",
"neosartorya fumigata (aspergillus fumigatus)",
"sartorya fumigata (aspergillus fumigatus)"
] | [
"aspergillus nidulans (aspergillus nidulans (eidam) g. winter, 1884)",
"aspergillus oryzae (aspergillus oryzae (ahlb.) cohn, 1884)",
"aspergillus nidulellus (aspergillus nidulans)",
"aspergillus aureus"
] | Given the context 'While flbE is transiently expressed during early phase of growth in A. nidulans, it is somewhat constitutively expressed during the lifecycle of A. fumigatus.', answer the user's query. |
What is the biomedical concept corresponding to 'a. fumigatus'? | [
"aspergillus fumigatus fresen., 1863 (aspergillus fumigatus)",
"aspergillus neoellipticus (aspergillus fumigatus)",
"aspergillus fumigatus (aspergillus fumigatus var. ellipticus)",
"neosartorya fumigata (aspergillus fumigatus)",
"sartorya fumigata (aspergillus fumigatus)"
] | [
"aspergillus nidulans (aspergillus nidulans (eidam) g. winter, 1884)",
"aspergillus oryzae (aspergillus oryzae (ahlb.) cohn, 1884)",
"aspergillus nidulellus (aspergillus nidulans)",
"aspergillus aureus"
] | Given the context 'Moreover, FlbE is necessary for salt-induced development in liquid submerged culture in A. fumigatus.', answer the user's query. |
What is the biomedical concept corresponding to 'a. nidulans'? | [
"aspergillus nidulans (aspergillus nidulans (eidam) g. winter, 1884)",
"aspergillus nidulans (eidam) g. winter, 1884 (aspergillus nidulans)",
"emericella nidulans (aspergillus nidulans)",
"aspergillus nidulellus (aspergillus nidulans)",
"sterigmatocystis nidulans (aspergillus nidulans)"
] | [
"aphanothece nidulans",
"aspergillus aureus",
"nassella nidulans",
"aspergillus fumigatus fresen., 1863 (aspergillus fumigatus)"
] | Given the context 'The A. nidulans flbE null mutation is fully complemented by A. fumigatus flbE, indicating a functional conservancy of FlbE in Aspergillus.', answer the user's query. |
What is the biomedical concept corresponding to 'a. fumigatus'? | [
"aspergillus fumigatus fresen., 1863 (aspergillus fumigatus)",
"aspergillus neoellipticus (aspergillus fumigatus)",
"aspergillus fumigatus (aspergillus fumigatus var. ellipticus)",
"neosartorya fumigata (aspergillus fumigatus)",
"sartorya fumigata (aspergillus fumigatus)"
] | [
"aspergillus nidulans (aspergillus nidulans (eidam) g. winter, 1884)",
"aspergillus oryzae (aspergillus oryzae (ahlb.) cohn, 1884)",
"aspergillus nidulellus (aspergillus nidulans)",
"aspergillus aureus"
] | Given the context 'The A. nidulans flbE null mutation is fully complemented by A. fumigatus flbE, indicating a functional conservancy of FlbE in Aspergillus.', answer the user's query. |
What is the biomedical concept corresponding to 'a. nidulans'? | [
"aspergillus nidulans (aspergillus nidulans (eidam) g. winter, 1884)",
"aspergillus nidulans (eidam) g. winter, 1884 (aspergillus nidulans)",
"emericella nidulans (aspergillus nidulans)",
"aspergillus nidulellus (aspergillus nidulans)",
"sterigmatocystis nidulans (aspergillus nidulans)"
] | [
"aphanothece nidulans",
"aspergillus aureus",
"nassella nidulans",
"aspergillus fumigatus fresen., 1863 (aspergillus fumigatus)"
] | Given the context 'Both the deletion and overexpression of flbE in A. nidulans result in developmental defects, enhanced autolysis, precocious cell death, and delayed expression of brlA/vosA, suggesting that balanced activity of FlbE is crucial for proper growth and development.', answer the user's query. |
What is the biomedical concept corresponding to 'yeast'? | [
"saccharomyces cerevisiae (saccharomyces cerevisiae (desm.) meyen ex e.c. hansen, 1883)",
"baker's yeast (saccharomyces cerevisiae)",
"saccharomyces cerevisiae (desm.) meyen ex e.c. hansen, 1883 (saccharomyces cerevisiae)",
"mycoderma cerevisiae (saccharomyces cerevisiae)",
"brewer's yeast (saccharomyces ce... | [
"saccharomyces lactis (kluyveromyces lactis)",
"saccharomyces hansenii (debaryomyces hansenii)",
"saccharomyces albicans (candida albicans)",
"saccharomyces globosus (saccharomyces uvarum)"
] | Given the context 'Importantly, the N-terminal portion of FlbE exhibits the trans-activation ability in yeast, whereas the C-terminal half negatively affects its activity.', answer the user's query. |
What is the biomedical concept corresponding to 'a. nidulans'? | [
"aspergillus nidulans (aspergillus nidulans (eidam) g. winter, 1884)",
"aspergillus nidulans (eidam) g. winter, 1884 (aspergillus nidulans)",
"emericella nidulans (aspergillus nidulans)",
"aspergillus nidulellus (aspergillus nidulans)",
"sterigmatocystis nidulans (aspergillus nidulans)"
] | [
"aphanothece nidulans",
"aspergillus aureus",
"nassella nidulans",
"aspergillus fumigatus fresen., 1863 (aspergillus fumigatus)"
] | Given the context 'Finally, overexpression of flbD, but not flbB or flbC, restores conidiation in A. nidulans DeltaflbE, generally supporting the current genetic model for developmental regulation.
', answer the user's query. |
What is the biomedical concept corresponding to 'ploesoma hudsoni'? | [
"ploesoma hudsoni (gastropus hudsoni)",
"gastropus hudsoni (ploesoma hudsoni)"
] | [
"pleioplectron hudsoni",
"knipolegus hudsoni",
"phymatophaea hudsoni",
"pseudoeconesus hudsoni"
] | Given the context 'In addition, the rotifers Asplanchna priodonta, Ploesoma hudsoni and, occasionally, big ciliates (Stentor sp.) all ingested their prey as a whole.
', answer the user's query. |
What is the biomedical concept corresponding to 'colpoda cucullus'? | [
"colpoda cucullus"
] | [
"colpocephalum cucullare",
"cecropis cucullata (hirundo cucullata)",
"paratettix cucullatus",
"hirundo cucullata (cecropis cucullata)"
] | Given the context 'Ca(2+)-dependent in vivo protein phosphorylation and encystment induction in the ciliated protozoan Colpoda cucullus.
', answer the user's query. |
What is the biomedical concept corresponding to 'colpoda cucullus'? | [
"colpoda cucullus"
] | [
"colpocephalum cucullare",
"cecropis cucullata (hirundo cucullata)",
"paratettix cucullatus",
"hirundo cucullata (cecropis cucullata)"
] | Given the context 'Encystment induction of Colpoda cucullus is promoted by an increase in external Ca(2+) and overpopulation of Colpoda vegetative cells.', answer the user's query. |
What is the biomedical concept corresponding to 'aspergillus nidulans'? | [
"aspergillus nidulans (aspergillus nidulans (eidam) g. winter, 1884)",
"aspergillus nidulans (eidam) g. winter, 1884 (aspergillus nidulans)",
"aspergillus nidulellus (aspergillus nidulans)",
"emericella nidulans (aspergillus nidulans)"
] | [
"aspergillus neoellipticus (aspergillus fumigatus)",
"aspergillus fumigatus fresen., 1863 (aspergillus fumigatus)",
"aphanothece nidulans",
"aspergillus oryzae (aspergillus oryzae (ahlb.) cohn, 1884)"
] | Given the context 'Completing the purine utilisation pathway of Aspergillus nidulans.
', answer the user's query. |
What is the biomedical concept corresponding to 'aspergillus nidulans'? | [
"aspergillus nidulans (aspergillus nidulans (eidam) g. winter, 1884)",
"aspergillus nidulans (eidam) g. winter, 1884 (aspergillus nidulans)",
"aspergillus nidulellus (aspergillus nidulans)",
"emericella nidulans (aspergillus nidulans)"
] | [
"aspergillus neoellipticus (aspergillus fumigatus)",
"aspergillus fumigatus fresen., 1863 (aspergillus fumigatus)",
"aphanothece nidulans",
"aspergillus oryzae (aspergillus oryzae (ahlb.) cohn, 1884)"
] | Given the context 'We have previously identified by classical genetics and biochemistry, all the genes of Aspergillus nidulans predicted to be involved in purine utilisation, together with cognate regulatory genes and one gene encoding a novel xanthine hydroxylation activity.', answer the user's query. |
What is the biomedical concept corresponding to 'a. nidulans'? | [
"aspergillus nidulans (aspergillus nidulans (eidam) g. winter, 1884)",
"aspergillus nidulans (eidam) g. winter, 1884 (aspergillus nidulans)",
"emericella nidulans (aspergillus nidulans)",
"aspergillus nidulellus (aspergillus nidulans)",
"sterigmatocystis nidulans (aspergillus nidulans)"
] | [
"aphanothece nidulans",
"aspergillus aureus",
"nassella nidulans",
"aspergillus fumigatus fresen., 1863 (aspergillus fumigatus)"
] | Given the context 'The identification of these additional genes confirms the complete absence of clustering of the genes involved in purine utilisation in A. nidulans.
', answer the user's query. |
What is the biomedical concept corresponding to 'great tit'? | [
"great tit (parus major)",
"parus major (great tit)"
] | [
"grey tit (melaniparus afer)",
"titiotus",
"dark-grey tit (periparus rufonuchalis)",
"tityus"
] | Given the context 'Scale and state dependence of the relationship between personality and dispersal in a great tit population.
', answer the user's query. |
What is the biomedical concept corresponding to 'great tit'? | [
"great tit (parus major)",
"parus major (great tit)"
] | [
"grey tit (melaniparus afer)",
"titiotus",
"dark-grey tit (periparus rufonuchalis)",
"tityus"
] | Given the context 'Here, we examine the relationship between exploration behaviour - an axis of personality that appears to be important in animals generally - and a variety of dispersal processes over 6 years in a population of the great tit Parus major.', answer the user's query. |
What is the biomedical concept corresponding to 'parus major'? | [
"parus major (great tit)",
"great tit (parus major)"
] | [
"parus major major",
"parus major minor (parus minor)",
"parus minor (parus major minor)",
"polygraphus major"
] | Given the context 'Here, we examine the relationship between exploration behaviour - an axis of personality that appears to be important in animals generally - and a variety of dispersal processes over 6 years in a population of the great tit Parus major.', answer the user's query. |
What is the biomedical concept corresponding to 'tetrahymena thermophila'? | [
"tetrahymena thermophila"
] | [
"tetrahymena thermophila ii",
"planetella thermophila",
"tepidiforma thermophila",
"myceliophthora thermophila (thermothelomyces thermophilus)"
] | Given the context 'Inactivation of a macronuclear intra-S-phase checkpoint in Tetrahymena thermophila with caffeine affects the integrity of the micronuclear genome.
', answer the user's query. |
What is the biomedical concept corresponding to 'tetrahymena thermophila'? | [
"tetrahymena thermophila"
] | [
"tetrahymena thermophila ii",
"planetella thermophila",
"tepidiforma thermophila",
"myceliophthora thermophila (thermothelomyces thermophilus)"
] | Given the context 'Aphidicolin (APH), an inhibitor of DNA polymerase alpha, arrested cell divisions in Tetrahymena thermophila.', answer the user's query. |
What is the biomedical concept corresponding to 'human'? | [
"human (homo sapiens)",
"homo sapiens (human)"
] | [
"humans (homo)",
"homo (humans)",
"macrobiotus sapiens",
"glossus humanus (cardium humanum)"
] | Given the context 'Importantly, however, these relationships were modified by the degree of urbanization and species' abilities to persist in human-modified landscapes.', answer the user's query. |
What is the biomedical concept corresponding to 'paramecium pentaurelia'? | [
"paramecium pentaurelia (paramecium aurelia syngen 5)",
"paramecium aurelia syngen 5 (paramecium pentaurelia)"
] | [
"paramecium triaurelia",
"paramecium primaurelia",
"paramecium septaurelia",
"paramecium decaurelia"
] | Given the context 'Polymorphism of Paramecium pentaurelia (Ciliophora, Oligohymenophorea) strains revealed by rDNA and mtDNA sequences.
Paramecium pentaurelia is one of 15 known sibling species of the Paramecium aurelia complex.', answer the user's query. |
What is the biomedical concept corresponding to 'paramecium pentaurelia'? | [
"paramecium pentaurelia (paramecium aurelia syngen 5)",
"paramecium aurelia syngen 5 (paramecium pentaurelia)"
] | [
"paramecium triaurelia",
"paramecium primaurelia",
"paramecium septaurelia",
"paramecium decaurelia"
] | Given the context 'Polymorphism of Paramecium pentaurelia (Ciliophora, Oligohymenophorea) strains revealed by rDNA and mtDNA sequences.
Paramecium pentaurelia is one of 15 known sibling species of the Paramecium aurelia complex.', answer the user's query. |
What is the biomedical concept corresponding to 'p. pentaurelia'? | [
"paramecium pentaurelia (paramecium aurelia syngen 5)"
] | [
"paramecium triaurelia",
"paramecium decaurelia",
"paramecium primaurelia",
"paramecium biaurelia"
] | Given the context 'This study aimed at assessing genetic polymorphism within P. pentaurelia including new strains recently found in Poland (originating from two water bodies, different years, seasons, and clones of one strain) as well as strains collected from distant habitats (USA, Europe, Asia), and strains representing other species of the complex.', answer the user's query. |
What is the biomedical concept corresponding to 'yeast'? | [
"saccharomyces cerevisiae (saccharomyces cerevisiae (desm.) meyen ex e.c. hansen, 1883)",
"baker's yeast (saccharomyces cerevisiae)",
"saccharomyces cerevisiae (desm.) meyen ex e.c. hansen, 1883 (saccharomyces cerevisiae)",
"mycoderma cerevisiae (saccharomyces cerevisiae)",
"brewer's yeast (saccharomyces ce... | [
"saccharomyces lactis (kluyveromyces lactis)",
"saccharomyces hansenii (debaryomyces hansenii)",
"saccharomyces albicans (candida albicans)",
"saccharomyces globosus (saccharomyces uvarum)"
] | Given the context 'Proposal of Mingxiaea gen. nov. for the anamorphic basidiomycetous yeast species in the Bulleribasidium clade (Tremellales) based on molecular phylogenetic analysis, with six new combinations and four novel species.
', answer the user's query. |
What is the biomedical concept corresponding to 'yeast'? | [
"saccharomyces cerevisiae (saccharomyces cerevisiae (desm.) meyen ex e.c. hansen, 1883)",
"baker's yeast (saccharomyces cerevisiae)",
"saccharomyces cerevisiae (desm.) meyen ex e.c. hansen, 1883 (saccharomyces cerevisiae)",
"mycoderma cerevisiae (saccharomyces cerevisiae)",
"brewer's yeast (saccharomyces ce... | [
"saccharomyces lactis (kluyveromyces lactis)",
"saccharomyces hansenii (debaryomyces hansenii)",
"saccharomyces albicans (candida albicans)",
"saccharomyces globosus (saccharomyces uvarum)"
] | Given the context 'The distinction and monophyletic property of the basidiomycetous yeast species in the Bulleribasidium clade of the order Tremellales was resolved by molecular phylogenetic analysis based on the combined sequences of the 18S rRNA gene, internal transcribed spacer (ITS) region including 5.8S rRNA gene and 26S rRNA gene D1/D2 domain.', answer the user's query. |
What is the biomedical concept corresponding to 'yeasts'? | [
"saccharomyces cerevisiae (saccharomyces cerevisiae (desm.) meyen ex e.c. hansen, 1883)",
"saccharomyces cerevisiae (desm.) meyen ex e.c. hansen, 1883 (saccharomyces cerevisiae)",
"mycoderma cerevisiae (saccharomyces cerevisiae)",
"baker's yeast (saccharomyces cerevisiae)",
"saccharomyces italicus (saccharo... | [
"true yeasts (saccharomycotina)",
"saccharomyces albicans (candida albicans)",
"saccharomyces lactis (kluyveromyces lactis)",
"cryptomyces"
] | Given the context 'The addition to the clade of new anamorphic species identified among ballistoconidium-forming yeasts isolated from China confirmed and strengthened the separation of this clade from other clades or lineages in the order Tremellales.', answer the user's query. |
What is the biomedical concept corresponding to 'yeast'? | [
"saccharomyces cerevisiae (saccharomyces cerevisiae (desm.) meyen ex e.c. hansen, 1883)",
"baker's yeast (saccharomyces cerevisiae)",
"saccharomyces cerevisiae (desm.) meyen ex e.c. hansen, 1883 (saccharomyces cerevisiae)",
"mycoderma cerevisiae (saccharomyces cerevisiae)",
"brewer's yeast (saccharomyces ce... | [
"saccharomyces lactis (kluyveromyces lactis)",
"saccharomyces hansenii (debaryomyces hansenii)",
"saccharomyces albicans (candida albicans)",
"saccharomyces globosus (saccharomyces uvarum)"
] | Given the context 'Four novel species in the new genus were identified among 16 ballistoconidium-forming yeast strains isolated from plant leaves collected in Hainan province, southern China, by D1/D2 and ITS sequence analyses.', answer the user's query. |
What is the biomedical concept corresponding to 'porcine circovirus type 2'? | [
"porcine circovirus type 2 (porcine circovirus 2)",
"porcine circovirus type ii (porcine circovirus 2)",
"porcine circovirus-2 (porcine circovirus 2)",
"porcine circovirus 2 (pcv2 (porcine circovirus 2))",
"pcv2 (porcine circovirus 2) (porcine circovirus 2)"
] | [
"porcine circovirus type 2b (porcine circovirus type 2-b)",
"porcine circovirus type 2-b (porcine circovirus type 2b)",
"circovirus porcine2",
"porcine circovirus type 2-c"
] | Given the context 'Development of a blocking ELISA for detection of serum neutralizing antibodies against porcine circovirus type 2.
', answer the user's query. |
What is the biomedical concept corresponding to 'porcine circovirus type 2 (pcv2)'? | [
"porcine circovirus 2 (pcv2 (porcine circovirus 2))",
"pcv2 (porcine circovirus 2) (porcine circovirus 2)",
"porcine circovirus type 2 (porcine circovirus 2)",
"porcine circovirus-2 (porcine circovirus 2)",
"porcine circovirus type ii (porcine circovirus 2)"
] | [
"porcine circovirus type 2b (porcine circovirus type 2-b)",
"porcine circovirus (pcv (porcine circovirus))",
"porcine circovirus type 2-b (porcine circovirus type 2b)",
"pcv (porcine circovirus) (porcine circovirus)"
] | Given the context 'A monoclonal antibody (Mab)-based blocking ELISA was developed for the detection of serum neutralizing antibodies to porcine circovirus type 2 (PCV2).', answer the user's query. |
What is the biomedical concept corresponding to 'pig'? | [
"pig (sus scrofa) (sus scrofa)",
"pigs (sus scrofa) (sus scrofa)",
"swine (sus scrofa)",
"sus scrofa (pigs (sus scrofa))"
] | [
"domestic pig (sus scrofa domesticus)",
"sus domestica (sus scrofa domesticus)",
"sus domesticus (sus scrofa domesticus)",
"sus scrofa domesticus (sus scrofa domestica)"
] | Given the context 'The assay was verified by testing experimental and commercial pig sera.', answer the user's query. |
What is the biomedical concept corresponding to 'pigs'? | [
"swine (sus scrofa)",
"pigs (sus scrofa) (sus scrofa)",
"pig (sus scrofa) (sus scrofa)",
"sus scrofa (pigs (sus scrofa))",
"wild boar (sus scrofa)"
] | [
"domestic pig (sus scrofa domesticus)",
"sus domestica (sus scrofa domesticus)",
"sus domesticus (sus scrofa domesticus)",
"pigs (suidae) (suidae)"
] | Given the context 'The serum neutralizing antibody profile showed a decrease from the age of 4 to 13 weeks, and seroconversion after 13 weeks in pigs from a commercial pig farm.', answer the user's query. |
What is the biomedical concept corresponding to 'pig'? | [
"pig (sus scrofa) (sus scrofa)",
"pigs (sus scrofa) (sus scrofa)",
"swine (sus scrofa)",
"sus scrofa (pigs (sus scrofa))"
] | [
"domestic pig (sus scrofa domesticus)",
"sus domestica (sus scrofa domesticus)",
"sus domesticus (sus scrofa domesticus)",
"sus scrofa domesticus (sus scrofa domestica)"
] | Given the context 'The serum neutralizing antibody profile showed a decrease from the age of 4 to 13 weeks, and seroconversion after 13 weeks in pigs from a commercial pig farm.', answer the user's query. |
What is the biomedical concept corresponding to 'pig'? | [
"pig (sus scrofa) (sus scrofa)",
"pigs (sus scrofa) (sus scrofa)",
"swine (sus scrofa)",
"sus scrofa (pigs (sus scrofa))"
] | [
"domestic pig (sus scrofa domesticus)",
"sus domestica (sus scrofa domesticus)",
"sus domesticus (sus scrofa domesticus)",
"sus scrofa domesticus (sus scrofa domestica)"
] | Given the context 'Additionally, the positive detection rate in 703 sera collected from nine commercial pig farms was 73%.', answer the user's query. |
What is the biomedical concept corresponding to 'aspergillus niger'? | [
"aspergillus niger (aspergillus lacticoffeatus frisvad & samson, 2004)",
"aspergillus lacticoffeatus (aspergillus niger)"
] | [
"aspergillus oryzae (aspergillus oryzae (ahlb.) cohn, 1884)",
"aspergillus neoellipticus (aspergillus fumigatus)",
"amauroascus niger",
"aspergillus nidulellus (aspergillus nidulans)"
] | Given the context 'The molecular and genetic basis of conidial pigmentation in Aspergillus niger.
', answer the user's query. |
What is the biomedical concept corresponding to 'aspergillus niger'? | [
"aspergillus niger (aspergillus lacticoffeatus frisvad & samson, 2004)",
"aspergillus lacticoffeatus (aspergillus niger)"
] | [
"aspergillus oryzae (aspergillus oryzae (ahlb.) cohn, 1884)",
"aspergillus neoellipticus (aspergillus fumigatus)",
"amauroascus niger",
"aspergillus nidulellus (aspergillus nidulans)"
] | Given the context 'A characteristic hallmark of Aspergillus niger is the formation of black conidiospores.', answer the user's query. |
What is the biomedical concept corresponding to 'a. niger'? | [
"aspergillus niger (aspergillus lacticoffeatus frisvad & samson, 2004)"
] | [
"anidarnes niger",
"amauroascus niger",
"aparallactus niger",
"oxyporus niger"
] | Given the context 'We have identified four loci involved in spore pigmentation of A. niger by using a combined genomic and classical complementation approach.', answer the user's query. |
What is the biomedical concept corresponding to 'a. fumigatus'? | [
"aspergillus fumigatus fresen., 1863 (aspergillus fumigatus)",
"aspergillus neoellipticus (aspergillus fumigatus)",
"aspergillus fumigatus (aspergillus fumigatus var. ellipticus)",
"neosartorya fumigata (aspergillus fumigatus)",
"sartorya fumigata (aspergillus fumigatus)"
] | [
"aspergillus nidulans (aspergillus nidulans (eidam) g. winter, 1884)",
"aspergillus oryzae (aspergillus oryzae (ahlb.) cohn, 1884)",
"aspergillus nidulellus (aspergillus nidulans)",
"aspergillus aureus"
] | Given the context 'The fawn phenotype was complemented by a PKS protein (FwnA, An09g05730), the ovlA mutant by An14g05350 (OlvA) and the brnA mutant by An14g05370 (BrnA), the respective homologs of alb1/pksP, ayg1 and abr1 in A. fumigatus.', answer the user's query. |
What is the biomedical concept corresponding to 'a. niger'? | [
"aspergillus niger (aspergillus lacticoffeatus frisvad & samson, 2004)"
] | [
"anidarnes niger",
"amauroascus niger",
"aparallactus niger",
"oxyporus niger"
] | Given the context 'Thus, secondary metabolite profiling of the color mutants revealed a close relationship between polyketide synthesis and conidial pigmentation in A. niger.
', answer the user's query. |
What is the biomedical concept corresponding to 'merodon equestris'? | [
"merodon equestris"
] | [
"merodon eques",
"merodon aurifer (merodon avidus)",
"merodon avidus (merodon aurifer)",
"mormyrus ovis"
] | Given the context 'These include hytrosaviruses detected in various tsetse fly species (Glossina spp.), the narcissus bulb fly Merodon equestris and the house fly Musca domestica.', answer the user's query. |
What is the biomedical concept corresponding to 'house fly'? | [
"house fly (musca domestica)",
"musca domestica (house fly)"
] | [
"house flies (muscidae)",
"lesser house fly (fannia canicularis)",
"horse fly (tabanus atratus)",
"autumn house fly (musca autumnalis)"
] | Given the context 'These include hytrosaviruses detected in various tsetse fly species (Glossina spp.), the narcissus bulb fly Merodon equestris and the house fly Musca domestica.', answer the user's query. |
What is the biomedical concept corresponding to 'musca domestica'? | [
"musca domestica (house fly)",
"house fly (musca domestica)"
] | [
"musca vicina (musca domestica vicina)",
"musca domestica vicina (musca vicina)",
"musca autumnalis (autumn house fly)",
"musca oleae (bactrocera oleae)"
] | Given the context 'These include hytrosaviruses detected in various tsetse fly species (Glossina spp.), the narcissus bulb fly Merodon equestris and the house fly Musca domestica.', answer the user's query. |
What is the biomedical concept corresponding to 'glossinia pallidipes'? | [
"glossina pallidipes (tsetse fly)",
"tsetse fly (glossina pallidipes)"
] | [
"glyphonyx pallidipes",
"glossina fuscipes (tsetse fly)",
"glossina pallicera (tsetse fly)",
"glossina caliginea (tsetse fly)"
] | Given the context 'Based on the complete genome sequence of Glossinia pallidipes (GpSGHV) and Musca domestica (MdSGHV) salivary gland hypertrophy viruses, a PCR based methodology was developed to detect the viruses in these species.', answer the user's query. |
What is the biomedical concept corresponding to 'musca domestica'? | [
"musca domestica (house fly)",
"house fly (musca domestica)"
] | [
"musca vicina (musca domestica vicina)",
"musca domestica vicina (musca vicina)",
"musca autumnalis (autumn house fly)",
"musca oleae (bactrocera oleae)"
] | Given the context 'Based on the complete genome sequence of Glossinia pallidipes (GpSGHV) and Musca domestica (MdSGHV) salivary gland hypertrophy viruses, a PCR based methodology was developed to detect the viruses in these species.', answer the user's query. |
What is the biomedical concept corresponding to 'plasmodiophora brassicae'? | [
"plasmodiophora brassicae"
] | [
"phytophthora brassicae",
"pestalotia brassicae (pestalotiopsis brassicae)",
"pestalotiopsis brassicae (pestalotia brassicae)",
"pyrenopeziza brassicae"
] | Given the context 'Complete sructure of nuclear rDNA of the obligate plant parasite Plasmodiophora brassicae: intraspecific polymorphisms in the exon and group', answer the user's query. |
What is the biomedical concept corresponding to 'plasmodiophora brassicae'? | [
"plasmodiophora brassicae"
] | [
"phytophthora brassicae",
"pestalotia brassicae (pestalotiopsis brassicae)",
"pestalotiopsis brassicae (pestalotia brassicae)",
"pyrenopeziza brassicae"
] | Given the context 'I intron of the large subunit rDNA.
Plasmodiophora brassicae is a soil-borne obligate intracellular parasite in the phylum Cercozoa of the Rhizaria that causes clubroot disease of crucifer crops.', answer the user's query. |
What is the biomedical concept corresponding to 'p. brassicae'? | [
"plasmodiophora brassicae"
] | [
"phytophthora brassicae",
"pseudomonas brassicae",
"pestalotiopsis brassicae (pestalotia brassicae)",
"pyrenopeziza brassicae"
] | Given the context 'In this study, the nuclear ribosomal RNA gene (rDNA) repeat unit of P. brassicae was determined, with particular emphasis on the structure of large subunit (LSU) rDNA, in which polymorphic regions were expected to be present.', answer the user's query. |
What is the biomedical concept corresponding to 'gymnodinium myriopyrenoides'? | [
"gymnodinium myriopyrenoides (nusuttodinium myriopyrenoides)"
] | [
"gymnogramma myriophylla (tryonia myriophylla)",
"gymnostoma vitiense",
"gymnodinium varians",
"gymnodinium litoralis"
] | Given the context 'Taxonomy and phylogeny of a new kleptoplastidal dinoflagellate, Gymnodinium myriopyrenoides sp.', answer the user's query. |
What is the biomedical concept corresponding to 'gymnodinium myriopyrenoides'? | [
"gymnodinium myriopyrenoides (nusuttodinium myriopyrenoides)"
] | [
"gymnogramma myriophylla (tryonia myriophylla)",
"gymnostoma vitiense",
"gymnodinium varians",
"gymnodinium litoralis"
] | Given the context 'A new kleptoplastidal dinoflagellate, Gymnodinium myriopyrenoides sp.', answer the user's query. |
What is the biomedical concept corresponding to 'g. myriopyrenoides'? | [
"gymnodinium myriopyrenoides (nusuttodinium myriopyrenoides)"
] | [
"magnaporthales",
"geometer moths (geometridae)",
"gigaspermales",
"trogoderma anthrenoides"
] | Given the context 'Phylogenetic analysis based on LSU rDNA showed that the sequence of G. myriopyrenoides was included in the Gymnodiniales sensu stricto clade and had special affinities with the species Amphidinium poecilochroum and Gymnodinium acidotum, which also harbor kleptochloroplasts.', answer the user's query. |
What is the biomedical concept corresponding to 'amphidinium poecilochroum'? | [
"amphidinium poecilochroum (nusuttodinium poecilochroum)",
"nusuttodinium poecilochroum (amphidinium poecilochroum)"
] | [
"acremonium parvum (waltergamsia parva)",
"amphiura poecila",
"moupinia poecilotis (chrysomma poecilotis)",
"ambulyx poecilus (callambulyx poecilus)"
] | Given the context 'Phylogenetic analysis based on LSU rDNA showed that the sequence of G. myriopyrenoides was included in the Gymnodiniales sensu stricto clade and had special affinities with the species Amphidinium poecilochroum and Gymnodinium acidotum, which also harbor kleptochloroplasts.', answer the user's query. |
What is the biomedical concept corresponding to 'gymnodinium acidotum'? | [
"gymnodinium acidotum (nusuttodinium acidotum)",
"nusuttodinium acidotum (gymnodinium acidotum)"
] | [
"gymnetron tetrum",
"gymnosporangium atlanticum",
"gymnodinium gracile",
"gymnodinium heterostriatum"
] | Given the context 'Phylogenetic analysis based on LSU rDNA showed that the sequence of G. myriopyrenoides was included in the Gymnodiniales sensu stricto clade and had special affinities with the species Amphidinium poecilochroum and Gymnodinium acidotum, which also harbor kleptochloroplasts.', answer the user's query. |
What is the biomedical concept corresponding to 'g. myriopyrenoides'? | [
"gymnodinium myriopyrenoides (nusuttodinium myriopyrenoides)"
] | [
"magnaporthales",
"geometer moths (geometridae)",
"gigaspermales",
"trogoderma anthrenoides"
] | Given the context 'Phylogenetic analysis based on plastid-encoded SSU rDNA and ultrastructural observations suggested that the symbionts of G. myriopyrenoides were cryptophytes of the genus Chroomonas or Hemiselmis.', answer the user's query. |
What is the biomedical concept corresponding to 'g. myriopyrenoides'? | [
"gymnodinium myriopyrenoides (nusuttodinium myriopyrenoides)"
] | [
"magnaporthales",
"geometer moths (geometridae)",
"gigaspermales",
"trogoderma anthrenoides"
] | Given the context 'The symbiotic level of G. myriopyrenoides was estimated to be a relatively early stage in the unarmored kleptoplastidal dinoflagellates.
', answer the user's query. |
What is the biomedical concept corresponding to 'aspergillus oryzae'? | [
"aspergillus oryzae (aspergillus oryzae (ahlb.) cohn, 1884)",
"aspergillus oryzae (ahlb.) cohn, 1884 (aspergillus oryzae)",
"eurotium oryzae (aspergillus oryzae)",
"aspergillus flavus var. oryzae (aspergillus oryzae)"
] | [
"nigrospora oryzae (monotospora oryzae)",
"monotospora oryzae (nigrospora oryzae)",
"amorphomonas oryzae ('amorphomonas oryzae')",
"sclerotium oryzae (nakataea oryzae)"
] | Given the context 'Identification and characterization of genes responsible for biosynthesis of kojic acid, an industrially important compound from Aspergillus oryzae.
', answer the user's query. |
What is the biomedical concept corresponding to 'aspergillus oryzae'? | [
"aspergillus oryzae (aspergillus oryzae (ahlb.) cohn, 1884)",
"aspergillus oryzae (ahlb.) cohn, 1884 (aspergillus oryzae)",
"eurotium oryzae (aspergillus oryzae)",
"aspergillus flavus var. oryzae (aspergillus oryzae)"
] | [
"nigrospora oryzae (monotospora oryzae)",
"monotospora oryzae (nigrospora oryzae)",
"amorphomonas oryzae ('amorphomonas oryzae')",
"sclerotium oryzae (nakataea oryzae)"
] | Given the context 'Kojic acid is produced in large amounts by Aspergillus oryzae as a secondary metabolite and is widely used in the cosmetic industry.', answer the user's query. |
What is the biomedical concept corresponding to 'respiratory syncytial virus'? | [
"rsv (respiratory syncytial virus) (respiratory syncytial virus)",
"respiratory syncytial virus rsv (respiratory syncytial virus)",
"respiratory syncytial virus (respiratory syncytial virus rs virus)",
"respiratory syncytial virus rs virus (respiratory syncytial virus)",
"respiratory syncytial virus rs (res... | [
"hrsv (human respiratory syncytial virus) (human respiratory syncytial virus)",
"human respiratory syncytial virus (hrsv (human respiratory syncytial virus))",
"human rsv (human respiratory syncytial virus)",
"human orthopneumovirus (human respiratory syncytial virus)"
] | Given the context 'In children, respiratory syncytial virus, rhinovirus, human metapneumovirus, human bocavirus, and parainfluenza viruses are the agents identified most frequently in both developed and developing countries.', answer the user's query. |
What is the biomedical concept corresponding to 'human metapneumovirus'? | [
"human metapneumovirus (hmpv (human metapneumovirus))",
"hmpv (human metapneumovirus) (human metapneumovirus)"
] | [
"metapneumovirus",
"human metapneumovirus a",
"human metapneumovirus b",
"metapneumovirus hominis"
] | Given the context 'In children, respiratory syncytial virus, rhinovirus, human metapneumovirus, human bocavirus, and parainfluenza viruses are the agents identified most frequently in both developed and developing countries.', answer the user's query. |
What is the biomedical concept corresponding to 'human bocavirus'? | [
"human bocavirus"
] | [
"human bocavirus 1 (human bocavirus type 1)",
"rodent bocavirus",
"human bocavirus type 1 (human bocavirus 1)",
"swine bocavirus"
] | Given the context 'In children, respiratory syncytial virus, rhinovirus, human metapneumovirus, human bocavirus, and parainfluenza viruses are the agents identified most frequently in both developed and developing countries.', answer the user's query. |
What is the biomedical concept corresponding to 'escherichia coli'? | [
"bacterium coli (escherichia coli)",
"e. coli (escherichia coli)",
"bacillus coli (escherichia coli)",
"enterococcus coli (escherichia coli)",
"bacterium coli commune (escherichia coli)"
] | [
"escherichia",
"escherichia faecalis ('escherichia faecalis')",
"'escherichia faecalis' (escherichia faecalis)",
"escherichia coli c"
] | Given the context 'Unexpected coregulator range for the global regulator Lrp of Escherichia coli and Proteus mirabilis.
', answer the user's query. |
What is the biomedical concept corresponding to 'proteus mirabilis'? | [
"proteus mirabilis"
] | [
"proteus vulgaris",
"common proteus (proteus anguinus)",
"proteus mirabilis 1014",
"proteus mirabilis bb2000"
] | Given the context 'Unexpected coregulator range for the global regulator Lrp of Escherichia coli and Proteus mirabilis.
', answer the user's query. |
What is the biomedical concept corresponding to 'escherichia coli'? | [
"bacterium coli (escherichia coli)",
"e. coli (escherichia coli)",
"bacillus coli (escherichia coli)",
"enterococcus coli (escherichia coli)",
"bacterium coli commune (escherichia coli)"
] | [
"escherichia",
"escherichia faecalis ('escherichia faecalis')",
"'escherichia faecalis' (escherichia faecalis)",
"escherichia coli c"
] | Given the context 'In Escherichia coli, Lrp regulates over 200 genes directly and is well known to respond to leucine and, to a somewhat lesser extent, alanine.', answer the user's query. |
What is the biomedical concept corresponding to 'proteus mirabilis'? | [
"proteus mirabilis"
] | [
"proteus vulgaris",
"common proteus (proteus anguinus)",
"proteus mirabilis 1014",
"proteus mirabilis bb2000"
] | Given the context 'We focused on Lrp from Proteus mirabilis and E. coli, orthologs with 98% identity overall and identical helix-turn-helix motifs, for which a previous study nevertheless found functional differences.', answer the user's query. |
What is the biomedical concept corresponding to 'e. coli'? | [
"e. coli (escherichia coli)",
"bacterium coli (escherichia coli)",
"bacillus coli (escherichia coli)",
"enterococcus coli (escherichia coli)",
"bacterium coli commune (escherichia coli)"
] | [
"escherichia",
"escherichia faecalis ('escherichia faecalis')",
"entamoeba coli",
"'escherichia faecalis' (escherichia faecalis)"
] | Given the context 'We focused on Lrp from Proteus mirabilis and E. coli, orthologs with 98% identity overall and identical helix-turn-helix motifs, for which a previous study nevertheless found functional differences.', answer the user's query. |
What is the biomedical concept corresponding to 'e. coli'? | [
"e. coli (escherichia coli)",
"bacterium coli (escherichia coli)",
"bacillus coli (escherichia coli)",
"enterococcus coli (escherichia coli)",
"bacterium coli commune (escherichia coli)"
] | [
"escherichia",
"escherichia faecalis ('escherichia faecalis')",
"entamoeba coli",
"'escherichia faecalis' (escherichia faecalis)"
] | Given the context 'In the course of this investigation, we found, via in vivo reporter fusion assays and in vitro electrophoretic mobility shift experiments, that E. coli Lrp itself responded to a broader range of amino acids than was previously appreciated.', answer the user's query. |
What is the biomedical concept corresponding to 'e. coli'? | [
"e. coli (escherichia coli)",
"bacterium coli (escherichia coli)",
"bacillus coli (escherichia coli)",
"enterococcus coli (escherichia coli)",
"bacterium coli commune (escherichia coli)"
] | [
"escherichia",
"escherichia faecalis ('escherichia faecalis')",
"entamoeba coli",
"'escherichia faecalis' (escherichia faecalis)"
] | Given the context 'In particular, for both the E. coli and P. mirabilis orthologs, Lrp responsiveness to methionine was similar in magnitude to that to leucine.', answer the user's query. |
What is the biomedical concept corresponding to 'p. mirabilis'? | [
"proteus mirabilis"
] | [
"pyura mirabilis",
"prohamitermes mirabilis",
"porina mirabilis",
"partula mirabilis"
] | Given the context 'In particular, for both the E. coli and P. mirabilis orthologs, Lrp responsiveness to methionine was similar in magnitude to that to leucine.', answer the user's query. |
What is the biomedical concept corresponding to 'ammophila arenaria'? | [
"ammophila arenaria (calamagrostis arenaria)",
"calamagrostis arenaria (ammophila arenaria)"
] | [
"ammannia arenaria",
"thelymitra arenaria",
"amphisbaena arenaria",
"microscilla arenaria (flammeovirga arenaria)"
] | Given the context '2. We investigated the covariation among naturally colonising above- and belowground invertebrate species across six genetically distinct populations of the dune grass Ammophila arenaria.', answer the user's query. |
What is the biomedical concept corresponding to 'a. arenaria'? | [
"ammophila arenaria (calamagrostis arenaria)"
] | [
"artemisia arenaria",
"aspalathus arenaria",
"allagoptera arenaria",
"ammannia arenaria"
] | Given the context 'The observed strong covariation suggests diffuse coevolution between A. arenaria and its associated invertebrate species.', answer the user's query. |
What is the biomedical concept corresponding to 'metallosphaera sedula'? | [
"metallosphaera sedula"
] | [
"prototrachia sedula",
"micronecta sedula",
"protopolybia sedula",
"pleionea sediminis"
] | Given the context 'Labeling and enzyme studies of the central carbon metabolism in Metallosphaera sedula.
Metallosphaera sedula (Sulfolobales, Crenarchaeota) uses the 3-hydroxypropionate/4-hydroxybutyrate cycle for autotrophic carbon fixation.', answer the user's query. |
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