instruction stringlengths 209 946 | input stringlengths 96 1.45k | response stringlengths 3 12 |
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<Instruct>: Given the context 'The phytosanitary importance of the corn leafhopper, Dalbulus maidis (De Long and Wolcott) (Hemiptera: Cicadellidae) and the planthopper, Delphacodes kuscheli Fennah (Hemiptera: Delphacidae) lies in their ability to transmit phloem-associated plant pathogens, mainly viruses and mollicutes, and to cause considerable mechanical damage to corn plants during feeding and oviposition.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [corn]
<Options>: A: agrococcus
B: maize (aka zea mays subsp. mays)
C: zelus tetracanthus
D: cornus angustata (aka cornus elliptica)
E: zea mays (zea mays var. japonica) (aka zea mays)
F: None of the above. | [E] |
<Instruct>: Given the context 'The present work aims to understand interactions between the entomopathogenic fungus Beauveria bassiana (Balsamao-Crivelli) Vuillemin (Hypocreales: Cordycipitaceae) and bacterial antagonists isolated from the cuticular surface of D. maidis and D. kuscheli.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [beauveria bassiana; d. maidis; d. kuscheli]
<Options>: A: daldinia simulans
B: beauveria oryzae (aka tritirachium oryzae)
C: dichotomaria viridis
D: falklandius kuscheli
E: isopus kuscheli
F: delphacodes kuscheli
G: doloessa viridis
H: bassia blackiana (aka sclerolaena blackiana)
I: beauveria neobassiana
J: diplazium kuoi
K: dunaliella viridis
L: maize leafhopper (aka dalbulus maidis)
M: dorcus koreanus
N: beauveria bassiana (beauveria bassiana var. bassiana) (aka beauveria bassiana)
O: bassia kingiana (aka madhuca kingiana)
P: None of the above. | [N; L; F] |
<Instruct>: Given the context 'The present work aims to understand interactions between the entomopathogenic fungus Beauveria bassiana (Balsamao-Crivelli) Vuillemin (Hypocreales: Cordycipitaceae) and bacterial antagonists isolated from the cuticular surface of D. maidis and D. kuscheli.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [beauveria bassiana; d. maidis; d. kuscheli]
<Options>: A: beauveria bassiana d1-5
B: beauveria sinensis
C: etheophanus kuscheli
D: klapopteryx kuscheli
E: beauveria bassiana bb 9205
F: rhopalosiphum maidis (corn leaf aphid) (aka rhopalosiphum maidis)
G: diaphorus maurus
H: dalyellia viridis (hirudo viridis) (aka dalyellia viridis)
I: beauveria bassiana (beauveria bassiana var. bassiana) (aka beauveria bassiana)
J: falklandius kuscheli
K: delphacodes kuscheli
L: doris krebsii (aka dendrodoris krebsii)
M: maize leafhopper (aka dalbulus maidis)
N: didymella pteridis
O: bassiana
P: None of the above. | [I; M; K] |
<Instruct>: Given the context 'The present work aims to understand interactions between the entomopathogenic fungus Beauveria bassiana (Balsamao-Crivelli) Vuillemin (Hypocreales: Cordycipitaceae) and bacterial antagonists isolated from the cuticular surface of D. maidis and D. kuscheli.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [beauveria bassiana; d. maidis; d. kuscheli]
<Options>: A: bassia blackiana (aka sclerolaena blackiana)
B: beauveria bassiana bb 9205
C: rhopalosiphum maidis (corn leaf aphid) (aka rhopalosiphum maidis)
D: diaphorus maurus
E: hirudo viridis (aka dalyellia viridis)
F: delphacodes kuscheli
G: discoelius zonalis
H: maize leafhopper (aka dalbulus maidis)
I: drosophila kuhao
J: beauveria sinensis
K: beauveria bassiana (beauveria bassiana var. bassiana) (aka beauveria bassiana)
L: dendrolagus dorianus (doria's tree kangaroo) (aka dendrolagus dorianus)
M: dorcus koreanus
N: beauveria majiangensis
O: dichotomaria viridis
P: None of the above. | [K; H; F] |
<Instruct>: Given the context 'A total of 155 bacterial isolates were recovered from the insect's cuticle and tested against B. bassiana.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [b. bassiana]
<Options>: A: bassiana
B: beauveria bassiana d1-5
C: cordyceps bassiana (aka beauveria bassiana)
D: burkholderia diffusa
E: monarda bradburiana
F: None of the above. | [C] |
<Instruct>: Given the context 'Ninety-one out of 155 strains inhibited the growth of B. bassiana.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [b. bassiana]
<Options>: A: beauveria pseudobassiana
B: burkholderia diffusa
C: beauveria oryzae (aka tritirachium oryzae)
D: cordyceps bassiana (aka beauveria bassiana)
E: bassia iranica (aka bassia odontoptera)
F: None of the above. | [D] |
<Instruct>: Given the context 'Bacterial strains isolated from D. maidis were significantly more antagonistic against B. bassiana than those isolates from D. kuscheli.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [d. maidis; b. bassiana; d. kuscheli]
<Options>: A: rhampholeon viridis
B: dunaliella viridis
C: beauveria pseudobassiana
D: beauveria bassiana d1-5
E: delphacodes kuscheli
F: ectemnorhinus kuscheli
G: monarda bradburiana
H: blakistonia bassi
I: isopus kuscheli
J: klapopteryx kuscheli
K: maize leafhopper (aka dalbulus maidis)
L: didymella pteridis
M: beauveria bassiana (beauveria bassiana var. bassiana) (aka beauveria bassiana)
N: dimorphandra dissimilis
O: dendrolagus dorianus (doria's tree kangaroo) (aka dendrolagus dorianus)
P: None of the above. | [K; M; E] |
<Instruct>: Given the context 'Bacterial strains isolated from D. maidis were significantly more antagonistic against B. bassiana than those isolates from D. kuscheli.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [d. maidis; b. bassiana; d. kuscheli]
<Options>: A: beauveria bassiana d1-5
B: monarda bradburiana
C: delosperma nakurense
D: bassia diffusa (aka chenolea diffusa)
E: maize leafhopper (aka dalbulus maidis)
F: didymella pteridis
G: trichogramma maidis
H: ectemnorhinus kuscheli
I: daphne mauritanica
J: burkholderia insecticola (aka caballeronia insecticola)
K: drosophila bromelioides
L: daphnimorpha kudoi (wikstroemia kudoi) (aka daphnimorpha kudoi)
M: spicaria bassiana (aka beauveria bassiana)
N: delphacodes kuscheli
O: dichotomaria viridis
P: None of the above. | [E; M; N] |
<Instruct>: Given the context 'Bacterial strains isolated from D. maidis were significantly more antagonistic against B. bassiana than those isolates from D. kuscheli.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [d. maidis; b. bassiana; d. kuscheli]
<Options>: A: dendrolagus dorianus (doria's tree kangaroo) (aka dendrolagus dorianus)
B: beauveria bassiana var. bassiana (aka beauveria bassiana)
C: lissorhoptrus kuscheli
D: maize leafhopper (aka dalbulus maidis)
E: beauveria pseudobassiana
F: bassiana
G: dacus dissimilis
H: monarda bradburiana
I: rhopalosiphum maidis (corn leaf aphid) (aka rhopalosiphum maidis)
J: isopus kuscheli
K: beauveria bassiana d1-5
L: daldinia simulans
M: etheophanus kuscheli
N: delphacodes kuscheli
O: aphelinus maidis
P: None of the above. | [D; B; N] |
<Instruct>: Given the context 'Among the most effective antagonistic strains, six isolates of Bacillus thuringiensis Berliner (Bacillales: Bacillaeae (after B. subtilis)), one isolate of B. mycoides Flugge, eight isolates of B. megaterium de Bary, five isolates of B.pumilus Meyer and Gottheil, one isolate of B. licheniformis (Weigmann) Chester, and four isolates of B. subtilis (Ehrenberg) Cohn were identified.
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [bacillus thuringiensis; b. subtilis; b. mycoides; b. megaterium]
<Options>: A: bacillus medusa (aka bacillus cereus)
B: bombus festivus
C: bacillus tropicus
D: bacillus thuringiensis lm1212
E: mannheimia bovis
F: bacillus pestis (aka yersinia pestis)
G: bacillus megaterium (aka priestia megaterium)
H: bacillus (aka bacillus <firmicutes>)
I: bacillus mycoides (bacillus mycoides flugge 1886 (approved lists 1980)) (aka bacillus mycoides)
J: bacillus thuringiensis bt18247
K: vibrio subtilis (aka bacillus subtilis)
L: bacillus aerophilus
M: megatherium
N: bacillus mobilis
O: bacillus thuringiensis (bacillus thuringiensis berliner 1915 (approved lists 1980)) (aka bacillus thuringiensis)
P: bacterium phlei (aka mycolicibacterium phlei)
Q: bombella mellum
R: bacillus cereus frankland and frankland 1887 (approved lists 1980) (aka bacillus cereus)
S: megabombus remotus (aka bombus remotus)
T: None of the above. | [O; K; I; G] |
<Instruct>: Given the context 'Among the most effective antagonistic strains, six isolates of Bacillus thuringiensis Berliner (Bacillales: Bacillaeae (after B. subtilis)), one isolate of B. mycoides Flugge, eight isolates of B. megaterium de Bary, five isolates of B.pumilus Meyer and Gottheil, one isolate of B. licheniformis (Weigmann) Chester, and four isolates of B. subtilis (Ehrenberg) Cohn were identified.
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [bacillus thuringiensis; b. subtilis; b. mycoides; b. megaterium]
<Options>: A: bacillus fungorum
B: bacillus thuringiensis (bacillus thuringiensis berliner 1915 (approved lists 1980)) (aka bacillus thuringiensis)
C: sowerbaea subtilis
D: bacillus thuringiensis gv. cytolyticus
E: bacillus megaterium (aka priestia megaterium)
F: bacillus weihenstephanensis (aka bacillus mycoides)
G: burkilliodendron
H: bacillus pestis (aka yersinia pestis)
I: bacterium phlei (aka mycolicibacterium phlei)
J: bacillus thuringiensis fc2
K: graphium megarus (papilio megarus) (aka graphium megarus)
L: bacillus mesentericus (aka bacillus subtilis)
M: bacillus albus
N: borrelomyces peripneumoniae (aka mycoplasma mycoides)
O: gemmobacter megaterium
P: bacillus thuringiensis aks-7
Q: mycoplasma fastidiosum (aka mycoplasmoides fastidiosum)
R: bacillus cytotoxicus (bacillus cytotoxis) (aka bacillus cytotoxicus)
S: sporobolus subtilis
T: aquimarina megaterium
U: None of the above. | [B; L; F; E] |
<Instruct>: Given the context 'Among the most effective antagonistic strains, six isolates of Bacillus thuringiensis Berliner (Bacillales: Bacillaeae (after B. subtilis)), one isolate of B. mycoides Flugge, eight isolates of B. megaterium de Bary, five isolates of B.pumilus Meyer and Gottheil, one isolate of B. licheniformis (Weigmann) Chester, and four isolates of B. subtilis (Ehrenberg) Cohn were identified.
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [bacillus thuringiensis; b. subtilis; b. mycoides; b. megaterium]
<Options>: A: burkillia alba (aka burkilliodendron album)
B: bacillus thuringiensis bt18679
C: bacillus weihenstephanensis (aka bacillus mycoides)
D: fellhanera subtilis (bacidia subtilis) (aka fellhanera subtilis)
E: bacillus (aka bacillus <firmicutes>)
F: bacillus megaterium (aka priestia megaterium)
G: mycoplasmoides
H: mycoplasma mycoides ("microbe de la peripneumonie" nocard and roux 1898) (aka mycoplasma mycoides)
I: bacillus thuringiensis bt407
J: diphthera festiva (bombyx festiva) (aka diphthera festiva)
K: megabombus remotus (aka bombus remotus)
L: gemmobacter megaterium
M: bacillus mesentericus (aka bacillus pumilus)
N: bacillus cereus (bacillus cereus frankland and frankland 1887 (approved lists 1980)) (aka bacillus cereus)
O: bacillus thuringiensis berliner 1915 (approved lists 1980) (aka bacillus thuringiensis)
P: bacillus mesentericus (aka bacillus subtilis)
Q: bacillus tropicus
R: bacillus thuringiensis thuringiensis (aka bacillus thuringiensis serovar thuringiensis)
S: bacillus longisporus ('bacillus longisporus') (aka bacillus longisporus)
T: None of the above. | [O; P; C; F] |
<Instruct>: Given the context 'Among the most effective antagonistic strains, six isolates of Bacillus thuringiensis Berliner (Bacillales: Bacillaeae (after B. subtilis)), one isolate of B. mycoides Flugge, eight isolates of B. megaterium de Bary, five isolates of B.pumilus Meyer and Gottheil, one isolate of B. licheniformis (Weigmann) Chester, and four isolates of B. subtilis (Ehrenberg) Cohn were identified.
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [bacillus thuringiensis; b. subtilis; b. mycoides; b. megaterium]
<Options>: A: bacillus thuringiensis thuringiensis (aka bacillus thuringiensis serovar thuringiensis)
B: bacillus weihenstephanensis (aka bacillus mycoides)
C: bacillus cereus (bacillus cereus frankland and frankland 1887 (approved lists 1980)) (aka bacillus cereus)
D: mycoplasmoides
E: mycoplasma mycoides ("microbe de la peripneumonie" nocard and roux 1898) (aka mycoplasma mycoides)
F: diphthera festiva (bombyx festiva) (aka diphthera festiva)
G: burkillia alba (aka burkilliodendron album)
H: bacillus (aka bacillus <firmicutes>)
I: bacillus mesentericus (aka bacillus pumilus)
J: bacillus thuringiensis bt18679
K: bacillus longisporus ('bacillus longisporus') (aka bacillus longisporus)
L: megabombus remotus (aka bombus remotus)
M: gemmobacter megaterium
N: bacillus mesentericus (aka bacillus subtilis)
O: fellhanera subtilis (bacidia subtilis) (aka fellhanera subtilis)
P: bacillus thuringiensis bt407
Q: bacillus tropicus
R: bacillus thuringiensis berliner 1915 (approved lists 1980) (aka bacillus thuringiensis)
S: None of the above. | [R; N; B; S] |
<Instruct>: Given the context 'Among the most effective antagonistic strains, six isolates of Bacillus thuringiensis Berliner (Bacillales: Bacillaeae (after B. subtilis)), one isolate of B. mycoides Flugge, eight isolates of B. megaterium de Bary, five isolates of B.pumilus Meyer and Gottheil, one isolate of B. licheniformis (Weigmann) Chester, and four isolates of B. subtilis (Ehrenberg) Cohn were identified.
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [bacillus thuringiensis; b. subtilis; b. mycoides; b. megaterium]
<Options>: A: bacillus natto (aka bacillus subtilis)
B: bacillus cereus frankland and frankland 1887 (approved lists 1980) (aka bacillus cereus)
C: bacillus thuringiensis aks-7
D: megatherium
E: sowerbaea subtilis
F: bacillus thuringiensis lm1212
G: bacillus thuringiensis berliner 1915 (approved lists 1980) (aka bacillus thuringiensis)
H: borrelomyces peripneumoniae (aka mycoplasma mycoides)
I: bacillus mesentericus (aka bacillus pumilus)
J: mycoplasmoides fastidiosum (mycoplasma fastidiosum) (aka mycoplasmoides fastidiosum)
K: bacterium phlei (aka mycolicibacterium phlei)
L: priestia megaterium (bacillus megaterium) (aka priestia megaterium)
M: metarhizium globosum
N: bacillus mobilis
O: bombyx festiva (aka diphthera festiva)
P: brachymenium globosum
Q: bacillus thuringiensis thompsoni (aka bacillus thuringiensis serovar thompsoni)
R: bacillus thuringiensis bt407
S: bacillus mycoides flugge 1886 (approved lists 1980) (aka bacillus mycoides)
T: bacillus fungorum
U: None of the above. | [G; A; S; L] |
<Instruct>: Given the context 'Among the most effective antagonistic strains, six isolates of Bacillus thuringiensis Berliner (Bacillales: Bacillaeae (after B. subtilis)), one isolate of B. mycoides Flugge, eight isolates of B. megaterium de Bary, five isolates of B.pumilus Meyer and Gottheil, one isolate of B. licheniformis (Weigmann) Chester, and four isolates of B. subtilis (Ehrenberg) Cohn were identified.
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [b.pumilus; b. licheniformis; b. subtilis]
<Options>: A: vibrio subtilis (aka bacillus subtilis)
B: bacillus mesentericus (aka bacillus pumilus)
C: lichen globosus (aka sphaerophorus globosus)
D: botryocladia pyriformis (chrysymenia pyriformis) (aka botryocladia pyriformis)
E: tabanus pumilus
F: lichen subtilis (aka scytinium subtile)
G: bacillus aerius
H: trollius pumilus
I: bacillus hominis
J: bacillus mobilis
K: bacillus licheniformis (denitrobacillus licheniformis) (aka bacillus licheniformis)
L: bacillus (aka bacillus <walking sticks>)
M: bacillus albus
N: penttilamyces lichenicola (leucogyrophana lichenicola) (aka penttilamyces lichenicola)
O: fellhanera subtilis (bacidia subtilis) (aka fellhanera subtilis)
P: None of the above. | [B; K; A] |
<Instruct>: Given the context 'Among the most effective antagonistic strains, six isolates of Bacillus thuringiensis Berliner (Bacillales: Bacillaeae (after B. subtilis)), one isolate of B. mycoides Flugge, eight isolates of B. megaterium de Bary, five isolates of B.pumilus Meyer and Gottheil, one isolate of B. licheniformis (Weigmann) Chester, and four isolates of B. subtilis (Ehrenberg) Cohn were identified.
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [b.pumilus; b. licheniformis; b. subtilis]
<Options>: A: bacillus hominis
B: conidiobolus lichenicola
C: bacillus amylolyticus (aka paenibacillus amylolyticus)
D: bacillus cereus frankland and frankland 1887 (approved lists 1980) (aka bacillus cereus)
E: bacillus mesentericus (aka bacillus subtilis)
F: xyleborus pumilus (aka debus pumilus)
G: lichen subtilis (aka scytinium subtile)
H: bacillus mobilis
I: pumilus
J: sporobolus subtilis
K: bacillus licheniformis (denitrobacillus licheniformis) (aka bacillus licheniformis)
L: lichen globosus (aka sphaerophorus globosus)
M: botryocladia pyriformis (chrysymenia pyriformis) (aka botryocladia pyriformis)
N: sowerbaea subtilis
O: bacillus mesentericus (aka bacillus pumilus)
P: None of the above. | [O; K; E] |
<Instruct>: Given the context 'Among the most effective antagonistic strains, six isolates of Bacillus thuringiensis Berliner (Bacillales: Bacillaeae (after B. subtilis)), one isolate of B. mycoides Flugge, eight isolates of B. megaterium de Bary, five isolates of B.pumilus Meyer and Gottheil, one isolate of B. licheniformis (Weigmann) Chester, and four isolates of B. subtilis (Ehrenberg) Cohn were identified.
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [b.pumilus; b. licheniformis; b. subtilis]
<Options>: A: bacillus mesentericus (aka bacillus subtilis)
B: sporobolus subtilis
C: lichen globosus (aka sphaerophorus globosus)
D: bacillus mobilis
E: conidiobolus lichenicola
F: xyleborus pumilus (aka debus pumilus)
G: lichen subtilis (aka scytinium subtile)
H: bacillus cereus frankland and frankland 1887 (approved lists 1980) (aka bacillus cereus)
I: sowerbaea subtilis
J: bacillus licheniformis (denitrobacillus licheniformis) (aka bacillus licheniformis)
K: botryocladia pyriformis (chrysymenia pyriformis) (aka botryocladia pyriformis)
L: pumilus
M: bacillus amylolyticus (aka paenibacillus amylolyticus)
N: bacillus hominis
O: None of the above. | [O; J; A] |
<Instruct>: Given the context 'Among the most effective antagonistic strains, six isolates of Bacillus thuringiensis Berliner (Bacillales: Bacillaeae (after B. subtilis)), one isolate of B. mycoides Flugge, eight isolates of B. megaterium de Bary, five isolates of B.pumilus Meyer and Gottheil, one isolate of B. licheniformis (Weigmann) Chester, and four isolates of B. subtilis (Ehrenberg) Cohn were identified.
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [b.pumilus; b. licheniformis; b. subtilis]
<Options>: A: bacillus clarus
B: brassia pumila
C: bacillus cereus (bacillus cereus frankland and frankland 1887 (approved lists 1980)) (aka bacillus cereus)
D: bacillus mobilis
E: aphorma lichenoides
F: bacillus amylolyticus (aka paenibacillus amylolyticus)
G: trollius pumilus
H: lichen amylaceus (aka lecanographa amylacea)
I: botryocladia pyriformis (chrysymenia pyriformis) (aka botryocladia pyriformis)
J: bacillus licheniformis (denitrobacillus licheniformis) (aka bacillus licheniformis)
K: bacillus mesentericus (aka bacillus subtilis)
L: bacillus mesentericus (aka bacillus pumilus)
M: pumilus
N: None of the above. | [L; J; K] |
<Instruct>: Given the context 'The organization of foraging in the fire ant, Solenopsis invicta.
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [solenopsis invicta]
<Options>: A: agrotera ignepicta
B: solenopsis electra
C: lonchoptera impicta
D: solenopsis subterranea
E: red fire ant (aka solenopsis invicta)
F: None of the above. | [E] |
<Instruct>: Given the context 'The experiments and observations in this paper reveal in broad strokes how colonies of the fire ant, Solenopsis invicta Buren (Hymenoptera: Formicidae), allocate their available labor to foraging, how they disperse that force within their territory, and how this force changes with colony size, season and worker age.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [solenopsis invicta; hymenoptera]
<Options>: A: solenopsis geminata (tropical fire ant) (aka solenopsis geminata)
B: bugs (aka hemiptera) (aka hemiptera)
C: philenoptera
D: hymenoptera (hymenopterans) (aka hymenoptera)
E: solenopsis picta
F: hymenopus <mantids> (hymenopus) (aka hymenopus <mantids>)
G: true bugs (aka heteroptera)
H: solenopsora elixiana
I: solenopsis loretana
J: solenopsis invicta (red imported fire ant) (aka solenopsis invicta)
K: None of the above. | [J; K] |
<Instruct>: Given the context 'The experiments and observations in this paper reveal in broad strokes how colonies of the fire ant, Solenopsis invicta Buren (Hymenoptera: Formicidae), allocate their available labor to foraging, how they disperse that force within their territory, and how this force changes with colony size, season and worker age.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [solenopsis invicta; hymenoptera]
<Options>: A: red imported fire ant (aka solenopsis invicta)
B: agrotera ignepicta
C: hymenopus (aka hymenopus <mantids>)
D: solenopsis loretana
E: true bugs (aka heteroptera)
F: solenopsis indagatrix
G: hymenoptera (hymenopterans) (aka hymenoptera)
H: hemiptera (bugs (aka hemiptera))
I: solenopsis picta
J: neoptera
K: None of the above. | [A; K] |
<Instruct>: Given the context 'Pollen preference for Psychotria sp. is not learned in the passion flower butterfly, Heliconius erato.
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [heliconius erato]
<Options>: A: heliconius erato dignus
B: heliconius erato demophoon
C: heliconius erato lativitta
D: heliconius erato notabilis
E: heliconius erato (crimson-patched longwing) (aka heliconius erato)
F: None of the above. | [E] |
<Instruct>: Given the context 'Behavioral experiments using plants preferred by Heliconius erato suggest that pollen preference in H. erato is an innate trait and consequently learning of chemical cues at roosting aggregations is unlikely.
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [heliconius erato; h. erato]
<Options>: A: heliconius hortense
B: heliconius erato hydara
C: heliconius erato emma
D: heliconius erato venus
E: heliconius erato dignus
F: papilio erato (aka heliconius erato)
G: helictotrichon hideoi
H: heliconius erato lativitta
I: None of the above. | [F; F] |
<Instruct>: Given the context 'Behavioral experiments using plants preferred by Heliconius erato suggest that pollen preference in H. erato is an innate trait and consequently learning of chemical cues at roosting aggregations is unlikely.
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [heliconius erato; h. erato]
<Options>: A: heliconius hortense
B: eratoena
C: heliconius erato etylus
D: heliconius erato emma
E: erato <gastropods> (erato) (aka erato <gastropods>)
F: heliconius erato erato
G: heliconius eratosignis eratosignis
H: heliconius erato venus
I: papilio erato (aka heliconius erato)
J: None of the above. | [I; I] |
<Instruct>: Given the context 'Physiological and molecular evidence that environmental changes elicit morphological interconversion in the model diatom Phaeodactylum tricornutum.
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [phaeodactylum tricornutum]
<Options>: A: pseudocorythion acutum
B: phaeodactylum tricornutum (nitzschia closterium f. minutissima) (aka phaeodactylum tricornutum)
C: pharyngora orientalis (aka prodistomum orientale)
D: phasianella tenuis (aka tricolia tenuis)
E: phaeodactylum tricornutum ccap 1055/1
F: None of the above. | [B] |
<Instruct>: Given the context 'Over the last decades Phaeodactylum tricornutum has become a model to study diatom biology at the molecular level.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [phaeodactylum tricornutum]
<Options>: A: sinopotamon acutum (aka longpotamon acutum)
B: corophium acutum (aka apocorophium acutum)
C: phaeoseptum thailandicum
D: phaedon brassicae (daikon leaf beetle) (aka phaedon brassicae)
E: phaeodactylum tricornutum (nitzschia closterium f. minutissima) (aka phaeodactylum tricornutum)
F: None of the above. | [E] |
<Instruct>: Given the context 'Our aim was to quantify the effect of growth conditions on cell morphology of different P. tricornutum strains by quantitative microscopy, cellular imaging, and non-targeted transcriptomics.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [p. tricornutum]
<Options>: A: galium tricornutum
B: phaeodactylum tricornutum ccap 1055/1
C: penicillium tricolor
D: delphinium tricorne
E: phaeodactylum tricornutum (nitzschia closterium f. minutissima) (aka phaeodactylum tricornutum)
F: None of the above. | [E] |
<Instruct>: Given the context 'This work contributes to better understand the importance of the unique capability of morphotype conversion in P. tricornutum and its relevance in acclimation to changing environmental conditions.
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [p. tricornutum]
<Options>: A: phaeoseptum thailandicum
B: galium tricornutum
C: phaeodactylum tricornutum (nitzschia closterium f. minutissima) (aka phaeodactylum tricornutum)
D: phaseolus macrolepis
E: phaseolus gladiolatus
F: None of the above. | [C] |
<Instruct>: Given the context 'To more confidently assess phylogenetic relationships among astome ciliates, we obtained small subunit (SSU) rRNA sequences from nine species distributed in six genera and three families: Almophrya bivacuolata, Eudrilophrya complanata, Metaracoelophrya sp. 1, Metaracoelophrya sp. 2, Metaracoelophrya intermedia, Metaradiophrya sp., Njinella prolifera, Paraclausilocola constricta n. gen., n. sp., and Paraclausilocola elongata n. sp. The two new species in the proposed new clausilocolid genus Paraclausilocola n. gen. are astomes with no attachment apparatus, two files of contractile vacuoles, and an arc-like anterior suture that has differentiations of thigmotactic ciliature on the anterior ends of the left kineties of the upper surface.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [almophrya bivacuolata; eudrilophrya complanata; metaracoelophrya intermedia; njinella prolifera]
<Options>: A: njinella prolifera
B: eudrilophrya complanata
C: dictyopteris prolifera
D: anaxarcha intermedia
E: nymphaea prolifera
F: passiflora complanata
G: almophrya bivacuolata
H: phalaena complana (aka eilema complana)
I: graminella nigrinota
J: entomobrya intermedia
K: mesophoyx intermedia (aka ardea intermedia)
L: thordisa bimaculata
M: anthophora bimaculata
N: arganthomyza bivittata
O: parabotia bimaculata
P: metaracoelophrya intermedia
Q: eurycope complanata
R: amemboa intermedia
S: eremophila complanata
T: radula prolifera
U: None of the above. | [G; B; P; A] |
<Instruct>: Given the context 'To more confidently assess phylogenetic relationships among astome ciliates, we obtained small subunit (SSU) rRNA sequences from nine species distributed in six genera and three families: Almophrya bivacuolata, Eudrilophrya complanata, Metaracoelophrya sp. 1, Metaracoelophrya sp. 2, Metaracoelophrya intermedia, Metaradiophrya sp., Njinella prolifera, Paraclausilocola constricta n. gen., n. sp., and Paraclausilocola elongata n. sp. The two new species in the proposed new clausilocolid genus Paraclausilocola n. gen. are astomes with no attachment apparatus, two files of contractile vacuoles, and an arc-like anterior suture that has differentiations of thigmotactic ciliature on the anterior ends of the left kineties of the upper surface.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [almophrya bivacuolata; eudrilophrya complanata; metaracoelophrya intermedia; njinella prolifera]
<Options>: A: eudrilophrya complanata
B: njinella prolifera
C: passiflora complanata
D: woodwardia prolifera
E: almophrya bivacuolata
F: leiothrix prolifera (eriocaulon proliferum) (aka leiothrix prolifera)
G: sphaeria complanata (aka calophoma complanata)
H: minuartia intermedia
I: aleochara bimaculata
J: phlegmariurus proliferus (huperzia prolifera) (aka phlegmariurus proliferus)
K: metaracoelophrya intermedia
L: lepidodermella intermedia
M: yushania complanata
N: nassa complanata (aka phrontis complanata)
O: navarretia prolifera
P: anthophora bimaculata
Q: anaxarcha intermedia
R: lankesterella bivacuolata
S: atya intermedia
T: phrynovelia bimaculata
U: None of the above. | [E; A; K; B] |
<Instruct>: Given the context 'To more confidently assess phylogenetic relationships among astome ciliates, we obtained small subunit (SSU) rRNA sequences from nine species distributed in six genera and three families: Almophrya bivacuolata, Eudrilophrya complanata, Metaracoelophrya sp. 1, Metaracoelophrya sp. 2, Metaracoelophrya intermedia, Metaradiophrya sp., Njinella prolifera, Paraclausilocola constricta n. gen., n. sp., and Paraclausilocola elongata n. sp. The two new species in the proposed new clausilocolid genus Paraclausilocola n. gen. are astomes with no attachment apparatus, two files of contractile vacuoles, and an arc-like anterior suture that has differentiations of thigmotactic ciliature on the anterior ends of the left kineties of the upper surface.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [almophrya bivacuolata; eudrilophrya complanata; metaracoelophrya intermedia; njinella prolifera]
<Options>: A: eurychorda complanata
B: jania prolifera (aka cheilosporum proliferum)
C: brachytarsophrys intermedia (aka megophrys intermedia)
D: cymatodera intermedia
E: almophrya bivacuolata
F: millepora complanata
G: atya intermedia
H: anthophora bimaculata
I: dictyopteris prolifera
J: sphaeria complanata (aka calophoma complanata)
K: eurythoe complanata (aphrodita complanata) (aka eurythoe complanata)
L: lepidodermella intermedia
M: graminella ampla
N: metaracoelophrya intermedia
O: lankesterella bivacuolata
P: eudrilophrya complanata
Q: actinobolina bivacuolata
R: melliniella micrantha
S: graminella nigrinota
T: njinella prolifera
U: None of the above. | [E; P; N; T] |
<Instruct>: Given the context 'To more confidently assess phylogenetic relationships among astome ciliates, we obtained small subunit (SSU) rRNA sequences from nine species distributed in six genera and three families: Almophrya bivacuolata, Eudrilophrya complanata, Metaracoelophrya sp. 1, Metaracoelophrya sp. 2, Metaracoelophrya intermedia, Metaradiophrya sp., Njinella prolifera, Paraclausilocola constricta n. gen., n. sp., and Paraclausilocola elongata n. sp. The two new species in the proposed new clausilocolid genus Paraclausilocola n. gen. are astomes with no attachment apparatus, two files of contractile vacuoles, and an arc-like anterior suture that has differentiations of thigmotactic ciliature on the anterior ends of the left kineties of the upper surface.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [almophrya bivacuolata; eudrilophrya complanata; metaracoelophrya intermedia; njinella prolifera]
<Options>: A: aquimarina intermedia
B: anthophora bimaculata
C: pandeopsis prolifera
D: eurythoe complanata (aphrodita complanata) (aka eurythoe complanata)
E: bothrogonia macromaculata
F: amemboa intermedia
G: almophrya bivacuolata
H: achlya prolifera
I: trentepohlia prolifera
J: njinella prolifera
K: eurychorda complanata
L: eudrilophrya complanata
M: agroiconota bivittata
N: xyris complanata
O: spatalla prolifera
P: hybomitra bimaculata
Q: physostegia intermedia
R: metaracoelophrya intermedia
S: ennealophus euryandrus (herbertia euryandra) (aka ennealophus euryandrus)
T: cymatodera intermedia
U: None of the above. | [G; L; R; J] |
<Instruct>: Given the context 'To more confidently assess phylogenetic relationships among astome ciliates, we obtained small subunit (SSU) rRNA sequences from nine species distributed in six genera and three families: Almophrya bivacuolata, Eudrilophrya complanata, Metaracoelophrya sp. 1, Metaracoelophrya sp. 2, Metaracoelophrya intermedia, Metaradiophrya sp., Njinella prolifera, Paraclausilocola constricta n. gen., n. sp., and Paraclausilocola elongata n. sp. The two new species in the proposed new clausilocolid genus Paraclausilocola n. gen. are astomes with no attachment apparatus, two files of contractile vacuoles, and an arc-like anterior suture that has differentiations of thigmotactic ciliature on the anterior ends of the left kineties of the upper surface.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [paraclausilocola constricta n. gen., n. sp.; paraclausilocola elongata n. sp.]
<Options>: A: colispora elongata
B: paraclausilocola constricta
C: paraclausilocola elongata
D: lourea constricta (aka christia constricta)
E: phytophthora constricta
F: phylica constricta
G: paracercomonas elongata
H: paullinia elongata
I: pyramidospora constricta
J: pseudanodonta elongata
K: None of the above. | [B; C] |
<Instruct>: Given the context 'To more confidently assess phylogenetic relationships among astome ciliates, we obtained small subunit (SSU) rRNA sequences from nine species distributed in six genera and three families: Almophrya bivacuolata, Eudrilophrya complanata, Metaracoelophrya sp. 1, Metaracoelophrya sp. 2, Metaracoelophrya intermedia, Metaradiophrya sp., Njinella prolifera, Paraclausilocola constricta n. gen., n. sp., and Paraclausilocola elongata n. sp. The two new species in the proposed new clausilocolid genus Paraclausilocola n. gen. are astomes with no attachment apparatus, two files of contractile vacuoles, and an arc-like anterior suture that has differentiations of thigmotactic ciliature on the anterior ends of the left kineties of the upper surface.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [paraclausilocola constricta n. gen., n. sp.; paraclausilocola elongata n. sp.]
<Options>: A: chloridiopsis constrictospora (chloridium constrictospora) (aka chloridiopsis constrictospora)
B: discoplastis constricta (lepocinclis constricta) (aka discoplastis constricta)
C: phyllostoma elongatum (aka phyllostomus elongatus)
D: cryptoprymna elongata
E: stipa constricta (aka pseudoeriocoma constricta)
F: pertusaria constricta
G: paraclausilocola elongata
H: nyctiophylax elongatus
I: paraclausilocola constricta
J: pseudanodonta elongata
K: None of the above. | [I; G] |
<Instruct>: Given the context 'Non-structural protein 1 (NS1) antibody-based assays to differentiate West Nile (WN) virus from Japanese encephalitis virus infections in horses: effects of WN virus NS1 antibodies induced by inactivated WN vaccine.
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [west nile; wn virus]
<Options>: A: towan virus
B: wnv (aka west nile virus) (aka west nile virus)
C: west nile virus 2 (west nile virus lineage 2) (aka west nile virus 2)
D: noveria virus
E: equine influenza virus
F: western equine encephalomyelitis virus (aka western equine encephalitis virus)
G: west nile virus strain pt6.5
H: west nile virus - kunjin (aka kunjin virus)
I: west accra virus
J: None of the above. | [B; B] |
<Instruct>: Given the context 'Non-structural protein 1 (NS1) antibody-based assays to differentiate West Nile (WN) virus from Japanese encephalitis virus infections in horses: effects of WN virus NS1 antibodies induced by inactivated WN vaccine.
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [west nile; wn virus]
<Options>: A: nai virus
B: wetland virus
C: witsand virus
D: west nile virus strain pt6.5
E: west accra virus
F: wenzhou orthonairovirus (aka orthonairovirus wenzhouense)
G: noveria virus
H: wnv (aka west nile virus) (aka west nile virus)
I: swine influenza virus
J: None of the above. | [H; H] |
<Instruct>: Given the context 'Antibodies to non-structural protein 1 (NS1) of West Nile virus (WNV) have been used to differentiate WNV infection from infection by serologically cross-reactive flaviviruses, including Japanese encephalitis virus (JEV), in horses.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [japanese encephalitis virus]
<Options>: A: japanese encephalitis virus (japanese encephalitis (je) virus) (aka japanese encephalitis virus)
B: japanese encephalitis virus (strain jaoars982) (aka japanese encephalitis virus strain jaoars982)
C: japanese encephalitis virus strain sa(v) (japanese encephalitis virus (strain sa(v))) (aka japanese encephalitis virus strain sa(v))
D: jeju virus
E: japanese encephalitis virus strain m28 (japanese encephalitis virus (strain m28)) (aka japanese encephalitis virus strain m28)
F: None of the above. | [A] |
<Instruct>: Given the context 'However, since the inactivated West Nile (WN) vaccine has been reported to induce NS1 antibodies, there is concern about the reliability of using NS1-based assays for testing vaccinated horses.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [wn]
<Options>: A: west nile virus (wnv (aka west nile virus))
B: west virginia white (aka pieris virginiensis)
C: wilmottia koreana
D: wilnyevirus
E: wittmeridecus insularis
F: None of the above. | [A] |
<Instruct>: Given the context 'Therefore, the effect of inactivated WN vaccine-induced antibodies on an epitope-blocking ELISA and complement-dependent cytotoxicity (CDC) assay were investigated.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [wn]
<Options>: A: wahnesia
B: aedes w-albus (stegomyia w-alba) (aka aedes w-albus)
C: wawi
D: white seabream nervous necrosis virus
E: west nile virus (wnv (aka west nile virus))
F: None of the above. | [E] |
<Instruct>: Given the context 'Both assays are based on NS1 antibodies and were established previously to differentiate WNV from JEV infections in horses.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [wnv]
<Options>: A: northway virus
B: west nile virus (wnv (aka west nile virus))
C: noveria virus
D: nova hantavirus (aka nova virus)
E: de nodal virus
F: None of the above. | [B] |
<Instruct>: Given the context 'Vaccine-induced NS1 antibodies were also detected by blocking ELISA and a CDC assay and affected the ability of these assays to differentiate WNV from JEV infections.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [wnv; jev]
<Options>: A: japanese encephalitis virus je (aka japanese encephalitis virus)
B: kupe virus
C: noveria virus
D: denalis virus
E: letea virus
F: wnv (aka west nile virus) (aka west nile virus)
G: yezo virus
H: de nodal virus
I: chize virus
J: powassan virus (flavivirus powassan) (aka powassan virus)
K: None of the above. | [F; A] |
<Instruct>: Given the context 'Vaccine-induced NS1 antibodies were also detected by blocking ELISA and a CDC assay and affected the ability of these assays to differentiate WNV from JEV infections.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [wnv; jev]
<Options>: A: japanese encephalitis virus jev (aka japanese encephalitis virus)
B: zika virus (zikv (aka zika virus))
C: mosquito flavivirus
D: wnv (aka west nile virus) (aka west nile virus)
E: kundal virus
F: denalis virus
G: kenkeme virus
H: dengue virus
I: yezo virus
J: denwin virus
K: None of the above. | [D; A] |
<Instruct>: Given the context 'An Antarctic hypotrichous ciliate, Parasterkiella thompsoni (Foissner) nov. gen., nov. comb., recorded in Argentinean peat-bogs: morphology, morphogenesis, and molecular phylogeny.
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [parasterkiella thompsoni]
<Options>: A: sterkiella thompsoni (aka parasterkiella thompsoni)
B: aliatypus thompsoni
C: lydella thompsoni
D: rhopalopselion thompsoni
E: pyrgulopsis thompsoni
F: None of the above. | [A] |
<Instruct>: Given the context 'An Antarctic hypotrichous ciliate, Parasterkiella thompsoni (Foissner) nov. gen., nov. comb., recorded in Argentinean peat-bogs: morphology, morphogenesis, and molecular phylogeny.
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [parasterkiella thompsoni]
<Options>: A: pyrgulopsis thompsoni
B: rhopalopselion thompsoni
C: aliatypus thompsoni
D: lydella thompsoni
E: None of the above. | [E] |
<Instruct>: Given the context 'The ciliate Parasterkiella thompsoni (Foissner, 1996)', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [parasterkiella thompsoni]
<Options>: A: polyrhachis thompsoni
B: sterkiella thompsoni (aka parasterkiella thompsoni)
C: leiabbottella thompsoni (aka preclaripoma thompsoni)
D: streptocarpus thompsonii
E: tenthredo thompsoni
F: None of the above. | [B] |
<Instruct>: Given the context 'Phylogenetic analyses consistently placed P. thompsoni within the stylonychines.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [p. thompsoni]
<Options>: A: pycnosorus thompsonianus
B: rhopalopselion thompsoni
C: sterkiella thompsoni (aka parasterkiella thompsoni)
D: perkinsiella thompsoni
E: plasmopara sii
F: None of the above. | [C] |
<Instruct>: Given the context 'New data on the morphogenesis of the dorsal ciliature justifies the transference of Sterkiella thompsoni to a new genus Parasterkiella.
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [sterkiella thompsoni]
<Options>: A: sterkiella thompsoni (aka parasterkiella thompsoni)
B: kallymenia thompsonii
C: acanthurus thompsoni (thompson's surgeonfish) (aka acanthurus thompsoni)
D: colpodaspis thompsoni
E: perkinsiella thompsoni
F: None of the above. | [A] |
<Instruct>: Given the context 'Here, the novel orf virus (ORFV)-encoded protein ORFV002 was shown to inhibit nuclear events regulating NF-kappaB transcriptional activity.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [orf virus; orfv]
<Options>: A: goatpox virus
B: elephantpox virus
C: contagious pustular dermatitis virus (aka orf virus)
D: human orf virus
E: ovine nidovirus
F: ovine pestivirus
G: okola virus
H: orf virus ov/c2
I: None of the above. | [C; C] |
<Instruct>: Given the context 'Here, the novel orf virus (ORFV)-encoded protein ORFV002 was shown to inhibit nuclear events regulating NF-kappaB transcriptional activity.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [orf virus; orfv]
<Options>: A: swinepox virus
B: contagious pustular dermatitis virus (aka orf virus)
C: ovine enzootic nasal tumour virus (aka ovine enzootic nasal tumor virus)
D: human orf virus
E: ripawon virus
F: ripader virus
G: goatpox virus
H: ovine pestivirus
I: omono river virus
J: None of the above. | [B; B] |
<Instruct>: Given the context 'The roles played by Aspergillus nidulans apoptosis-inducing factor (AIF)-like mitochondrial oxidoreductase (AifA) and NADH-ubiquinone oxidoreductases (NdeA-B and NdiA) in farnesol resistance.
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [aspergillus nidulans]
<Options>: A: aspergillus lanosus
B: aspergillus nidulans (eidam) g. winter, 1884 (aka aspergillus nidulans)
C: aspergillus cerealis
D: aspergillus neoellipticus (aka aspergillus fumigatus)
E: aspergillus oryzae (aspergillus oryzae (ahlb.) cohn, 1884) (aka aspergillus oryzae)
F: None of the above. | [B] |
<Instruct>: Given the context 'Here, we show that Aspergillus nidulans AifA encoding the apoptosis-inducing factor (AIF)-like mitochondrial oxidoreductase plays a role in the function of the mitochondrial Complex I. Additionally, we demonstrated that ndeA-B and ndiA encode external and internal alternative NADH dehydrogenases, respectively, that have a function in FOH resistance.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [aspergillus nidulans]
<Options>: A: aspergillus agricola
B: aspergillus avenaceus
C: aspergillus tritici (aka aspergillus neotritici)
D: aspergillus nidulellus (aka aspergillus nidulans)
E: aphanothece nidulans
F: None of the above. | [D] |
<Instruct>: Given the context 'From a number of different Aspergillus terreus controlled batch fermentations, those cultures with the largest difference in itaconic acid titer and productivity were selected for mRNA isolation.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [aspergillus terreus]
<Options>: A: aspergillus niveus
B: aspergillus europaeus
C: aspergillus nidulellus (aka aspergillus nidulans)
D: aspergillus terreus (aspergillus terrestris) (aka aspergillus terreus)
E: aspergillus lacticoffeatus (aka aspergillus niger)
F: None of the above. | [D] |
<Instruct>: Given the context 'From a number of different Aspergillus terreus controlled batch fermentations, those cultures with the largest difference in itaconic acid titer and productivity were selected for mRNA isolation.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [aspergillus terreus]
<Options>: A: aspergillus lacticoffeatus (aka aspergillus niger)
B: aspergillus nidulellus (aka aspergillus nidulans)
C: aspergillus niveus
D: aspergillus europaeus
E: None of the above. | [E] |
<Instruct>: Given the context 'Expression of this gene in Aspergillus niger, which is a natural citric acid producer, resulted in itaconate production.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [aspergillus niger]
<Options>: A: aspergillus lacticoffeatus (aka aspergillus niger)
B: yunnanilus niger
C: amauroascus niger
D: aspergillus lanosus
E: aspergillus asperus (aka aspergillus asper)
F: None of the above. | [A] |
<Instruct>: Given the context 'Genome analysis suggests that in A. terreus the cis-aconitate decarboxylase gene is part of an itaconate acid related gene cluster including genes encoding two pathway specific transporters and a Zinc finger protein.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [a. terreus]
<Options>: A: aradus avenius (aka aneurus avenius)
B: aspergillus avenaceus
C: aspergillus terrestris (aka aspergillus terreus)
D: amalaraeus
E: aspergillus aerius
F: None of the above. | [C] |
<Instruct>: Given the context 'Brief exposures of human body lice to sublethal amounts of ivermectin over-transcribes detoxification genes involved in tolerance.
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [human body lice]
<Options>: A: body lice (aka pediculus humanus)
B: guinea pig lice (aka gyropidae)
C: body lice (aka pediculidae)
D: chewing lice (aka amblycera)
E: human body louse (aka pediculus humanus corporis)
F: None of the above. | [A] |
<Instruct>: Given the context '[~lethal concentration 90% (LC(90)) in 2-4 h]}, showed that ivermectin-induced detoxification genes from body lice are identified by quantitative real-time PCR analyses.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [body lice]
<Options>: A: sucking lice (aka anoplura)
B: head lice (aka pediculus humanus)
C: pediculus ovis (aka bovicola ovis)
D: chewing lice (aka amblycera)
E: pediculus
F: None of the above. | [B] |
<Instruct>: Given the context 'B cells are one of the targets of Friend virus (FV) infection, a well-established mouse model often used to study retroviral infections in vivo.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [retroviral]
<Options>: A: unidentified retrovirus (retrovirus) (aka unidentified retrovirus)
B: replication competent viruses
C: retroviral provirus
D: human betaretrovirus
E: vir
F: None of the above. | [A] |
<Instruct>: Given the context 'Furthermore, we demonstrate that complement opsonization of Friend murine leukemia virus (F-MuLV) enhances infection of B cells, which correlates with increased potency of B cells to activate FV-specific CD8(+) T cells.
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [murine leukemia virus (f-mulv)]
<Options>: A: xenotropic murine leukemia virus-related virus (aka xenotropic mulv-related virus)
B: mlv (aka murine leukemia virus) (aka murine leukemia virus)
C: mus hortulanus virus (aka homulv murine leukemia virus)
D: ecotropic murine leukemia virus
E: murine leukemia-related retroviruses
F: None of the above. | [B] |
<Instruct>: Given the context 'Alphacoronavirus transmissible gastroenteritis virus nsp1 protein suppresses protein translation in mammalian cells and in cell-free HeLa cell extracts but not in rabbit reticulocyte lysate.
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [transmissible gastroenteritis virus; rabbit]
<Options>: A: porcine epidemic diarrhea virus (pedv (aka porcine epidemic diarrhea virus))
B: riverine rabbit (aka bunolagus monticularis)
C: porcine transmissible gastroenteritis virus (aka transmissible gastroenteritis virus)
D: oryctolagus cuniculus cuniculus (lepus cuniculus cuniculus) (aka oryctolagus cuniculus cuniculus)
E: trtv (aka turkey rhinotracheitis virus) (aka turkey rhinotracheitis virus)
F: thv (aka turkey hepatitis virus) (aka turkey hepatitis virus)
G: turkey picornavirus
H: greater red rock rabbit (aka pronolagus crassicaudatus)
I: european rabbit (aka oryctolagus cuniculus)
J: pygmy rabbit (aka brachylagus idahoensis)
K: None of the above. | [K; I] |
<Instruct>: Given the context 'Alphacoronavirus transmissible gastroenteritis virus nsp1 protein suppresses protein translation in mammalian cells and in cell-free HeLa cell extracts but not in rabbit reticulocyte lysate.
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [transmissible gastroenteritis virus; rabbit]
<Options>: A: marsh rabbit (aka sylvilagus palustris)
B: turkey picornavirus
C: turkey rhinotracheitis virus trtv (aka turkey rhinotracheitis virus)
D: veev (aka venezuelan equine encephalitis virus) (aka venezuelan equine encephalitis virus)
E: european rabbit (aka oryctolagus cuniculus)
F: pedv (aka porcine epidemic diarrhea virus) (aka porcine epidemic diarrhea virus)
G: turkey enteric coronavirus (aka turkey coronavirus)
H: pygmy rabbit (aka brachylagus idahoensis)
I: riverine rabbit (aka bunolagus monticularis)
J: desert hare (aka lepus tibetanus)
K: None of the above. | [K; E] |
<Instruct>: Given the context 'Alphacoronavirus transmissible gastroenteritis virus nsp1 protein suppresses protein translation in mammalian cells and in cell-free HeLa cell extracts but not in rabbit reticulocyte lysate.
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [transmissible gastroenteritis virus; rabbit]
<Options>: A: turkey picornavirus
B: riverine rabbit (aka bunolagus monticularis)
C: turkey enteric coronavirus (aka turkey coronavirus)
D: pygmy rabbit (aka brachylagus idahoensis)
E: marsh rabbit (aka sylvilagus palustris)
F: veev (aka venezuelan equine encephalitis virus) (aka venezuelan equine encephalitis virus)
G: desert hare (aka lepus tibetanus)
H: turkey rhinotracheitis virus trtv (aka turkey rhinotracheitis virus)
I: pedv (aka porcine epidemic diarrhea virus) (aka porcine epidemic diarrhea virus)
J: None of the above. | [J; J] |
<Instruct>: Given the context 'The nsp1 protein of transmissible gastroenteritis virus (TGEV), an alphacoronavirus, efficiently suppressed protein synthesis in mammalian cells.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [transmissible gastroenteritis virus; tgev]
<Options>: A: turkey gallivirus
B: trtv (aka turkey rhinotracheitis virus) (aka turkey rhinotracheitis virus)
C: venezuelan equine encephalomyelitis virus (aka venezuelan equine encephalitis virus)
D: tataguine virus
E: tgev (aka transmissible gastroenteritis virus) (aka transmissible gastroenteritis virus)
F: thv (aka turkey hepatitis virus) (aka turkey hepatitis virus)
G: tgev miller m60 (transmissible gastroenteritis virus miller m60) (aka tgev miller m60)
H: porcine transmissible gastroenteritis virus (aka transmissible gastroenteritis virus)
I: turkey picornavirus
J: taggert virus
K: None of the above. | [K; K] |
<Instruct>: Given the context 'The nsp1 protein of transmissible gastroenteritis virus (TGEV), an alphacoronavirus, efficiently suppressed protein synthesis in mammalian cells.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [transmissible gastroenteritis virus; tgev]
<Options>: A: turkey coronavirus (turkey enteric coronavirus) (aka turkey coronavirus)
B: turkey rhinotracheitis virus trtv (aka turkey rhinotracheitis virus)
C: tete virus (aka orthobunyavirus teteense)
D: veev (aka venezuelan equine encephalitis virus) (aka venezuelan equine encephalitis virus)
E: turkey meningoencephalitis virus
F: transmissible gastroenteritis virus tgev (aka transmissible gastroenteritis virus)
G: venezuelan equine encephalomyelitis virus (aka venezuelan equine encephalitis virus)
H: tataguine virus
I: turkey hepatitis virus (thv (aka turkey hepatitis virus))
J: turkish sheep encephalitis virus (tsev (aka turkish sheep encephalitis virus))
K: None of the above. | [K; K] |
<Instruct>: Given the context 'Unlike the nsp1 protein of severe acute respiratory syndrome coronavirus, a betacoronavirus, the TGEV nsp1 protein was unable to bind 40S ribosomal subunits or promote host mRNA degradation.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [severe acute respiratory syndrome coronavirus; tgev]
<Options>: A: sars-related bat coronavirus (aka bat sars-like coronavirus)
B: tete virus (aka orthobunyavirus teteense)
C: sars-related coronavirus (aka severe acute respiratory syndrome-related coronavirus)
D: sars bat coronavirus (bat sars coronavirus) (aka sars bat coronavirus)
E: tgev miller m60 (transmissible gastroenteritis virus miller m60) (aka tgev miller m60)
F: tataguine virus
G: taggert virus
H: sars coronavirus (aka severe acute respiratory syndrome coronavirus)
I: venezuelan equine encephalomyelitis virus (aka venezuelan equine encephalitis virus)
J: sars2 (aka severe acute respiratory syndrome coronavirus 2)
K: None of the above. | [C; K] |
<Instruct>: Given the context 'Unlike the nsp1 protein of severe acute respiratory syndrome coronavirus, a betacoronavirus, the TGEV nsp1 protein was unable to bind 40S ribosomal subunits or promote host mRNA degradation.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [severe acute respiratory syndrome coronavirus; tgev]
<Options>: A: sars (aka severe acute respiratory syndrome-related coronavirus) (aka severe acute respiratory syndrome-related coronavirus)
B: sars coronavirus as
C: tgev spike protein expression construct
D: swine acute diarrhea syndrome coronavirus
E: transmissible gastroenteritis virus miller m6 (aka tgev miller m6)
F: transmissible gastroenteritis virus tgev (aka transmissible gastroenteritis virus)
G: tgev miller m60 (transmissible gastroenteritis virus miller m60) (aka tgev miller m60)
H: sars-related bat coronavirus (aka bat sars-like coronavirus)
I: taggert virus
J: sars coronavirus (aka severe acute respiratory syndrome coronavirus)
K: None of the above. | [A; K] |
<Instruct>: Given the context 'TGEV nsp1 also suppressed protein translation in cell-free HeLa cell extract; however, it did not affect translation in rabbit reticulocyte lysate (RRL).', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [tgev; rabbit]
<Options>: A: scrub hare (aka lepus saxatilis)
B: grange virus
C: transmissible gastroenteritis virus tgev (aka transmissible gastroenteritis virus)
D: tgev miller m60 (transmissible gastroenteritis virus miller m60) (aka tgev miller m60)
E: transmissible gastroenteritis virus miller m6 (aka tgev miller m6)
F: lepus cuniculus cuniculus (aka oryctolagus cuniculus cuniculus)
G: lepus cuniculus (aka oryctolagus cuniculus)
H: riverine rabbit (aka bunolagus monticularis)
I: taggert virus
J: sylvilagus palustris (lepus palustris) (aka sylvilagus palustris)
K: None of the above. | [K; G] |
<Instruct>: Given the context 'TGEV nsp1 also suppressed protein translation in cell-free HeLa cell extract; however, it did not affect translation in rabbit reticulocyte lysate (RRL).', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [tgev; rabbit]
<Options>: A: taggert virus
B: riverine rabbit (aka bunolagus monticularis)
C: grange virus
D: tgev miller m60 (transmissible gastroenteritis virus miller m60) (aka tgev miller m60)
E: transmissible gastroenteritis virus miller m6 (aka tgev miller m6)
F: lepus cuniculus cuniculus (aka oryctolagus cuniculus cuniculus)
G: sylvilagus palustris (lepus palustris) (aka sylvilagus palustris)
H: scrub hare (aka lepus saxatilis)
I: transmissible gastroenteritis virus tgev (aka transmissible gastroenteritis virus)
J: None of the above. | [J; J] |
<Instruct>: Given the context 'TGEV nsp1 also suppressed protein translation in cell-free HeLa cell extract; however, it did not affect translation in rabbit reticulocyte lysate (RRL).', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [tgev; rabbit]
<Options>: A: grange virus
B: tgev virulent purdue
C: riverine rabbit (aka bunolagus monticularis)
D: scrub hare (aka lepus saxatilis)
E: venezuelan equine encephalomyelitis virus (aka venezuelan equine encephalitis virus)
F: desert hare (aka lepus tibetanus)
G: transmissible gastroenteritis virus miller m60 (aka tgev miller m60)
H: lepus cuniculus cuniculus (aka oryctolagus cuniculus cuniculus)
I: rabbit (aka oryctolagus cuniculus)
J: taggert virus
K: None of the above. | [K; I] |
<Instruct>: Given the context 'Our data suggested that HeLa cell extracts and cultured host cells, but not RRL, contain a host factor(s) that is essential for TGEV nsp1-induced translational suppression.
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [tgev]
<Options>: A: tete virus (aka orthobunyavirus teteense)
B: tataguine virus
C: taggert virus
D: tsev (aka turkish sheep encephalitis virus) (aka turkish sheep encephalitis virus)
E: transmissible gastroenteritis virus miller m6 (aka tgev miller m6)
F: None of the above. | [F] |
<Instruct>: Given the context 'Climate effects on population fluctuations of the white-throated dipper Cinclus cinclus.
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [white-throated dipper; cinclus cinclus]
<Options>: A: white-throated dipper (aka cinclus cinclus)
B: cinclosoma cinnamomeus (aka cinclosoma cinnamomeum)
C: white-bellied duiker (aka cephalophorus leucogaster)
D: trichorcus cinctus
E: white-throated rail (aka dryolimnas cuvieri)
F: cinclus leucocephalus (white-capped dipper) (aka cinclus leucocephalus)
G: white-throated rock-thrush (aka monticola gularis)
H: white-rumped sandpiper (aka calidris fuscicollis)
I: cinclus mexicanus
J: None of the above. | [A; A] |
<Instruct>: Given the context 'Climate effects on population fluctuations of the white-throated dipper Cinclus cinclus.
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [white-throated dipper; cinclus cinclus]
<Options>: A: white-bellied duiker (aka cephalophorus leucogaster)
B: white-throated rail (aka dryolimnas cuvieri)
C: bar-winged cinclodes (aka cinclodes fuscus)
D: white-throated dipper (aka cinclus cinclus)
E: white-winged piprites (aka piprites chloris)
F: trichorcus cinctus
G: sehirus cinctus
H: turdoides leucocephala
I: chaetoceros cinctus
J: None of the above. | [D; D] |
<Instruct>: Given the context 'We have studied fluctuations in a population of the white-throated dipper Cinclus cinclus during 31 years (1978-2008) in a river system in southern Norway in relation to both large-scale and local weather conditions occurring during the non-breeding season.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [white-throated dipper; cinclus cinclus]
<Options>: A: white-shouldered fire-eye (aka pyriglena leucoptera)
B: cinclus mexicanus
C: white-throated dipper (aka cinclus cinclus)
D: cinclus leucocephalus (white-capped dipper) (aka cinclus leucocephalus)
E: white-throated robin (aka irania gutturalis)
F: white-eared brown-dove (aka phapitreron leucotis)
G: cinclosoma cinnamomeus (aka cinclosoma cinnamomeum)
H: chaetoceros cinctus
I: white-rumped seedeater (aka crithagra leucopygia)
J: None of the above. | [C; C] |
<Instruct>: Given the context 'We have studied fluctuations in a population of the white-throated dipper Cinclus cinclus during 31 years (1978-2008) in a river system in southern Norway in relation to both large-scale and local weather conditions occurring during the non-breeding season.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [white-throated dipper; cinclus cinclus]
<Options>: A: white-throated robin (aka irania gutturalis)
B: choeroichthys cinctus
C: white-headed blind snake (aka indotyphlops albiceps)
D: bar-winged cinclodes (aka cinclodes fuscus)
E: white-headed woodpecker (aka leuconotopicus albolarvatus)
F: sehirus cinctus
G: white-throated dipper (aka cinclus cinclus)
H: white-throated rail (aka dryolimnas cuvieri)
I: cinclus mexicanus
J: None of the above. | [G; G] |
<Instruct>: Given the context 'Modification of nonstructural protein 1 of influenza A virus by SUMO1.
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [influenza a virus]
<Options>: A: fluav (aka influenza a virus)
B: influenza virus (aka unidentified influenza virus)
C: duck influenza virus
D: influenza b virus (influenza virus type b) (aka influenza b virus)
E: influenzavirus a (aka alphainfluenzavirus)
F: None of the above. | [A] |
<Instruct>: Given the context 'Nonstructural protein 1 (NS1) is one of the major factors resulting in the efficient infection rate and high level of virulence of influenza A virus.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [influenza a virus]
<Options>: A: h1n1 swine influenza virus
B: influenza virus (aka unidentified influenza virus)
C: flubv (aka influenza b virus)
D: influenza c virus (influenza virus type c) (aka influenza c virus)
E: influenza virus type a (aka influenza a virus)
F: None of the above. | [E] |
<Instruct>: Given the context 'In the present study, we demonstrate that NS1 of the highly pathogenic avian influenza A/Duck/Hubei/L-1/2004 (H5N1) virus interacts with human Ubc9, which is the E2 conjugating enzyme for sumoylation, and we show that SUMO1 is conjugated to H5N1 NS1 in both transfected and infected cells.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [influenza; a/duck/hubei/l-1/2004 (h5n1) virus; human; h5n1]
<Options>: A: macrobiotus sapiens
B: influenza a virus (a/duck/hokkaido/1/2011(h5n1))
C: influenza a virus (a/duck/hunan/1152/2006(h5n1))
D: glossus humanus (cardium humanum) (aka glossus humanus)
E: influenza a virus (a/duck/hubei/r113/2013(h9))
F: influenza a virus (human influenza a virus) (aka influenza a virus)
G: influenza a virus (a/duck/hunan/782/2003(h5n1))
H: unidentified influenza virus (avian influenza virus) (aka unidentified influenza virus)
I: flubv (aka influenza b virus)
J: alphainfluenzavirus influenzae
K: gymnopleurus humanus
L: h1n1 swine influenza virus
M: hominidae (great apes) (aka hominidae)
N: human (aka homo sapiens)
O: influenza virus type b (aka influenza b virus)
P: h5n1 (aka h5n1 subtype) (aka h5n1 subtype)
Q: influenza a virus (a/duck/hubei/qf11/2008(h5))
R: equine influenza virus
S: None of the above. | [F; F; N; F] |
<Instruct>: Given the context 'In the present study, we demonstrate that NS1 of the highly pathogenic avian influenza A/Duck/Hubei/L-1/2004 (H5N1) virus interacts with human Ubc9, which is the E2 conjugating enzyme for sumoylation, and we show that SUMO1 is conjugated to H5N1 NS1 in both transfected and infected cells.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [influenza; a/duck/hubei/l-1/2004 (h5n1) virus; human; h5n1]
<Options>: A: influenza c viruses (aka influenza c virus)
B: alphainfluenzavirus influenzae
C: influenza a virus (a/duck/hunan/1265/2005(h5n1))
D: newt influenza virus
E: h1n1 swine influenza virus
F: influenza a virus (human influenza a virus) (aka influenza a virus)
G: influenza a virus (a/duck/hunan/1260/2006(h5n1))
H: influenza a virus (a/china)
I: influenza a virus (a/duck/hubei/qf11/2008(h5))
J: influenza a virus (a/duck/hubei/r113/2013(h9))
K: sphaeria humana (aka sordaria humana)
L: neandertal (aka homo sapiens neanderthalensis)
M: alphainfluenzavirus (influenzavirus a) (aka alphainfluenzavirus)
N: influenza a virus (a/duck/hunan/1231/2006(h5n1))
O: gymnopleurus humanus
P: human body louse (aka pediculus humanus corporis)
Q: swine influenza virus
R: gammainfluenzavirus influenzae
S: homo sapiens (human) (aka homo sapiens)
T: None of the above. | [F; F; S; F] |
<Instruct>: Given the context 'In the present study, we demonstrate that NS1 of the highly pathogenic avian influenza A/Duck/Hubei/L-1/2004 (H5N1) virus interacts with human Ubc9, which is the E2 conjugating enzyme for sumoylation, and we show that SUMO1 is conjugated to H5N1 NS1 in both transfected and infected cells.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [influenza; a/duck/hubei/l-1/2004 (h5n1) virus; human; h5n1]
<Options>: A: human louse (aka pediculus humanus)
B: influenza virus (aka unidentified influenza virus)
C: fluav (aka influenza a virus)
D: influenza a virus (a/duck/hubei/wq/2003(h5n1))
E: influenza a virus (a/duck/hunan/733/2004(h5n1))
F: influenzavirus a (aka alphainfluenzavirus)
G: h1n1 swine influenza virus
H: homo sapiens (human) (aka homo sapiens)
I: human body louse (aka pediculus humanus corporis)
J: influenza a virus (a/duck/hunan/1152/2006(h5n1))
K: influenza b virus (influenza virus type b) (aka influenza b virus)
L: humans (aka homo)
M: newt influenza virus
N: avian influenza virus (aka unidentified influenza virus)
O: flubv (aka influenza b virus)
P: hominidae (great apes) (aka hominidae)
Q: equine influenza virus
R: influenza a virus (a/duck/hunan/1213/2006(h5n1))
S: influenza a virus (a/duck/hubei/3/2005(h5n1))
T: None of the above. | [C; C; H; C] |
<Instruct>: Given the context 'In the present study, we demonstrate that NS1 of the highly pathogenic avian influenza A/Duck/Hubei/L-1/2004 (H5N1) virus interacts with human Ubc9, which is the E2 conjugating enzyme for sumoylation, and we show that SUMO1 is conjugated to H5N1 NS1 in both transfected and infected cells.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [influenza; a/duck/hubei/l-1/2004 (h5n1) virus; human; h5n1]
<Options>: A: influenza a virus (a/duck/hunan/733/2004(h5n1))
B: homo sapiens (human) (aka homo sapiens)
C: duck influenza virus
D: influenza a virus (a/duck/henan/1652/2006(h5n1))
E: equine influenza virus
F: influenza virus type b (aka influenza b virus)
G: influenza virus (aka unidentified influenza virus)
H: sphaeria humana (aka sordaria humana)
I: gammainfluenzavirus influenzae
J: influenza c virus (influenza virus type c) (aka influenza c virus)
K: influenza a virus (a/duck/hunan/1204/2006(h5n1))
L: human influenza a virus (aka influenza a virus)
M: influenza a virus (a/china)
N: influenza a virus (a/duck/hunan/1231/2006(h5n1))
O: great apes (aka hominidae)
P: influenza a virus (a/duck/hunan/1260/2006(h5n1))
Q: macrobiotus sapiens
R: h1n1 swine influenza virus
S: homo (humans) (aka homo)
T: None of the above. | [L; L; B; L] |
<Instruct>: Given the context 'Studies of different influenza A virus strains of human and avian origin showed that the majority of viruses possess an NS1 protein that is modified by SUMO1, except for the recently emerged swine-origin influenza A virus (S-OIV) (H1N1).', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [influenza a virus; human; swine-origin influenza a virus (s-oiv) (h1n1)]
<Options>: A: pediculus humanus corporis (pediculus humanus humanus) (aka pediculus humanus corporis)
B: equine influenza virus
C: swine influenza virus
D: avian influenza virus (aka unidentified influenza virus)
E: human (aka homo sapiens)
F: neandertal (aka homo sapiens neanderthalensis)
G: influenza a virus (human influenza a virus) (aka influenza a virus)
H: influenza a virus (a/swine/iowa/1/1986(h1n1))
I: gymnopleurus humanus
J: humans (aka homo)
K: influenza a virus (a/china)
L: influenza a virus (a/ws/1933(h1n1))
M: influenza c virus (influenza virus type c) (aka influenza c virus)
N: None of the above. | [G; E; G] |
<Instruct>: Given the context 'Studies of different influenza A virus strains of human and avian origin showed that the majority of viruses possess an NS1 protein that is modified by SUMO1, except for the recently emerged swine-origin influenza A virus (S-OIV) (H1N1).', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [influenza a virus; human; swine-origin influenza a virus (s-oiv) (h1n1)]
<Options>: A: influenza a virus (a/china)
B: unidentified influenza virus (avian influenza virus) (aka unidentified influenza virus)
C: human (aka homo sapiens)
D: influenza a virus (a/swine/iowa/1/1986(h1n1))
E: influenza virus type a (aka influenza a virus)
F: macrobiotus sapiens
G: equine influenza virus
H: glossus humanus (cardium humanum) (aka glossus humanus)
I: pediculus humanus (human louse) (aka pediculus humanus)
J: influenza a virus (a/ws/1933(h1n1))
K: influenza a virus (a/swine/iowa/2/1986(h1n1))
L: duck influenza virus
M: h1n1 swine influenza virus
N: hominidae (great apes) (aka hominidae)
O: None of the above. | [E; C; E] |
<Instruct>: Given the context 'Studies of different influenza A virus strains of human and avian origin showed that the majority of viruses possess an NS1 protein that is modified by SUMO1, except for the recently emerged swine-origin influenza A virus (S-OIV) (H1N1).', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [influenza a virus; human; swine-origin influenza a virus (s-oiv) (h1n1)]
<Options>: A: homo sapiens (human) (aka homo sapiens)
B: swine influenza virus
C: flubv (aka influenza b virus)
D: homo (humans) (aka homo)
E: human influenza a virus (aka influenza a virus)
F: alphainfluenzavirus (influenzavirus a) (aka alphainfluenzavirus)
G: neandertal man (aka homo sapiens neanderthalensis)
H: cardium humanum (aka glossus humanus)
I: duck influenza virus
J: influenza c viruses (aka influenza c virus)
K: hominidae (great apes) (aka hominidae)
L: avian influenza virus (aka unidentified influenza virus)
M: influenzavirus a (aka alphainfluenzavirus)
N: influenza a virus (a/ws/1933(h1n1))
O: None of the above. | [E; A; E] |
<Instruct>: Given the context 'Together, these results indicate that sumoylation enhances NS1 stability and thus promotes rapid growth of influenza A virus.
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [influenza a virus]
<Options>: A: h1n1 swine influenza virus
B: duck influenza virus
C: influenza c viruses (aka influenza c virus)
D: alphainfluenzavirus (influenzavirus a) (aka alphainfluenzavirus)
E: influenza a virus (human influenza a virus) (aka influenza a virus)
F: None of the above. | [E] |
<Instruct>: Given the context 'Stepwise loss of fluorescent core protein V from human adenovirus during entry into cells.
Human adenoviruses (Ads) replicate and assemble particles in the nucleus.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [human adenovirus; human adenoviruses (ads)]
<Options>: A: human adenovirus sp. (human adenovirus) (aka human adenovirus sp.)
B: human adenovirus 68 (human adenovirus type 68) (aka human adenovirus 68)
C: human adenovirus f (aka human mastadenovirus f)
D: unidentified adenovirus (adenovirus) (aka unidentified adenovirus)
E: human adenovirus 31 (human adenovirus type 31) (aka human adenovirus 31)
F: unidentified human adenovirus
G: human adenovirus (aka human adenovirus sp.)
H: human adenovirus type 5 (aka human adenovirus 5)
I: adenovirus type 1 (aka human adenovirus 1)
J: None of the above. | [D; D] |
<Instruct>: Given the context 'Stepwise loss of fluorescent core protein V from human adenovirus during entry into cells.
Human adenoviruses (Ads) replicate and assemble particles in the nucleus.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [human adenovirus; human adenoviruses (ads)]
<Options>: A: human adenovirus 71 (adenovirus type 71) (aka human adenovirus 71)
B: human adenovirus (aka human adenovirus sp.)
C: adenovirus (aka unidentified adenovirus)
D: unidentified human adenovirus
E: rodent adenovirus
F: human adenovirus type 5 (aka human adenovirus 5)
G: human adenovirus f (aka human mastadenovirus f)
H: human adenovirus 1 (human adenovirus type 1) (aka human adenovirus 1)
I: None of the above. | [C; C] |
<Instruct>: Given the context 'Disassembled capsids, positive for the conformation-specific antihexon antibody R70, were devoid of GFP-pV. The loss of GFP-pV was reduced by the macrolide antibiotic leptomycin B (LMB), which blocks nuclear export and adenovirus attachment to the nuclear pore complex.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [adenovirus]
<Options>: A: porcine adenovirus
B: unidentified adenovirus (adenovirus) (aka unidentified adenovirus)
C: adenovirus 7 (aka human adenovirus 7)
D: human adenovirus 1 (human adenovirus type 1) (aka human adenovirus 1)
E: adenovirus type 71 (aka human adenovirus 71)
F: None of the above. | [B] |
<Instruct>: Given the context 'LMB inhibited the appearance of R70 epitopes on Ad2 and Ad2-GFP-pV, indicating that the loss of GFP-pV from Ad2-GFP-pV is an authentic step in the adenovirus uncoating program.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [adenovirus]
<Options>: A: duck adeno-associated virus
B: adenovirus type 7 (aka human adenovirus 7)
C: adenovirus 14 (aka human adenovirus 14)
D: unidentified adenovirus (adenovirus) (aka unidentified adenovirus)
E: avian adeno-associated virus
F: None of the above. | [D] |
<Instruct>: Given the context 'Ad2-GFP-pV is genetically complete and hence enables detailed analyses of infection and spreading dynamics in cells and model organisms or assessment of oncolytic adenoviral potential.
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [adenoviral]
<Options>: A: human adenovirus d8 (human adenovirus type 8) (aka human adenovirus d8)
B: adenovirus (aka unidentified adenovirus)
C: unidentified human adenovirus
D: adenovirus 11 (aka human adenovirus 11)
E: duck adeno-associated virus
F: None of the above. | [B] |
<Instruct>: Given the context 'Novel mutations reveal two important regions in Aspergillus nidulans transcriptional activator MetR.
Expression of the sulfur assimilation pathway in Aspergillus nidulans is under control of sulfur metabolite repression, which is composed of scon genes encoding subunits of ubiquitin ligase and the metR gene coding for a transcriptional activator.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [aspergillus nidulans]
<Options>: A: aspergillus domesticus
B: aspergillus avenaceus
C: aphanothece nidulans
D: aspergillus neoellipticus (aka aspergillus fumigatus)
E: emericella nidulans (aka aspergillus nidulans)
F: None of the above. | [E] |
<Instruct>: Given the context 'Thus, metR18 and the three dominant suppressors represent new types of mutations affecting different parts of the A. nidulans MetR protein.
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [a. nidulans]
<Options>: A: aspergillus aureus
B: nassella nidulans
C: aspergillus avenaceus
D: aspergillus agricola
E: aspergillus nidulans (eidam) g. winter, 1884 (aka aspergillus nidulans)
F: None of the above. | [E] |
<Instruct>: Given the context 'Paralogous cyp51 genes in Fusarium graminearum mediate differential sensitivity to sterol demethylation inhibitors.
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [fusarium graminearum]
<Options>: A: fusarium avenaceum (gibberella avenacea r.j. cook, 1967) (aka fusarium avenaceum)
B: fusisporium cerealis (aka fusarium cerealis)
C: fusarium nodosum
D: gibberella zeae (schwein.) petch, 1936 (aka fusarium graminearum)
E: fusarium magnum
F: None of the above. | [D] |
<Instruct>: Given the context 'Analysis of the genome sequence of Fusarium graminearum revealed three paralogous cyp51 genes (designated cyp51A, -B, and -C) encoding 14-alpha demethylases in this fungus.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [fusarium graminearum]
<Options>: A: fusarium magnum
B: fusarium graminum
C: fusarium toxicum
D: fusarium nodosum
E: sphaeria zeae (aka fusarium graminearum)
F: None of the above. | [E] |
<Instruct>: Given the context 'Analysis of the genome sequence of Fusarium graminearum revealed three paralogous cyp51 genes (designated cyp51A, -B, and -C) encoding 14-alpha demethylases in this fungus.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [fusarium graminearum]
<Options>: A: fusarium toxicum
B: fusarium nodosum
C: fusarium magnum
D: fusarium graminum
E: None of the above. | [E] |
<Instruct>: Given the context 'Targeted gene disruption showed that the cyp51A, -B or -C disruption mutants were morphologically indistinguishable from the parent isolate on potato dextrose agar medium, which indicates that none of these genes is essential for mycelial growth.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [potato]
<Options>: A: potato-bean (aka pachyrhizus erosus)
B: ipomoea tuberosa (aka distimake tuberosus)
C: potato (aka solanum tuberosum)
D: ipomoea virgata
E: solanum paludosum
F: None of the above. | [C] |
<Instruct>: Given the context 'The sensitivity of F. graminearum isolates increased significantly when subjected in vitro to a mixture of DMI fungicides triadimefon and tebuconazole as compared to the individual components.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [f. graminearum]
<Options>: A: fusarium moniliforme (aka fusarium verticillioides)
B: fusarium thapsina (aka fusarium thapsinum)
C: fusarium pseudograminearum
D: fusarium domesticum (trichothecium domesticum) (aka fusarium domesticum)
E: gibberella zeae (aka fusarium graminearum)
F: None of the above. | [E] |
<Instruct>: Given the context 'These results indicate that different DMI fungicides target different CYP51 proteins in F. graminearum and that a mixture of DMI fungicides can result in synergistic effects.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [f. graminearum]
<Options>: A: fusarium thapsina (aka fusarium thapsinum)
B: fusarium culmorum (fusisporium culmorum) (aka fusarium culmorum)
C: fusarium zeae (fusisporium zeae) (aka fusarium zeae)
D: fusarium nodosum
E: fusarium graminearum (gibberella zeae (schwein.) petch, 1936) (aka fusarium graminearum)
F: None of the above. | [E] |
<Instruct>: Given the context 'Comparative sequence analysis of wheat and barley powdery mildew fungi reveals gene colinearity, dates divergence and indicates host-pathogen co-evolution.
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [wheat; barley]
<Options>: A: triticum triunciale (aka aegilops triuncialis)
B: rye (aka secale cereale) (aka secale cereale)
C: wild barley (aka hordeum vulgare subsp. spontaneum)
D: common wheat (aka triticum aestivum)
E: einkorn wheat (aka triticum monococcum)
F: triticum
G: hordeum brachyantherum
H: polish wheat (aka triticum polonicum)
I: hordeum marinum (seaside barley) (aka hordeum marinum)
J: barley (aka hordeum vulgare)
K: None of the above. | [D; J] |
<Instruct>: Given the context 'Comparative sequence analysis of wheat and barley powdery mildew fungi reveals gene colinearity, dates divergence and indicates host-pathogen co-evolution.
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [wheat; barley]
<Options>: A: wood-barley (aka hordelymus europaeus)
B: rye (aka secale cereale) (aka secale cereale)
C: hordeum vulgare (barley) (aka hordeum vulgare)
D: triticum peregrinum (aka aegilops peregrina)
E: triticum triunciale (aka aegilops triuncialis)
F: gibellia cerealis (aka gibellina cerealis)
G: triticum vulgare (aka triticum aestivum)
H: triticum
I: polish wheat (aka triticum polonicum)
J: domesticated barley (aka hordeum vulgare subsp. vulgare)
K: None of the above. | [G; C] |
<Instruct>: Given the context 'The two fungal pathogens Blumeria graminis f. sp. tritici (B.g. tritici) and hordei (B.g. hordei) cause powdery mildew specifically in wheat or barley.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [blumeria graminis f. sp. tritici; b.g. tritici; hordei; b.g. hordei]
<Options>: A: blumeria avenae (blumeria graminis f. sp. avenae) (aka blumeria avenae)
B: puccinia hordei
C: labidostomis hordei (cryptocephalus hordei) (aka labidostomis hordei)
D: grass mildew (aka blumeria hordei)
E: blumeria graminis (erysiphe graminis) (aka blumeria graminis)
F: bremia graminicola (aka graminivora graminicola)
G: gibbaeum hortenseae
H: heliconius hortense
I: gyge branchialis
J: bacillus horti
K: blumeria graminis f. sp. secalis
L: graminivora graminicola (bremia graminicola) (aka graminivora graminicola)
M: blumeria graminis f. sp. triticale
N: blumeria graminis f. sp. bromi (aka blumeria bulbigera)
O: hordeinae
P: blumeria graminicola (blumeria graminis f. sp. poae) (aka blumeria graminicola)
Q: bipolaris triticicola
R: None of the above. | [E; E; E; E] |
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