instruction stringlengths 209 946 | input stringlengths 96 1.45k | response stringlengths 3 12 |
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<Instruct>: Given the context 'Due to the high variability of sequences for some members of this family, different melting temperatures were also observed between different isolates of the species CYDV-RPV and TuYV.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [cydv-rpv; tuyv]
<Options>: A: kayvirus
B: tupanvirus
C: cpdnv (aka culex pipiens densovirus)
D: potyvirus
E: tupaia rhabdovirus (aka tupaia virus)
F: cydv-rpv (aka cereal yellow dwarf virus rpv)
G: triplejayvirus
H: chrocadard virus
I: chrocanurd virus
J: chrocacyrn virus
K: None of the above. | [F; K] |
<Instruct>: Given the context 'Due to the high variability of sequences for some members of this family, different melting temperatures were also observed between different isolates of the species CYDV-RPV and TuYV.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [cydv-rpv; tuyv]
<Options>: A: cydv-rpv (aka cereal yellow dwarf virus rpv)
B: tupaia virus (tupaia rhabdovirus) (aka tupaia virus)
C: cygnet river virus
D: cabyv (aka cucurbit aphid-borne yellows virus)
E: kayvirus
F: chrocagyrd virus
G: chrocavyrb virus
H: chrociverd virus
I: potyvirus yituberosi
J: potyvirus
K: None of the above. | [A; K] |
<Instruct>: Given the context 'Nevertheless, discrimination between species was achieved for SbDV, BLRV, BChV, BMYV, CABYV and either PLRV or BWYV.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [sbdv; blrv; bchv; bmyv]
<Options>: A: blrv (aka bean leafroll virus) (aka bean leafroll virus)
B: sugar beet yellows virus, sbyv (aka beet yellows virus)
C: mboke virus
D: bovine respiratory syncytial virus
E: bovine rhinitis b virus 1
F: bovine papular stomatitis virus
G: bhv-4 (aka bovine gammaherpesvirus 4)
H: bruthen virus
I: domestic cat hepatitis b virus
J: bk virus mm (aka bk polyomavirus mm)
K: benyvirus
L: brome mosaic virus (bmv (aka brome mosaic virus))
M: bruconha virus (broconha virus) (aka bruconha virus)
N: bovine syncytial virus (aka bovine foamy virus)
O: bmyv (aka beet mild yellowing virus) (aka beet mild yellowing virus)
P: blunervirus
Q: south bay virus
R: butlers creek virus
S: bovine rhinotracheitis virus (aka bovine alphaherpesvirus 1)
T: bovine circovirus
U: None of the above. | [U; A; U; O] |
<Instruct>: Given the context 'Nevertheless, discrimination between species was achieved for SbDV, BLRV, BChV, BMYV, CABYV and either PLRV or BWYV.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [sbdv; blrv; bchv; bmyv]
<Options>: A: bovine syncytial virus (aka bovine foamy virus)
B: buhv-1 (aka bubaline alphaherpesvirus 1)
C: disbo virus
D: beet mild yellowing virus (bmyv (aka beet mild yellowing virus))
E: bsbv (aka beet soil-borne virus) (aka beet soil-borne virus)
F: bluvavirus
G: bovine leukemia virus blv (aka bovine leukemia virus)
H: sindbis virus
I: bk polyomavirus (aka betapolyomavirus hominis)
J: blrv (aka bean leafroll virus) (aka bean leafroll virus)
K: moriarty virus
L: bcv (aka bovine coronavirus) (aka bovine coronavirus)
M: mboke virus
N: bovine hepacivirus
O: sleeping disease virus
P: swine vesicular disease virus
Q: brunton virus
R: bovine respiratory syncytial virus brsv (aka bovine orthopneumovirus)
S: bovine polyomavirus bpyv (aka epsilonpolyomavirus bovis)
T: bovine circovirus
U: None of the above. | [U; J; U; D] |
<Instruct>: Given the context 'Nevertheless, discrimination between species was achieved for SbDV, BLRV, BChV, BMYV, CABYV and either PLRV or BWYV.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [sbdv; blrv; bchv; bmyv]
<Options>: A: blrv (aka bean leafroll virus) (aka bean leafroll virus)
B: bovine respiratory syncytial virus brsv (aka bovine orthopneumovirus)
C: sindbis virus
D: bmyv (aka beet mild yellowing virus) (aka beet mild yellowing virus)
E: mboke virus
F: bussuquara virus
G: bubo bubo herpesvirus
H: bovine herpesvirus-1 (aka bovine alphaherpesvirus 1)
I: bruthen virus
J: bovine papular stomatitis virus
K: bovine syncytial virus (aka bovine foamy virus)
L: disbo virus
M: bovine polyomavirus bpyv (aka epsilonpolyomavirus bovis)
N: bhv-4 (aka bovine gammaherpesvirus 4)
O: moriarty virus
P: bk virus (aka betapolyomavirus hominis)
Q: buffalo creek virus
R: bovine circovirus
S: blunervirus vaccinii
T: bovine leukemia virus (blv (aka bovine leukemia virus))
U: None of the above. | [U; A; U; D] |
<Instruct>: Given the context 'Nevertheless, discrimination between species was achieved for SbDV, BLRV, BChV, BMYV, CABYV and either PLRV or BWYV.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [sbdv; blrv; bchv; bmyv]
<Options>: A: bltrv-1 (aka betaricinrhavirus scapularis)
B: buffalo creek virus
C: broconha virus (aka bruconha virus)
D: bovine respiratory syncytial virus brsv (aka bovine orthopneumovirus)
E: brome mosaic virus (bmv (aka brome mosaic virus))
F: bovine hepacivirus
G: swine vesicular disease virus
H: cattle blood-associated circovirus-like virus
I: bsbv (aka beet soil-borne virus) (aka beet soil-borne virus)
J: benyvirus
K: bubo bubo herpesvirus
L: salmon pancreas disease virus (spdv (aka salmon pancreas disease virus))
M: sacbrood virus (sac brood virus) (aka sacbrood virus)
N: mandrill polyomavirus
O: bruthen virus
P: bvdv-1 (aka bovine viral diarrhea virus 1)
Q: bmyv (aka beet mild yellowing virus) (aka beet mild yellowing virus)
R: blrv (aka bean leafroll virus) (aka bean leafroll virus)
S: bovine papular stomatitis virus
T: brambyvirus
U: None of the above. | [U; R; U; Q] |
<Instruct>: Given the context 'Nevertheless, discrimination between species was achieved for SbDV, BLRV, BChV, BMYV, CABYV and either PLRV or BWYV.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [sbdv; blrv; bchv; bmyv]
<Options>: A: mandrill polyomavirus
B: brome mosaic virus (bmv (aka brome mosaic virus))
C: broconha virus (aka bruconha virus)
D: bruthen virus
E: bvdv-1 (aka bovine viral diarrhea virus 1)
F: bltrv-1 (aka betaricinrhavirus scapularis)
G: salmon pancreas disease virus (spdv (aka salmon pancreas disease virus))
H: sacbrood virus (sac brood virus) (aka sacbrood virus)
I: bovine papular stomatitis virus
J: bovine respiratory syncytial virus brsv (aka bovine orthopneumovirus)
K: bovine hepacivirus
L: buffalo creek virus
M: blrv (aka bean leafroll virus) (aka bean leafroll virus)
N: swine vesicular disease virus
O: cattle blood-associated circovirus-like virus
P: bubo bubo herpesvirus
Q: bsbv (aka beet soil-borne virus) (aka beet soil-borne virus)
R: benyvirus
S: brambyvirus
T: None of the above. | [T; M; T; T] |
<Instruct>: Given the context 'Nevertheless, discrimination between species was achieved for SbDV, BLRV, BChV, BMYV, CABYV and either PLRV or BWYV.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [cabyv; plrv; bwyv]
<Options>: A: potyvirus wisteriae
B: canary polyomavirus (capyv) (aka canary polyomavirus)
C: leguminosae-associated picorna-like virus
D: potyvirus cannae
E: berrek virus
F: cucurbit aphid-borne yellows virus (cabyv) (aka cucurbit aphid-borne yellows virus)
G: wabat virus
H: peony leafroll associated virus (aka peony leafroll-associated virus)
I: carissa potyvirus
J: beet western yellows virus (bwyv (aka beet western yellows virus))
K: potato leaf-roll virus (aka potato leafroll virus)
L: pan troglodytes lymphocryptovirus
M: bruthen virus
N: plpav (aka peach leaf pitting-associated virus)
O: None of the above. | [F; K; J] |
<Instruct>: Given the context 'Nevertheless, discrimination between species was achieved for SbDV, BLRV, BChV, BMYV, CABYV and either PLRV or BWYV.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [cabyv; plrv; bwyv]
<Options>: A: leguminosae-associated picorna-like virus
B: bovine polyomavirus bpyv (aka epsilonpolyomavirus bovis)
C: carissa potyvirus
D: potyvirus caricae
E: bk virus (aka betapolyomavirus hominis)
F: plrv1 (aka phomosis penoulivirus)
G: peony leafroll associated virus (aka peony leafroll-associated virus)
H: berrek virus
I: bro virus
J: boteke virus
K: cucurbit aphid-borne yellows virus (cabyv) (aka cucurbit aphid-borne yellows virus)
L: cherry leafroll virus (aka cherry leaf roll virus)
M: potato leafroll virus (plrv (aka potato leafroll virus))
N: bwyv (aka beet western yellows virus) (aka beet western yellows virus)
O: None of the above. | [K; M; N] |
<Instruct>: Given the context 'Nevertheless, discrimination between species was achieved for SbDV, BLRV, BChV, BMYV, CABYV and either PLRV or BWYV.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [cabyv; plrv; bwyv]
<Options>: A: beet western yellows virus (bwyv (aka beet western yellows virus))
B: chrocaberb virus
C: chrocabarb virus
D: potyvirus caricae
E: potato leaf roll virus (aka potato leafroll virus)
F: cucurbit aphid-borne yellows virus (cabyv) (aka cucurbit aphid-borne yellows virus)
G: burke virus
H: potyvirus
I: cotton leaf roll virus (aka cotton leafroll virus)
J: benyvirus
K: bruthen virus
L: leguminosae-associated picorna-like virus
M: pennypacker partiti-like virus
N: bean leaf roll virus (aka bean leafroll virus)
O: beejeyvirus
P: None of the above. | [F; E; A] |
<Instruct>: Given the context 'Adaptation of a Madin-Darby canine kidney cell line to suspension growth in serum-free media and comparison of its ability to produce avian influenza virus to Vero and BHK21 cell lines.
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [canine]
<Options>: A: canis
B: canis lupus (grey wolf) (aka canis lupus)
C: this canus
D: domestic cat (aka felis catus)
E: canis lupus indica (aka canis indica)
F: None of the above. | [B] |
<Instruct>: Given the context 'Adaptation of a Madin-Darby canine kidney cell line to suspension growth in serum-free media and comparison of its ability to produce avian influenza virus to Vero and BHK21 cell lines.
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [canine]
<Options>: A: canis lupus indica (aka canis indica)
B: domestic cat (aka felis catus)
C: canis
D: this canus
E: None of the above. | [E] |
<Instruct>: Given the context 'Madin-Darby canine kidney (MDCK) cells are currently considered for influenza vaccine manufacturing.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [canine]
<Options>: A: canis familiaris (aka canis lupus familiaris)
B: canis lupus (grey wolf) (aka canis lupus)
C: canis dingo (aka canis lupus dingo)
D: canis thous (aka cerdocyon thous)
E: domestic cat (aka felis catus)
F: None of the above. | [B] |
<Instruct>: Given the context 'Tremula longifila, a zooflagellate glider on both flagella (unlike other Cercozoa), is the most divergent filosan (Tremulida ord. n.).', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [tremula longifila]
<Options>: A: anthophycus longifolius
B: bigelowiella longifila
C: zamia longifolia (aka encephalartos longifolius)
D: feronia longula (aka orthomus longulus)
E: chrysis longula
F: None of the above. | [F] |
<Instruct>: Given the context 'Micrometopion nutans is a eukaryote-eating gliding zooflagellate like Metopion and Metromonas.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [micrometopion nutans]
<Options>: A: micrometopion nutans
B: melampodium nutans
C: prosaptia nutans (ctenopteris nutans) (aka prosaptia nutans)
D: purdiaea nutans
E: miconia nutans
F: None of the above. | [A] |
<Instruct>: Given the context 'Minimassisteria diva is a widespread trimorphic marine amoeboflagellate granofilosan.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [minimassisteria diva]
<Options>: A: hyposmocoma divisa
B: divana diva (castnia diva) (aka divana diva)
C: boninia divae
D: minimassisteria diva
E: cteisella divalis
F: None of the above. | [D] |
<Instruct>: Given the context 'Peregrinia clavideferens, a non-testate, scale-bearing, filose amoeba, branches deeply in Thaumatomonadida, which are probably sisters to Spongomonadida.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [peregrinia clavideferens]
<Options>: A: lonchaea peregrina
B: podapion gallicola
C: cryptotis peregrinus (blarina mexicana peregrina) (aka cryptotis peregrinus)
D: peregrinus maidis (corn hopper) (aka peregrinus maidis)
E: cacopsylla peregrina
F: None of the above. | [F] |
<Instruct>: Given the context 'Nudifila producta is a filose amoeboflagellate related to Clautriavia and Marimonadida (ord.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [nudifila producta]
<Options>: A: agrostis producta
B: partula producta
C: nudifila producta
D: ranella producta (aka aspella producta)
E: dennstaedtia producta
F: None of the above. | [C] |
<Instruct>: Given the context 'Scale-free Ovulinata parva is sister to Paulinella, so imbricate silica scales can be lost.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [ovulinata parva]
<Options>: A: ovulina parva (aka ovulinata parva)
B: oncopera parva
C: aequorea parva
D: boidinia parva
E: oligota parva
F: None of the above. | [A] |
<Instruct>: Given the context 'Endogenous regulation of the growth-rate responses of a spring-dwelling strain of the freshwater alga, Chlorella minutissima, to light and temperature.
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [chlorella minutissima]
<Options>: A: favolaschia minutissima
B: dunaliella minutissima
C: flagelloscypha minutissima (cyphella minutissima) (aka flagelloscypha minutissima)
D: phylloporia minutissima
E: chlorella minutissima (aka neodesmus pupukensis)
F: None of the above. | [E] |
<Instruct>: Given the context 'The paper presents a laboratory investigation of the temperature- and light- dependence of autotrophic growth of the alga Chlorella minutissima.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [chlorella minutissima]
<Options>: A: chlorella minutissima (aka neodesmus pupukensis)
B: calopia minutissima
C: dunaliella minutissima
D: aphanothece minutissima
E: cyphella minutissima (aka flagelloscypha minutissima)
F: None of the above. | [A] |
<Instruct>: Given the context 'At all temperatures, the maximum rates of growth observed are strikingly slower than those of other Chlorella strains and of other small algae, reported in the literature, even when correction is made for continuous light.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [chlorella strains]
<Options>: A: chlorella sp. rel
B: chlorella vulgaris var. viridis (aka chlorella vulgaris)
C: chlorodiella
D: halochlorella
E: chlorella chlorelloides (brachionococcus chlorelloides) (aka chlorella chlorelloides)
F: None of the above. | [F] |
<Instruct>: Given the context 'We first increased intraspecific sampling for Tetrahymena canadensis, Tetrahymena hegewischi, Tetrahymena pyriformis, Tetrahymena rostrata, Tetrahymena thermophila, and Tetrahymena tropicalis.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [tetrahymena canadensis; tetrahymena hegewischi; tetrahymena pyriformis; tetrahymena rostrata]
<Options>: A: aeshna canadensis
B: songthela pyriformis
C: gigantochloa rostrata
D: hydrotaea rostrata (aka australophyra rostrata)
E: tetrahymena hegewishii (aka tetrahymena hegewischi)
F: tetrahymena pyriformis
G: tetrahymena rostrata
H: triumfetta heudelotii
I: tetrahymena canadensis
J: stagondoeca pyriformis
K: tetratheca ciliata
L: amblyospora canadensis
M: zoothera heinrichi (sulawesi mountain-thrush) (aka zoothera heinrichi)
N: tillandsia hegeri
O: hagenella canadensis (neuronia canadensis) (aka hagenella canadensis)
P: nigrospora pyriformis
Q: tetrastichus heeringi
R: trophithauma rostratum
S: tolypella canadensis (aka sphaerochara canadensis)
T: aphodius pyriformis
U: None of the above. | [I; E; F; G] |
<Instruct>: Given the context 'We first increased intraspecific sampling for Tetrahymena canadensis, Tetrahymena hegewischi, Tetrahymena pyriformis, Tetrahymena rostrata, Tetrahymena thermophila, and Tetrahymena tropicalis.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [tetrahymena canadensis; tetrahymena hegewischi; tetrahymena pyriformis; tetrahymena rostrata]
<Options>: A: tetramitus rostratus
B: aeshna canadensis
C: tetrastichus heeringi
D: hydnum canadense
E: podospora pyriformis (sordaria pyriformis) (aka podospora pyriformis)
F: tetratheca ciliata
G: helicotylenchus canadensis
H: tetrahymena canadensis
I: aphyosemion heinemanni (heinemann's killifish) (aka aphyosemion heinemanni)
J: aphodius pyriformis
K: homalomena rostrata
L: tolypella canadensis (aka sphaerochara canadensis)
M: tetrahymena rostrata
N: tetrahymena hegewishii (aka tetrahymena hegewischi)
O: songthela pyriformis
P: rhynchomesostoma rostratum (fasciola rostrata) (aka rhynchomesostoma rostratum)
Q: tetrahymena pyriformis
R: thalassoma heiseri
S: euphaedra hewitsoni
T: eurhoptus pyriformis
U: None of the above. | [H; N; Q; M] |
<Instruct>: Given the context 'We first increased intraspecific sampling for Tetrahymena canadensis, Tetrahymena hegewischi, Tetrahymena pyriformis, Tetrahymena rostrata, Tetrahymena thermophila, and Tetrahymena tropicalis.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [tetrahymena canadensis; tetrahymena hegewischi; tetrahymena pyriformis; tetrahymena rostrata]
<Options>: A: tetramitus rostratus
B: tetrahymena rostrata
C: tetrahymena hegewishii (aka tetrahymena hegewischi)
D: helictochloa gervaisii (helictotrichon gervaisii) (aka helictochloa gervaisii)
E: thalassoma heiseri
F: tetrahymena pyriformis
G: trypetoptera canadensis (tetanocera canadensis) (aka trypetoptera canadensis)
H: nigrospora pyriformis
I: eurhoptus pyriformis
J: maianthemum canadense
K: coptotriche heinemanni (tischeria heinemanni) (aka coptotriche heinemanni)
L: rhynchomesostoma rostratum (fasciola rostrata) (aka rhynchomesostoma rostratum)
M: tetrahymena asiatica
N: trebouxia pyriformis (aka asterochloris glomerata)
O: tetrahymena canadensis
P: septoria canadensis
Q: habenaria rostrata
R: tetraphleps canadensis
S: hua pyriformis
T: phthinomita heinigerae
U: None of the above. | [O; C; F; B] |
<Instruct>: Given the context 'We first increased intraspecific sampling for Tetrahymena canadensis, Tetrahymena hegewischi, Tetrahymena pyriformis, Tetrahymena rostrata, Tetrahymena thermophila, and Tetrahymena tropicalis.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [tetrahymena canadensis; tetrahymena hegewischi; tetrahymena pyriformis; tetrahymena rostrata]
<Options>: A: tetrahymena patula
B: tillandsia heubergeri
C: zeiraphera canadensis
D: hagenella canadensis (neuronia canadensis) (aka hagenella canadensis)
E: trirhabda canadensis
F: tetrahymena hegewischi (tetrahymena hegewishii) (aka tetrahymena hegewischi)
G: coptotriche heinemanni (tischeria heinemanni) (aka coptotriche heinemanni)
H: rhynchomesostoma rostratum (fasciola rostrata) (aka rhynchomesostoma rostratum)
I: tetrahymena pyriformis
J: tetrahymena rostrata
K: gigantochloa rostrata
L: purpureomyces pyriformis
M: homalomena rostrata
N: podospora pyriformis (sordaria pyriformis) (aka podospora pyriformis)
O: tulipa heweri
P: tetrahymena canadensis
Q: tetramitus rostratus
R: hydrophyllum canadense
S: eugenia pyriformis
T: geomalia heinrichi (aka zoothera heinrichi)
U: None of the above. | [P; F; I; J] |
<Instruct>: Given the context 'We first increased intraspecific sampling for Tetrahymena canadensis, Tetrahymena hegewischi, Tetrahymena pyriformis, Tetrahymena rostrata, Tetrahymena thermophila, and Tetrahymena tropicalis.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [tetrahymena thermophila; tetrahymena tropicalis]
<Options>: A: tetrahymena pyriformis
B: tetrahymena thermophila
C: haemagogus tropicalis
D: jhaorihella thermophila
E: elioraea thermophila
F: pseudozobellia thermophila
G: tetrahymena tropicalis
H: phakellia tropicalis
I: truncospora tropicalis
J: tylopilus tropicalis
K: None of the above. | [B; G] |
<Instruct>: Given the context 'We first increased intraspecific sampling for Tetrahymena canadensis, Tetrahymena hegewischi, Tetrahymena pyriformis, Tetrahymena rostrata, Tetrahymena thermophila, and Tetrahymena tropicalis.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [tetrahymena thermophila; tetrahymena tropicalis]
<Options>: A: tetrahymena pyriformis
B: tetrahymena thermophila
C: tetrahymena vorax
D: pentila tropicalis (tingra tropicalis) (aka pentila tropicalis)
E: atrimonas thermophila
F: tetrahymena tropicalis
G: tepidiforma thermophila
H: myceliophthora thermophila (aka thermothelomyces thermophilus)
I: tetrahymena australis
J: tepidiphilus thermophilus
K: None of the above. | [B; F] |
<Instruct>: Given the context 'We first increased intraspecific sampling for Tetrahymena canadensis, Tetrahymena hegewischi, Tetrahymena pyriformis, Tetrahymena rostrata, Tetrahymena thermophila, and Tetrahymena tropicalis.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [tetrahymena thermophila; tetrahymena tropicalis]
<Options>: A: pentila tropicalis (tingra tropicalis) (aka pentila tropicalis)
B: atrimonas thermophila
C: tetrahymena thermophila
D: tepidiforma thermophila
E: tetrahymena vorax
F: tepidiphilus thermophilus
G: tetrahymena pyriformis
H: tetrahymena australis
I: myceliophthora thermophila (aka thermothelomyces thermophilus)
J: None of the above. | [C; J] |
<Instruct>: Given the context 'Functional analysis of a mitochondrial phosphopantetheinyl transferase (PPTase) gene pptB in Aspergillus fumigatus.
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [aspergillus fumigatus]
<Options>: A: aspergillus cerealis
B: aspergillus rubrum (aka aspergillus ruber)
C: aspergillus asperus (aka aspergillus asper)
D: sartorya fumigata (aka aspergillus fumigatus)
E: aspergillus aureus
F: None of the above. | [D] |
<Instruct>: Given the context 'The mitochondrial phosphopantetheinyl transferase gene pptB of the opportunistic pathogen Aspergillus fumigatus has been identified and characterised.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [aspergillus fumigatus]
<Options>: A: aspergillus asper (aspergillus asperus) (aka aspergillus asper)
B: aspergillus cerealis
C: neosartorya fumigata (aka aspergillus fumigatus)
D: aspergillus rubrum (aka aspergillus ruber)
E: aspergillus aureus
F: None of the above. | [C] |
<Instruct>: Given the context 'Intraspecific trait variation and covariation in a widespread tree species (Nothofagus pumilio) in southern Chile.
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [nothofagus pumilio]
<Options>: A: haemanthus pumilio
B: conotrachelus pumilio
C: campsicnemus pumilio (dolichopus pumilio) (aka campsicnemus pumilio)
D: mazus pumilio
E: fagus pumilio (aka nothofagus pumilio)
F: None of the above. | [E] |
<Instruct>: Given the context 'Here we quantified intraspecific variation and covariation of leaf mass per area (LMA) and wood density (WD) in monospecific forests of the widespread tree species Nothofagus pumilio to determine its magnitude and whether it is related to environmental conditions and ontogeny.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [nothofagus pumilio]
<Options>: A: nothofagus pumilio (fagus pumilio) (aka nothofagus pumilio)
B: dendrobates pumilio (aka oophaga pumilio)
C: papilio pumilio (aka gegenes pumilio)
D: haemanthus pumilio
E: mazus pumilio
F: None of the above. | [A] |
<Instruct>: Given the context 'Functional traits of N. pumilio exhibited nonnegligible variation; LMA varied for the most part with temperature, while WD mostly varied with moisture and ontogeny.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [n. pumilio]
<Options>: A: novius pumilus (rodolia pumila) (aka novius pumilus)
B: ischnura pumilio
C: nothofagus pumilio (fagus pumilio) (aka nothofagus pumilio)
D: nothotelus nigellus
E: malayan nawab (aka polyura moori)
F: None of the above. | [C] |
<Instruct>: Given the context 'Systemic virus-induced gene silencing allows functional characterization of maize genes during biotrophic interaction with Ustilago maydis.
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [maize; ustilago maydis]
<Options>: A: ustilago bromina
B: ustilago filiformis
C: teosinte (aka zea perennis)
D: avenula agropyroides (aka helictochloa agropyroides)
E: maize (aka zea mays)
F: corn smut (aka mycosarcoma maydis)
G: ustilago porosa
H: ustilago phragmitis
I: maize weevil (aka sitophilus zeamais)
J: None of the above. | [E; F] |
<Instruct>: Given the context 'Systemic virus-induced gene silencing allows functional characterization of maize genes during biotrophic interaction with Ustilago maydis.
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [maize; ustilago maydis]
<Options>: A: zelus grassans
B: ustilago phragmitis
C: zea mays (zea mays var. japonica) (aka zea mays)
D: ustilago levis
E: ustilago oxalidis (aka thecaphora oxalidis)
F: corn smut (aka mycosarcoma maydis)
G: mycosarcoma maydis (ustilago maydis) (aka mycosarcoma maydis)
H: agrococcus terreus
I: ustilago striiformis
J: avenula agropyroides (aka helictochloa agropyroides)
K: None of the above. | [C; G] |
<Instruct>: Given the context 'Infection of maize (Zea mays) plants with the corn smut fungus Ustilago maydis leads to the formation of large tumors on the stem, leaves and inflorescences.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [maize; zea mays; corn; ustilago maydis]
<Options>: A: maize (aka zea mays subsp. mays)
B: zela zeus
C: zelus tetracanthus
D: zea mexicana (aka zea mays subsp. mexicana)
E: ustilago maydis dsrna virus
F: corn earworm (aka helicoverpa zea)
G: maize weevil (aka sitophilus zeamais)
H: agrococcus citreus
I: ustilago phragmitis
J: corn ear worm (aka helicoverpa armigera)
K: phalaena zea (aka helicoverpa zea)
L: ustilago striiformis
M: ustilago
N: uredo maydis (aka mycosarcoma maydis)
O: cornus alpina
P: maize (aka zea mays)
Q: squirrel-corn (aka dicentra canadensis)
R: None of the above. | [P; P; P; N] |
<Instruct>: Given the context 'Infection of maize (Zea mays) plants with the corn smut fungus Ustilago maydis leads to the formation of large tumors on the stem, leaves and inflorescences.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [maize; zea mays; corn; ustilago maydis]
<Options>: A: ustilago porosa
B: maize weevil (aka sitophilus zeamais)
C: zeus nebulosus (aka zenopsis nebulosus)
D: perennial teosinte (aka zea perennis)
E: phalaena zea (aka helicoverpa zea)
F: zela zeus
G: agromyces ramosum (aka agromyces ramosus)
H: ustilago nigra (aka ustilago avenae)
I: corn cyst nematode (aka heterodera zeae)
J: maize (aka zea mays subsp. mays)
K: ustilago esculenta
L: squirrel-corn (aka dicentra canadensis)
M: zea mays (zea mays var. japonica) (aka zea mays)
N: ustilago maydis virus
O: cornus alpina
P: zelus grassans
Q: cornus angustata (aka cornus elliptica)
R: mycosarcoma maydis (ustilago maydis) (aka mycosarcoma maydis)
S: None of the above. | [M; M; M; R] |
<Instruct>: Given the context 'Infection of maize (Zea mays) plants with the corn smut fungus Ustilago maydis leads to the formation of large tumors on the stem, leaves and inflorescences.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [maize; zea mays; corn; ustilago maydis]
<Options>: A: zelus tetracanthus
B: zea mexicana (aka zea mays subsp. mexicana)
C: squirrel-corn (aka dicentra canadensis)
D: maize (aka zea mays)
E: corn smut (aka mycosarcoma maydis)
F: ustilago oxalidis (aka thecaphora oxalidis)
G: agrococcus citreus
H: zephyranthes challensis
I: zea perennis (perennial teosinte) (aka zea perennis)
J: ustilago maydis virus
K: ustilago porosa
L: zeus nebulosus (aka zenopsis nebulosus)
M: cornus angustata (aka cornus elliptica)
N: avenula agropyroides (aka helictochloa agropyroides)
O: heliothis zea (aka helicoverpa zea)
P: perennial teosinte (aka zea perennis)
Q: ustilago avenae (ustilago aegilopsidis) (aka ustilago avenae)
R: None of the above. | [D; D; D; E] |
<Instruct>: Given the context 'Infection of maize (Zea mays) plants with the corn smut fungus Ustilago maydis leads to the formation of large tumors on the stem, leaves and inflorescences.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [maize; zea mays; corn; ustilago maydis]
<Options>: A: ustilago phragmitis
B: agrococcus citreus
C: avena agropyroides (aka helictochloa agropyroides)
D: agromyces ramosus (agromyces ramosum) (aka agromyces ramosus)
E: maize weevil (aka sitophilus zeamais)
F: corn earworm (aka helicoverpa zea)
G: agrococcus
H: zeus nebulosus (aka zenopsis nebulosus)
I: ustilago maydis dsrna virus
J: corn smut (aka mycosarcoma maydis)
K: squirrel-corn (aka dicentra canadensis)
L: ustilago bromina
M: zephyranthes challensis
N: zea mays (zea mays var. japonica) (aka zea mays)
O: ustilago maydis (aka mycosarcoma maydis)
P: ustilago maydis virus
Q: tylenchus zeae
R: None of the above. | [N; N; N; O] |
<Instruct>: Given the context 'In this biotrophic interaction, plant defense responses are actively suppressed by the pathogen, and previous transcriptome analyses of infected maize plants showed massive and stage-specific changes in host gene expression during disease progression.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [maize]
<Options>: A: zea mays (zea mays var. japonica) (aka zea mays)
B: agrococcus citreus
C: maize weevil (aka sitophilus zeamais)
D: corn ear worm (aka helicoverpa armigera)
E: maize (aka zea mays subsp. mays)
F: None of the above. | [A] |
<Instruct>: Given the context 'To identify maize genes that are functionally involved in the interaction with U. maydis, we adapted a virus-induced gene silencing (VIGS) system based on the brome mosaic virus (BMV) for maize.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [maize; u. maydis]
<Options>: A: ustilago aegilopsidis (aka ustilago avenae)
B: uredo maydis (aka mycosarcoma maydis)
C: zelus grassans
D: ustilago maydis virus
E: zea ramosa (aka zea mays subsp. mays)
F: agrococcus terreus
G: ustilago esculenta
H: mycosphaerella zeae-maydis (aka didymella maydis)
I: corn ear worm (aka helicoverpa armigera)
J: zea mays (zea mays var. japonica) (aka zea mays)
K: None of the above. | [J; B] |
<Instruct>: Given the context 'To identify maize genes that are functionally involved in the interaction with U. maydis, we adapted a virus-induced gene silencing (VIGS) system based on the brome mosaic virus (BMV) for maize.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [maize; u. maydis]
<Options>: A: mycosarcoma maydis (ustilago maydis) (aka mycosarcoma maydis)
B: maize (aka zea mays)
C: ustilago vinosa
D: zelus grassans
E: ustilago maydis dsrna virus
F: corn smut (aka mycosarcoma maydis)
G: ustilago avenae (ustilago aegilopsidis) (aka ustilago avenae)
H: agrococcus terreus
I: corn earworm (aka helicoverpa zea)
J: ustilago maydis virus 1
K: None of the above. | [B; A] |
<Instruct>: Given the context 'To identify maize genes that are functionally involved in the interaction with U. maydis, we adapted a virus-induced gene silencing (VIGS) system based on the brome mosaic virus (BMV) for maize.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [maize; u. maydis]
<Options>: A: ustilago maydis dsrna virus
B: corn earworm (aka helicoverpa zea)
C: mycosarcoma maydis (ustilago maydis) (aka mycosarcoma maydis)
D: ustilago avenae (ustilago aegilopsidis) (aka ustilago avenae)
E: zelus grassans
F: agrococcus terreus
G: ustilago vinosa
H: corn smut (aka mycosarcoma maydis)
I: ustilago maydis virus 1
J: None of the above. | [J; C] |
<Instruct>: Given the context 'Conditions were established that allowed successful U. maydis infection of BMV-preinfected maize plants.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [u. maydis]
<Options>: A: ustilago maydis virus 1
B: ustilago phragmitis
C: ustilago maydis (aka mycosarcoma maydis)
D: ustilago oxalidis (aka thecaphora oxalidis)
E: ustilago striiformis
F: None of the above. | [C] |
<Instruct>: Given the context 'This set-up enabled quantification of VIGS and its impact on U. maydis infection using a quantitative real-time PCR (qRT-PCR)-based readout.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [u. maydis]
<Options>: A: ustilago aegilopsidis (aka ustilago avenae)
B: ustilago maydis virus
C: ustilago striiformis
D: mycosarcoma maydis (ustilago maydis) (aka mycosarcoma maydis)
E: ustilago esculenta
F: None of the above. | [D] |
<Instruct>: Given the context 'In proof-of-principle experiments, an U. maydis-induced terpene synthase was shown to negatively regulate disease development while a protein involved in cell death inhibition was required for full virulence of U. maydis.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [u. maydis]
<Options>: A: ustilago esculenta
B: uredo maydis (aka mycosarcoma maydis)
C: ustilago maydis dsrna virus
D: didymella maydis (yellow leaf blight of maize) (aka didymella maydis)
E: ustilago avenae (ustilago aegilopsidis) (aka ustilago avenae)
F: None of the above. | [B] |
<Instruct>: Given the context 'The results suggest that this system is a versatile tool for the rapid identification of maize genes that determine compatibility with U. maydis.
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [maize; u. maydis]
<Options>: A: agrococcus terreus
B: agrococcus citreus
C: ustilago virens (aka ustilaginoidea virens)
D: zea perennis (perennial teosinte) (aka zea perennis)
E: ustilago maydis virus
F: ustilago maydis dsrna virus
G: ustilago maydis (aka mycosarcoma maydis)
H: ustilago striiformis
I: maize (aka zea mays)
J: heliothis zea (aka helicoverpa zea)
K: None of the above. | [I; G] |
<Instruct>: Given the context 'The results suggest that this system is a versatile tool for the rapid identification of maize genes that determine compatibility with U. maydis.
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [maize; u. maydis]
<Options>: A: zea mays (zea mays var. japonica) (aka zea mays)
B: ustilago virens (aka ustilaginoidea virens)
C: heliothis zea (aka helicoverpa zea)
D: ustilago maydis virus 1
E: ustilago nigra (aka ustilago avenae)
F: maize weevil (aka sitophilus zeamais)
G: avenula agropyroides (aka helictochloa agropyroides)
H: maize (aka zea mays subsp. mays)
I: corn smut (aka mycosarcoma maydis)
J: ustilago striiformis
K: None of the above. | [A; I] |
<Instruct>: Given the context 'The second face of a known player: Arabidopsis silencing suppressor AtXRN4 acts organ-specifically.
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [arabidopsis]
<Options>: A: plantago australis
B: arabidopsis thaliana (mouse-ear cress) (aka arabidopsis thaliana)
C: arabidopsis thaliana x arabidopsis arenosa
D: agrotis aurulenta (aka euxoa aurulenta)
E: arabidopsis arenosa x arabidopsis thaliana
F: None of the above. | [B] |
<Instruct>: Given the context 'Stable expression of the Potato leaf roll virus movement protein MP17 in Arabidopsis results in a carbohydrate export block and stunted growth.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [potato leaf roll virus; arabidopsis]
<Options>: A: plantago africana
B: potato yellow vein virus
C: plrv (aka potato leafroll virus) (aka potato leafroll virus)
D: potato rugose stunting virus
E: arabidella
F: arabis neglecta (aka arabidopsis neglecta)
G: arabis thaliana (aka arabidopsis thaliana)
H: bean leaf roll virus (aka bean leafroll virus)
I: potato rough dwarf virus
J: arabis lyrata (aka arabidopsis lyrata)
K: None of the above. | [C; G] |
<Instruct>: Given the context 'Stable expression of the Potato leaf roll virus movement protein MP17 in Arabidopsis results in a carbohydrate export block and stunted growth.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [potato leaf roll virus; arabidopsis]
<Options>: A: arabis thaliana (aka arabidopsis thaliana)
B: potato rugose stunting virus
C: arabis lyrata (aka arabidopsis lyrata)
D: plantago africana
E: bean leaf roll virus (aka bean leafroll virus)
F: potato yellow vein virus
G: potato rough dwarf virus
H: arabis neglecta (aka arabidopsis neglecta)
I: arabidella
J: None of the above. | [J; A] |
<Instruct>: Given the context 'Stable expression of the Potato leaf roll virus movement protein MP17 in Arabidopsis results in a carbohydrate export block and stunted growth.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [potato leaf roll virus; arabidopsis]
<Options>: A: arabidopsis arenosa x arabidopsis thaliana
B: potato rough dwarf virus
C: rose yellow leaf virus
D: tobacco leaf rugose virus
E: arabis arenosa (aka arabidopsis arenosa)
F: arabis neglecta (aka arabidopsis neglecta)
G: cotton leaf roll virus (aka cotton leafroll virus)
H: arabidopsis thaliana x arabidopsis halleri
I: arabis thaliana (aka arabidopsis thaliana)
J: potato leafroll virus (plrv (aka potato leafroll virus))
K: None of the above. | [J; I] |
<Instruct>: Given the context 'To identify host factors essential for viral infection, we screened a progeny population of EMS (ethyl methanesulfonate)-mutagenized Arabidopsis expressing a MP17:GFP fusion for suppressor mutants with restored wild type-like phenotype.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [arabidopsis]
<Options>: A: euxoa agricola (noctua agricola) (aka euxoa agricola)
B: arabis neglecta (aka arabidopsis neglecta)
C: plantago africana
D: plantago afra (african plantain) (aka plantago afra)
E: arabis thaliana (aka arabidopsis thaliana)
F: None of the above. | [E] |
<Instruct>: Given the context 'Two suppressor mutants showed decreased susceptibility against Turnip mosaic virus and post-transcriptional silencing of MP17:GFP', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [turnip mosaic virus]
<Options>: A: cotton mosaic virus
B: tobacco mosaic virus (vulgare)
C: tomato mosaic virus
D: soil-borne wheat mosaic virus
E: turnip mosaic virus, tumv (aka turnip mosaic virus)
F: None of the above. | [E] |
<Instruct>: Given the context 'Overall, these findings point towards an organ-specific regulation of gene silencing in Arabidopsis.
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [arabidopsis]
<Options>: A: arabidopsis arenosa (cardaminopsis arenosa) (aka arabidopsis arenosa)
B: arabis lyrata (aka arabidopsis lyrata)
C: arabis thaliana (aka arabidopsis thaliana)
D: plantago africana
E: plantago afra (african plantain) (aka plantago afra)
F: None of the above. | [C] |
<Instruct>: Given the context 'In this study, we examined the preference and performance of a herbivorous leafminer (Liriomyza huidobrensis) and its parasitic wasp (Opius dissitus) on three tomato genotypes: a wild-type (WT) plant, a JA biosynthesis (spr2) mutant, and a JA-overexpression 35S::prosys plant.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [leafminer; liriomyza huidobrensis; wasp; opius dissitus]
<Options>: A: opius dissitus
B: wawi
C: opius exiguus
D: garden pea leafminer (aka chromatomyia horticola)
E: opius melleus (aka diachasmimorpha mellea)
F: tachyporus opicus (aka sepedophilus opicus)
G: wastrivirus
H: pea leafminer (aka liriomyza huidobrensis)
I: liriomyza violivora (galiomyza violivora) (aka liriomyza violivora)
J: leaf bugs (aka miridae)
K: serpentine leafminer (aka liriomyza brassicae)
L: liriomyza langei
M: garypus dissitus
N: songthela huayanxi
O: liriomyza septentrionalis
P: paper wasps (aka polistinae)
Q: spodoptera frugiperda (fall armyworm) (aka spodoptera frugiperda)
R: australian paper wasp (aka polistes humilis)
S: leafminer moths (aka gracillariidae)
T: None of the above. | [H; H; A; A] |
<Instruct>: Given the context 'In this study, we examined the preference and performance of a herbivorous leafminer (Liriomyza huidobrensis) and its parasitic wasp (Opius dissitus) on three tomato genotypes: a wild-type (WT) plant, a JA biosynthesis (spr2) mutant, and a JA-overexpression 35S::prosys plant.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [leafminer; liriomyza huidobrensis; wasp; opius dissitus]
<Options>: A: liris agilis
B: wasp picorna-like virus
C: opistophtalmus carinatus (aka opistophthalmus carinatus)
D: wisapismic virus 1
E: leafminer moths (aka gracillariidae)
F: liriomyza helianthi
G: leptaulax
H: wawi
I: pea leafminer (aka liriomyza huidobrensis)
J: cabbage leafminer (aka liriomyza brassicae)
K: ameletus dissitus
L: opifex fuscus
M: ingerixalus hui (aka zhangixalus hui)
N: catops oblitus (aka dissochaetus oblitus)
O: common paper wasp (aka polistes fuscatus)
P: pimpinella huillensis
Q: opius dissitus
R: melissodes lepida (aka eucera lepida)
S: nelson wasp-associated virus 1
T: None of the above. | [I; I; Q; Q] |
<Instruct>: Given the context 'In this study, we examined the preference and performance of a herbivorous leafminer (Liriomyza huidobrensis) and its parasitic wasp (Opius dissitus) on three tomato genotypes: a wild-type (WT) plant, a JA biosynthesis (spr2) mutant, and a JA-overexpression 35S::prosys plant.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [leafminer; liriomyza huidobrensis; wasp; opius dissitus]
<Options>: A: garden pea leafminer (aka chromatomyia horticola)
B: holly leafminers (aka phytomyza)
C: pea leafminer (aka liriomyza huidobrensis)
D: common paper wasp (aka polistes fuscatus)
E: lactifluus dissitus
F: southern armyworm (aka spodoptera eridania)
G: leafcurl plum aphid (aka brachycaudus helichrysi)
H: liriomyza lupinella
I: liriomyza carphephori
J: opius dissitus
K: nelson wasp-associated virus 1
L: opifex fuscus
M: european paper wasp (aka polistes dominula)
N: noctua opima (aka orthosia opima)
O: leafminer moths (aka gracillariidae)
P: ramalina huei
Q: liriomyza septentrionalis
R: wisinpv (aka wiseana signata nucleopolyhedrovirus)
S: opitutus terrae
T: None of the above. | [C; C; J; J] |
<Instruct>: Given the context 'In this study, we examined the preference and performance of a herbivorous leafminer (Liriomyza huidobrensis) and its parasitic wasp (Opius dissitus) on three tomato genotypes: a wild-type (WT) plant, a JA biosynthesis (spr2) mutant, and a JA-overexpression 35S::prosys plant.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [leafminer; liriomyza huidobrensis; wasp; opius dissitus]
<Options>: A: opius dissitus
B: laparocerus dissimilis
C: songthela huayanxi
D: wisinpv (aka wiseana signata nucleopolyhedrovirus)
E: wasp picorna-like virus
F: holly leafminers (aka phytomyza)
G: pea leafminer (aka liriomyza huidobrensis)
H: streaked wave (aka scopula virgulata)
I: rallicola laticephala
J: spotted tentiform leafminer (aka phyllonorycter blancardella)
K: opifex fuscus
L: liriomyza lupini
M: opitutus terrae
N: cerodirphia opis
O: wastrivirus
P: pleiotaxis huillensis
Q: liris atratus (larra atrata) (aka liris atratus)
R: paper wasps (aka polistinae)
S: habenaria huillensis
T: None of the above. | [G; G; A; A] |
<Instruct>: Given the context 'In this study, we examined the preference and performance of a herbivorous leafminer (Liriomyza huidobrensis) and its parasitic wasp (Opius dissitus) on three tomato genotypes: a wild-type (WT) plant, a JA biosynthesis (spr2) mutant, and a JA-overexpression 35S::prosys plant.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [tomato; wild-type (wt) plant; ja biosynthesis (spr2) mutant; ja-overexpression 35s::prosys plant]
<Options>: A: phytoseiulus persimilis
B: medicago italica (medica italica) (aka medicago italica)
C: solanum trifolium
D: solanum dioicum
E: wild soybean (aka glycine soja)
F: jaspis
G: bifc expression vector 35s-spyne
H: plantago nivalis
I: solanum trifidum
J: solanum corifolium
K: potato-bean (aka pachyrhizus erosus)
L: barrel medic (aka medicago truncatula)
M: selenocosmia javanensis
N: soybean thrips jiivi-like virus 2
O: transformation binary vector pbar-35s
P: jassa
Q: campeiostachys drobovii (agropyron drobovii) (aka campeiostachys drobovii)
R: samistivirus jay2jay (streptomyces virus jay2jay) (aka samistivirus jay2jay)
S: plantago varia
T: tomato (aka solanum lycopersicum)
U: None of the above. | [T; T; T; T] |
<Instruct>: Given the context 'In this study, we examined the preference and performance of a herbivorous leafminer (Liriomyza huidobrensis) and its parasitic wasp (Opius dissitus) on three tomato genotypes: a wild-type (WT) plant, a JA biosynthesis (spr2) mutant, and a JA-overexpression 35S::prosys plant.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [tomato; wild-type (wt) plant; ja biosynthesis (spr2) mutant; ja-overexpression 35s::prosys plant]
<Options>: A: transformation binary vector pbar-35s
B: bifc expression vector 35s-spyne
C: juniper browning phytoplasma
D: solanum bicolor
E: streptostachys
F: medica italica (aka medicago italica)
G: agrostis rosei (aka podagrostis rosei)
H: dmsp-degrading marine bacterium ja3
I: indian mustard (aka brassica juncea)
J: plantago maxima
K: lycopersicon chilense (aka solanum chilense)
L: solanum hirtum
M: soybean thrips jivi-like virus 2
N: lycopersicon esculentum (aka solanum lycopersicum)
O: soybean thrips jivi-like virus 1
P: 'saccharum officinarum' grassy shoot disease phytoplasma
Q: wild tobacco (aka nicotiana rustica)
R: plantago americana (aka littorella americana)
S: solanum dioicum
T: jasione crispa
U: None of the above. | [N; N; N; N] |
<Instruct>: Given the context 'In this study, we examined the preference and performance of a herbivorous leafminer (Liriomyza huidobrensis) and its parasitic wasp (Opius dissitus) on three tomato genotypes: a wild-type (WT) plant, a JA biosynthesis (spr2) mutant, and a JA-overexpression 35S::prosys plant.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [tomato; wild-type (wt) plant; ja biosynthesis (spr2) mutant; ja-overexpression 35s::prosys plant]
<Options>: A: phytocoris salicis
B: plantago americana (aka littorella americana)
C: agropyron sosnowskyi (aka elymus sosnowskyi)
D: plantago truncata
E: sphingomonas jaspsi
F: phytoseiulus persimilis
G: solanum florulentum
H: 'saccharum officinarum' grassy shoot disease phytoplasma
I: jasione jankae
J: jojoba (aka simmondsia chinensis)
K: tomato (aka solanum lycopersicum)
L: solanum pyrifolium
M: bifc expression vector 35s-spyne
N: solanum putii
O: plantago uniglumis
P: plantago varia
Q: solanum mammosum
R: indian mustard (aka brassica juncea)
S: juniper browning phytoplasma
T: samak micromys paramyxovirus 2
U: None of the above. | [K; K; K; K] |
<Instruct>: Given the context 'In this study, we examined the preference and performance of a herbivorous leafminer (Liriomyza huidobrensis) and its parasitic wasp (Opius dissitus) on three tomato genotypes: a wild-type (WT) plant, a JA biosynthesis (spr2) mutant, and a JA-overexpression 35S::prosys plant.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [tomato; wild-type (wt) plant; ja biosynthesis (spr2) mutant; ja-overexpression 35s::prosys plant]
<Options>: A: transformation binary vector pbar-35s
B: wild tobacco (aka nicotiana rustica)
C: solanum hirtum
D: sphingomonas jaspsi
E: lycopersicon esculentum (aka solanum lycopersicum)
F: 'juniperus excelsa' phytoplasma
G: wild soybean (aka glycine soja)
H: lycopersicon chilense (aka solanum chilense)
I: dmsp-degrading marine bacterium ja1
J: agrostis kentrophyllum (aka sporobolus kentrophyllus)
K: plantago maxima
L: jaspis
M: solanum mammosum
N: agropyron drobovii (aka campeiostachys drobovii)
O: sorghum grassy shoot phytoplasma
P: solanum dioicum
Q: barrel medic (aka medicago truncatula)
R: phytocoris salicis
S: soybean thrips jivi-like virus 2
T: field mustard (aka brassica rapa)
U: None of the above. | [E; E; E; E] |
<Instruct>: Given the context 'Their proteinase inhibitor production and volatile emission were used as direct and indirect defence factors to evaluate the responses of leafminers and parasitoids.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [leafminers]
<Options>: A: ribbed apple leaf miner (aka leucoptera malifoliella)
B: pea leafminer (aka liriomyza huidobrensis)
C: leaf bugs (aka miridae)
D: leafcurl plum aphid (aka brachycaudus helichrysi)
E: apple leafminer (aka phyllonorycter pomonella)
F: None of the above. | [B] |
<Instruct>: Given the context 'Here, we show that although spr2 mutant plants are compromised in direct defence against the larval leafminers and in attracting parasitoids, they are less attractive to adult flies compared with WT plants.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [spr2 mutant plants; leafminers; wt plants]
<Options>: A: cabbage leafminer (aka liriomyza brassicae)
B: phytoseiulus persimilis
C: lamachodes
D: sugarcane yellows phytoplasma
E: plantago rapensis
F: leafcurl plum aphid (aka brachycaudus helichrysi)
G: plantago uniglumis
H: tobacco witchweed (aka striga gesnerioides)
I: plantago atrata
J: spartina patens (aka sporobolus pumilus)
K: psyllipsocus ramburii
L: 'triticum aestivum' yellow stunting phytoplasma
M: medicago hybrida (trigonella hybrida) (aka medicago hybrida)
N: pea leafminer (aka liriomyza huidobrensis)
O: lepidodes
P: None of the above. | [P; N; P] |
<Instruct>: Given the context 'Here, we show that although spr2 mutant plants are compromised in direct defence against the larval leafminers and in attracting parasitoids, they are less attractive to adult flies compared with WT plants.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [spr2 mutant plants; leafminers; wt plants]
<Options>: A: celery leafminer (aka liriomyza trifolii)
B: plantago maxima
C: syrah grapevine phytoplasma
D: sorghum grassy shoot phytoplasma
E: plantago atrata
F: pea leafminer (aka liriomyza huidobrensis)
G: leafminer moths (aka gracillariidae)
H: cabbage leaf miner (aka phytomyza rufipes)
I: sugarcane green grassy shoot phytoplasma
J: holly leafminers (aka phytomyza)
K: sugarcane yellows phytoplasma
L: trifolium pratense (peavine clover) (aka trifolium pratense)
M: plantago unibracteata
N: plantago uniglumis
O: plantago sempervirens (plantago cynops l., 1762, non l., 1753) (aka plantago sempervirens)
P: None of the above. | [P; F; P] |
<Instruct>: Given the context 'Here, we show that although spr2 mutant plants are compromised in direct defence against the larval leafminers and in attracting parasitoids, they are less attractive to adult flies compared with WT plants.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [spr2 mutant plants; leafminers; wt plants]
<Options>: A: plantago remota
B: phytophthora mississippiae
C: leafcurl plum aphid (aka brachycaudus helichrysi)
D: tobacco witchweed (aka striga gesnerioides)
E: plantago campestris
F: plantago sempervirens (plantago cynops l., 1762, non l., 1753) (aka plantago sempervirens)
G: sylvia herbicola (aka emberizoides herbicola)
H: liriomyza sativae (vegetable leafminer) (aka liriomyza sativae)
I: lepidodes
J: phytoseiulus persimilis
K: 'solidago microglossa' shoot proliferation phytoplasma
L: 'saccharum officinarum' grassy shoot disease phytoplasma
M: pea leafminer (aka liriomyza huidobrensis)
N: plantago atrata
O: garden pea leafminer (aka chromatomyia horticola)
P: None of the above. | [P; M; P] |
<Instruct>: Given the context 'Moreover, in comparison to other genotypes, the 35S::prosys plant displays greater direct and constitutive indirect defences, but reduced success of parasitism by parasitoids.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [35s::prosys plant]
<Options>: A: phytoptus serbicus
B: screwbean (aka prosopis reptans)
C: sericostachys
D: sugarcane green grassy shoot phytoplasma
E: stachys sericantha
F: None of the above. | [F] |
<Instruct>: Given the context 'Haplotype analysis of the genes encoding glutamine synthetase plastic isoforms and their association with nitrogen-use- and yield-related traits in bread wheat.
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [bread wheat]
<Options>: A: wild emmer wheat (aka triticum dicoccoides)
B: helenium aestivale (aka gaillardia aestivalis)
C: english wheat (aka triticum turgidum)
D: hordeum vulgare (barley) (aka hordeum vulgare)
E: canadian hard winter wheat (aka triticum aestivum)
F: None of the above. | [E] |
<Instruct>: Given the context 'Investigating the haplotype variation of GS genes and its association with agronomic traits may provide useful information for improving wheat N-use efficiency and yield.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [wheat]
<Options>: A: polish wheat (aka triticum polonicum)
B: bread wheat (aka triticum aestivum)
C: wild emmer wheat (aka triticum dicoccoides)
D: one-grained wheat (aka triticum monococcum)
E: triticum tauschii (aka aegilops tauschii)
F: None of the above. | [B] |
<Instruct>: Given the context 'Investigating the haplotype variation of GS genes and its association with agronomic traits may provide useful information for improving wheat N-use efficiency and yield.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [wheat]
<Options>: A: polish wheat (aka triticum polonicum)
B: wild emmer wheat (aka triticum dicoccoides)
C: one-grained wheat (aka triticum monococcum)
D: triticum tauschii (aka aegilops tauschii)
E: None of the above. | [E] |
<Instruct>: Given the context 'We isolated the promoter and coding region sequences of the plastic glutamine synthetase isoform (GS2) genes located on chromosomes 2A, 2B and 2D in bread wheat.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [bread wheat]
<Options>: A: triticum tauschii (aka aegilops tauschii)
B: barley (aka hordeum vulgare)
C: triticum triunciale (aka aegilops triuncialis)
D: helenium aestivale (aka gaillardia aestivalis)
E: canadian hard winter wheat (aka triticum aestivum)
F: None of the above. | [E] |
<Instruct>: Given the context 'Our data suggest that certain TaGS2 haplotypes may be valuable in breeding wheat varieties with improved agronomic performance and N-use efficiency.
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [wheat]
<Options>: A: wild emmer wheat (aka triticum dicoccoides)
B: triticum triunciale (aka aegilops triuncialis)
C: triticum aethiopicum (aka triticum turgidum)
D: triticum aegilops (aka aegilops tauschii)
E: bread wheat (aka triticum aestivum)
F: None of the above. | [E] |
<Instruct>: Given the context 'High homologous gene conservation despite extreme autopolyploid redundancy in sugarcane.
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [sugarcane]
<Options>: A: saccharum japonicum (aka miscanthus sinensis)
B: saccharum spontaneum (wild sugarcane) (aka saccharum spontaneum)
C: sugarcane (aka saccharum hybrid cultivar)
D: saccharum officinarum (noble cane) (aka saccharum officinarum)
E: erianthus giganteus (aka saccharum giganteum)
F: None of the above. | [D] |
<Instruct>: Given the context 'Modern sugarcane (Saccharum spp.) is the leading sugar crop and a primary energy crop.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [sugarcane; saccharum spp.]
<Options>: A: african sugarcane borer (aka eldana saccharina)
B: wild sugarcane (aka saccharum spontaneum)
C: saccharum sp. pk-2011
D: sugar maple (aka acer saccharum)
E: noble cane (aka saccharum officinarum)
F: narenga (aka saccharum)
G: saccharomonospora sp.
H: saccharomycopsis sp.
I: saccharicrinis sp.
J: saccharum sp.
K: None of the above. | [E; J] |
<Instruct>: Given the context 'Modern sugarcane (Saccharum spp.) is the leading sugar crop and a primary energy crop.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [sugarcane; saccharum spp.]
<Options>: A: narenga (aka saccharum)
B: saccharolobus sp.
C: sugarcane (aka saccharum officinarum)
D: indian cane (aka saccharum barberi)
E: saccharum sp.
F: saccharomycotina sp.
G: saccharophagus sp.
H: sugar maple (aka acer saccharum)
I: cultivated sugarcanes (aka saccharum officinarum species complex)
J: sugarcane plumegrass (aka saccharum giganteum)
K: None of the above. | [C; E] |
<Instruct>: Given the context 'It was produced about a century ago through hybridization between two autopolyploid species, namely S. officinarum and S. spontaneum.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [s. officinarum; s. spontaneum]
<Options>: A: solanum fusiforme
B: saitis mutans
C: fodder cane (aka saccharum spontaneum)
D: solanum sousae
E: solanum castaneum
F: saccharum officinarum (noble cane) (aka saccharum officinarum)
G: schinia persimilis (heliothis persimilis) (aka schinia persimilis)
H: solanum symmetricum
I: solanum stenandrum
J: solanum rigidum
K: None of the above. | [F; C] |
<Instruct>: Given the context 'It was produced about a century ago through hybridization between two autopolyploid species, namely S. officinarum and S. spontaneum.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [s. officinarum; s. spontaneum]
<Options>: A: solanum florulentum
B: saitis mutans
C: saccharum spontaneum (wild sugarcane) (aka saccharum spontaneum)
D: solanum unispinum
E: solanum stenandrum
F: sanguisorba officinalis
G: solanum arboreum
H: sugarcane (aka saccharum officinarum)
I: solanum canense
J: solanum symmetricum
K: None of the above. | [H; C] |
<Instruct>: Given the context 'The two recently established genera Apostrombidium Xu et al., 2009 and Varistrombidium Xu et al., 2009 and the analysis of ontogenetic data in Strombidium constrictum, S. montagnesi, S. wilberti, Omegastrombidium elegans, and Paratontonia gracillima necessitated a revision of the hypothesis about the somatic ciliary pattern evolution in oligotrichid ciliates.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [omegastrombidium elegans]
<Options>: A: albosynnema elegans
B: brodiaea elegans
C: omegastrombidium elegans
D: bloxamia elegans
E: leptolobium elegans
F: None of the above. | [C] |
<Instruct>: Given the context 'Nitric oxide participates in cold-responsive phosphosphingolipid formation and gene expression in Arabidopsis thaliana.
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [arabidopsis thaliana]
<Options>: A: plantago triantha
B: arabidopsis (cardaminopsis) (aka arabidopsis)
C: arabis thaliana (aka arabidopsis thaliana)
D: arabidopsis lyrata (cardaminopsis lyrata) (aka arabidopsis lyrata)
E: plantago cynops (aka plantago afra)
F: None of the above. | [C] |
<Instruct>: Given the context 'The participation of NO in the early transduction of the cold signal in Arabidopsis thaliana was investigated.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [arabidopsis thaliana]
<Options>: A: arabidopsis thaliana x arabidopsis lyrata
B: euxoa agricola (noctua agricola) (aka euxoa agricola)
C: agrotis aurulenta (aka euxoa aurulenta)
D: arabis lyrata (aka arabidopsis lyrata)
E: arabidopsis thaliana (mouse-ear cress) (aka arabidopsis thaliana)
F: None of the above. | [E] |
<Instruct>: Given the context 'Moreover, NO accumulation was not observed in H7 plants overexpressing the A. thaliana nonsymbiotic hemoglobin Arabidopsis haemoglobin 1 (AHb1).', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [a. thaliana]
<Options>: A: atrytone mella (aka anatrytone mella)
B: arabidopsis thaliana (mouse-ear cress) (aka arabidopsis thaliana)
C: ammonia arabica
D: agrotis atlantica (aka noctua atlantica)
E: noctua agricola (aka euxoa agricola)
F: None of the above. | [B] |
<Instruct>: Given the context 'Identification of a novel mitochondrial protein, short postembryonic roots 1 (SPR1), involved in root development and iron homeostasis in Oryza sativa.
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [oryza sativa]
<Options>: A: oryza
B: oryzopsis (ricegrass) (aka oryzopsis)
C: australian wild rice (aka oryza meridionalis)
D: red rice (aka oryza sativa)
E: red rice (aka oryza rufipogon)
F: None of the above. | [D] |
<Instruct>: Given the context 'A rice mutant, Oryza sativa short postembryonic roots 1 (Osspr1), has been characterized.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [rice; oryza sativa short postembryonic roots 1; osspr1]
<Options>: A: red rice (aka oryza longistaminata)
B: olivier's shrew virus 1
C: orbilia oligospora narnavirus 1
D: orsa
E: oryza
F: african wild rice (aka oryza barthii)
G: osca
H: sclerotinia sclerotiorum ophiovirus like virus 1
I: african rice (aka oryza glaberrima)
J: red rice (aka oryza sativa)
K: oryza rufipogon (common wild rice) (aka oryza rufipogon)
L: oryzomonas japonica (oryzomonas japonicum) (aka oryzomonas japonica)
M: None of the above. | [J; J; J] |
<Instruct>: Given the context 'A rice mutant, Oryza sativa short postembryonic roots 1 (Osspr1), has been characterized.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [rice; oryza sativa short postembryonic roots 1; osspr1]
<Options>: A: ophiostoma partitivirus 1
B: transfection vector ostir
C: african rice (aka oryza glaberrima)
D: ora
E: oryza
F: oar
G: oryza officinalis
H: australian wild rice (aka oryza meridionalis)
I: oryza sativa subsp. indica (aka oryza sativa indica group)
J: african wild rice (aka oryza barthii)
K: oryza perennis
L: oryza sativa (asian cultivated rice) (aka oryza sativa)
M: indian rice (aka oryza sativa indica group)
N: opuntia viroid 1
O: None of the above. | [L; L; L] |
<Instruct>: Given the context 'A rice mutant, Oryza sativa short postembryonic roots 1 (Osspr1), has been characterized.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [rice; oryza sativa short postembryonic roots 1; osspr1]
<Options>: A: sclerotinia sclerotiorum ophiovirus like virus 1
B: common wild rice (aka oryza rufipogon)
C: oryza sativa aus (aka oryza sativa aus subgroup)
D: red rice (aka oryza rufipogon)
E: oryza perennis
F: ora
G: orbilia oligospora totivirus 1
H: orbilia oligospora narnavirus 1
I: oryza glaberrima (african rice) (aka oryza glaberrima)
J: australian wild rice (aka oryza meridionalis)
K: otostephanos
L: oryza officinalis
M: oryza sativa (asian cultivated rice) (aka oryza sativa)
N: oryzopsis (ricegrass) (aka oryzopsis)
O: None of the above. | [M; M; M] |
<Instruct>: Given the context '* OsSPR1 was identified by map-based cloning.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [osspr1]
<Options>: A: oar
B: opas
C: osca
D: sclerotinia sclerotiorum ophiovirus like virus 1
E: orbilia oligospora narnavirus 1
F: None of the above. | [F] |
<Instruct>: Given the context 'Complementation of the mutant confirmed that OsSPR1 is involved in post-embryonic root elongation and iron homeostasis in rice.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [osspr1]
<Options>: A: sossor
B: osca
C: ocys
D: ora
E: transfection vector ostir
F: None of the above. | [F] |
<Instruct>: Given the context 'OsSPR1 was found to be ubiquitously expressed in various tissues throughout the plant.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [osspr1]
<Options>: A: opas
B: oar
C: ora
D: olivier's shrew virus 1
E: orbilia oligospora totivirus 1
F: None of the above. | [F] |
<Instruct>: Given the context 'Genomic profiling of carbohydrate metabolism in the ectomycorrhizal fungus Tuber melanosporum.
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [tuber melanosporum]
<Options>: A: tuber xanthomonosporum
B: secotium melanosporum (aka agaricus melanosporus)
C: stibaroma melanotoxa
D: triepeolus melanarius
E: perigord truffle (aka tuber melanosporum)
F: None of the above. | [E] |
<Instruct>: Given the context 'In this study, we used information retrieved from the recently sequenced Tuber melanosporum genome, together with transcriptome analysis data and targeted validation experiments, to construct the first genome-wide catalogue of the proteins supporting carbohydrate metabolism in a plant-symbiotic ascomycete.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [tuber melanosporum]
<Options>: A: tuber melanorufum
B: triepeolus melanarius
C: tuber melanoexcavatum
D: perigord truffle (aka tuber melanosporum)
E: tuber melosporum (picoa melospora) (aka tuber melosporum)
F: None of the above. | [D] |
<Instruct>: Given the context 'In this study, we used information retrieved from the recently sequenced Tuber melanosporum genome, together with transcriptome analysis data and targeted validation experiments, to construct the first genome-wide catalogue of the proteins supporting carbohydrate metabolism in a plant-symbiotic ascomycete.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [tuber melanosporum]
<Options>: A: tuber melanoexcavatum
B: tuber melosporum (picoa melospora) (aka tuber melosporum)
C: tuber melanorufum
D: triepeolus melanarius
E: None of the above. | [E] |
<Instruct>: Given the context 'Transcriptional regulation of these pathways in different stages of the T. melanosporum lifecycle was investigated using whole-genome oligoarray expression data together with real-time reverse transcription-polymerase chain reaction analysis of selected genes.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [t. melanosporum]
<Options>: A: tuber melanorufum
B: black truffle (aka tuber melanosporum)
C: penicillium melanosporum
D: secotium melanosporum (aka agaricus melanosporus)
E: trichoderma chlamydosporum
F: None of the above. | [B] |
<Instruct>: Given the context 'These data indicate a high degree of lifecycle stage specialization for particular branches of carbohydrate metabolism in T. melanosporum.
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [t. melanosporum]
<Options>: A: trichoderma glaucum
B: teichospora melanommoides
C: tuber melosporum (picoa melospora) (aka tuber melosporum)
D: trichosporum
E: black truffle (aka tuber melanosporum)
F: None of the above. | [E] |
<Instruct>: Given the context 'Hyphal and cytoskeleton polarization in Tuber melanosporum: a genomic and cellular analysis.
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [tuber melanosporum]
<Options>: A: tuber melosporum (picoa melospora) (aka tuber melosporum)
B: tuber sphaerosporum
C: tuber calosporum
D: perigord truffle (aka tuber melanosporum)
E: tuber polymorphosporum
F: None of the above. | [D] |
<Instruct>: Given the context 'We have explored the Tuber melanosporum genome sequence by searching for homologs of genes known to play crucial roles in the morphogenesis and cell polarity of yeasts and filamentous fungi.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [tuber melanosporum; yeasts]
<Options>: A: saccharomycodes
B: mycoderma cerevisiae (aka saccharomyces cerevisiae)
C: agaricus melanosporus (secotium melanosporum) (aka agaricus melanosporus)
D: french truffle (aka tuber melanosporum)
E: penicillium melanosporum
F: tuber melanorufum
G: torulaspora
H: tuber melosporum (picoa melospora) (aka tuber melosporum)
I: mycophilomyces
J: saccharomyces drosophilarum (aka kluyveromyces lactis)
K: None of the above. | [D; B] |
<Instruct>: Given the context 'We have explored the Tuber melanosporum genome sequence by searching for homologs of genes known to play crucial roles in the morphogenesis and cell polarity of yeasts and filamentous fungi.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [tuber melanosporum; yeasts]
<Options>: A: penicillium melanosporum
B: black truffle (aka tuber melanosporum)
C: saccharomyces drosophilarum (aka kluyveromyces lactis)
D: tuber melanoexcavatum
E: saccharomyces hansenii (aka debaryomyces hansenii)
F: glomus melanosporum
G: stibaroma melanotoxa
H: saccharomyces cerevisiae (saccharomyces cerevisiae (desm.) meyen ex e.c. hansen, 1883) (aka saccharomyces cerevisiae)
I: saccharomyces albicans (aka candida albicans)
J: torulaspora
K: None of the above. | [B; H] |
<Instruct>: Given the context 'A detailed gene annotation has shown that most components of the cell polarity machinery, morphogenesis and cytoskeleton found in yeasts and filamentous fungi are conserved, although the degree of similarity varies from strong to weak.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [yeasts]
<Options>: A: saccharomyces albicans (aka candida albicans)
B: saccharomyces fermentati (aka torulaspora delbrueckii)
C: kluyveromyces
D: saccharomyces italicus (aka saccharomyces cerevisiae)
E: torulaspora
F: None of the above. | [D] |
<Instruct>: Given the context 'The osmosensing signal transduction pathway from Botrytis cinerea regulates cell wall integrity and MAP kinase pathways control melanin biosynthesis with influence of light.
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [botrytis cinerea]
<Options>: A: ballota cinerea (aka roylea cinerea)
B: botryotinia fuckeliana (aka botrytis cinerea)
C: botrytis
D: mycteria cinerea (tantalus cinereus) (aka mycteria cinerea)
E: botrytis ficariarum (aka botryotinia ficariarum)
F: None of the above. | [B] |
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