instruction stringlengths 209 946 | input stringlengths 96 1.45k | response stringlengths 3 12 |
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<Instruct>: Given the context 'Growth inhibition of Beauveria bassiana by bacteria isolated from the cuticular surface of the corn leafhopper, Dalbulus maidis and the planthopper, Delphacodes kuscheli, two important vectors of maize pathogens.
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [beauveria bassiana; corn leafhopper; dalbulus maidis; delphacodes kuscheli]
<Options>: A: beauveria neobassiana
B: baetis maurus
C: loxostege lepidalis (prorasea lepidalis) (aka loxostege lepidalis)
D: corn leafhopper (aka dalbulus maidis)
E: cornus alpina
F: ectemnorhinus kuscheli
G: falklandius kuscheli
H: beauveria thailandica
I: bassiana
J: malthodes maurus
K: trigonopterus kuscheli
L: penicillium bassianum (aka beauveria bassiana)
M: delphacodes kuscheli
N: beauveria majiangensis
O: klapopteryx kuscheli
P: african cotton leafworm (aka spodoptera littoralis)
Q: amphioplus daleus
R: trichogramma maidis
S: podarcis tiliguerta (lacerta tiliguerta) (aka podarcis tiliguerta)
T: None of the above. | [L; D; D; M] |
<Instruct>: Given the context 'Growth inhibition of Beauveria bassiana by bacteria isolated from the cuticular surface of the corn leafhopper, Dalbulus maidis and the planthopper, Delphacodes kuscheli, two important vectors of maize pathogens.
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [beauveria bassiana; corn leafhopper; dalbulus maidis; delphacodes kuscheli]
<Options>: A: beauveria asiatica
B: dalea radicans
C: podarcis tiliguerta (lacerta tiliguerta) (aka podarcis tiliguerta)
D: small brown planthopper (aka laodelphax striatellus)
E: amphioplus daleus
F: beauveria thailandica
G: beauveria bassiana bb 9205
H: delphacodes kuscheli
I: dendroaspis viridis (western green mamba) (aka dendroaspis viridis)
J: rice weevil (aka sitophilus oryzae)
K: corn earworm (aka helicoverpa zea)
L: beauveria bassiana var. bassiana (aka beauveria bassiana)
M: diaphorus maurus
N: etheophanus kuscheli
O: delphacodes sagae
P: corn leafhopper (aka dalbulus maidis)
Q: falklandius kuscheli
R: beauveria australis
S: tagalinus kuscheli
T: None of the above. | [L; P; P; H] |
<Instruct>: Given the context 'Growth inhibition of Beauveria bassiana by bacteria isolated from the cuticular surface of the corn leafhopper, Dalbulus maidis and the planthopper, Delphacodes kuscheli, two important vectors of maize pathogens.
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [beauveria bassiana; corn leafhopper; dalbulus maidis; delphacodes kuscheli]
<Options>: A: discoelius zonalis
B: beauveria pseudobassiana
C: rhampholeon viridis
D: isopus kuscheli
E: rice weevil (aka sitophilus oryzae)
F: phyllosticta cornicola (aka sphaerulina cornicola)
G: bassia kingiana (aka madhuca kingiana)
H: beauveria bassiana bb 9205
I: phyllachora maydis
J: dalea mollis
K: dalbulus cimmyti
L: aphelinus maidis
M: klapopteryx kuscheli
N: beauveria sinensis
O: trigonopterus kuscheli
P: beet leafhopper (aka neoaliturus tenellus)
Q: maize leafhopper (aka dalbulus maidis)
R: spicaria bassiana (aka beauveria bassiana)
S: delphacodes kuscheli
T: None of the above. | [R; Q; Q; S] |
<Instruct>: Given the context 'Growth inhibition of Beauveria bassiana by bacteria isolated from the cuticular surface of the corn leafhopper, Dalbulus maidis and the planthopper, Delphacodes kuscheli, two important vectors of maize pathogens.
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [beauveria bassiana; corn leafhopper; dalbulus maidis; delphacodes kuscheli]
<Options>: A: delphacodes kuscheli
B: delphax orientalis
C: corn leafhopper (aka dalbulus maidis)
D: phyllachora maydis
E: bassia kingiana (aka madhuca kingiana)
F: aphelinus maidis
G: rhampholeon viridis
H: beauveria pseudobassiana
I: archicorynus kuscheli
J: rice water weevil (aka lissorhoptrus oryzophilus)
K: spicaria bassiana (aka beauveria bassiana)
L: trichogramma maidis
M: klapopteryx kuscheli
N: beauveria oryzae (aka tritirachium oryzae)
O: baetis maurus
P: beauveria australis
Q: falklandius kuscheli
R: small brown planthopper (aka laodelphax striatellus)
S: beet leafhopper (aka neoaliturus tenellus)
T: None of the above. | [K; C; C; A] |
<Instruct>: Given the context 'The phytosanitary importance of the corn leafhopper, Dalbulus maidis (De Long and Wolcott) (Hemiptera: Cicadellidae) and the planthopper, Delphacodes kuscheli Fennah (Hemiptera: Delphacidae) lies in their ability to transmit phloem-associated plant pathogens, mainly viruses and mollicutes, and to cause considerable mechanical damage to corn plants during feeding and oviposition.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [corn]
<Options>: A: avenula agropyroides (aka helictochloa agropyroides)
B: agrococcus
C: agrococcus terreus
D: maize (aka zea mays)
E: corn cyst nematode (aka heterodera zeae)
F: None of the above. | [D] |
<Instruct>: Given the context 'The present work aims to understand interactions between the entomopathogenic fungus Beauveria bassiana (Balsamao-Crivelli) Vuillemin (Hypocreales: Cordycipitaceae) and bacterial antagonists isolated from the cuticular surface of D. maidis and D. kuscheli.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [beauveria bassiana; d. maidis; d. kuscheli]
<Options>: A: daldinia simulans
B: maize leafhopper (aka dalbulus maidis)
C: daphne mauritanica
D: etheophanus kuscheli
E: delphacodes kuscheli
F: beauveria oryzae (aka tritirachium oryzae)
G: dimorphandra dissimilis
H: dictyamoeba vorax
I: beauveria thailandica
J: botrytis bassiana (aka beauveria bassiana)
K: bassiana
L: dendrolagus dorianus (doria's tree kangaroo) (aka dendrolagus dorianus)
M: didymella pteridis
N: beauveria asiatica
O: drosophila kuhao
P: None of the above. | [J; B; E] |
<Instruct>: Given the context 'The present work aims to understand interactions between the entomopathogenic fungus Beauveria bassiana (Balsamao-Crivelli) Vuillemin (Hypocreales: Cordycipitaceae) and bacterial antagonists isolated from the cuticular surface of D. maidis and D. kuscheli.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [beauveria bassiana; d. maidis; d. kuscheli]
<Options>: A: trichogramma maidis
B: delphacodes kuscheli
C: diaphorus maurus
D: hirudo viridis (aka dalyellia viridis)
E: cordyceps bassiana (aka beauveria bassiana)
F: beauveria thailandica
G: beauveria australis
H: dictyamoeba vorax
I: dunaliella viridis
J: maize leafhopper (aka dalbulus maidis)
K: klapopteryx kuscheli
L: beauveria neobassiana
M: ectemnorhinus kuscheli
N: drosophila kuhao
O: beauveria pseudobassiana
P: None of the above. | [E; J; B] |
<Instruct>: Given the context 'The present work aims to understand interactions between the entomopathogenic fungus Beauveria bassiana (Balsamao-Crivelli) Vuillemin (Hypocreales: Cordycipitaceae) and bacterial antagonists isolated from the cuticular surface of D. maidis and D. kuscheli.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [beauveria bassiana; d. maidis; d. kuscheli]
<Options>: A: desmarestia viridis
B: beauveria bassiana bb 9205
C: bassiana
D: dorylaimus stagnalis
E: daphne mauritanica
F: rhopalosiphum maidis (corn leaf aphid) (aka rhopalosiphum maidis)
G: drosophila kuhao
H: penicillium bassianum (aka beauveria bassiana)
I: delphacodes kuscheli
J: drosophila bromelioides
K: zelandobius kuscheli
L: beauveria oryzae (aka tritirachium oryzae)
M: beauveria bassiana d1-5
N: dichotomaria viridis
O: corn leafhopper (aka dalbulus maidis)
P: None of the above. | [H; O; I] |
<Instruct>: Given the context 'A total of 155 bacterial isolates were recovered from the insect's cuticle and tested against B. bassiana.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [b. bassiana]
<Options>: A: beauveria pseudobassiana
B: bassia blackiana (aka sclerolaena blackiana)
C: bassia iranica (aka bassia odontoptera)
D: botrytis bassiana (aka beauveria bassiana)
E: bassia diffusa (aka chenolea diffusa)
F: None of the above. | [D] |
<Instruct>: Given the context 'Ninety-one out of 155 strains inhibited the growth of B. bassiana.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [b. bassiana]
<Options>: A: beauveria bassiana d1-5
B: penicillium bassianum (aka beauveria bassiana)
C: bassiana
D: bassia blackiana (aka sclerolaena blackiana)
E: burkholderia diffusa
F: None of the above. | [B] |
<Instruct>: Given the context 'Bacterial strains isolated from D. maidis were significantly more antagonistic against B. bassiana than those isolates from D. kuscheli.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [d. maidis; b. bassiana; d. kuscheli]
<Options>: A: trichogramma maidis
B: maize leafhopper (aka dalbulus maidis)
C: blakistonia bassi
D: ardistomis viridis
E: bassiana
F: delphacodes kuscheli
G: daphnimorpha kudoi (wikstroemia kudoi) (aka daphnimorpha kudoi)
H: doloessa viridis
I: doris krebsii (aka dendrodoris krebsii)
J: drosophila bromelioides
K: beauveria oryzae (aka tritirachium oryzae)
L: ectemnorhinus kuscheli
M: dacus dissimilis
N: beauveria bassiana (beauveria bassiana var. bassiana) (aka beauveria bassiana)
O: bassia diffusa (aka chenolea diffusa)
P: None of the above. | [B; N; F] |
<Instruct>: Given the context 'Bacterial strains isolated from D. maidis were significantly more antagonistic against B. bassiana than those isolates from D. kuscheli.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [d. maidis; b. bassiana; d. kuscheli]
<Options>: A: corn leafhopper (aka dalbulus maidis)
B: delphacodes kuscheli
C: rhampholeon viridis
D: monarda bradburiana
E: begonia boisiana
F: etheophanus kuscheli
G: dorcus koreanus
H: didymella pteridis
I: bassiana
J: bassia diffusa (aka chenolea diffusa)
K: diplazium kuoi
L: ardistomis viridis
M: diaphorus maurus
N: lissorhoptrus kuscheli
O: cordyceps bassiana (aka beauveria bassiana)
P: None of the above. | [A; O; B] |
<Instruct>: Given the context 'Bacterial strains isolated from D. maidis were significantly more antagonistic against B. bassiana than those isolates from D. kuscheli.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [d. maidis; b. bassiana; d. kuscheli]
<Options>: A: doloessa viridis
B: desmarestia viridis
C: corn leafhopper (aka dalbulus maidis)
D: ectemnorhinus kuscheli
E: etheophanus kuscheli
F: cordyceps bassiana (aka beauveria bassiana)
G: dendrolagus dorianus (doria's tree kangaroo) (aka dendrolagus dorianus)
H: delosperma nakurense
I: caballeronia insecticola (burkholderia insecticola) (aka caballeronia insecticola)
J: delphacodes kuscheli
K: dichotomaria viridis
L: diaphorus maurus
M: beauveria bassiana d1-5
N: bassia diffusa (aka chenolea diffusa)
O: bassia iranica (aka bassia odontoptera)
P: None of the above. | [C; F; J] |
<Instruct>: Given the context 'Among the most effective antagonistic strains, six isolates of Bacillus thuringiensis Berliner (Bacillales: Bacillaeae (after B. subtilis)), one isolate of B. mycoides Flugge, eight isolates of B. megaterium de Bary, five isolates of B.pumilus Meyer and Gottheil, one isolate of B. licheniformis (Weigmann) Chester, and four isolates of B. subtilis (Ehrenberg) Cohn were identified.
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [bacillus thuringiensis; b. subtilis; b. mycoides; b. megaterium]
<Options>: A: bacillus aerophilus
B: grass mildew (aka blumeria graminis)
C: bacillus thuringiensis bt18679
D: mycoplasmoides
E: aquimarina megaterium
F: bacillus albus
G: bacillus thuringiensis bt407
H: bacillus mycoides flugge 1886 (approved lists 1980) (aka bacillus mycoides)
I: bacillus natto (aka bacillus subtilis)
J: bacillus thuringiensis (bacillus thuringiensis berliner 1915 (approved lists 1980)) (aka bacillus thuringiensis)
K: bacillus thuringiensis hd-789
L: bacillus mesentericus (aka bacillus subtilis)
M: bacillus (aka bacillus <firmicutes>)
N: bombus festivus
O: mycoplasma mycoides ("microbe de la peripneumonie" nocard and roux 1898) (aka mycoplasma mycoides)
P: bacillus thuringiensis fc2
Q: blastomyces dermatitidis (blastomycoides dermatitidis) (aka blastomyces dermatitidis)
R: bacillus mobilis
S: bacillus megaterium (aka priestia megaterium)
T: graphium megarus (papilio megarus) (aka graphium megarus)
U: None of the above. | [J; I; H; S] |
<Instruct>: Given the context 'Among the most effective antagonistic strains, six isolates of Bacillus thuringiensis Berliner (Bacillales: Bacillaeae (after B. subtilis)), one isolate of B. mycoides Flugge, eight isolates of B. megaterium de Bary, five isolates of B.pumilus Meyer and Gottheil, one isolate of B. licheniformis (Weigmann) Chester, and four isolates of B. subtilis (Ehrenberg) Cohn were identified.
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [bacillus thuringiensis; b. subtilis; b. mycoides; b. megaterium]
<Options>: A: bacillus mesentericus (aka bacillus subtilis)
B: pleuropneumonia bovis (aka mycoplasma mycoides)
C: bacillus thuringiensis thuringiensis (aka bacillus thuringiensis serovar thuringiensis)
D: bacillus longisporus ('bacillus longisporus') (aka bacillus longisporus)
E: vibrio subtilis (aka bacillus subtilis)
F: bacillus fungorum
G: bacillus megaterium (aka priestia megaterium)
H: bacillus thuringiensis gv. cytolyticus
I: bacillus thuringiensis bt18247
J: bacillus thuringiensis aks-7
K: bacillus (aka bacillus <firmicutes>)
L: burkillia alba (aka burkilliodendron album)
M: bembras megacephala
N: blumeria graminis (erysiphe graminis) (aka blumeria graminis)
O: bacillus medusa (aka bacillus cereus)
P: gemmobacter megaterium
Q: bacillus cereus frankland and frankland 1887 (approved lists 1980) (aka bacillus cereus)
R: bacillus mycoides flugge 1886 (approved lists 1980) (aka bacillus mycoides)
S: bacillus thuringiensis berliner 1915 (approved lists 1980) (aka bacillus thuringiensis)
T: None of the above. | [S; E; R; G] |
<Instruct>: Given the context 'Among the most effective antagonistic strains, six isolates of Bacillus thuringiensis Berliner (Bacillales: Bacillaeae (after B. subtilis)), one isolate of B. mycoides Flugge, eight isolates of B. megaterium de Bary, five isolates of B.pumilus Meyer and Gottheil, one isolate of B. licheniformis (Weigmann) Chester, and four isolates of B. subtilis (Ehrenberg) Cohn were identified.
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [bacillus thuringiensis; b. subtilis; b. mycoides; b. megaterium]
<Options>: A: bacillus medusa (aka bacillus cereus)
B: gemmobacter megaterium
C: bembras megacephala
D: vibrio subtilis (aka bacillus subtilis)
E: bacillus thuringiensis thuringiensis (aka bacillus thuringiensis serovar thuringiensis)
F: bacillus thuringiensis bt18247
G: bacillus megaterium (aka priestia megaterium)
H: bacillus mesentericus (aka bacillus subtilis)
I: bacillus (aka bacillus <firmicutes>)
J: bacillus thuringiensis aks-7
K: bacillus longisporus ('bacillus longisporus') (aka bacillus longisporus)
L: pleuropneumonia bovis (aka mycoplasma mycoides)
M: blumeria graminis (erysiphe graminis) (aka blumeria graminis)
N: bacillus fungorum
O: bacillus cereus frankland and frankland 1887 (approved lists 1980) (aka bacillus cereus)
P: bacillus mycoides flugge 1886 (approved lists 1980) (aka bacillus mycoides)
Q: burkillia alba (aka burkilliodendron album)
R: bacillus thuringiensis gv. cytolyticus
S: None of the above. | [S; D; P; G] |
<Instruct>: Given the context 'Among the most effective antagonistic strains, six isolates of Bacillus thuringiensis Berliner (Bacillales: Bacillaeae (after B. subtilis)), one isolate of B. mycoides Flugge, eight isolates of B. megaterium de Bary, five isolates of B.pumilus Meyer and Gottheil, one isolate of B. licheniformis (Weigmann) Chester, and four isolates of B. subtilis (Ehrenberg) Cohn were identified.
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [bacillus thuringiensis; b. subtilis; b. mycoides; b. megaterium]
<Options>: A: grass mildew (aka blumeria graminis)
B: burkilliodendron
C: bacillus fungorum
D: bombus festivus
E: blastomyces dermatitidis (blastomycoides dermatitidis) (aka blastomyces dermatitidis)
F: gemmobacter megaterium
G: bacillus mycoides flugge 1886 (approved lists 1980) (aka bacillus mycoides)
H: priestia megaterium (bacillus megaterium) (aka priestia megaterium)
I: bacillus medusa (aka bacillus cereus)
J: bacillus pestis (aka yersinia pestis)
K: bacillus cereus var. thuringiensis (aka bacillus thuringiensis)
L: bacillus (aka bacillus <walking sticks>)
M: bacillus aerophilus
N: bacillus thuringiensis bt18247
O: bacillus cereus (bacillus cereus frankland and frankland 1887 (approved lists 1980)) (aka bacillus cereus)
P: bacillus thuringiensis bt407
Q: bacillus thuringiensis gv. cytolyticus
R: bacillus natto (aka bacillus subtilis)
S: sporobolus subtilis
T: asterococcus mycoides (aka mycoplasma mycoides)
U: None of the above. | [K; R; G; H] |
<Instruct>: Given the context 'Among the most effective antagonistic strains, six isolates of Bacillus thuringiensis Berliner (Bacillales: Bacillaeae (after B. subtilis)), one isolate of B. mycoides Flugge, eight isolates of B. megaterium de Bary, five isolates of B.pumilus Meyer and Gottheil, one isolate of B. licheniformis (Weigmann) Chester, and four isolates of B. subtilis (Ehrenberg) Cohn were identified.
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [bacillus thuringiensis; b. subtilis; b. mycoides; b. megaterium]
<Options>: A: graphium megarus (papilio megarus) (aka graphium megarus)
B: bembras megacephala
C: bacillus mesentericus (aka bacillus subtilis)
D: burkilliodendron
E: bacillus fungorum
F: bacillus thuringiensis bt407
G: bacillus tropicus
H: borrelomyces gallinarum (aka mycoplasmopsis gallinarum)
I: bacillus aerophilus
J: sowerbaea subtilis
K: bacillus natto (aka bacillus subtilis)
L: bacillus weihenstephanensis (aka bacillus mycoides)
M: bacillus megaterium (aka priestia megaterium)
N: bacillus cereus (bacillus cereus frankland and frankland 1887 (approved lists 1980)) (aka bacillus cereus)
O: bacillus thuringiensis gv. thuringiensis
P: bacillus cereus var. thuringiensis (aka bacillus thuringiensis)
Q: bombella mellum
R: bacillus amylolyticus (aka paenibacillus amylolyticus)
S: bacillus thuringiensis thuringiensis (aka bacillus thuringiensis serovar thuringiensis)
T: bacillus (aka bacillus <walking sticks>)
U: None of the above. | [P; K; L; M] |
<Instruct>: Given the context 'Among the most effective antagonistic strains, six isolates of Bacillus thuringiensis Berliner (Bacillales: Bacillaeae (after B. subtilis)), one isolate of B. mycoides Flugge, eight isolates of B. megaterium de Bary, five isolates of B.pumilus Meyer and Gottheil, one isolate of B. licheniformis (Weigmann) Chester, and four isolates of B. subtilis (Ehrenberg) Cohn were identified.
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [b.pumilus; b. licheniformis; b. subtilis]
<Options>: A: leucogyrophana lichenicola (aka penttilamyces lichenicola)
B: bacillus longisporus ('bacillus longisporus') (aka bacillus longisporus)
C: bacillus horti
D: bacillus clarus
E: denitrobacillus licheniformis (aka bacillus licheniformis)
F: bacillus (aka bacillus <walking sticks>)
G: bacillus subtilis (bacillus subtilis/bacillus globigii) (aka bacillus subtilis)
H: aphorma lichenoides
I: trollius pumilus
J: bomarea pumila
K: paracraurococcus lichenis
L: conidiobolus lichenicola
M: fellhanera subtilis (bacidia subtilis) (aka fellhanera subtilis)
N: bacillus cereus frankland and frankland 1887 (approved lists 1980) (aka bacillus cereus)
O: bacillus mesentericus (aka bacillus pumilus)
P: None of the above. | [O; E; G] |
<Instruct>: Given the context 'Among the most effective antagonistic strains, six isolates of Bacillus thuringiensis Berliner (Bacillales: Bacillaeae (after B. subtilis)), one isolate of B. mycoides Flugge, eight isolates of B. megaterium de Bary, five isolates of B.pumilus Meyer and Gottheil, one isolate of B. licheniformis (Weigmann) Chester, and four isolates of B. subtilis (Ehrenberg) Cohn were identified.
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [b.pumilus; b. licheniformis; b. subtilis]
<Options>: A: bacillus mesentericus (aka bacillus pumilus)
B: bacillus thuringiensis (bacillus thuringiensis berliner 1915 (approved lists 1980)) (aka bacillus thuringiensis)
C: bacillus longisporus ('bacillus longisporus') (aka bacillus longisporus)
D: bacillus albus
E: lichen globosus (aka sphaerophorus globosus)
F: lichen amylaceus (aka lecanographa amylacea)
G: bacillus pumilus (bacillus aminoglucosidicus) (aka bacillus pumilus)
H: paracoccus lichenicola
I: trollius pumilus
J: bacillus (aka bacillus <firmicutes>)
K: fellhanera subtilis (bacidia subtilis) (aka fellhanera subtilis)
L: denitrobacillus licheniformis (aka bacillus licheniformis)
M: bacillus natto (aka bacillus subtilis)
N: lichen subtilis (aka scytinium subtile)
O: chionobas pumilus (aka paroeneis pumilus)
P: None of the above. | [G; L; M] |
<Instruct>: Given the context 'Among the most effective antagonistic strains, six isolates of Bacillus thuringiensis Berliner (Bacillales: Bacillaeae (after B. subtilis)), one isolate of B. mycoides Flugge, eight isolates of B. megaterium de Bary, five isolates of B.pumilus Meyer and Gottheil, one isolate of B. licheniformis (Weigmann) Chester, and four isolates of B. subtilis (Ehrenberg) Cohn were identified.
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [b.pumilus; b. licheniformis; b. subtilis]
<Options>: A: paracoccus lichenicola
B: tabanus pumilus
C: bomarea pumila
D: lichen globosus (aka sphaerophorus globosus)
E: bacillus longisporus ('bacillus longisporus') (aka bacillus longisporus)
F: conidiobolus lichenicola
G: bacillus mobilis
H: bacillus mesentericus (aka bacillus pumilus)
I: bacillus mesentericus (aka bacillus subtilis)
J: clostridium licheniforme (aka bacillus licheniformis)
K: bacillus pumilus (bacillus aminoglucosidicus) (aka bacillus pumilus)
L: vibrio subtilis (aka bacillus subtilis)
M: chionobas pumilus (aka paroeneis pumilus)
N: bacillus albus
O: bacillus pestis (aka yersinia pestis)
P: None of the above. | [K; J; I] |
<Instruct>: Given the context 'The organization of foraging in the fire ant, Solenopsis invicta.
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [solenopsis invicta]
<Options>: A: solenopsis indagatrix
B: red imported fire ant (aka solenopsis invicta)
C: solenopsis tonsa
D: crataegus invicta
E: solenopsis loretana
F: None of the above. | [B] |
<Instruct>: Given the context 'The experiments and observations in this paper reveal in broad strokes how colonies of the fire ant, Solenopsis invicta Buren (Hymenoptera: Formicidae), allocate their available labor to foraging, how they disperse that force within their territory, and how this force changes with colony size, season and worker age.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [solenopsis invicta; hymenoptera]
<Options>: A: solenopsis tonsa
B: solenopsis electra
C: imported red fire ant (aka solenopsis invicta)
D: heteroptera (true bugs) (aka heteroptera)
E: hymenochaete
F: sphenoptera
G: moths (aka lepidoptera)
H: solenopsis geminata (tropical fire ant) (aka solenopsis geminata)
I: philenoptera
J: solenopsis papuana
K: None of the above. | [C; K] |
<Instruct>: Given the context 'The experiments and observations in this paper reveal in broad strokes how colonies of the fire ant, Solenopsis invicta Buren (Hymenoptera: Formicidae), allocate their available labor to foraging, how they disperse that force within their territory, and how this force changes with colony size, season and worker age.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [solenopsis invicta; hymenoptera]
<Options>: A: solenopsis tonsa
B: hymenochaete
C: solenopsis geminata (tropical fire ant) (aka solenopsis geminata)
D: moths (aka lepidoptera)
E: sphenoptera
F: solenopsis papuana
G: philenoptera
H: heteroptera (true bugs) (aka heteroptera)
I: solenopsis electra
J: None of the above. | [J; J] |
<Instruct>: Given the context 'The experiments and observations in this paper reveal in broad strokes how colonies of the fire ant, Solenopsis invicta Buren (Hymenoptera: Formicidae), allocate their available labor to foraging, how they disperse that force within their territory, and how this force changes with colony size, season and worker age.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [solenopsis invicta; hymenoptera]
<Options>: A: hymenopterans (aka hymenoptera)
B: solenopsis tonsa
C: solenopsora elixiana
D: red fire ant (aka solenopsis invicta)
E: bugs (aka hemiptera) (aka hemiptera)
F: solenopsis electra
G: solenopsis molesta
H: hymenochaete
I: philenoptera
J: neoptera
K: None of the above. | [D; K] |
<Instruct>: Given the context 'Pollen preference for Psychotria sp. is not learned in the passion flower butterfly, Heliconius erato.
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [heliconius erato]
<Options>: A: heliconius erato emma
B: heliconius erato venus
C: heliconius erato petiverana (heliconius petiverana) (aka heliconius erato petiverana)
D: heliconius erato hydara
E: papilio erato (aka heliconius erato)
F: None of the above. | [E] |
<Instruct>: Given the context 'Behavioral experiments using plants preferred by Heliconius erato suggest that pollen preference in H. erato is an innate trait and consequently learning of chemical cues at roosting aggregations is unlikely.
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [heliconius erato; h. erato]
<Options>: A: crimson-patched longwing (aka heliconius erato)
B: heliconius erato venus
C: heliconius erato petiverana (heliconius petiverana) (aka heliconius erato petiverana)
D: heliconius erato favorinus
E: heliconius erato amazona
F: heliconius erato x heliconius himera
G: erato (aka erato <gastropods>)
H: heliconius erato etylus
I: None of the above. | [A; A] |
<Instruct>: Given the context 'Behavioral experiments using plants preferred by Heliconius erato suggest that pollen preference in H. erato is an innate trait and consequently learning of chemical cues at roosting aggregations is unlikely.
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [heliconius erato; h. erato]
<Options>: A: heliconius erato etylus
B: heliconius hortense
C: eratoena
D: papilio erato (aka heliconius erato)
E: heliconius erato emma
F: heliconius erato dignus
G: heliconius erato demophoon
H: heliconius erato favorinus
I: heliconius erato lativitta
J: None of the above. | [D; D] |
<Instruct>: Given the context 'Physiological and molecular evidence that environmental changes elicit morphological interconversion in the model diatom Phaeodactylum tricornutum.
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [phaeodactylum tricornutum]
<Options>: A: polytrichum convolutum (aka pogonatum convolutum)
B: phaedon brassicae (daikon leaf beetle) (aka phaedon brassicae)
C: pharyngora orientalis (aka prodistomum orientale)
D: phaeodactylum tricornutum (nitzschia closterium f. minutissima) (aka phaeodactylum tricornutum)
E: delphinium bicornutum
F: None of the above. | [D] |
<Instruct>: Given the context 'Over the last decades Phaeodactylum tricornutum has become a model to study diatom biology at the molecular level.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [phaeodactylum tricornutum]
<Options>: A: pharyngora orientalis (aka prodistomum orientale)
B: sinopotamon acutum (aka longpotamon acutum)
C: phaeodactylum tricornutum (nitzschia closterium f. minutissima) (aka phaeodactylum tricornutum)
D: delphinium tricorne
E: phaeoseptum thailandicum
F: None of the above. | [C] |
<Instruct>: Given the context 'Our aim was to quantify the effect of growth conditions on cell morphology of different P. tricornutum strains by quantitative microscopy, cellular imaging, and non-targeted transcriptomics.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [p. tricornutum]
<Options>: A: phaeodactylum tricornutum (nitzschia closterium f. minutissima) (aka phaeodactylum tricornutum)
B: penicillium tricolor
C: pero tricaria
D: phaseolus macrolepis
E: delphinium tricorne
F: None of the above. | [A] |
<Instruct>: Given the context 'Our aim was to quantify the effect of growth conditions on cell morphology of different P. tricornutum strains by quantitative microscopy, cellular imaging, and non-targeted transcriptomics.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [p. tricornutum]
<Options>: A: pero tricaria
B: delphinium tricorne
C: penicillium tricolor
D: phaseolus macrolepis
E: None of the above. | [E] |
<Instruct>: Given the context 'This work contributes to better understand the importance of the unique capability of morphotype conversion in P. tricornutum and its relevance in acclimation to changing environmental conditions.
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [p. tricornutum]
<Options>: A: lacinipolia tricornuta
B: polypedilum acutum
C: phaseolus gladiolatus
D: phaeodactylum tricornutum (nitzschia closterium f. minutissima) (aka phaeodactylum tricornutum)
E: phanerochaete pruinosa
F: None of the above. | [D] |
<Instruct>: Given the context 'To more confidently assess phylogenetic relationships among astome ciliates, we obtained small subunit (SSU) rRNA sequences from nine species distributed in six genera and three families: Almophrya bivacuolata, Eudrilophrya complanata, Metaracoelophrya sp. 1, Metaracoelophrya sp. 2, Metaracoelophrya intermedia, Metaradiophrya sp., Njinella prolifera, Paraclausilocola constricta n. gen., n. sp., and Paraclausilocola elongata n. sp. The two new species in the proposed new clausilocolid genus Paraclausilocola n. gen. are astomes with no attachment apparatus, two files of contractile vacuoles, and an arc-like anterior suture that has differentiations of thigmotactic ciliature on the anterior ends of the left kineties of the upper surface.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [almophrya bivacuolata; eudrilophrya complanata; metaracoelophrya intermedia; njinella prolifera]
<Options>: A: arganthomyza bivittata
B: metaracoelophrya intermedia
C: nassa complanata (aka phrontis complanata)
D: bivibranchia bimaculata
E: atya intermedia
F: woodwardia prolifera
G: leptophlebia intermedia
H: physostegia intermedia
I: xyris complanata
J: trentepohlia prolifera
K: thordisa bimaculata
L: anthophora bimaculata
M: eudrilophrya complanata
N: eurychorda complanata
O: acropora intermedia (madrepora intermedia) (aka acropora intermedia)
P: dendya prolifera (aka levinella prolifera)
Q: njinella prolifera
R: nymphaea prolifera
S: eremophila complanata
T: almophrya bivacuolata
U: None of the above. | [T; M; B; Q] |
<Instruct>: Given the context 'To more confidently assess phylogenetic relationships among astome ciliates, we obtained small subunit (SSU) rRNA sequences from nine species distributed in six genera and three families: Almophrya bivacuolata, Eudrilophrya complanata, Metaracoelophrya sp. 1, Metaracoelophrya sp. 2, Metaracoelophrya intermedia, Metaradiophrya sp., Njinella prolifera, Paraclausilocola constricta n. gen., n. sp., and Paraclausilocola elongata n. sp. The two new species in the proposed new clausilocolid genus Paraclausilocola n. gen. are astomes with no attachment apparatus, two files of contractile vacuoles, and an arc-like anterior suture that has differentiations of thigmotactic ciliature on the anterior ends of the left kineties of the upper surface.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [almophrya bivacuolata; eudrilophrya complanata; metaracoelophrya intermedia; njinella prolifera]
<Options>: A: spatalla prolifera
B: melliniella micrantha
C: megalophrys intermedius (aka megophrys intermedia)
D: bolitophila bimaculata
E: almophrya bivacuolata
F: yushania complanata
G: jania prolifera (aka cheilosporum proliferum)
H: eudrilophrya complanata
I: ennealophus euryandrus (herbertia euryandra) (aka ennealophus euryandrus)
J: endocladia complanata (aka gloiopeltis complanata)
K: aquimarina intermedia
L: entomobrya intermedia
M: eriope complicata
N: metaracoelophrya intermedia
O: araucaria biramulata
P: leiothrix prolifera (eriocaulon proliferum) (aka leiothrix prolifera)
Q: phrynovelia bimaculata
R: minuartia intermedia
S: njinella prolifera
T: nymphaea prolifera
U: None of the above. | [E; H; N; S] |
<Instruct>: Given the context 'To more confidently assess phylogenetic relationships among astome ciliates, we obtained small subunit (SSU) rRNA sequences from nine species distributed in six genera and three families: Almophrya bivacuolata, Eudrilophrya complanata, Metaracoelophrya sp. 1, Metaracoelophrya sp. 2, Metaracoelophrya intermedia, Metaradiophrya sp., Njinella prolifera, Paraclausilocola constricta n. gen., n. sp., and Paraclausilocola elongata n. sp. The two new species in the proposed new clausilocolid genus Paraclausilocola n. gen. are astomes with no attachment apparatus, two files of contractile vacuoles, and an arc-like anterior suture that has differentiations of thigmotactic ciliature on the anterior ends of the left kineties of the upper surface.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [almophrya bivacuolata; eudrilophrya complanata; metaracoelophrya intermedia; njinella prolifera]
<Options>: A: dendya prolifera (aka levinella prolifera)
B: terminalia complanata
C: amemboa intermedia
D: almophrya bivacuolata
E: phalaena complana (aka eilema complana)
F: moraea intermedia
G: phaenocoma prolifera
H: njinella prolifera
I: agroiconota bivittata
J: eudrilophrya complanata
K: atya intermedia
L: actinobolina bivacuolata
M: gleiopeltis complanata (aka gloiopeltis complanata)
N: bivibranchia bimaculata
O: bolitophila bimaculata
P: eurycope complanata
Q: callicarpa prolifera
R: lepidodermella intermedia
S: metaracoelophrya intermedia
T: woodwardia prolifera
U: None of the above. | [D; J; S; H] |
<Instruct>: Given the context 'To more confidently assess phylogenetic relationships among astome ciliates, we obtained small subunit (SSU) rRNA sequences from nine species distributed in six genera and three families: Almophrya bivacuolata, Eudrilophrya complanata, Metaracoelophrya sp. 1, Metaracoelophrya sp. 2, Metaracoelophrya intermedia, Metaradiophrya sp., Njinella prolifera, Paraclausilocola constricta n. gen., n. sp., and Paraclausilocola elongata n. sp. The two new species in the proposed new clausilocolid genus Paraclausilocola n. gen. are astomes with no attachment apparatus, two files of contractile vacuoles, and an arc-like anterior suture that has differentiations of thigmotactic ciliature on the anterior ends of the left kineties of the upper surface.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [almophrya bivacuolata; eudrilophrya complanata; metaracoelophrya intermedia; njinella prolifera]
<Options>: A: atya intermedia
B: phlegmariurus proliferus (huperzia prolifera) (aka phlegmariurus proliferus)
C: bivibranchia bimaculata
D: woodwardia prolifera
E: metaracoelophrya intermedia
F: anaxarcha intermedia
G: parabotia bimaculata
H: spatalla prolifera
I: eudrilophrya complanata
J: bolitophila bimaculata
K: almophrya bivacuolata
L: eurychorda complanata
M: jania prolifera (aka cheilosporum proliferum)
N: macrophya intermedia
O: eriope complicata
P: xyris complanata
Q: njinella prolifera
R: hybomitra bimaculata
S: nassa complanata (aka phrontis complanata)
T: brachytarsophrys intermedia (aka megophrys intermedia)
U: None of the above. | [K; I; E; Q] |
<Instruct>: Given the context 'To more confidently assess phylogenetic relationships among astome ciliates, we obtained small subunit (SSU) rRNA sequences from nine species distributed in six genera and three families: Almophrya bivacuolata, Eudrilophrya complanata, Metaracoelophrya sp. 1, Metaracoelophrya sp. 2, Metaracoelophrya intermedia, Metaradiophrya sp., Njinella prolifera, Paraclausilocola constricta n. gen., n. sp., and Paraclausilocola elongata n. sp. The two new species in the proposed new clausilocolid genus Paraclausilocola n. gen. are astomes with no attachment apparatus, two files of contractile vacuoles, and an arc-like anterior suture that has differentiations of thigmotactic ciliature on the anterior ends of the left kineties of the upper surface.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [paraclausilocola constricta n. gen., n. sp.; paraclausilocola elongata n. sp.]
<Options>: A: pelecopsis elongata
B: neophaeomoniella constricta
C: phyllostoma elongatum (aka phyllostomus elongatus)
D: paraclausilocola elongata
E: paraclausilocola constricta
F: phalangispora constricta
G: portulaca constricta
H: protolophozia elongata (lophozia elongata) (aka protolophozia elongata)
I: constrictochalara constricta
J: colispora elongata
K: None of the above. | [E; D] |
<Instruct>: Given the context 'To more confidently assess phylogenetic relationships among astome ciliates, we obtained small subunit (SSU) rRNA sequences from nine species distributed in six genera and three families: Almophrya bivacuolata, Eudrilophrya complanata, Metaracoelophrya sp. 1, Metaracoelophrya sp. 2, Metaracoelophrya intermedia, Metaradiophrya sp., Njinella prolifera, Paraclausilocola constricta n. gen., n. sp., and Paraclausilocola elongata n. sp. The two new species in the proposed new clausilocolid genus Paraclausilocola n. gen. are astomes with no attachment apparatus, two files of contractile vacuoles, and an arc-like anterior suture that has differentiations of thigmotactic ciliature on the anterior ends of the left kineties of the upper surface.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [paraclausilocola constricta n. gen., n. sp.; paraclausilocola elongata n. sp.]
<Options>: A: paraclausilocola constricta
B: pertusaria constricta
C: colispora elongata
D: lebouria elongata (aka neoplagioporus elongatus)
E: pohlia elongata
F: ranilia constricta (raninops constrictus) (aka ranilia constricta)
G: ciliopharyngiella constricta
H: chloridium constrictospora (aka chloridiopsis constrictospora)
I: paraclausilocola elongata
J: cryptoprymna elongata
K: None of the above. | [A; I] |
<Instruct>: Given the context 'Non-structural protein 1 (NS1) antibody-based assays to differentiate West Nile (WN) virus from Japanese encephalitis virus infections in horses: effects of WN virus NS1 antibodies induced by inactivated WN vaccine.
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [west nile; wn virus]
<Options>: A: noveria virus
B: weldona virus
C: kunjin virus (west nile virus - kunjin) (aka kunjin virus)
D: west nile virus strain pt6.16
E: avian nephritis virus
F: duck influenza virus
G: swinepox virus
H: west nile virus 1 (west nile virus lineage 1) (aka west nile virus 1)
I: wnv (aka west nile virus) (aka west nile virus)
J: None of the above. | [I; I] |
<Instruct>: Given the context 'Non-structural protein 1 (NS1) antibody-based assays to differentiate West Nile (WN) virus from Japanese encephalitis virus infections in horses: effects of WN virus NS1 antibodies induced by inactivated WN vaccine.
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [west nile; wn virus]
<Options>: A: kunjin virus (west nile virus - kunjin) (aka kunjin virus)
B: west nile virus strain pt6.39
C: west accra virus
D: west nile virus strain pt6.5
E: ntwetwe virus
F: wetland virus
G: equine influenza virus
H: weldona virus
I: west nile virus (wnv (aka west nile virus))
J: None of the above. | [I; I] |
<Instruct>: Given the context 'Antibodies to non-structural protein 1 (NS1) of West Nile virus (WNV) have been used to differentiate WNV infection from infection by serologically cross-reactive flaviviruses, including Japanese encephalitis virus (JEV), in horses.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [japanese encephalitis virus]
<Options>: A: jeju virus
B: japanese encephalitis virus je (aka japanese encephalitis virus)
C: jos virus
D: japanese encephalitis virus (strain sa(v)) (aka japanese encephalitis virus strain sa(v))
E: japanese encephalitis virus strain jaoars982 (japanese encephalitis virus (strain jaoars982)) (aka japanese encephalitis virus strain jaoars982)
F: None of the above. | [B] |
<Instruct>: Given the context 'However, since the inactivated West Nile (WN) vaccine has been reported to induce NS1 antibodies, there is concern about the reliability of using NS1-based assays for testing vaccinated horses.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [wn]
<Options>: A: wnv (aka west nile virus) (aka west nile virus)
B: west nile virus 1 (west nile virus lineage 1) (aka west nile virus 1)
C: niwlog virus
D: wahnesia
E: wenzelia
F: None of the above. | [A] |
<Instruct>: Given the context 'Therefore, the effect of inactivated WN vaccine-induced antibodies on an epitope-blocking ELISA and complement-dependent cytotoxicity (CDC) assay were investigated.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [wn]
<Options>: A: wilmottia koreana
B: aedes w-albus (stegomyia w-alba) (aka aedes w-albus)
C: wahnesia
D: wnv (aka west nile virus) (aka west nile virus)
E: witsand virus
F: None of the above. | [D] |
<Instruct>: Given the context 'Both assays are based on NS1 antibodies and were established previously to differentiate WNV from JEV infections in horses.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [wnv]
<Options>: A: nordland virus
B: noveria virus
C: flavivirus langat (aka langat virus)
D: denwin virus
E: wnv (aka west nile virus) (aka west nile virus)
F: None of the above. | [E] |
<Instruct>: Given the context 'Vaccine-induced NS1 antibodies were also detected by blocking ELISA and a CDC assay and affected the ability of these assays to differentiate WNV from JEV infections.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [wnv; jev]
<Options>: A: jeonjuvirus
B: kupe virus
C: jiangan virus
D: wnv (aka west nile virus) (aka west nile virus)
E: japanese encephalitis virus jev (aka japanese encephalitis virus)
F: jeju virus
G: nova hantavirus (aka nova virus)
H: flavivirus langat (aka langat virus)
I: nordland virus
J: trinbago virus
K: None of the above. | [D; E] |
<Instruct>: Given the context 'Vaccine-induced NS1 antibodies were also detected by blocking ELISA and a CDC assay and affected the ability of these assays to differentiate WNV from JEV infections.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [wnv; jev]
<Options>: A: west nile virus (wnv (aka west nile virus))
B: japanese encephalitis virus je (aka japanese encephalitis virus)
C: japanaut virus
D: vixey virus
E: dengue virus
F: flavivirus langat (aka langat virus)
G: tick-borne flavivirus
H: kenkeme virus
I: jiangan virus
J: jembrana disease virus
K: None of the above. | [A; B] |
<Instruct>: Given the context 'An Antarctic hypotrichous ciliate, Parasterkiella thompsoni (Foissner) nov. gen., nov. comb., recorded in Argentinean peat-bogs: morphology, morphogenesis, and molecular phylogeny.
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [parasterkiella thompsoni]
<Options>: A: rhopalopselion thompsoni
B: parosela thompsoniae (aka psorothamnus thompsoniae)
C: sterkiella thompsoni (aka parasterkiella thompsoni)
D: peristedion thompsoni
E: streptocarpus thompsonii
F: None of the above. | [C] |
<Instruct>: Given the context 'The ciliate Parasterkiella thompsoni (Foissner, 1996)', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [parasterkiella thompsoni]
<Options>: A: perkinsiella thompsoni
B: parasterkiella thompsoni (sterkiella thompsoni) (aka parasterkiella thompsoni)
C: aliatypus thompsoni
D: tenthredo thompsoni
E: lydella thompsoni
F: None of the above. | [B] |
<Instruct>: Given the context 'Phylogenetic analyses consistently placed P. thompsoni within the stylonychines.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [p. thompsoni]
<Options>: A: pyrgulopsis thompsoni
B: sterkiella thompsoni (aka parasterkiella thompsoni)
C: polyrhachis thompsoni
D: colpodaspis thompsoni
E: plasmopara sii
F: None of the above. | [B] |
<Instruct>: Given the context 'New data on the morphogenesis of the dorsal ciliature justifies the transference of Sterkiella thompsoni to a new genus Parasterkiella.
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [sterkiella thompsoni]
<Options>: A: parasterkiella thompsoni (sterkiella thompsoni) (aka parasterkiella thompsoni)
B: miltogramma thompsoni
C: salpa thompsoni
D: kallymenia thompsonii
E: streptocarpus thompsonii
F: None of the above. | [A] |
<Instruct>: Given the context 'Here, the novel orf virus (ORFV)-encoded protein ORFV002 was shown to inhibit nuclear events regulating NF-kappaB transcriptional activity.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [orf virus; orfv]
<Options>: A: ripawok virus
B: ripawon virus
C: orf virus ov/torino
D: orf virus nz7 (orf virus (strain nz7)?) (aka orf virus nz7)
E: elephantpox virus
F: orf virus (contagious pustular dermatitis virus) (aka orf virus)
G: mouyassue virus
H: human orf virus
I: orf virus (strain nz2)
J: None of the above. | [F; F] |
<Instruct>: Given the context 'Here, the novel orf virus (ORFV)-encoded protein ORFV002 was shown to inhibit nuclear events regulating NF-kappaB transcriptional activity.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [orf virus; orfv]
<Options>: A: maypo virus
B: orf virus ov/7
C: orf virus (contagious pustular dermatitis virus) (aka orf virus)
D: condorpox virus
E: ripawon virus
F: ripawok virus
G: orf virus ov/c2
H: omono river virus
I: rabbitpox virus
J: None of the above. | [C; C] |
<Instruct>: Given the context 'The roles played by Aspergillus nidulans apoptosis-inducing factor (AIF)-like mitochondrial oxidoreductase (AifA) and NADH-ubiquinone oxidoreductases (NdeA-B and NdiA) in farnesol resistance.
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [aspergillus nidulans]
<Options>: A: aspergillus cerealis
B: aspergillus nidulans (aspergillus nidulans (eidam) g. winter, 1884) (aka aspergillus nidulans)
C: aspergillus domesticus
D: aspergillus tritici (aka aspergillus neotritici)
E: aspergillus lanosus
F: None of the above. | [B] |
<Instruct>: Given the context 'Here, we show that Aspergillus nidulans AifA encoding the apoptosis-inducing factor (AIF)-like mitochondrial oxidoreductase plays a role in the function of the mitochondrial Complex I. Additionally, we demonstrated that ndeA-B and ndiA encode external and internal alternative NADH dehydrogenases, respectively, that have a function in FOH resistance.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [aspergillus nidulans]
<Options>: A: nassella nidulans
B: aspergillus nidulans (aspergillus nidulans (eidam) g. winter, 1884) (aka aspergillus nidulans)
C: aspergillus fumigatus fresen., 1863 (aka aspergillus fumigatus)
D: aspergillus aureolus (neosartorya aureola) (aka aspergillus aureolus)
E: aspergillus lanosus
F: None of the above. | [B] |
<Instruct>: Given the context 'From a number of different Aspergillus terreus controlled batch fermentations, those cultures with the largest difference in itaconic acid titer and productivity were selected for mRNA isolation.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [aspergillus terreus]
<Options>: A: aspergillus nidulans (aspergillus nidulans (eidam) g. winter, 1884) (aka aspergillus nidulans)
B: aspergillus neoellipticus (aka aspergillus fumigatus)
C: aspergillus melleus
D: aspergillus europaeus
E: aspergillus terrestris (aka aspergillus terreus)
F: None of the above. | [E] |
<Instruct>: Given the context 'Expression of this gene in Aspergillus niger, which is a natural citric acid producer, resulted in itaconate production.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [aspergillus niger]
<Options>: A: aspergillus lanuginosus
B: aspergillus neoellipticus (aka aspergillus fumigatus)
C: botrylloides niger
D: aspergillus lacticoffeatus (aka aspergillus niger)
E: aspergillus asperus (aka aspergillus asper)
F: None of the above. | [D] |
<Instruct>: Given the context 'Genome analysis suggests that in A. terreus the cis-aconitate decarboxylase gene is part of an itaconate acid related gene cluster including genes encoding two pathway specific transporters and a Zinc finger protein.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [a. terreus]
<Options>: A: aspergillus aureus
B: aspergillus avenaceus
C: aetomylaeus
D: aminipila terrae
E: aspergillus terrestris (aka aspergillus terreus)
F: None of the above. | [E] |
<Instruct>: Given the context 'Brief exposures of human body lice to sublethal amounts of ivermectin over-transcribes detoxification genes involved in tolerance.
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [human body lice]
<Options>: A: human louse (aka pediculus humanus)
B: guinea pig lice (aka gyropidae)
C: pediculus
D: human body lice (aka pediculus humanus corporis)
E: ungulate lice (aka haematopinidae)
F: None of the above. | [A] |
<Instruct>: Given the context '[~lethal concentration 90% (LC(90)) in 2-4 h]}, showed that ivermectin-induced detoxification genes from body lice are identified by quantitative real-time PCR analyses.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [body lice]
<Options>: A: human head louse (aka pediculus humanus capitis)
B: pediculus ovis (aka bovicola ovis)
C: pediculus
D: human lice (aka pediculus humanus)
E: sucking lice (aka anoplura)
F: None of the above. | [D] |
<Instruct>: Given the context 'B cells are one of the targets of Friend virus (FV) infection, a well-established mouse model often used to study retroviral infections in vivo.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [retroviral]
<Options>: A: human betaretrovirus
B: human endogenous retroviruses
C: vir
D: unidentified retrovirus (retrovirus) (aka unidentified retrovirus)
E: smrv (aka squirrel monkey retrovirus) (aka squirrel monkey retrovirus)
F: None of the above. | [D] |
<Instruct>: Given the context 'Furthermore, we demonstrate that complement opsonization of Friend murine leukemia virus (F-MuLV) enhances infection of B cells, which correlates with increased potency of B cells to activate FV-specific CD8(+) T cells.
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [murine leukemia virus (f-mulv)]
<Options>: A: murine leukemia-related retroviruses
B: xenotropic murine leukemia virus
C: ecotropic murine leukemia virus
D: xenotropic murine leukemia virus-related virus (aka xenotropic mulv-related virus)
E: murine leukemia virus (mlv (aka murine leukemia virus))
F: None of the above. | [E] |
<Instruct>: Given the context 'Furthermore, we demonstrate that complement opsonization of Friend murine leukemia virus (F-MuLV) enhances infection of B cells, which correlates with increased potency of B cells to activate FV-specific CD8(+) T cells.
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [murine leukemia virus (f-mulv)]
<Options>: A: xenotropic murine leukemia virus
B: murine leukemia-related retroviruses
C: ecotropic murine leukemia virus
D: xenotropic murine leukemia virus-related virus (aka xenotropic mulv-related virus)
E: None of the above. | [E] |
<Instruct>: Given the context 'Alphacoronavirus transmissible gastroenteritis virus nsp1 protein suppresses protein translation in mammalian cells and in cell-free HeLa cell extracts but not in rabbit reticulocyte lysate.
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [transmissible gastroenteritis virus; rabbit]
<Options>: A: domestic rabbit (aka oryctolagus cuniculus)
B: turkey rhinotracheitis virus trtv (aka turkey rhinotracheitis virus)
C: lepus palustris (aka sylvilagus palustris)
D: greater red rock rabbit (aka pronolagus crassicaudatus)
E: thv (aka turkey hepatitis virus) (aka turkey hepatitis virus)
F: riverine rabbit (aka bunolagus monticularis)
G: desert hare (aka lepus tibetanus)
H: turkey enteric coronavirus (aka turkey coronavirus)
I: turkey picornavirus
J: veev (aka venezuelan equine encephalitis virus) (aka venezuelan equine encephalitis virus)
K: None of the above. | [K; A] |
<Instruct>: Given the context 'Alphacoronavirus transmissible gastroenteritis virus nsp1 protein suppresses protein translation in mammalian cells and in cell-free HeLa cell extracts but not in rabbit reticulocyte lysate.
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [transmissible gastroenteritis virus; rabbit]
<Options>: A: turkey picornavirus
B: desert hare (aka lepus tibetanus)
C: greater red rock rabbit (aka pronolagus crassicaudatus)
D: pedv (aka porcine epidemic diarrhea virus) (aka porcine epidemic diarrhea virus)
E: turkey meningoencephalitis virus
F: oryctolagus cuniculus (japanese white rabbit) (aka oryctolagus cuniculus)
G: pygmy rabbit (aka brachylagus idahoensis)
H: thv (aka turkey hepatitis virus) (aka turkey hepatitis virus)
I: trtv (aka turkey rhinotracheitis virus) (aka turkey rhinotracheitis virus)
J: scrub hare (aka lepus saxatilis)
K: None of the above. | [K; F] |
<Instruct>: Given the context 'The nsp1 protein of transmissible gastroenteritis virus (TGEV), an alphacoronavirus, efficiently suppressed protein synthesis in mammalian cells.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [transmissible gastroenteritis virus; tgev]
<Options>: A: turkey gallivirus
B: tete virus (aka orthobunyavirus teteense)
C: turkey picornavirus
D: grange virus
E: taggert virus
F: turkey meningoencephalitis virus
G: venezuelan equine encephalomyelitis virus (aka venezuelan equine encephalitis virus)
H: trtv (aka turkey rhinotracheitis virus) (aka turkey rhinotracheitis virus)
I: veev (aka venezuelan equine encephalitis virus) (aka venezuelan equine encephalitis virus)
J: tgev virulent purdue
K: None of the above. | [K; K] |
<Instruct>: Given the context 'The nsp1 protein of transmissible gastroenteritis virus (TGEV), an alphacoronavirus, efficiently suppressed protein synthesis in mammalian cells.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [transmissible gastroenteritis virus; tgev]
<Options>: A: pedv (aka porcine epidemic diarrhea virus) (aka porcine epidemic diarrhea virus)
B: turkey picornavirus
C: taggert virus
D: turkey meningoencephalitis virus
E: tete virus (aka orthobunyavirus teteense)
F: turkey coronavirus (turkey enteric coronavirus) (aka turkey coronavirus)
G: tgev virulent purdue
H: porcine transmissable gastroenteritis coronavirus (aka transmissible gastroenteritis virus)
I: porcine transmissible gastroenteritis virus (aka transmissible gastroenteritis virus)
J: grange virus
K: None of the above. | [K; K] |
<Instruct>: Given the context 'Unlike the nsp1 protein of severe acute respiratory syndrome coronavirus, a betacoronavirus, the TGEV nsp1 protein was unable to bind 40S ribosomal subunits or promote host mRNA degradation.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [severe acute respiratory syndrome coronavirus; tgev]
<Options>: A: tsev (aka turkish sheep encephalitis virus) (aka turkish sheep encephalitis virus)
B: bat sars coronavirus (aka sars bat coronavirus)
C: severe acute respiratory syndrome-related coronavirus (sars (aka severe acute respiratory syndrome-related coronavirus))
D: tgev virulent purdue
E: sars2 (aka severe acute respiratory syndrome coronavirus 2)
F: tgev spike protein expression construct
G: transmissible gastroenteritis virus miller m60 (aka tgev miller m60)
H: severe acute respiratory syndrome coronavirus (sars coronavirus) (aka severe acute respiratory syndrome coronavirus)
I: tete virus (aka orthobunyavirus teteense)
J: sars coronavirus as
K: None of the above. | [C; K] |
<Instruct>: Given the context 'Unlike the nsp1 protein of severe acute respiratory syndrome coronavirus, a betacoronavirus, the TGEV nsp1 protein was unable to bind 40S ribosomal subunits or promote host mRNA degradation.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [severe acute respiratory syndrome coronavirus; tgev]
<Options>: A: sars2 (aka severe acute respiratory syndrome coronavirus 2)
B: tgev virulent purdue
C: transmissible gastroenteritis virus miller m60 (aka tgev miller m60)
D: bat sars coronavirus (aka sars bat coronavirus)
E: tsev (aka turkish sheep encephalitis virus) (aka turkish sheep encephalitis virus)
F: tgev spike protein expression construct
G: severe acute respiratory syndrome coronavirus (sars coronavirus) (aka severe acute respiratory syndrome coronavirus)
H: tete virus (aka orthobunyavirus teteense)
I: sars coronavirus as
J: None of the above. | [J; J] |
<Instruct>: Given the context 'Unlike the nsp1 protein of severe acute respiratory syndrome coronavirus, a betacoronavirus, the TGEV nsp1 protein was unable to bind 40S ribosomal subunits or promote host mRNA degradation.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [severe acute respiratory syndrome coronavirus; tgev]
<Options>: A: transmissible gastroenteritis virus (porcine transmissible gastroenteritis coronavirus) (aka transmissible gastroenteritis virus)
B: venezuelan equine encephalomyelitis virus (aka venezuelan equine encephalitis virus)
C: sars-related bat coronavirus (aka bat sars-like coronavirus)
D: tataguine virus
E: sars virus (aka severe acute respiratory syndrome coronavirus)
F: swine acute diarrhea syndrome related coronavirus
G: tgev spike protein expression construct
H: bat sars coronavirus (aka sars bat coronavirus)
I: hcov-sars (aka severe acute respiratory syndrome-related coronavirus)
J: tgev miller m6 (transmissible gastroenteritis virus miller m6) (aka tgev miller m6)
K: None of the above. | [I; K] |
<Instruct>: Given the context 'TGEV nsp1 also suppressed protein translation in cell-free HeLa cell extract; however, it did not affect translation in rabbit reticulocyte lysate (RRL).', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [tgev; rabbit]
<Options>: A: swamp rabbit (aka sylvilagus aquaticus)
B: tsev (aka turkish sheep encephalitis virus) (aka turkish sheep encephalitis virus)
C: taggert virus
D: venezuelan equine encephalomyelitis virus (aka venezuelan equine encephalitis virus)
E: japanese white rabbit (aka oryctolagus cuniculus)
F: transmissible gastroenteritis virus tgev (aka transmissible gastroenteritis virus)
G: lepus tibetanus (desert hare) (aka lepus tibetanus)
H: riverine rabbit (aka bunolagus monticularis)
I: lepus palustris (aka sylvilagus palustris)
J: tataguine virus
K: None of the above. | [K; E] |
<Instruct>: Given the context 'TGEV nsp1 also suppressed protein translation in cell-free HeLa cell extract; however, it did not affect translation in rabbit reticulocyte lysate (RRL).', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [tgev; rabbit]
<Options>: A: scrub hare (aka lepus saxatilis)
B: tgev miller m60 (transmissible gastroenteritis virus miller m60) (aka tgev miller m60)
C: oryctolagus cuniculus cuniculus (lepus cuniculus cuniculus) (aka oryctolagus cuniculus cuniculus)
D: venezuelan equine encephalomyelitis virus (aka venezuelan equine encephalitis virus)
E: tgev (aka transmissible gastroenteritis virus) (aka transmissible gastroenteritis virus)
F: greater red rock rabbit (aka pronolagus crassicaudatus)
G: swamp rabbit (aka sylvilagus aquaticus)
H: rabbits (aka oryctolagus cuniculus)
I: tgev miller m6 (transmissible gastroenteritis virus miller m6) (aka tgev miller m6)
J: taggert virus
K: None of the above. | [K; H] |
<Instruct>: Given the context 'Our data suggested that HeLa cell extracts and cultured host cells, but not RRL, contain a host factor(s) that is essential for TGEV nsp1-induced translational suppression.
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [tgev]
<Options>: A: tataguine virus
B: tgev spike protein expression construct
C: tgev virulent purdue
D: tete virus (aka orthobunyavirus teteense)
E: transmissible gastroenteritis virus miller m6 (aka tgev miller m6)
F: None of the above. | [F] |
<Instruct>: Given the context 'Climate effects on population fluctuations of the white-throated dipper Cinclus cinclus.
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [white-throated dipper; cinclus cinclus]
<Options>: A: chaetoceros cinctus
B: turdoides leucocephala
C: white-headed woodpecker (aka leuconotopicus albolarvatus)
D: cinclus
E: white-throated dipper (aka cinclus cinclus)
F: cinclosoma cinnamomeus (aka cinclosoma cinnamomeum)
G: white-capped dipper (aka cinclus leucocephalus)
H: cinclidotus danubicus
I: white-rumped seedeater (aka crithagra leucopygia)
J: None of the above. | [E; E] |
<Instruct>: Given the context 'Climate effects on population fluctuations of the white-throated dipper Cinclus cinclus.
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [white-throated dipper; cinclus cinclus]
<Options>: A: white-breasted thrasher (aka ramphocinclus brachyurus)
B: white-bellied duiker (aka cephalophorus leucogaster)
C: white-throated dipper (aka cinclus cinclus)
D: white-winged piprites (aka piprites chloris)
E: cinclus mexicanus
F: cinclus pallasi (aka cinclus pallasii)
G: cinclosoma cinnamomeus (aka cinclosoma cinnamomeum)
H: white-headed blind snake (aka indotyphlops albiceps)
I: cyrnus cintranus
J: None of the above. | [C; C] |
<Instruct>: Given the context 'We have studied fluctuations in a population of the white-throated dipper Cinclus cinclus during 31 years (1978-2008) in a river system in southern Norway in relation to both large-scale and local weather conditions occurring during the non-breeding season.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [white-throated dipper; cinclus cinclus]
<Options>: A: ptilopsis leucotis (northern white-faced owl) (aka ptilopsis leucotis)
B: white-throated dipper (aka cinclus cinclus)
C: cinclus pallasii (cinclus pallasi) (aka cinclus pallasii)
D: cinclidotus danubicus
E: white-eared brown-dove (aka phapitreron leucotis)
F: calathus cinctus
G: white-rumped sandpiper (aka calidris fuscicollis)
H: white-rumped seedeater (aka crithagra leucopygia)
I: cyrnus cintranus
J: None of the above. | [B; B] |
<Instruct>: Given the context 'We have studied fluctuations in a population of the white-throated dipper Cinclus cinclus during 31 years (1978-2008) in a river system in southern Norway in relation to both large-scale and local weather conditions occurring during the non-breeding season.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [white-throated dipper; cinclus cinclus]
<Options>: A: white-backed planthopper (aka sogatella furcifera)
B: trichorcus cinctus
C: cinclidotus danubicus
D: cinclus mexicanus
E: cinclus
F: white-throated robin (aka irania gutturalis)
G: white-winged piprites (aka piprites chloris)
H: indotyphlops albiceps (white-headed blind snake) (aka indotyphlops albiceps)
I: white-throated dipper (aka cinclus cinclus)
J: None of the above. | [I; I] |
<Instruct>: Given the context 'Modification of nonstructural protein 1 of influenza A virus by SUMO1.
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [influenza a virus]
<Options>: A: duck influenza virus
B: unidentified influenza virus (avian influenza virus) (aka unidentified influenza virus)
C: swine influenza virus
D: influenza a virus (human influenza a virus) (aka influenza a virus)
E: influenza a virus (a/china)
F: None of the above. | [D] |
<Instruct>: Given the context 'Nonstructural protein 1 (NS1) is one of the major factors resulting in the efficient infection rate and high level of virulence of influenza A virus.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [influenza a virus]
<Options>: A: flubv (aka influenza b virus)
B: swine influenza virus
C: equine influenza virus
D: influenza a virus (a/china)
E: influenza a virus (human influenza a virus) (aka influenza a virus)
F: None of the above. | [E] |
<Instruct>: Given the context 'In the present study, we demonstrate that NS1 of the highly pathogenic avian influenza A/Duck/Hubei/L-1/2004 (H5N1) virus interacts with human Ubc9, which is the E2 conjugating enzyme for sumoylation, and we show that SUMO1 is conjugated to H5N1 NS1 in both transfected and infected cells.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [influenza; a/duck/hubei/l-1/2004 (h5n1) virus; human; h5n1]
<Options>: A: influenza a virus (a/duck/hubei/r113/2013(h9))
B: unidentified influenza virus (avian influenza virus) (aka unidentified influenza virus)
C: influenza a virus (a/duck/hunan/1231/2006(h5n1))
D: homo (humans) (aka homo)
E: influenza b virus (influenza virus type b) (aka influenza b virus)
F: h1n1 swine influenza virus
G: newt influenza virus
H: swine influenza virus
I: influenza a virus (a/duck/hunan/1271/2006(h5n1))
J: alphainfluenzavirus (influenzavirus a) (aka alphainfluenzavirus)
K: human body louse (aka pediculus humanus corporis)
L: neandertal man (aka homo sapiens neanderthalensis)
M: influenza a virus (a/china)
N: duck influenza virus
O: homo sapiens (human) (aka homo sapiens)
P: influenza a virus (a/duck/hunan/1/2006(h9n2))
Q: cardium humanum (aka glossus humanus)
R: influenza a virus (a/duck/hunan/733/2004(h5n1))
S: influenza a virus (human influenza a virus) (aka influenza a virus)
T: None of the above. | [S; S; O; S] |
<Instruct>: Given the context 'In the present study, we demonstrate that NS1 of the highly pathogenic avian influenza A/Duck/Hubei/L-1/2004 (H5N1) virus interacts with human Ubc9, which is the E2 conjugating enzyme for sumoylation, and we show that SUMO1 is conjugated to H5N1 NS1 in both transfected and infected cells.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [influenza; a/duck/hubei/l-1/2004 (h5n1) virus; human; h5n1]
<Options>: A: influenza a virus (a/duck/hubei/3/2005(h5n1))
B: influenza a virus (a/duck/hunan/1271/2006(h5n1))
C: h1n1 swine influenza virus
D: sphaeria humana (aka sordaria humana)
E: alphainfluenzavirus (influenzavirus a) (aka alphainfluenzavirus)
F: human (aka homo sapiens)
G: gammainfluenzavirus influenzae
H: influenza a virus (a/duck/hubei/r113/2013(h9))
I: influenza a virus (a/duck/hunan/733/2004(h5n1))
J: cardium humanum (aka glossus humanus)
K: influenza a virus (a/duck/anhui/1/06(h5n1))
L: pediculus humanus (human louse) (aka pediculus humanus)
M: flubv (aka influenza b virus)
N: great apes (aka hominidae)
O: influenza b virus (influenza virus type b) (aka influenza b virus)
P: influenza a virus (human influenza a virus) (aka influenza a virus)
Q: equine influenza virus
R: None of the above. | [P; P; F; P] |
<Instruct>: Given the context 'In the present study, we demonstrate that NS1 of the highly pathogenic avian influenza A/Duck/Hubei/L-1/2004 (H5N1) virus interacts with human Ubc9, which is the E2 conjugating enzyme for sumoylation, and we show that SUMO1 is conjugated to H5N1 NS1 in both transfected and infected cells.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [influenza; a/duck/hubei/l-1/2004 (h5n1) virus; human; h5n1]
<Options>: A: newt influenza virus
B: swine influenza virus
C: sphaeria humana (aka sordaria humana)
D: alphainfluenzavirus influenzae
E: great apes (aka hominidae)
F: influenza a virus (a/duck/hunan/782/2003(h5n1))
G: equine influenza virus
H: influenza c viruses (aka influenza c virus)
I: duck influenza virus
J: influenza a virus (a/duck/hunan/1247/2006(h5n1))
K: influenza a virus (a/duck/anhui/1/06(h5n1))
L: influenza virus type a (aka influenza a virus)
M: cardium humanum (aka glossus humanus)
N: human (aka homo sapiens)
O: unidentified influenza virus (avian influenza virus) (aka unidentified influenza virus)
P: human body louse (aka pediculus humanus corporis)
Q: influenza a virus (a/duck/hunan/1152/2006(h5n1))
R: influenza a virus (a/duck/hubei/r113/2013(h9))
S: None of the above. | [L; L; N; L] |
<Instruct>: Given the context 'In the present study, we demonstrate that NS1 of the highly pathogenic avian influenza A/Duck/Hubei/L-1/2004 (H5N1) virus interacts with human Ubc9, which is the E2 conjugating enzyme for sumoylation, and we show that SUMO1 is conjugated to H5N1 NS1 in both transfected and infected cells.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [influenza; a/duck/hubei/l-1/2004 (h5n1) virus; human; h5n1]
<Options>: A: unidentified influenza virus (avian influenza virus) (aka unidentified influenza virus)
B: influenza b virus (influenza virus type b) (aka influenza b virus)
C: influenza a virus (a/duck/anhui/1/06(h5n1))
D: homo sapiens (human) (aka homo sapiens)
E: influenza a virus (a/duck/hunan/1247/2006(h5n1))
F: influenza a virus (a/duck/hunan/1172/2006(h5n1))
G: homo (humans) (aka homo)
H: swine influenza virus
I: influenzavirus a (aka alphainfluenzavirus)
J: pediculus humanus (human louse) (aka pediculus humanus)
K: carcharhinus humani
L: gammainfluenzavirus influenzae
M: influenza a virus (a/duck/hunan/1265/2005(h5n1))
N: macrobiotus sapiens
O: influenza c viruses (aka influenza c virus)
P: avian influenza virus h5n1 (aka h5n1 subtype)
Q: influenza a virus (a/china)
R: influenza a virus (human influenza a virus) (aka influenza a virus)
S: influenza a virus (a/duck/hubei/wp/2003(h5n1))
T: None of the above. | [R; R; D; R] |
<Instruct>: Given the context 'Studies of different influenza A virus strains of human and avian origin showed that the majority of viruses possess an NS1 protein that is modified by SUMO1, except for the recently emerged swine-origin influenza A virus (S-OIV) (H1N1).', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [influenza a virus; human; swine-origin influenza a virus (s-oiv) (h1n1)]
<Options>: A: homo sapiens (human) (aka homo sapiens)
B: human body louse (aka pediculus humanus corporis)
C: fluav (aka influenza a virus)
D: flubv (aka influenza b virus)
E: great apes (aka hominidae)
F: influenza a virus (a/swine/iowa/1945(h1n1))
G: influenza c virus (influenza virus type c) (aka influenza c virus)
H: influenza a virus (a/china)
I: influenzavirus a (aka alphainfluenzavirus)
J: influenza a virus (a/swine/iowa/2/1986(h1n1))
K: human louse (aka pediculus humanus)
L: influenza a virus (a/swine/northern ireland/1938(h1n1))
M: macrobiotus sapiens
N: None of the above. | [C; A; C] |
<Instruct>: Given the context 'Studies of different influenza A virus strains of human and avian origin showed that the majority of viruses possess an NS1 protein that is modified by SUMO1, except for the recently emerged swine-origin influenza A virus (S-OIV) (H1N1).', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [influenza a virus; human; swine-origin influenza a virus (s-oiv) (h1n1)]
<Options>: A: influenza a virus (a/swine/iowa/1945(h1n1))
B: sphaeria humana (aka sordaria humana)
C: influenza a virus (a/swine/iowa/1/1986(h1n1))
D: influenza a virus (a/china)
E: fluav (aka influenza a virus)
F: duck influenza virus
G: neanderthal man (aka homo sapiens neanderthalensis)
H: influenza virus type b (aka influenza b virus)
I: influenza virus type c (aka influenza c virus)
J: pediculus humanus (human louse) (aka pediculus humanus)
K: homo (humans) (aka homo)
L: human (aka homo sapiens)
M: h1n1 swine influenza virus
N: None of the above. | [E; L; E] |
<Instruct>: Given the context 'Studies of different influenza A virus strains of human and avian origin showed that the majority of viruses possess an NS1 protein that is modified by SUMO1, except for the recently emerged swine-origin influenza A virus (S-OIV) (H1N1).', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [influenza a virus; human; swine-origin influenza a virus (s-oiv) (h1n1)]
<Options>: A: human (aka homo sapiens)
B: sphaeria humana (aka sordaria humana)
C: influenzavirus a (aka alphainfluenzavirus)
D: neandertal man (aka homo sapiens neanderthalensis)
E: influenza a virus (a/china)
F: duck influenza virus
G: influenza virus type c (aka influenza c virus)
H: macrobiotus sapiens
I: swine influenza virus
J: fluav (aka influenza a virus)
K: influenza a virus (a/swine/iowa/1945(h1n1))
L: homo (humans) (aka homo)
M: None of the above. | [J; A; J] |
<Instruct>: Given the context 'Together, these results indicate that sumoylation enhances NS1 stability and thus promotes rapid growth of influenza A virus.
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [influenza a virus]
<Options>: A: swine influenza virus
B: influenza b virus (influenza virus type b) (aka influenza b virus)
C: influenza virus type a (aka influenza a virus)
D: influenza a virus (a/china)
E: alphainfluenzavirus (influenzavirus a) (aka alphainfluenzavirus)
F: None of the above. | [C] |
<Instruct>: Given the context 'Stepwise loss of fluorescent core protein V from human adenovirus during entry into cells.
Human adenoviruses (Ads) replicate and assemble particles in the nucleus.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [human adenovirus; human adenoviruses (ads)]
<Options>: A: rodent adenovirus
B: human adenovirus a (aka human mastadenovirus a)
C: human adenovirus type 1 (aka human adenovirus 1)
D: adenovirus type 7 (aka human adenovirus 7)
E: adenovirus (aka unidentified adenovirus)
F: adenovirus type 1 (aka human adenovirus 1)
G: unidentified human adenovirus
H: human adenovirus (aka human adenovirus sp.)
I: None of the above. | [E; E] |
<Instruct>: Given the context 'Stepwise loss of fluorescent core protein V from human adenovirus during entry into cells.
Human adenoviruses (Ads) replicate and assemble particles in the nucleus.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [human adenovirus; human adenoviruses (ads)]
<Options>: A: human adenovirus a (aka human mastadenovirus a)
B: human adenovirus 68 (human adenovirus type 68) (aka human adenovirus 68)
C: duck adenovirus
D: human adenovirus f (aka human mastadenovirus f)
E: adeno-associated virus
F: human adenovirus sp. (human adenovirus) (aka human adenovirus sp.)
G: rodent adenovirus
H: unidentified adenovirus (adenovirus) (aka unidentified adenovirus)
I: adenovirus 7 (aka human adenovirus 7)
J: None of the above. | [H; H] |
<Instruct>: Given the context 'Disassembled capsids, positive for the conformation-specific antihexon antibody R70, were devoid of GFP-pV. The loss of GFP-pV was reduced by the macrolide antibiotic leptomycin B (LMB), which blocks nuclear export and adenovirus attachment to the nuclear pore complex.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [adenovirus]
<Options>: A: adenovirus type 7 (aka human adenovirus 7)
B: adeno-associated virus
C: unidentified adenovirus (adenovirus) (aka unidentified adenovirus)
D: adenovirus 14 (aka human adenovirus 14)
E: human adenovirus type 1 (aka human adenovirus 1)
F: None of the above. | [C] |
<Instruct>: Given the context 'LMB inhibited the appearance of R70 epitopes on Ad2 and Ad2-GFP-pV, indicating that the loss of GFP-pV from Ad2-GFP-pV is an authentic step in the adenovirus uncoating program.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [adenovirus]
<Options>: A: duck adenovirus
B: adenovirus 14 (aka human adenovirus 14)
C: adenovirus (aka unidentified adenovirus)
D: adenovirus ad5 (aka human adenovirus 5)
E: avian adeno-associated virus
F: None of the above. | [C] |
<Instruct>: Given the context 'Ad2-GFP-pV is genetically complete and hence enables detailed analyses of infection and spreading dynamics in cells and model organisms or assessment of oncolytic adenoviral potential.
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [adenoviral]
<Options>: A: human adenovirus d8 (human adenovirus type 8) (aka human adenovirus d8)
B: duck adeno-associated virus
C: unidentified human adenovirus
D: adenovirus (aka unidentified adenovirus)
E: adenovirus ad5 (aka human adenovirus 5)
F: None of the above. | [D] |
<Instruct>: Given the context 'Ad2-GFP-pV is genetically complete and hence enables detailed analyses of infection and spreading dynamics in cells and model organisms or assessment of oncolytic adenoviral potential.
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [adenoviral]
<Options>: A: unidentified human adenovirus
B: human adenovirus d8 (human adenovirus type 8) (aka human adenovirus d8)
C: adenovirus ad5 (aka human adenovirus 5)
D: duck adeno-associated virus
E: None of the above. | [E] |
<Instruct>: Given the context 'Novel mutations reveal two important regions in Aspergillus nidulans transcriptional activator MetR.
Expression of the sulfur assimilation pathway in Aspergillus nidulans is under control of sulfur metabolite repression, which is composed of scon genes encoding subunits of ubiquitin ligase and the metR gene coding for a transcriptional activator.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [aspergillus nidulans]
<Options>: A: neosartorya fumigata (aka aspergillus fumigatus)
B: aspergillus avenaceus
C: aspergillus cerealis
D: aspergillus domesticus
E: aspergillus nidulellus (aka aspergillus nidulans)
F: None of the above. | [E] |
<Instruct>: Given the context 'Thus, metR18 and the three dominant suppressors represent new types of mutations affecting different parts of the A. nidulans MetR protein.
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [a. nidulans]
<Options>: A: aspergillus neotritici (aspergillus tritici) (aka aspergillus neotritici)
B: nassella nidulans
C: aphanothece nidulans
D: aspergillus nidulans (eidam) g. winter, 1884 (aka aspergillus nidulans)
E: aspergillus cerealis
F: None of the above. | [D] |
<Instruct>: Given the context 'Paralogous cyp51 genes in Fusarium graminearum mediate differential sensitivity to sterol demethylation inhibitors.
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [fusarium graminearum]
<Options>: A: fusarium heterosporum
B: fusarium nodosum
C: fusisporium cerealis (aka fusarium cerealis)
D: fusarium graminearum (gibberella zeae (schwein.) petch, 1936) (aka fusarium graminearum)
E: fusarium graminum
F: None of the above. | [D] |
<Instruct>: Given the context 'Analysis of the genome sequence of Fusarium graminearum revealed three paralogous cyp51 genes (designated cyp51A, -B, and -C) encoding 14-alpha demethylases in this fungus.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [fusarium graminearum]
<Options>: A: fusarium heterosporum
B: fusarium pseudograminearum
C: fusarium graminearum (gibberella zeae (schwein.) petch, 1936) (aka fusarium graminearum)
D: fusarium avenaceum (gibberella avenacea r.j. cook, 1967) (aka fusarium avenaceum)
E: fusarium nodosum
F: None of the above. | [C] |
<Instruct>: Given the context 'Targeted gene disruption showed that the cyp51A, -B or -C disruption mutants were morphologically indistinguishable from the parent isolate on potato dextrose agar medium, which indicates that none of these genes is essential for mycelial growth.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [potato]
<Options>: A: chilean potato-tree (aka solanum crispum)
B: chinese-potato (aka dioscorea polystachya)
C: solanum paludosum
D: solanum tuberosum (solanum aracc-papa) (aka solanum tuberosum)
E: potato-bean (aka pachyrhizus erosus)
F: None of the above. | [D] |
<Instruct>: Given the context 'The sensitivity of F. graminearum isolates increased significantly when subjected in vitro to a mixture of DMI fungicides triadimefon and tebuconazole as compared to the individual components.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [f. graminearum]
<Options>: A: sphaeria zeae (aka fusarium graminearum)
B: fusarium culmorum (fusisporium culmorum) (aka fusarium culmorum)
C: fusarium nodosum
D: fusarium thapsina (aka fusarium thapsinum)
E: gibberella avenacea (aka fusarium avenaceum)
F: None of the above. | [A] |
<Instruct>: Given the context 'These results indicate that different DMI fungicides target different CYP51 proteins in F. graminearum and that a mixture of DMI fungicides can result in synergistic effects.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [f. graminearum]
<Options>: A: fusisporium cerealis (aka fusarium cerealis)
B: fusarium thapsina (aka fusarium thapsinum)
C: gibberella zeae (aka fusarium graminearum)
D: fusarium culmorum (fusisporium culmorum) (aka fusarium culmorum)
E: fusarium toxicum
F: None of the above. | [C] |
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