instruction stringlengths 209 946 | input stringlengths 96 1.45k | response stringlengths 3 12 |
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<Instruct>: Given the context 'Genomic profiling of carbohydrate metabolism in the ectomycorrhizal fungus Tuber melanosporum.
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [tuber melanosporum]
<Options>: A: black truffle (aka tuber melanosporum)
B: monotagma tuberosum
C: penicillium melanosporum
D: tuber polymorphosporum
E: tuber melosporum (picoa melospora) (aka tuber melosporum)
F: None of the above. | [A] |
<Instruct>: Given the context 'In this study, we used information retrieved from the recently sequenced Tuber melanosporum genome, together with transcriptome analysis data and targeted validation experiments, to construct the first genome-wide catalogue of the proteins supporting carbohydrate metabolism in a plant-symbiotic ascomycete.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [tuber melanosporum]
<Options>: A: french truffle (aka tuber melanosporum)
B: tuber polymorphosporum
C: monotagma tuberosum
D: tuber melanoexcavatum
E: tuber macrosporum
F: None of the above. | [A] |
<Instruct>: Given the context 'Transcriptional regulation of these pathways in different stages of the T. melanosporum lifecycle was investigated using whole-genome oligoarray expression data together with real-time reverse transcription-polymerase chain reaction analysis of selected genes.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [t. melanosporum]
<Options>: A: trichosporon oryzae (aka moesziomyces antarcticus)
B: tuber melosporum (picoa melospora) (aka tuber melosporum)
C: black truffle (aka tuber melanosporum)
D: tuber melanorufum
E: trichosporum
F: None of the above. | [C] |
<Instruct>: Given the context 'These data indicate a high degree of lifecycle stage specialization for particular branches of carbohydrate metabolism in T. melanosporum.
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [t. melanosporum]
<Options>: A: helicosporium luteosporum
B: perigord truffle (aka tuber melanosporum)
C: teichospora melanommoides
D: trichoderma album
E: trichoderma glaucum
F: None of the above. | [B] |
<Instruct>: Given the context 'Hyphal and cytoskeleton polarization in Tuber melanosporum: a genomic and cellular analysis.
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [tuber melanosporum]
<Options>: A: tuber macrosporum
B: perigord truffle (aka tuber melanosporum)
C: triepeolus melanarius
D: tuber melanoexcavatum
E: picoa melospora (aka tuber melosporum)
F: None of the above. | [B] |
<Instruct>: Given the context 'We have explored the Tuber melanosporum genome sequence by searching for homologs of genes known to play crucial roles in the morphogenesis and cell polarity of yeasts and filamentous fungi.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [tuber melanosporum; yeasts]
<Options>: A: tuber calosporum
B: monotagma tuberosum
C: zygotorulaspora
D: cryptomyces
E: saccharomyces fermentati (aka torulaspora delbrueckii)
F: saccharomyces cerevisiae (saccharomyces cerevisiae (desm.) meyen ex e.c. hansen, 1883) (aka saccharomyces cerevisiae)
G: black truffle (aka tuber melanosporum)
H: tuber macrosporum
I: torulaspora
J: tuber sphaerosporum
K: None of the above. | [G; F] |
<Instruct>: Given the context 'We have explored the Tuber melanosporum genome sequence by searching for homologs of genes known to play crucial roles in the morphogenesis and cell polarity of yeasts and filamentous fungi.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [tuber melanosporum; yeasts]
<Options>: A: saccharomyces lactis (aka kluyveromyces lactis)
B: tuber calosporum
C: monotagma tuberosum
D: mycophilomyces
E: saccharomyces cerevisiae (saccharomyces cerevisiae (desm.) meyen ex e.c. hansen, 1883) (aka saccharomyces cerevisiae)
F: saccharomycodes
G: tuber melanosporum (perigord truffle) (aka tuber melanosporum)
H: tuber melanorufum
I: penicillium melanosporum
J: saccharomyces albicans (aka candida albicans)
K: None of the above. | [G; E] |
<Instruct>: Given the context 'A detailed gene annotation has shown that most components of the cell polarity machinery, morphogenesis and cytoskeleton found in yeasts and filamentous fungi are conserved, although the degree of similarity varies from strong to weak.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [yeasts]
<Options>: A: saccharomyces cerevisiae (saccharomyces cerevisiae (desm.) meyen ex e.c. hansen, 1883) (aka saccharomyces cerevisiae)
B: saccharomyces hansenii (aka debaryomyces hansenii)
C: saccharomyces albicans (aka candida albicans)
D: torulaspora
E: zygotorulaspora
F: None of the above. | [A] |
<Instruct>: Given the context 'The osmosensing signal transduction pathway from Botrytis cinerea regulates cell wall integrity and MAP kinase pathways control melanin biosynthesis with influence of light.
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [botrytis cinerea]
<Options>: A: bombyx cinerea (aka porela cinerea)
B: botryotinia fuckeliana (aka botrytis cinerea)
C: botrytis narcissicola (aka botryotinia narcissicola)
D: botryllus horridus
E: botrytis californica
F: None of the above. | [B] |
<Instruct>: Given the context 'Here we show that the osmotic signal transduction cascade is involved in cell wall integrity in the phytopathogenic ascomycete Botrytis cinerea.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [botrytis cinerea]
<Options>: A: bombyx cinerea (aka porela cinerea)
B: botrytis ficariarum (aka botryotinia ficariarum)
C: roylea cinerea (ballota cinerea) (aka roylea cinerea)
D: botrytis nigra (aka virgaria nigra)
E: botryotinia fuckeliana (aka botrytis cinerea)
F: None of the above. | [E] |
<Instruct>: Given the context 'Testate amoebae have proved an interesting group of indicator organisms in palaeoenvironmental studies and have also been used as bioindicators of human impact on ecosystems.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [human]
<Options>: A: macrobiotus sapiens
B: human (aka homo sapiens)
C: gymnopleurus humanus
D: pediculus humanus humanus (aka pediculus humanus corporis)
E: hominidae (great apes) (aka hominidae)
F: None of the above. | [B] |
<Instruct>: Given the context '1. Fundamental and realized spatial niches were investigated through a combination of laboratory and mesocosm experiments, field observations and null model analysis in three intertidal gobiid species (Bathygobius fuscus, Chaenogobius annularis and C. gulosus).', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [bathygobius fuscus; chaenogobius annularis; c. gulosus]
<Options>: A: chaenogobius gulosus (chasmichthys gulosus) (aka chaenogobius gulosus)
B: parataeniophorus gulosus
C: pleurotus fuscus
D: gonatodes annularis (annulated gecko) (aka gonatodes annularis)
E: tropidophis fuscus
F: gonodactylellus annularis
G: chaenogobius annularis (forktongue goby) (aka chaenogobius annularis)
H: chaetonotus gulosus
I: neurachne annularis
J: glyptothorax fuscus
K: bathygobius fuscus (dusky frillgoby) (aka bathygobius fuscus)
L: apostenus fuscus
M: gecko annularis (aka tarentola annularis)
N: gladicosa gulosa
O: cottopsis gulosus (aka cottus gulosus)
P: None of the above. | [K; G; A] |
<Instruct>: Given the context '1. Fundamental and realized spatial niches were investigated through a combination of laboratory and mesocosm experiments, field observations and null model analysis in three intertidal gobiid species (Bathygobius fuscus, Chaenogobius annularis and C. gulosus).', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [bathygobius fuscus; chaenogobius annularis; c. gulosus]
<Options>: A: isometrus fuscus (aka zabius fuscus)
B: chaenogobius annularis (forktongue goby) (aka chaenogobius annularis)
C: gymnopus fuscus
D: thrasychirus gulosus
E: chaenogobius gulosus (chasmichthys gulosus) (aka chaenogobius gulosus)
F: gladicosa gulosa
G: tropidophis fuscus
H: glischrus annularis (aka oligolimax annularis)
I: lepomis gulosus (chaenobryttus gulosus) (aka lepomis gulosus)
J: bathygobius fuscus (dusky frillgoby) (aka bathygobius fuscus)
K: sinomicrurus annularis (callophis annularis) (aka sinomicrurus annularis)
L: haemogregarina annularis (aka hepatozoon annularis)
M: decadidymus gulosus
N: pomacanthus annularis (chaetodon annularis) (aka pomacanthus annularis)
O: acanthoclinus fuscus
P: None of the above. | [J; B; E] |
<Instruct>: Given the context '1. Fundamental and realized spatial niches were investigated through a combination of laboratory and mesocosm experiments, field observations and null model analysis in three intertidal gobiid species (Bathygobius fuscus, Chaenogobius annularis and C. gulosus).', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [bathygobius fuscus; chaenogobius annularis; c. gulosus]
<Options>: A: nectamia annularis (apogon annularis) (aka nectamia annularis)
B: sinomicrurus annularis (callophis annularis) (aka sinomicrurus annularis)
C: apostenus fuscus
D: decadidymus gulosus
E: sauroconcha gulosa (meridolum gulosa (gould, 1846)) (aka sauroconcha gulosa)
F: parataeniophorus gulosus
G: bathygadus favosus
H: saccostoma gulosus (aka chaenogobius gulosus)
I: gymnopus fuscus
J: haemogregarina annularis (aka hepatozoon annularis)
K: bathygobius fuscus (dusky frillgoby) (aka bathygobius fuscus)
L: gladicosa gulosa
M: neurachne annularis
N: chaenogobius annularis (forktongue goby) (aka chaenogobius annularis)
O: haploblepharus fuscus (brown shyshark) (aka haploblepharus fuscus)
P: None of the above. | [K; N; H] |
<Instruct>: Given the context 'Two Chaenogobius species, but not B. fuscus, decreased tidepool occupancy in the hetero-specific treatments compared with the mono-specific ones.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [b. fuscus]
<Options>: A: blaberus atropos (blaberus fusca) (aka blaberus atropos)
B: dendropemon fuscus
C: botula fusca (mytilus fuscus) (aka botula fusca)
D: fuscospora fusca (aka nothofagus fusca)
E: leiocassis fuscus (aka nanobagrus fuscus)
F: None of the above. | [F] |
<Instruct>: Given the context 'Morphology and ultrastructure of multiple life cycle stages of the photosynthetic relative of apicomplexa, Chromera velia.
Chromera velia is a photosynthetic alga with a secondary plastid that represents the closest known photosynthetic relative of the apicomplexan parasites.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [chromera velia]
<Options>: A: cladosporium velox
B: chromera velia (alveolata sp. rbm-2007) (aka chromera velia)
C: galera velata (aka conocybe velata)
D: astatotilapia velifer (aka haplochromis velifer)
E: theileria velifera
F: None of the above. | [B] |
<Instruct>: Given the context 'The original description of this organism was based on brownish, immotile coccoid cells, which is the predominating stage of C. velia in the culture.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [c. velia]
<Options>: A: conocybe velata (galera velata) (aka conocybe velata)
B: poecilia velifera (mollienesia velifera) (aka poecilia velifera)
C: chromera velia ccmp2878
D: vellozia candida
E: coloradia velda
F: None of the above. | [F] |
<Instruct>: Given the context 'Here we provide a detailed light and electron microscopy description of coccoid cells of C. velia and a previously undocumented bi-flagellated stage that is highly motile and moves in a characteristic zig-zag pattern.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [c. velia]
<Options>: A: coltricia velutina
B: caloplaca velana (aka variospora velana)
C: velia
D: conocybe velata (galera velata) (aka conocybe velata)
E: caridina cruzi
F: None of the above. | [F] |
<Instruct>: Given the context 'The C. velia cells contain a pseudoconoid, which is likely homologous to the corresponding structure in the apical complex of Apicomplexa, cortical alveoli subtended by subpellicular microtubules, mitochondrion with tubular cristae, a micropyle, and a distinctive chromerosome, an apparently novel type of extrusion organelle.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [c. velia]
<Options>: A: theileria velifera
B: velia concii
C: coltricia velutina
D: velia
E: cineraria albicans
F: None of the above. | [F] |
<Instruct>: Given the context 'Expression of the C-terminal ORF2 protein of duck astrovirus for application in a serological test.
Duck astrovirus (DAstV) is an important pathogen causing duck viral hepatitis (DVH), a highly contagious and fatal disease in young ducklings.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [duck astrovirus; dastv]
<Options>: A: duck aviadenovirus
B: rose spring dwarf-associated virus
C: saddaguia virus
D: duck circovirus
E: duck astrovirus gii.a
F: bat adeno-associated virus
G: bat adeno-associated virus btaav-ds2
H: drosophila a virus
I: duck influenza virus
J: duck picornavirus
K: None of the above. | [E; E] |
<Instruct>: Given the context 'Expression of the C-terminal ORF2 protein of duck astrovirus for application in a serological test.
Duck astrovirus (DAstV) is an important pathogen causing duck viral hepatitis (DVH), a highly contagious and fatal disease in young ducklings.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [duck astrovirus; dastv]
<Options>: A: turkey astrovirus
B: bat adeno-associated virus
C: tasmanian devil retrovirus
D: avian astrovirus 7
E: duck astrovirus gii.a
F: tasmanian devil-associated sapelovirus
G: avian astrovirus
H: avian astrovirus 2
I: drosophila-associated tymovirus
J: swine vesicular disease virus
K: None of the above. | [E; E] |
<Instruct>: Given the context 'To provide an antigen for a diagnostic serum test, the C-terminus of DAstV ORF2 protein was expressed in Escherichia coli.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [escherichia coli]
<Options>: A: escherichia coli c
B: bacillus coli (aka escherichia coli)
C: escherichia coli nissle 1917 (escherichia coli strain nissle 1917) (aka escherichia coli nissle 1917)
D: escherichia freundii (aka citrobacter freundii)
E: enterobacter aerogenes (aka klebsiella aerogenes)
F: None of the above. | [B] |
<Instruct>: Given the context 'No cross-reactions were found against other duck pathogens, including duck hepatitis A virus, duck plague herpesvirus, duck reovirus, Newcastle disease virus, and Riemerella anatipestifer 12/19 (63.2%) and 26/51 (51%) sera samples from two flocks of ducks that survived DAstV infections in commercial duck farms were positive for DAstV by this method, respectively.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [duck hepatitis a virus; duck plague herpesvirus; duck reovirus; newcastle disease virus]
<Options>: A: newcastle disease virus (aka avian paramyxovirus 1)
B: newcastle disease virus (strain t53)
C: duck reovirus sd-12
D: bat-associated reovirus
E: human hepatitis a virus (hhav (aka human hepatitis a virus))
F: newcastle disease virus (strain australia-victoria/32)
G: duck circovirus
H: duck influenza virus
I: avian reovirus (aka avian orthoreovirus)
J: duck hepacivirus
K: newcastle disease virus b1 (newcastle disease virus strain b1) (aka newcastle disease virus b1)
L: rabbit haemorrhagic disease virus (aka rabbit hemorrhagic disease virus)
M: avihepatovirus a (duck hepatitis virus type 1) (aka avihepatovirus a)
N: duck plague virus (aka anatid alphaherpesvirus 1)
O: duck rhabdovirus
P: gallid herpesvirus
Q: newcastle disease virus (strain texas)
R: duck hepatitis a virus (aka avihepatovirus a)
S: duck hepatitis virus type 3 (aka duck hepatitis virus 3)
T: None of the above. | [M; N; I; A] |
<Instruct>: Given the context 'No cross-reactions were found against other duck pathogens, including duck hepatitis A virus, duck plague herpesvirus, duck reovirus, Newcastle disease virus, and Riemerella anatipestifer 12/19 (63.2%) and 26/51 (51%) sera samples from two flocks of ducks that survived DAstV infections in commercial duck farms were positive for DAstV by this method, respectively.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [duck hepatitis a virus; duck plague herpesvirus; duck reovirus; newcastle disease virus]
<Options>: A: piscine reovirus (aka piscine orthoreovirus)
B: duck hepatitis virus type 2 (aka duck hepatitis virus 2)
C: marek's disease virus (aka gallid alphaherpesvirus 2)
D: passer domesticus herpesvirus
E: reoviruses (aka orthoreovirus)
F: duck hepatitis b virus (dhbv (aka duck hepatitis b virus))
G: duck rhabdovirus
H: newcastle disease virus (strain texas g.b./48)
I: hav (aka hepatovirus a) (aka hepatovirus a)
J: newcastle disease virus (strain iba/85)
K: duck hepatitis virus type 1 (aka avihepatovirus a)
L: avian orthoreovirus (avian reovirus) (aka avian orthoreovirus)
M: duck plague virus (aka anatid alphaherpesvirus 1)
N: duck hepatitis a virus 2 (dhav-2) (aka duck hepatitis a virus 2)
O: bat-associated reovirus
P: duck hepatitis virus, dhbv (aka duck hepatitis b virus)
Q: goose reovirus
R: newcastle disease virus ndv (aka avian paramyxovirus 1)
S: newcastle disease virus (strain kansas)
T: None of the above. | [K; M; L; R] |
<Instruct>: Given the context 'No cross-reactions were found against other duck pathogens, including duck hepatitis A virus, duck plague herpesvirus, duck reovirus, Newcastle disease virus, and Riemerella anatipestifer 12/19 (63.2%) and 26/51 (51%) sera samples from two flocks of ducks that survived DAstV infections in commercial duck farms were positive for DAstV by this method, respectively.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [duck hepatitis a virus; duck plague herpesvirus; duck reovirus; newcastle disease virus]
<Options>: A: newcastle disease virus (strain iba/85)
B: avian nephritis virus
C: gallid herpesvirus
D: fowl plague virus (fpv (aka fowl plague virus))
E: newcastle disease virus ndv (aka avian paramyxovirus 1)
F: duck influenza virus
G: marek disease virus (aka gallid alphaherpesvirus 2)
H: duck hepatitis a virus 2 (dhav-2) (aka duck hepatitis a virus 2)
I: muscovy duck reovirus
J: duck reovirus
K: duck hepatitis b virus (dhbv (aka duck hepatitis b virus))
L: denalis virus
M: newcastle disease virus b1 (newcastle disease virus strain b1) (aka newcastle disease virus b1)
N: newcastle disease virus (strain las/46)
O: duck hepatitis virus 1 (aka avihepatovirus a)
P: avian orthoreovirus (avian reovirus) (aka avian orthoreovirus)
Q: duck circovirus
R: hhav (aka human hepatitis a virus) (aka human hepatitis a virus)
S: avian hepatitis e virus
T: duck enteritis virus (aka anatid alphaherpesvirus 1)
U: None of the above. | [O; T; P; E] |
<Instruct>: Given the context 'No cross-reactions were found against other duck pathogens, including duck hepatitis A virus, duck plague herpesvirus, duck reovirus, Newcastle disease virus, and Riemerella anatipestifer 12/19 (63.2%) and 26/51 (51%) sera samples from two flocks of ducks that survived DAstV infections in commercial duck farms were positive for DAstV by this method, respectively.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [duck hepatitis a virus; duck plague herpesvirus; duck reovirus; newcastle disease virus]
<Options>: A: avian nephritis virus
B: duck hepatitis a virus (aka avihepatovirus a)
C: duck reovirus
D: newcastle disease virus strain b1 (aka newcastle disease virus b1)
E: duck hepatitis b virus (dhbv (aka duck hepatitis b virus))
F: reyvirus (reylikevirus) (aka reyvirus)
G: duck reovirus sy
H: passer domesticus herpesvirus
I: hepatitis a virus (aka hepatovirus a)
J: avian reovirus (aka avian orthoreovirus)
K: denalis virus
L: duck influenza virus
M: newcastle disease virus (strain gam61)
N: muscovy duck reovirus
O: duck hepatitis virus type 3 (aka duck hepatitis virus 3)
P: avian hepatitis e virus
Q: newcastle disease virus (strain kansas)
R: marek's disease virus (aka gallid alphaherpesvirus 2)
S: duck enteritis virus (aka anatid alphaherpesvirus 1)
T: newcastle disease virus (aka avian paramyxovirus 1)
U: None of the above. | [B; S; J; T] |
<Instruct>: Given the context 'No cross-reactions were found against other duck pathogens, including duck hepatitis A virus, duck plague herpesvirus, duck reovirus, Newcastle disease virus, and Riemerella anatipestifer 12/19 (63.2%) and 26/51 (51%) sera samples from two flocks of ducks that survived DAstV infections in commercial duck farms were positive for DAstV by this method, respectively.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [duck hepatitis a virus; duck plague herpesvirus; duck reovirus; newcastle disease virus]
<Options>: A: duck influenza virus
B: newcastle disease virus (aka avian paramyxovirus 1)
C: muscovy duck reovirus
D: hepatitis a virus (aka hepatovirus a)
E: denalis virus
F: duck reovirus
G: reyvirus (reylikevirus) (aka reyvirus)
H: avian hepatitis e virus
I: duck hepatitis b virus (dhbv (aka duck hepatitis b virus))
J: duck enteritis virus (aka anatid alphaherpesvirus 1)
K: duck reovirus sy
L: marek's disease virus (aka gallid alphaherpesvirus 2)
M: duck hepatitis a virus (aka avihepatovirus a)
N: newcastle disease virus (strain kansas)
O: passer domesticus herpesvirus
P: newcastle disease virus strain b1 (aka newcastle disease virus b1)
Q: duck hepatitis virus type 3 (aka duck hepatitis virus 3)
R: newcastle disease virus (strain gam61)
S: avian nephritis virus
T: None of the above. | [M; J; T; B] |
<Instruct>: Given the context 'No cross-reactions were found against other duck pathogens, including duck hepatitis A virus, duck plague herpesvirus, duck reovirus, Newcastle disease virus, and Riemerella anatipestifer 12/19 (63.2%) and 26/51 (51%) sera samples from two flocks of ducks that survived DAstV infections in commercial duck farms were positive for DAstV by this method, respectively.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [riemerella anatipestifer 12/19; 26/51; dastv]
<Options>: A: drosophila a virus
B: alpha proteobacterium or-51
C: bacterium 5/6-22
D: testadenovirus
E: riemerella anatipestifer atcc 11845 (aka riemerella anatipestifer atcc 11845 = dsm 15868)
F: riemerella anatipestifer ch3
G: riemerella anatipestifer str. ra-ym (aka riemerella anatipestifer ra-ym)
H: pasteurella anapestifer (aka riemerella anatipestifer)
I: dstusv (aka sigmavirus sturtevanti)
J: duck adeno-associated virus
K: tasmanian devil-associated sapelovirus
L: 16srx (apple proliferation group)
M: riemerella anatipestifer strain ra-gd (aka riemerella anatipestifer ra-gd)
N: bacterium 26gr
O: flumine dicistrovirus 51
P: None of the above. | [H; H; P] |
<Instruct>: Given the context 'No cross-reactions were found against other duck pathogens, including duck hepatitis A virus, duck plague herpesvirus, duck reovirus, Newcastle disease virus, and Riemerella anatipestifer 12/19 (63.2%) and 26/51 (51%) sera samples from two flocks of ducks that survived DAstV infections in commercial duck farms were positive for DAstV by this method, respectively.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [riemerella anatipestifer 12/19; 26/51; dastv]
<Options>: A: enterobacteriaceae bacterium ae51
B: drosophila a virus
C: bacterium 6/2/1
D: tdav (aka theiler's disease-associated virus) (aka theiler's disease-associated virus)
E: riemerella anatipestifer atcc 11845 (aka riemerella anatipestifer atcc 11845 = dsm 15868)
F: riemerella anatipestifer-like (aka riemerella columbina)
G: alpha proteobacterium or-51
H: duck adeno-associated virus
I: flumine dicistrovirus 51
J: testadenovirus
K: duck flavivirus kps54a61/tha
L: moraxella anatipestifer (aka riemerella anatipestifer)
M: tasvd (aka tomato apical stunt viroid)
N: allocoenonia anatina (riemerella anatipestifer-like taxon 1502) (aka allocoenonia anatina)
O: riemerella anatipestifer strain ra-gd (aka riemerella anatipestifer ra-gd)
P: None of the above. | [L; L; P] |
<Instruct>: Given the context 'No cross-reactions were found against other duck pathogens, including duck hepatitis A virus, duck plague herpesvirus, duck reovirus, Newcastle disease virus, and Riemerella anatipestifer 12/19 (63.2%) and 26/51 (51%) sera samples from two flocks of ducks that survived DAstV infections in commercial duck farms were positive for DAstV by this method, respectively.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [riemerella anatipestifer 12/19; 26/51; dastv]
<Options>: A: riemerella anatipestifer nctc 11014 (aka riemerella anatipestifer atcc 11845 = dsm 15868)
B: duck adeno-associated virus
C: tasmanian devil retrovirus
D: australomymar
E: bacterium 51
F: riemerella anatipestifer-like (aka riemerella columbina)
G: human rhinovirus nh253
H: bat adeno-associated virus
I: pfeifferella anatipestifer (aka riemerella anatipestifer)
J: drosophila-associated tymovirus
K: riemerella anatipestifer ch3
L: proteobacterium 5-52
M: tasmanian devil-associated sapelovirus
N: bacterium 6/2/1
O: allocoenonia anatina (riemerella anatipestifer-like taxon 1502) (aka allocoenonia anatina)
P: None of the above. | [I; I; P] |
<Instruct>: Given the context 'Interestingly, DAstV-specific antibodies were also detected in 12 (28.6%) of 42 sera samples from a different flock without DVH, indicating a wide distribution of subclinical infections caused by DAstV.
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [dastv]
<Options>: A: saddaguia virus
B: tasmanian devil-associated sapelovirus
C: tasmanian devil retrovirus
D: bat adeno-associated virus
E: dstusv (aka sigmavirus sturtevanti)
F: None of the above. | [F] |
<Instruct>: Given the context '2. We examined whether flock size risk thresholds for attack rate, success rate or dilution differed, and therefore whether the strength of selection for group size differed for these three factors, using a system of redshank Tringa totanus flocks being hunted by Eurasian sparrowhawks Accipiter nisus.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [redshank; tringa totanus; eurasian sparrowhawks; accipiter nisus]
<Options>: A: tabanus trigonus
B: tabanus turbidus
C: red wolf (aka canis rufus)
D: lesser nighthawk (aka chordeiles acutipennis)
E: accipiter striatus (sharp-shinned hawk) (aka accipiter striatus)
F: sao francisco sparrow (aka arremon franciscanus)
G: red whalefish (aka barbourisia rufa)
H: norway redfish (aka sebastes viviparus)
I: eurasian sparrowhawk (aka accipiter nisus)
J: cora accipiter
K: tringa totanus (scolopax totanus) (aka tringa totanus)
L: accipiter macrourus (aka circus macrourus)
M: accipiter chilensis
N: reduvius
O: redbait (aka emmelichthys nitidus)
P: falco nisus nisus (aka accipiter nisus nisus)
Q: totanus stagnatilis (aka tringa stagnatilis)
R: accipiter bicolor (sparvius bicolor) (aka accipiter bicolor)
S: tabanus sannio
T: None of the above. | [K; K; I; I] |
<Instruct>: Given the context '2. We examined whether flock size risk thresholds for attack rate, success rate or dilution differed, and therefore whether the strength of selection for group size differed for these three factors, using a system of redshank Tringa totanus flocks being hunted by Eurasian sparrowhawks Accipiter nisus.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [redshank; tringa totanus; eurasian sparrowhawks; accipiter nisus]
<Options>: A: red-tailed snakehead (aka channa gachua)
B: agriocnemis toto
C: tringa totanus (scolopax totanus) (aka tringa totanus)
D: accipiter
E: house sparrow (aka passer domesticus)
F: northern goshawk (aka accipiter gentilis)
G: panthous ruber
H: cora accipiter
I: rhodnius domesticus
J: tabanus callosus
K: spotted redshank (aka tringa erythropus)
L: redfish (aka sebastes marinus)
M: accipiter albogularis
N: tabanus crassus
O: accipiter nisus (eurasian sparrowhawk) (aka accipiter nisus)
P: totanus stagnatilis (aka tringa stagnatilis)
Q: accipiter erythropus (nisus erythropus) (aka accipiter erythropus)
R: sparrows (aka passeridae)
S: accipiter griseiceps (astur griseiceps) (aka accipiter griseiceps)
T: None of the above. | [C; C; O; O] |
<Instruct>: Given the context '2. We examined whether flock size risk thresholds for attack rate, success rate or dilution differed, and therefore whether the strength of selection for group size differed for these three factors, using a system of redshank Tringa totanus flocks being hunted by Eurasian sparrowhawks Accipiter nisus.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [redshank; tringa totanus; eurasian sparrowhawks; accipiter nisus]
<Options>: A: accipiter albogularis
B: arremon franciscanus (sao francisco sparrow) (aka arremon franciscanus)
C: scolopax totanus (aka tringa totanus)
D: norway redfish (aka sebastes viviparus)
E: accipiter nisus (eurasian sparrowhawk) (aka accipiter nisus)
F: voltinia totonaca (napaea totonaca) (aka voltinia totonaca)
G: red-tailed snakehead (aka channa gachua)
H: tabanus gratus
I: redthroat (aka pyrrholaemus brunneus)
J: tringa stagnatilis (totanus stagnatilis) (aka tringa stagnatilis)
K: redfin (aka perca fluviatilis)
L: accipiter striatus (sharp-shinned hawk) (aka accipiter striatus)
M: reticunassa tringa (nassa tringa) (aka reticunassa tringa)
N: cora accipiter
O: turdus rubrocanus
P: accipiter nisus punicus
Q: northern goshawk (aka accipiter gentilis)
R: accipiter imitator
S: accipiter bicolor (sparvius bicolor) (aka accipiter bicolor)
T: None of the above. | [C; C; E; E] |
<Instruct>: Given the context '2. We examined whether flock size risk thresholds for attack rate, success rate or dilution differed, and therefore whether the strength of selection for group size differed for these three factors, using a system of redshank Tringa totanus flocks being hunted by Eurasian sparrowhawks Accipiter nisus.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [redshank; tringa totanus; eurasian sparrowhawks; accipiter nisus]
<Options>: A: tabanus turbidus
B: redfin (aka perca fluviatilis)
C: nisus brutus (aka accipiter francesiae brutus)
D: lesser nighthawk (aka chordeiles acutipennis)
E: scolopax totanus (aka tringa totanus)
F: chinese goshawk (aka accipiter soloensis)
G: accipiter imitator
H: redbait (aka emmelichthys nitidus)
I: accipiter chilensis
J: golden redfish (aka sebastes norvegicus)
K: scolopax totanus totanus (aka tringa totanus totanus)
L: accipiter nisus (eurasian sparrowhawk) (aka accipiter nisus)
M: red river hog (aka potamochoerus porcus)
N: red wolf (aka canis rufus)
O: accipiter erythropus (nisus erythropus) (aka accipiter erythropus)
P: accipiter gularis (japanese sparrowhawk) (aka accipiter gularis)
Q: sparvius bicolor (aka accipiter bicolor)
R: kyrtuthrix totonaca
S: erica totta
T: None of the above. | [E; E; L; L] |
<Instruct>: Given the context '3. Mean redshank flock size increased with a very gradual quadratic function (i.e. approximately linearly) with population size, although at a rate half that possible; when population size was not limiting, individuals almost always avoided flocks of less than 30 and birds were frequently in flocks up to at least 80.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [redshank]
<Options>: A: red wolf (aka canis rufus)
B: redfish (aka sciaenops ocellatus)
C: norway redfish (aka sebastes viviparus)
D: redfish (aka sebastes marinus)
E: redcoat (aka sargocentron rubrum)
F: None of the above. | [F] |
<Instruct>: Given the context 'Sparrowhawk attack rate showed a quadratic relationship with flock size and peaked at 55 redshanks.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [sparrowhawk; redshanks]
<Options>: A: cora accipiter
B: panthous ruber
C: chinese goshawk (aka accipiter soloensis)
D: golden redfish (aka sebastes norvegicus)
E: sparrows (aka passeridae)
F: accipiter nisus (eurasian sparrowhawk) (aka accipiter nisus)
G: japanese sparrowhawk (aka accipiter gularis)
H: norway redfish (aka sebastes viviparus)
I: red serow (aka capricornis rubidus)
J: red-tailed snakehead (aka channa gachua)
K: None of the above. | [F; K] |
<Instruct>: Given the context 'Sparrowhawk attack rate showed a quadratic relationship with flock size and peaked at 55 redshanks.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [sparrowhawk; redshanks]
<Options>: A: eurasian goshawk (aka accipiter gentilis)
B: fox sparrow (aka passerella iliaca)
C: redeye (aka scardinius erythrophthalmus)
D: rubus tardus
E: accipiter striatus striatus
F: norway redfish (aka sebastes viviparus)
G: accipiter bicolor (sparvius bicolor) (aka accipiter bicolor)
H: accipiter nisus (eurasian sparrowhawk) (aka accipiter nisus)
I: redbait (aka emmelichthys nitidus)
J: redcoat (aka sargocentron rubrum)
K: None of the above. | [H; K] |
<Instruct>: Given the context 'Sparrowhawk attack success rate, however, declined exponentially, becoming less steep at flock sizes of about 40 and remaining uniformly low (a 95% decrease) by 70.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [sparrowhawk]
<Options>: A: accipiter striatus striatus
B: sparrows (aka passeridae)
C: accipiter soloensis (chinese goshawk) (aka accipiter soloensis)
D: accipiter nisus (eurasian sparrowhawk) (aka accipiter nisus)
E: accipiter gularis (japanese sparrowhawk) (aka accipiter gularis)
F: None of the above. | [D] |
<Instruct>: Given the context '4. Redshanks most commonly formed group sizes that gained the maximum individual predation risk reduction.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [redshanks]
<Options>: A: golden redfish (aka sebastes norvegicus)
B: panthous ruber
C: redspot cardinalfish (aka ostorhinchus rubrimacula)
D: redbait (aka emmelichthys nitidus)
E: reduvius
F: None of the above. | [F] |
<Instruct>: Given the context '2. We studied the impact of two ant species common in Central Europe, Myrmica rubra and Lasius niger, on an arthropod community.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [myrmica rubra; lasius niger]
<Options>: A: lathyrus niger
B: corymbia rubra
C: amanita rubra (aka russula rubra)
D: aparallactus niger
E: anisandrus niger
F: miconia rubra (melastoma rubrum) (aka miconia rubra)
G: munkovalsaria rubra (aka myrmaecium rubrum)
H: pilophorus niger
I: myrmica rubra (formica rubra) (aka myrmica rubra)
J: lasius (lasius) niger (aka lasius niger)
K: None of the above. | [I; J] |
<Instruct>: Given the context '2. We studied the impact of two ant species common in Central Europe, Myrmica rubra and Lasius niger, on an arthropod community.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [myrmica rubra; lasius niger]
<Options>: A: macrocarpaea rubra
B: lasius (lasius) niger (aka lasius niger)
C: rhexia rubra
D: dryinus niger
E: limnoxenus niger
F: marcgravia rubra
G: cyperus niger
H: massilia rubra (mokoshia rubra) (aka massilia rubra)
I: hydroporus niger
J: myrmica rubra (formica rubra) (aka myrmica rubra)
K: None of the above. | [J; B] |
<Instruct>: Given the context 'Generally, effects of the two ant species were similar with the exception of their effect on Braconidae parasitoid densities that responded positively to one colony of M. rubra but not of L. niger.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [m. rubra; l. niger]
<Options>: A: musa rubra
B: nonomuraea rubra (microtetraspora rubra) (aka nonomuraea rubra)
C: macrocarpaea rubra
D: leptolejeunea nigra
E: lophurella nigra
F: myrmica rubra (formica rubra) (aka myrmica rubra)
G: malonomonas rubra
H: zygophylax niger
I: aphodius niger (liothorax niger) (aka aphodius niger)
J: lasius niger (lasius (lasius) niger) (aka lasius niger)
K: None of the above. | [F; J] |
<Instruct>: Given the context 'Generally, effects of the two ant species were similar with the exception of their effect on Braconidae parasitoid densities that responded positively to one colony of M. rubra but not of L. niger.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [m. rubra; l. niger]
<Options>: A: myrmica rubra (formica rubra) (aka myrmica rubra)
B: limnoxenus niger
C: meloe niger
D: macrocarpaea rubra
E: melithaea rubra (acabaria rubra) (aka melithaea rubra)
F: nonomuraea rubra (microtetraspora rubra) (aka nonomuraea rubra)
G: liris niger
H: lonomia nigra
I: marmosa rubra (red mouse opossum) (aka marmosa rubra)
J: lasius (lasius) niger (aka lasius niger)
K: None of the above. | [A; J] |
<Instruct>: Given the context 'This effect was independent of ant colony density, but where two colonies were present, spider richness was significantly greater in plots with two M. rubra colonies than in plots with one colony of each ant species.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [m. rubra]
<Options>: A: malonomonas rubra
B: montia rubra (aka claytonia rubra)
C: rubroshorea rubra (shorea rubra) (aka rubroshorea rubra)
D: meiogyne rubra
E: myrmica rubra (formica rubra) (aka myrmica rubra)
F: None of the above. | [E] |
<Instruct>: Given the context 'are extremely rarely parasitized by common cuckoos Cuculus canorus despite breeding commonly in sympatry and building the most conspicuous nests among forest-breeding passerines.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [common cuckoos; cuculus canorus]
<Options>: A: cuculus saturatus (oriental cuckoo) (aka cuculus saturatus)
B: madagascar cuckoo (aka cuculus rochii)
C: cucumis globosus
D: cucumis trigonus
E: ranunculus canus
F: cuculus canorus bakeri
G: lesser cuckoo (aka cuculus poliocephalus)
H: cuculus canorus (common cuckoo) (aka cuculus canorus)
I: None of the above. | [H; H] |
<Instruct>: Given the context 'are extremely rarely parasitized by common cuckoos Cuculus canorus despite breeding commonly in sympatry and building the most conspicuous nests among forest-breeding passerines.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [common cuckoos; cuculus canorus]
<Options>: A: cucumis indicus
B: cuculus gularis (african cuckoo) (aka cuculus gularis)
C: yellow-billed cuckoo (aka coccyzus americanus)
D: cuculus canorus canorus
E: cucumis debilis
F: cuculus canorus (common cuckoo) (aka cuculus canorus)
G: cuculus saturatus (oriental cuckoo) (aka cuculus saturatus)
H: cucumis trigonus
I: lesser cuckoo (aka cuculus poliocephalus)
J: None of the above. | [F; F] |
<Instruct>: Given the context 'No single examined factor explained cuckoo avoidance of thrushes.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [cuckoo]
<Options>: A: cucumella cinerea (aka cucumis cinereus)
B: cucumis melo (oriental melon) (aka cucumis melo)
C: cucumbers (aka cucumis sativus)
D: common cuckoo (aka cuculus canorus)
E: cucumis omissus
F: None of the above. | [D] |
<Instruct>: Given the context 'Life-history traits of all six European thrush species and the 10 most frequently used cuckoo hosts in Europe were similar except body/egg size, nest design and nestling diet.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [cuckoo]
<Options>: A: madagascar cuckoo (aka cuculus rochii)
B: cucumis
C: cuculus canorus (common cuckoo) (aka cuculus canorus)
D: cucumis carolinus
E: cucurbita pepo
F: None of the above. | [C] |
<Instruct>: Given the context '4. Experiments (n = 1211) in several populations across Europe showed that host defences at egg-laying and incubation stages did not account for the lack of cuckoo parasitism in thrushes.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [cuckoo]
<Options>: A: cucumis omissus
B: cuckoos (aka cuculidae)
C: cucumis trigonus
D: cucurbita pepo
E: common cuckoo (aka cuculus canorus)
F: None of the above. | [E] |
<Instruct>: Given the context 'However, cross-fostering experiments disclosed that various factors during the nestling period prevent cuckoos from successfully parasitizing thrushes.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [cuckoos]
<Options>: A: cuculus canorus (common cuckoo) (aka cuculus canorus)
B: cucumis omissus
C: cucumis debilis
D: cucumis carolinus
E: cucumis melo (oriental melon) (aka cucumis melo)
F: None of the above. | [A] |
<Instruct>: Given the context 'However, cross-fostering experiments disclosed that various factors during the nestling period prevent cuckoos from successfully parasitizing thrushes.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [cuckoos]
<Options>: A: cucumis debilis
B: cucumis melo (oriental melon) (aka cucumis melo)
C: cucumis carolinus
D: cucumis omissus
E: None of the above. | [E] |
<Instruct>: Given the context 'Specifically, in some thrush species, the nest cup design forced cuckoo chicks to compete with host chicks with fatal consequences for the parasite.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [cuckoo]
<Options>: A: cucumis melo (oriental melon) (aka cucumis melo)
B: cucumis trigonus
C: african cuckoo (aka cuculus gularis)
D: cuculus canorus (common cuckoo) (aka cuculus canorus)
E: madagascar cuckoo (aka cuculus rochii)
F: None of the above. | [D] |
<Instruct>: Given the context 'Other species were reluctant to care even for lone cuckoo chicks.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [cuckoo]
<Options>: A: cucumbers (aka cucumis sativus)
B: cucumis carolinus
C: cuculus canorus (common cuckoo) (aka cuculus canorus)
D: indian cuckoo (aka cuculus micropterus)
E: cucumis
F: None of the above. | [C] |
<Instruct>: Given the context 'Importantly, in an apparently phylogenetically homogenous group of hosts, there were interspecific differences in factors responsible for the absence of cuckoo parasitism.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [cuckoo]
<Options>: A: cuculus canorus (common cuckoo) (aka cuculus canorus)
B: madagascar cuckoo (aka cuculus rochii)
C: cucumis carolinus
D: cucumbers (aka cucumis sativus)
E: indian cuckoo (aka cuculus micropterus)
F: None of the above. | [A] |
<Instruct>: Given the context 'Characterization of the GPI-anchored endo Beta-1,3-glucanase Eng2 of Aspergillus fumigatus.
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [aspergillus fumigatus]
<Options>: A: aspergillus nidulellus (aka aspergillus nidulans)
B: eurotium oryzae (aka aspergillus oryzae)
C: aspergillus fumigatus fresen., 1863 (aka aspergillus fumigatus)
D: aspergillus asper (aspergillus asperus) (aka aspergillus asper)
E: aspergillus terricola
F: None of the above. | [C] |
<Instruct>: Given the context 'A GPI-anchored endo Beta-1,3-glucanase of Aspergillus fumigatus was characterized.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [aspergillus fumigatus]
<Options>: A: aspergillus aerius
B: aspergillus fumigatus (aspergillus fumigatus var. ellipticus) (aka aspergillus fumigatus)
C: aspergillus asperus (aka aspergillus asper)
D: aspergillus nidulans (aspergillus nidulans (eidam) g. winter, 1884) (aka aspergillus nidulans)
E: aspergillus cerealis
F: None of the above. | [B] |
<Instruct>: Given the context 'The activity was characterized using a recombinant protein produced by Pichiapastoris.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [pichiapastoris]
<Options>: A: pichia pseudopastoris (aka komagataella pseudopastoris)
B: pichia pastoris (aka komagataella pastoris)
C: issatchenkia terricola (aka pichia terricola)
D: pichia galeiformis (aka pichia manshurica)
E: pichia meyerae (aka cyberlindnera meyerae)
F: None of the above. | [B] |
<Instruct>: Given the context 'The metalloreductase FreB is involved in adaptation of Aspergillus fumigatus to iron starvation.
Aspergillus fumigatus employs two high affinity iron uptake mechanisms, siderophore mediated iron uptake and reductive iron assimilation (RIA).', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [aspergillus fumigatus]
<Options>: A: aspergillus aerius
B: aspergillus neoellipticus (aka aspergillus fumigatus)
C: aspergillus aureus
D: aspergillus asperus (aka aspergillus asper)
E: aspergillus nidulellus (aka aspergillus nidulans)
F: None of the above. | [B] |
<Instruct>: Given the context 'The A. fumigatus genome encodes 15 putative metalloreductases (MR) but the ferrireductasesinvolved in RIA remained elusive so far.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [a. fumigatus]
<Options>: A: aspergillus fumigatiaffinis
B: neosartorya fumigata (aka aspergillus fumigatus)
C: aspergillus aureus
D: aspergillus terreus (aspergillus terrestris) (aka aspergillus terreus)
E: aspergillus rubrum (aka aspergillus ruber)
F: None of the above. | [B] |
<Instruct>: Given the context 'This study also revealed that loss of copper-independent siderophore-mediated iron uptake increases sensitivity of A. fumigatus to copper starvation due to copper-dependence of RIA.
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [a. fumigatus]
<Options>: A: aspergillus fumigatiaffinis
B: aspergillus oryzae (aspergillus oryzae (ahlb.) cohn, 1884) (aka aspergillus oryzae)
C: aspergillus asper (aspergillus asperus) (aka aspergillus asper)
D: aspergillus neoellipticus (aka aspergillus fumigatus)
E: aspergillus aerius
F: None of the above. | [D] |
<Instruct>: Given the context 'Expression and functional characterisation of TNC, a high-affinity nickel transporter from Neurospora crassa.
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [neurospora crassa]
<Options>: A: neurospora terricola
B: columnea crassa
C: neurospora terricola fgsc 1889
D: chrysonilia crassa (aka neurospora crassa)
E: tryella crassa
F: None of the above. | [D] |
<Instruct>: Given the context 'Expression and functional characterisation of TNC, a high-affinity nickel transporter from Neurospora crassa.
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [neurospora crassa]
<Options>: A: columnea crassa
B: neurospora terricola fgsc 1889
C: neurospora terricola
D: tryella crassa
E: None of the above. | [E] |
<Instruct>: Given the context 'Our previous in silico studies identified a high-affinity nickel transporter,TNC, from the metal transportome of Neurospora crassa.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [neurospora crassa]
<Options>: A: neurospora nigeriensis
B: tinocladia crassa
C: neocosmospora crassa (aka fusarium crassum)
D: columnea crassa
E: chrysonilia crassa (aka neurospora crassa)
F: None of the above. | [E] |
<Instruct>: Given the context 'A knockout mutant of the tnc gene in N. crassa failed to transport nickel, showed phenotypic growth defects and diminished urease activity under physiological levels of nickel.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [n. crassa]
<Options>: A: neocosmospora crassa (aka fusarium crassum)
B: chrysonilia crassa (aka neurospora crassa)
C: nansenia crassa
D: noronhia crassiramosa
E: crassiana crassa (aka unio crassus)
F: None of the above. | [B] |
<Instruct>: Given the context 'Heterologous complementation of Schizosaccharomyces pombe nickel uptake mutant by TNC further substantiates its nickel transport function.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [schizosaccharomyces pombe]
<Options>: A: schizosaccharomyces pombe oy26
B: sphaeromyxa zaharoni
C: fission yeast (aka schizosaccharomyces pombe)
D: schizosaccharomyces japonicus (schizosaccharomyces japonicus var. versatilis) (aka schizosaccharomyces japonicus)
E: schizosaccharomyces lindneri
F: None of the above. | [C] |
<Instruct>: Given the context 'Transcriptional analysis of the nickel transporter encoding gene, tnc in N. crassa by qRT-PCR showed its constitutive expression in various phases of its life cycle.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [n. crassa]
<Options>: A: neocosmospora crassa (aka fusarium crassum)
B: nicotiana benthamiana
C: napothera crassa (aka gypsophila crassa)
D: neurospora crassa (chrysonilia crassa) (aka neurospora crassa)
E: crassiana crassa (aka unio crassus)
F: None of the above. | [D] |
<Instruct>: Given the context 'Immunolocalisation data suggested that TNC is distributed in the plasma membrane of N. crassa.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [n. crassa]
<Options>: A: norix crassus
B: argis crassa (nectocrangon crassa) (aka argis crassa)
C: nautarachna crassa (delmea crassa) (aka nautarachna crassa)
D: neurospora crassa (chrysonilia crassa) (aka neurospora crassa)
E: nansenia crassa
F: None of the above. | [D] |
<Instruct>: Given the context 'Thus, the present study establishes TNC as a functional plasma membrane nickel transporter necessary for physiological acquisition of nickel in the multicellular fungi N. crassa.
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [n. crassa]
<Options>: A: neocosmospora crassa (aka fusarium crassum)
B: neurospora crassa (chrysonilia crassa) (aka neurospora crassa)
C: noronhia crassiramosa
D: nitrosomonas nitrosa
E: nansenia crassa
F: None of the above. | [B] |
<Instruct>: Given the context 'The effects of dsRNA mycoviruses on growth and murine virulence of Aspergillus fumigatus.
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [aspergillus fumigatus]
<Options>: A: aspergillus aureus
B: aspergillus cerealis
C: aspergillus nidulans (aspergillus nidulans (eidam) g. winter, 1884) (aka aspergillus nidulans)
D: sartorya fumigata (aka aspergillus fumigatus)
E: eurotium oryzae (aka aspergillus oryzae)
F: None of the above. | [D] |
<Instruct>: Given the context 'Some isolates of the opportunistic human pathogenic fungus Aspergillus fumigatus are known to be infected with mycoviruses.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [human; aspergillus fumigatus]
<Options>: A: aspergillus terreus (aspergillus terrestris) (aka aspergillus terreus)
B: pediculus humanus (human louse) (aka pediculus humanus)
C: sphaeria humana (aka sordaria humana)
D: human (aka homo sapiens)
E: cardium humanum (aka glossus humanus)
F: aspergillus aureus
G: neandertal man (aka homo sapiens neanderthalensis)
H: aspergillus nidulans (aspergillus nidulans (eidam) g. winter, 1884) (aka aspergillus nidulans)
I: aspergillus rubrum (aka aspergillus ruber)
J: sartorya fumigata (aka aspergillus fumigatus)
K: None of the above. | [D; J] |
<Instruct>: Given the context 'Some isolates of the opportunistic human pathogenic fungus Aspergillus fumigatus are known to be infected with mycoviruses.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [human; aspergillus fumigatus]
<Options>: A: glossus humanus (cardium humanum) (aka glossus humanus)
B: carcharhinus humani
C: aspergillus nidulellus (aka aspergillus nidulans)
D: aspergillus neoellipticus (aka aspergillus fumigatus)
E: aspergillus rubrum (aka aspergillus ruber)
F: human (aka homo sapiens)
G: aspergillus aureus
H: macrobiotus sapiens
I: human body louse (aka pediculus humanus corporis)
J: aspergillus cerealis
K: None of the above. | [F; D] |
<Instruct>: Given the context 'Through curing virus-infected A. fumigatus isolates by cycloheximide treatment and transfecting virus-free isolates with purified virus, as checked by RT-PCR, isogenic virus-free and virus-infected lines of the fungus were generated whose phenotypes and growth have been directly compared.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [a. fumigatus]
<Options>: A: aspergillus rubrum (aka aspergillus ruber)
B: aspergillus terreus (aspergillus terrestris) (aka aspergillus terreus)
C: aspergillus aureus
D: aspergillus oryzae (aspergillus oryzae (ahlb.) cohn, 1884) (aka aspergillus oryzae)
E: sartorya fumigata (aka aspergillus fumigatus)
F: None of the above. | [E] |
<Instruct>: Given the context 'Mycovirus infection of A. fumigatus with either the chrysovirus or the partitivirus resulted in significant aberrant phenotypic alterations and attenuation of growth of the fungus but had no effect on susceptibility to common antifungals.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [a. fumigatus]
<Options>: A: aspergillus oryzae (aspergillus oryzae (ahlb.) cohn, 1884) (aka aspergillus oryzae)
B: aspergillus aureus
C: aspergillus nidulellus (aka aspergillus nidulans)
D: aspergillus aerius
E: aspergillus fumigatus (aspergillus fumigatus var. ellipticus) (aka aspergillus fumigatus)
F: None of the above. | [E] |
<Instruct>: Given the context 'Chrysovirus infection of A. fumigatus caused no significant alterations to murine pathogenicity.
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [a. fumigatus]
<Options>: A: aspergillus terreus (aspergillus terrestris) (aka aspergillus terreus)
B: aspergillus nidulans (eidam) g. winter, 1884 (aka aspergillus nidulans)
C: aspergillus rubrum (aka aspergillus ruber)
D: aspergillus cerealis
E: sartorya fumigata (aka aspergillus fumigatus)
F: None of the above. | [E] |
<Instruct>: Given the context 'Identification and characterization of the cysteine protease inhibitor gene MdCPI from Musca domestica.
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [musca domestica]
<Options>: A: musca domestica (house fly) (aka musca domestica)
B: muscaphis musci
C: musca comtus (aka xanthandrus comtus)
D: musca (aka musca <genus>)
E: musca albina
F: None of the above. | [A] |
<Instruct>: Given the context 'Cysteine proteinase inhibitors (CPIs) are involved in many vital cellular processes such as signalling pathways, apoptosis, immune response and development; however, no CPIs have yet been reported from the housefly Musca domestica.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [housefly; musca domestica]
<Options>: A: musca pipiens (aka syritta pipiens)
B: musca idessa (aka graphomya idessa)
C: musca asiatica
D: apis hypnorum (aka bombus hypnorum)
E: house fly (aka musca domestica)
F: muscaphis musci
G: house cricket (aka acheta domesticus)
H: hippo fly (aka tabanus biguttatus)
I: fruit fly (aka drosophila melanogaster)
J: None of the above. | [E; E] |
<Instruct>: Given the context 'Cysteine proteinase inhibitors (CPIs) are involved in many vital cellular processes such as signalling pathways, apoptosis, immune response and development; however, no CPIs have yet been reported from the housefly Musca domestica.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [housefly; musca domestica]
<Options>: A: musca oleae (aka bactrocera oleae)
B: tomato fruitworm (aka helicoverpa zea)
C: musca <genus> (musca) (aka musca <genus>)
D: musca comtus (aka xanthandrus comtus)
E: house fly (aka musca domestica)
F: horseflies (aka tabanidae)
G: house cricket (aka acheta domesticus)
H: autumn house fly (aka musca autumnalis)
I: musca furta (aka stegana furta)
J: None of the above. | [E; E] |
<Instruct>: Given the context 'Here we report the isolation and characterization of a housefly CPI gene designated MdCPI.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [housefly]
<Options>: A: house flies (aka muscidae)
B: apis lucorum (aka bombus lucorum)
C: house fly (aka musca domestica)
D: honeybee (aka apis mellifera)
E: fruit fly (aka drosophila melanogaster)
F: None of the above. | [C] |
<Instruct>: Given the context 'Here we report the isolation and characterization of a housefly CPI gene designated MdCPI.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [housefly]
<Options>: A: fruit fly (aka drosophila melanogaster)
B: apis lucorum (aka bombus lucorum)
C: house flies (aka muscidae)
D: honeybee (aka apis mellifera)
E: None of the above. | [E] |
<Instruct>: Given the context 'Protein alignment demonstrated a high homology to that of Sarcophaga crassipalpis (identity = 51%).', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [sarcophaga crassipalpis]
<Options>: A: dasumia crassipalpis
B: sarcophaga crassipalpis (sarcophaga (parasarcophaga) crassipalpis) (aka sarcophaga crassipalpis)
C: pardosa crassipalpis
D: stehlikiana crassa
E: myopina crassipalpis
F: None of the above. | [B] |
<Instruct>: Given the context 'Phylogenetic analysis suggested that all CPIs from dipterans, including the housefly, belong to the I25A family and may be descended from a single common ancestor.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [housefly]
<Options>: A: autumn house fly (aka musca autumnalis)
B: honeybee (aka apis mellifera)
C: apis hypnorum (aka bombus hypnorum)
D: musca domestica (house fly) (aka musca domestica)
E: bactrocera (bactrocera) melanogaster (aka bactrocera melanogaster)
F: None of the above. | [D] |
<Instruct>: Given the context 'The gene was expressed in and purified from Escherichia coli.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [escherichia coli]
<Options>: A: bacterium coli (aka escherichia coli)
B: escherichia coli 99.1793
C: escherichia
D: 'escherichia faecalis' (aka escherichia faecalis)
E: entamoeba coli
F: None of the above. | [A] |
<Instruct>: Given the context 'Suitability of different media for in vitro cultivation of the ruminal protozoa species Entodinium caudatum, Eudiplodinium maggii, and Epidinium ecaudatum.
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [entodinium caudatum; eudiplodinium maggii; epidinium ecaudatum]
<Options>: A: entodinium furca
B: epidinium ecaudatum
C: plocamium maggsiae
D: potamotrygon magdalenae (magdalena river stingray) (aka potamotrygon magdalenae)
E: epidendrum insulanum
F: entodinium caudatum
G: elaeocarpus gadgilii
H: eulimnadia magdalenensis
I: epidendrum fucatum (aka encyclia fucata)
J: epidendrum diffusum
K: colletotrichum caudatum (ellisiella caudata) (aka colletotrichum caudatum)
L: entodinium nanellum
M: epidendrum trialatum
N: eudiplodinium maggii
O: lycoperdon caudatum
P: None of the above. | [F; N; B] |
<Instruct>: Given the context 'Suitability of different media for in vitro cultivation of the ruminal protozoa species Entodinium caudatum, Eudiplodinium maggii, and Epidinium ecaudatum.
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [entodinium caudatum; eudiplodinium maggii; epidinium ecaudatum]
<Options>: A: entodinium caudatum
B: lycoperdon caudatum
C: paramecium caudatum
D: eudiplodinium maggii
E: epidendrum radiatum (aka prosthechea radiata)
F: epidendrum trialatum
G: elymnias caudata
H: epidendrum coronatum
I: epidinium ecaudatum
J: petalidium giessii
K: elachista magidina
L: farysia magdalena
M: pythium caudatum (lagenidium caudatum g.l. barron 1976) (aka pythium caudatum)
N: plocamium maggsiae
O: epidendrum cristatum
P: None of the above. | [A; D; I] |
<Instruct>: Given the context 'Suitability of different media for in vitro cultivation of the ruminal protozoa species Entodinium caudatum, Eudiplodinium maggii, and Epidinium ecaudatum.
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [entodinium caudatum; eudiplodinium maggii; epidinium ecaudatum]
<Options>: A: eufriesea magrettii
B: epidendrum diffusum
C: epidendrum cristatum
D: epidendrum anisatum
E: petalidium giessii
F: entandrophragma caudatum (pseudocedrela caudata) (aka entandrophragma caudatum)
G: epidendrum trialatum
H: entodinium furca
I: tricladium caudatum
J: farysia magdalena
K: epirinus pygidialis
L: epidendrum caudatum (aka brassia caudata)
M: eudiplodinium maggii
N: epidinium ecaudatum
O: entodinium caudatum
P: None of the above. | [O; M; N] |
<Instruct>: Given the context 'Entodinium caudatum and Eudiplodinium maggii were grown anaerobically in 50-ml flasks for 32 days in Caudatum-type (C), Kisidayova (K) or Dehority (M) medium.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [entodinium caudatum; eudiplodinium maggii]
<Options>: A: entodinium caudatum
B: elaeocarpus gadgilii
C: tetroplon caudatum
D: elachista magidina
E: epidendrum caudatum (aka brassia caudata)
F: diplazium caudatum
G: euptilocladia magruderi
H: gigiella milledgei
I: eudiplodinium maggii
J: ellisiella caudata (aka colletotrichum caudatum)
K: None of the above. | [A; I] |
<Instruct>: Given the context 'Entodinium caudatum and Eudiplodinium maggii were grown anaerobically in 50-ml flasks for 32 days in Caudatum-type (C), Kisidayova (K) or Dehority (M) medium.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [entodinium caudatum; eudiplodinium maggii]
<Options>: A: periaeschna magdalena
B: eudiplodinium maggii
C: diplazium caudatum
D: entodinium caudatum
E: elachista magidina
F: platphalonidia magdalenae (platphalonia magdalenae) (aka platphalonidia magdalenae)
G: entandrophragma caudatum (pseudocedrela caudata) (aka entandrophragma caudatum)
H: enchelis caudata (aka spirostomum caudatum)
I: potamotrygon magdalenae (magdalena river stingray) (aka potamotrygon magdalenae)
J: elymnias caudata
K: None of the above. | [D; B] |
<Instruct>: Given the context 'On day 32, in media K and M, E. caudatum cell counts were high with 5.6x10(3) and 7.8x10(3) mL(-1), respectively, and the proportion of dead cells was low with 0.6 and 1.4%, respectively.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [e. caudatum]
<Options>: A: lycopodium caudatum (aka selaginella caudata)
B: eriosema cordatum
C: entandrophragma caudatum (pseudocedrela caudata) (aka entandrophragma caudatum)
D: colpodidium caudatum
E: entodinium caudatum
F: None of the above. | [E] |
<Instruct>: Given the context 'E. maggii concentrations when grown in medium M and C were 2.7x10(3) and 2.4x10(3) mL(-1), respectively, with 3.9 and 14.1% dead cells.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [e. maggii]
<Options>: A: eudiplodinium maggii
B: erica frigida
C: tetragma gei
D: euptilocladia magruderi
E: glugea thunni
F: None of the above. | [A] |
<Instruct>: Given the context 'Medium M, which favoured growth of both protozoa species, was tested again and Epidinium ecaudatum was included.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [epidinium ecaudatum]
<Options>: A: epidendrum trialatum
B: epidendrum caudatum (aka brassia caudata)
C: epidendrum diffusum
D: cyclidium ecaudatum (aka colpoda ecaudata)
E: epidinium ecaudatum
F: None of the above. | [E] |
<Instruct>: Given the context 'Average cell concentrations were 10.0, 0.8 and 0.5x10(3) mL(-1) for E. caudatum, E. maggii, and E. ecaudatum, respectively.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [e. caudatum; e. maggii; e. ecaudatum]
<Options>: A: euptilocladia magruderi
B: eryngium echinatum
C: pseudocedrela caudata (aka entandrophragma caudatum)
D: euura fagi (nematus fagi) (aka euura fagi)
E: epsilonema dentatum
F: entamoeba equi
G: eudiplodinium maggii
H: entodinium caudatum
I: epidinium ecaudatum
J: myosaccium ecaude
K: eriosema dregei
L: diplazium caudatum
M: eriosema cordatum
N: canarium caudatum
O: None of the above. | [H; G; I] |
<Instruct>: Given the context 'Average cell concentrations were 10.0, 0.8 and 0.5x10(3) mL(-1) for E. caudatum, E. maggii, and E. ecaudatum, respectively.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [e. caudatum; e. maggii; e. ecaudatum]
<Options>: A: eriosema glomeratum (rhynchosia glomerata) (aka eriosema glomeratum)
B: eudiplodinium maggii
C: canarium caudatum
D: eriosema dregei
E: euura fagi (nematus fagi) (aka euura fagi)
F: epidinium ecaudatum fasciculus
G: lycopodium caudatum (aka selaginella caudata)
H: epeira mengii (aka metellina mengei)
I: epidinium ecaudatum
J: eriosema cordatum
K: tetroplon caudatum
L: epimedium fangii
M: lycoperdon caudatum
N: entodinium caudatum
O: None of the above. | [N; B; I] |
<Instruct>: Given the context 'Average cell concentrations were 10.0, 0.8 and 0.5x10(3) mL(-1) for E. caudatum, E. maggii, and E. ecaudatum, respectively.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [e. caudatum; e. maggii; e. ecaudatum]
<Options>: A: eudiplodinium maggii
B: entodinium caudatum
C: tetragma gei
D: epidendrum coronatum
E: elymnias caudata
F: canarium caudatum
G: epidinium ecaudatum
H: epidendrum caudatum (aka brassia caudata)
I: eriogonum greggii
J: erythroxylum emarginatum
K: eryngium glomeratum
L: ellisiella caudata (aka colletotrichum caudatum)
M: eriosema dregei
N: glugoides intestinalis
O: eriosema cordatum
P: None of the above. | [B; A; G] |
<Instruct>: Given the context 'Intestinal ciliate composition found in the feces of the Turk rahvan horse Equus caballus, Linnaeus 1758.
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [turk rahvan horse; equus caballus]
<Options>: A: common horsetail (aka equisetum arvense)
B: equus hydruntinus (european ass) (aka equus hydruntinus)
C: equus przewalskii forma caballus (aka equus caballus)
D: equus dalianensis
E: european ass (aka equus hydruntinus)
F: equus zebra hartmanii (aka equus zebra hartmannae)
G: equus africanus (aka equus asinus africanus)
H: equus caballus ferus (aka equus ferus)
I: eques
J: None of the above. | [C; C] |
<Instruct>: Given the context 'Intestinal ciliate composition found in the feces of the Turk rahvan horse Equus caballus, Linnaeus 1758.
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [turk rahvan horse; equus caballus]
<Options>: A: european ass (aka equus hydruntinus)
B: common horsetail (aka equisetum arvense)
C: eques
D: equus caballus ferus (aka equus ferus)
E: equus dalianensis
F: equus africanus (aka equus asinus africanus)
G: equus hydruntinus (european ass) (aka equus hydruntinus)
H: equus zebra hartmanii (aka equus zebra hartmannae)
I: None of the above. | [I; I] |
<Instruct>: Given the context 'Intestinal ciliate composition found in the feces of the Turk rahvan horse Equus caballus, Linnaeus 1758.
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [turk rahvan horse; equus caballus]
<Options>: A: equus hydruntinus (european ass) (aka equus hydruntinus)
B: przewalski's horse (aka equus przewalskii)
C: equus caballus przewalskii (aka equus przewalskii)
D: equus ferus (equus caballus ferus) (aka equus ferus)
E: horse (aka equus caballus)
F: equus (sussemionus) ovodovi (aka equus ovodovi)
G: equus neogeus (equus (amerhippus) neogeus) (aka equus neogeus)
H: donkey (aka equus asinus)
I: horses (aka equidae)
J: None of the above. | [E; E] |
<Instruct>: Given the context 'Species composition and distribution of large intestinal ciliates were investigated in the feces from 15 Turk rahvan horses, living in the vicinity of Izmir, Turkey.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [turk rahvan horses]
<Options>: A: equus ferus przewalskii (aka equus przewalskii)
B: equus (sussemionus) ovodovi (aka equus ovodovi)
C: equus lambei (yukon wild horse) (aka equus lambei)
D: horse (aka equus caballus)
E: equus dalianensis
F: None of the above. | [D] |
<Instruct>: Given the context 'This is the first report on intestinal ciliates in Turk rahvan horses and no previously unknown species were observed.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [turk rahvan horses]
<Options>: A: horses (aka equidae)
B: equus zebra hartmanii (aka equus zebra hartmannae)
C: equus hydruntinus (european ass) (aka equus hydruntinus)
D: equus przewalskii forma caballus (aka equus caballus)
E: equus dalianensis
F: None of the above. | [D] |
<Instruct>: Given the context 'No ciliates were observed in 2 horses.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [horses]
<Options>: A: yukon wild horse (aka equus lambei)
B: sussemionus (aka equus)
C: equus africanus (aka equus asinus africanus)
D: donkey (aka equus asinus)
E: equine (aka equus caballus)
F: None of the above. | [E] |
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