instruction stringlengths 209 946 | input stringlengths 96 1.45k | response stringlengths 3 12 |
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<Instruct>: Given the context 'The two fungal pathogens Blumeria graminis f. sp. tritici (B.g. tritici) and hordei (B.g. hordei) cause powdery mildew specifically in wheat or barley.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [blumeria graminis f. sp. tritici; b.g. tritici; hordei; b.g. hordei]
<Options>: A: blumeria graminis f. sp. hordei (aka blumeria hordei)
B: blumeria graminis f. sp. triticale
C: aspergillus hordei
D: heliconius hortense
E: blumeria graminis f. sp. agropyri
F: blumeria graminicola (blumeria graminis f. sp. poae) (aka blumeria graminicola)
G: hordeum vulgare (barley) (aka hordeum vulgare)
H: hordeinae
I: blumeria hordei (erysiphe graminis (subsp. hordei)) (aka blumeria hordei)
J: bradyrhizobium glycinis
K: blumeria graminis f. sp. poae (aka blumeria graminicola)
L: bremia graminicola (aka graminivora graminicola)
M: grass mildew (aka blumeria graminis)
N: gibellia cerealis (aka gibellina cerealis)
O: grass mildew (aka blumeria hordei)
P: gyge branchialis
Q: wheat stem rust (aka puccinia graminis)
R: None of the above. | [M; M; M; M] |
<Instruct>: Given the context 'The two fungal pathogens Blumeria graminis f. sp. tritici (B.g. tritici) and hordei (B.g. hordei) cause powdery mildew specifically in wheat or barley.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [blumeria graminis f. sp. tritici; b.g. tritici; hordei; b.g. hordei]
<Options>: A: grass mildew (aka blumeria hordei)
B: grass mildew (aka blumeria graminis)
C: hordeinae
D: bradyrhizobium glycinis
E: puccinia graminis (wheat stem rust) (aka puccinia graminis)
F: bacillus graminis (aka lederbergia graminis)
G: fusarium brachygibbosum
H: blumeria graminis f. sp. triticale
I: gyge branchialis
J: blumeria graminicola (blumeria graminis f. sp. poae) (aka blumeria graminicola)
K: blumeria graminis f. sp. secalis
L: aphelinus hordei
M: hordeum procerum
N: blumeria graminis f. sp. agropyri
O: boarmia grisea (aka rikiosatoa grisea)
P: hordeum parodii
Q: horatia
R: None of the above. | [B; B; B; B] |
<Instruct>: Given the context 'The two fungal pathogens Blumeria graminis f. sp. tritici (B.g. tritici) and hordei (B.g. hordei) cause powdery mildew specifically in wheat or barley.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [blumeria graminis f. sp. tritici; b.g. tritici; hordei; b.g. hordei]
<Options>: A: heterodera hordecalis
B: blumeria graminis f. sp. agropyri
C: blumeria graminis f. sp. poae (aka blumeria graminicola)
D: blumeria graminis f. sp. bromi (aka blumeria bulbigera)
E: hordeinae
F: blumeria avenae (blumeria graminis f. sp. avenae) (aka blumeria avenae)
G: blumeria graminis f. sp. secalis
H: blumeria graminicola (blumeria graminis f. sp. poae) (aka blumeria graminicola)
I: fusarium graminearum (gibberella zeae (schwein.) petch, 1936) (aka fusarium graminearum)
J: horatia
K: bacillus graminis (aka lederbergia graminis)
L: blumeria graminis (erysiphe graminis) (aka blumeria graminis)
M: horia
N: lahoria hortensis (aka branchiodrilus hortensis)
O: blumeria graminis f. sp. hordei (aka blumeria hordei)
P: bremia graminicola (aka graminivora graminicola)
Q: gibbaeum hortenseae
R: grass mildew (aka blumeria hordei)
S: None of the above. | [L; L; L; L] |
<Instruct>: Given the context 'The two fungal pathogens Blumeria graminis f. sp. tritici (B.g. tritici) and hordei (B.g. hordei) cause powdery mildew specifically in wheat or barley.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [wheat; barley]
<Options>: A: common wheat (aka triticum aestivum)
B: hordeum (barleys) (aka hordeum)
C: rye (aka secale cereale) (aka secale cereale)
D: hordeum brachyantherum
E: triticum peregrinum (aka aegilops peregrina)
F: triticum vulgare (aka triticum aestivum)
G: barley (aka hordeum vulgare)
H: one-grained wheat (aka triticum monococcum)
I: wild emmer wheat (aka triticum dicoccoides)
J: triticum tauschii (aka aegilops tauschii)
K: None of the above. | [A; G] |
<Instruct>: Given the context 'The two fungal pathogens Blumeria graminis f. sp. tritici (B.g. tritici) and hordei (B.g. hordei) cause powdery mildew specifically in wheat or barley.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [wheat; barley]
<Options>: A: rye (aka secale cereale) (aka secale cereale)
B: barleys (aka hordeum)
C: hordeum brachyantherum
D: one-grained wheat (aka triticum monococcum)
E: triticum aegilops (aka aegilops tauschii)
F: barley (aka hordeum vulgare)
G: triticum sativum (aka triticum aestivum)
H: polish wheat (aka triticum polonicum)
I: triticum peregrinum (aka aegilops peregrina)
J: seaside barley (aka hordeum marinum)
K: None of the above. | [G; F] |
<Instruct>: Given the context 'We sequenced a total of 273.3kb derived from B.g. tritici BAC sequences and compared them with the orthologous regions in the B.g. hordei genome.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [b.g. tritici; b.g. hordei]
<Options>: A: gyge branchialis
B: gibbaeum hortenseae
C: bacillus horti
D: fusarium graminearum (gibberella zeae (schwein.) petch, 1936) (aka fusarium graminearum)
E: grass mildew (aka blumeria graminis)
F: bradyrhizobium glycinis
G: bremia graminicola (aka graminivora graminicola)
H: zymoseptoria tritici (mycosphaerella graminicola) (aka zymoseptoria tritici)
I: glycomyces tritici
J: None of the above. | [E; E] |
<Instruct>: Given the context 'We sequenced a total of 273.3kb derived from B.g. tritici BAC sequences and compared them with the orthologous regions in the B.g. hordei genome.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [b.g. tritici; b.g. hordei]
<Options>: A: brachybacterium horti
B: gibellia cerealis (aka gibellina cerealis)
C: blumeria graminicola (blumeria graminis f. sp. poae) (aka blumeria graminicola)
D: grass mildew (aka blumeria graminis)
E: bacillus horti
F: puccinia hordei
G: bremia graminicola (aka graminivora graminicola)
H: blumeria avenae (blumeria graminis f. sp. avenae) (aka blumeria avenae)
I: bacillus graminis (aka lederbergia graminis)
J: None of the above. | [D; D] |
<Instruct>: Given the context 'To estimate the divergence time of B.g. tritici and B.g. hordei, we used conserved intergenic sequences including orthologous transposable elements.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [b.g. tritici; b.g. hordei]
<Options>: A: grass mildew (aka blumeria hordei)
B: blumeria graminicola (blumeria graminis f. sp. poae) (aka blumeria graminicola)
C: puccinia graminis (wheat stem rust) (aka puccinia graminis)
D: glycomyces tritici
E: gibbaeum hortenseae
F: erysiphe graminis (aka blumeria graminis)
G: brachybacterium horti
H: zymoseptoria tritici (mycosphaerella graminicola) (aka zymoseptoria tritici)
I: None of the above. | [F; F] |
<Instruct>: Given the context 'To estimate the divergence time of B.g. tritici and B.g. hordei, we used conserved intergenic sequences including orthologous transposable elements.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [b.g. tritici; b.g. hordei]
<Options>: A: gyge branchialis
B: blumeria hordei (erysiphe graminis (subsp. hordei)) (aka blumeria hordei)
C: fusarium brachygibbosum
D: zymoseptoria tritici (mycosphaerella graminicola) (aka zymoseptoria tritici)
E: boarmia grisea (aka rikiosatoa grisea)
F: puccinia graminis (wheat stem rust) (aka puccinia graminis)
G: lederbergia graminis (bacillus graminis) (aka lederbergia graminis)
H: erysiphe graminis (aka blumeria graminis)
I: grass mildew (aka blumeria hordei)
J: None of the above. | [H; H] |
<Instruct>: Given the context 'This revealed that B.g. tritici and B.g. hordei have diverged about 10 million years ago (MYA), two million years after wheat and barley (12 MYA).', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [b.g. tritici; b.g. hordei; wheat; barley]
<Options>: A: canadian hard winter wheat (aka triticum aestivum)
B: polish wheat (aka triticum polonicum)
C: graminivora graminicola (bremia graminicola) (aka graminivora graminicola)
D: bipolaris triticicola
E: triticum triunciale (aka aegilops triuncialis)
F: two-rowed barley (aka hordeum vulgare subsp. vulgare)
G: blumeria graminis f. sp. triticale
H: bremia graminicola (aka graminivora graminicola)
I: grass mildew (aka blumeria graminis)
J: bradyrhizobium glycinis
K: wild barley (aka hordeum vulgare subsp. spontaneum)
L: triticum peregrinum (aka aegilops peregrina)
M: seaside barley (aka hordeum marinum)
N: blumeria graminis f. sp. bromi (aka blumeria bulbigera)
O: bacillus horti
P: triticum aethiopicum (aka triticum turgidum)
Q: brachygeophilus truncorum (aka geophilus truncorum)
R: hordeum brachyantherum
S: barley (aka hordeum vulgare)
T: None of the above. | [I; I; A; S] |
<Instruct>: Given the context 'This revealed that B.g. tritici and B.g. hordei have diverged about 10 million years ago (MYA), two million years after wheat and barley (12 MYA).', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [b.g. tritici; b.g. hordei; wheat; barley]
<Options>: A: bradyrhizobium glycinis
B: einkorn wheat (aka triticum monococcum)
C: bipolaris triticicola
D: triticum aegilops (aka aegilops tauschii)
E: brachybacterium horti
F: gibellia cerealis (aka gibellina cerealis)
G: blumeria graminis f. sp. triticale
H: bread wheat (aka triticum aestivum)
I: boarmia grisea (aka rikiosatoa grisea)
J: fusarium graminearum (gibberella zeae (schwein.) petch, 1936) (aka fusarium graminearum)
K: hordeum marinum (seaside barley) (aka hordeum marinum)
L: gibbaeum hortenseae
M: barley (aka hordeum vulgare)
N: grass mildew (aka blumeria graminis)
O: triticum
P: bacillus graminis (aka lederbergia graminis)
Q: triticum triunciale (aka aegilops triuncialis)
R: hordeum brachyantherum
S: None of the above. | [N; N; H; M] |
<Instruct>: Given the context 'This revealed that B.g. tritici and B.g. hordei have diverged about 10 million years ago (MYA), two million years after wheat and barley (12 MYA).', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [b.g. tritici; b.g. hordei; wheat; barley]
<Options>: A: gibbaeum hortenseae
B: gibberella zeae (aka fusarium graminearum)
C: boarmia grisea (aka rikiosatoa grisea)
D: hordeum (barleys) (aka hordeum)
E: triticum peregrinum (aka aegilops peregrina)
F: bradyrhizobium glycinis
G: bacillus horti
H: wheat (aka triticum aestivum)
I: rye (aka secale cereale) (aka secale cereale)
J: wild emmer wheat (aka triticum dicoccoides)
K: polish wheat (aka triticum polonicum)
L: wild barley (aka hordeum vulgare subsp. spontaneum)
M: grass mildew (aka blumeria graminis)
N: hordeum vulgare (barley) (aka hordeum vulgare)
O: grass mildew (aka blumeria hordei)
P: gibellia cerealis (aka gibellina cerealis)
Q: glycomyces tritici
R: lederbergia graminis (bacillus graminis) (aka lederbergia graminis)
S: triticum aegilops (aka aegilops tauschii)
T: None of the above. | [M; M; H; N] |
<Instruct>: Given the context 'This revealed that B.g. tritici and B.g. hordei have diverged about 10 million years ago (MYA), two million years after wheat and barley (12 MYA).', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [b.g. tritici; b.g. hordei; wheat; barley]
<Options>: A: wild barley (aka hordeum vulgare subsp. spontaneum)
B: blumeria graminis f. sp. triticale
C: puccinia graminis (wheat stem rust) (aka puccinia graminis)
D: wild emmer wheat (aka triticum dicoccoides)
E: gibbaeum hortenseae
F: barley (aka hordeum vulgare)
G: triticum
H: triticum aegilops (aka aegilops tauschii)
I: wood-barley (aka hordelymus europaeus)
J: gyge branchialis
K: one-grained wheat (aka triticum monococcum)
L: brachybacterium horti
M: gibellia cerealis (aka gibellina cerealis)
N: common wheat (aka triticum aestivum)
O: gibellina cerealis (gibellia cerealis) (aka gibellina cerealis)
P: bremia graminicola (aka graminivora graminicola)
Q: blumeria graminicola (blumeria graminis f. sp. poae) (aka blumeria graminicola)
R: cone wheat (aka triticum turgidum)
S: blumeria graminis (erysiphe graminis) (aka blumeria graminis)
T: None of the above. | [S; S; N; F] |
<Instruct>: Given the context 'These data suggest that B.g. tritici and B.g. hordei have co-evolved with their hosts during most of their evolutionary history after host divergence, possibly after a short phase of host expansion when the same pathogen could still grow on the two diverged hosts.
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [b.g. tritici; b.g. hordei]
<Options>: A: graminivora graminicola (bremia graminicola) (aka graminivora graminicola)
B: zymoseptoria tritici (mycosphaerella graminicola) (aka zymoseptoria tritici)
C: boarmia grisea (aka rikiosatoa grisea)
D: grass mildew (aka blumeria hordei)
E: blumeria graminis (erysiphe graminis) (aka blumeria graminis)
F: lederbergia graminis (bacillus graminis) (aka lederbergia graminis)
G: puccinia hordei
H: brachybacterium horti
I: None of the above. | [E; E] |
<Instruct>: Given the context 'These data suggest that B.g. tritici and B.g. hordei have co-evolved with their hosts during most of their evolutionary history after host divergence, possibly after a short phase of host expansion when the same pathogen could still grow on the two diverged hosts.
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [b.g. tritici; b.g. hordei]
<Options>: A: blumeria graminicola (blumeria graminis f. sp. poae) (aka blumeria graminicola)
B: erysiphe graminis (aka blumeria graminis)
C: blumeria avenae (blumeria graminis f. sp. avenae) (aka blumeria avenae)
D: blumeria graminis f. sp. bromi (aka blumeria bulbigera)
E: brachygeophilus truncorum (aka geophilus truncorum)
F: lederbergia graminis (bacillus graminis) (aka lederbergia graminis)
G: grass mildew (aka blumeria hordei)
H: gyge branchialis
I: blumeria graminis f. sp. triticale
J: None of the above. | [B; B] |
<Instruct>: Given the context 'Surrogate neutralization assays using sera from outbreaks and from immunized mice suggest that, as with influenza virus, antigenic variation maintains GII.4 persistence in the face of human population herd immunity.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [influenza virus; human]
<Options>: A: neandertal man (aka homo sapiens neanderthalensis)
B: homo (humans) (aka homo)
C: sphaeria humana (aka sordaria humana)
D: influenzavirus c (aka gammainfluenzavirus)
E: homo sapiens (human) (aka homo sapiens)
F: human louse (aka pediculus humanus)
G: influenza virus type a (aka influenza a virus)
H: influenzavirus (aka unidentified influenza virus)
I: swine influenza virus
J: influenza b virus (influenza virus type b) (aka influenza b virus)
K: None of the above. | [H; E] |
<Instruct>: Given the context 'Surrogate neutralization assays using sera from outbreaks and from immunized mice suggest that, as with influenza virus, antigenic variation maintains GII.4 persistence in the face of human population herd immunity.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [influenza virus; human]
<Options>: A: carcharhinus humani
B: neandertal (aka homo sapiens neanderthalensis)
C: unidentified influenza virus (avian influenza virus) (aka unidentified influenza virus)
D: influenza c viruses (aka influenza c virus)
E: sphaeria humana (aka sordaria humana)
F: glossus humanus (cardium humanum) (aka glossus humanus)
G: homo sapiens (human) (aka homo sapiens)
H: influenza b virus (influenza virus type b) (aka influenza b virus)
I: influenzavirus c (aka gammainfluenzavirus)
J: equine influenza virus
K: None of the above. | [C; G] |
<Instruct>: Given the context 'As with influenza virus, HIV, and hepatitis C virus, norovirus antigenic variation will significantly influence the design of efficacious vaccines and immunotherapeutics against these important human pathogens.
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [influenza virus; hepatitis c virus; human]
<Options>: A: alphainfluenzavirus (influenzavirus a) (aka alphainfluenzavirus)
B: hepatitis c-like viruses (aka hepacivirus)
C: hepatitis b virus type c (aka hepatitis b virus genotype c)
D: flucv (aka influenza c virus)
E: human influenza a virus (aka influenza a virus)
F: gymnopleurus humanus
G: hcv (aka hepacivirus hominis) (aka hepacivirus hominis)
H: hepatitis b virus, hbv (aka hepatitis b virus)
I: neandertal (aka homo sapiens neanderthalensis)
J: humans (aka homo)
K: influenzavirus (aka unidentified influenza virus)
L: human (aka homo sapiens)
M: influenza virus type b (aka influenza b virus)
N: hepatitis a virus (aka hepatovirus a)
O: human louse (aka pediculus humanus)
P: None of the above. | [K; G; L] |
<Instruct>: Given the context 'As with influenza virus, HIV, and hepatitis C virus, norovirus antigenic variation will significantly influence the design of efficacious vaccines and immunotherapeutics against these important human pathogens.
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [influenza virus; hepatitis c virus; human]
<Options>: A: pediculus humanus (human louse) (aka pediculus humanus)
B: hepatitis b virus type c (aka hepatitis b virus genotype c)
C: influenzavirus c (aka gammainfluenzavirus)
D: equine influenza virus
E: homo (humans) (aka homo)
F: hepatitis a virus (aka hepatovirus a)
G: homo sapiens (human) (aka homo sapiens)
H: human hepatitis c virus (aka hepacivirus hominis)
I: hepatitis b virus hbv (aka hepatitis b virus)
J: hepatitis c-like viruses (aka hepacivirus)
K: alphainfluenzavirus (influenzavirus a) (aka alphainfluenzavirus)
L: neanderthal man (aka homo sapiens neanderthalensis)
M: influenzavirus (aka unidentified influenza virus)
N: influenza virus type c (aka influenza c virus)
O: sphaeria humana (aka sordaria humana)
P: None of the above. | [M; H; G] |
<Instruct>: Given the context 'As with influenza virus, HIV, and hepatitis C virus, norovirus antigenic variation will significantly influence the design of efficacious vaccines and immunotherapeutics against these important human pathogens.
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [influenza virus; hepatitis c virus; human]
<Options>: A: equine influenza virus
B: gymnopleurus humanus
C: hepatitis c virus hcv (aka hepacivirus hominis)
D: human (aka homo sapiens)
E: hepatitis a virus (aka hepatovirus a)
F: hbv (aka hepatitis b virus) (aka hepatitis b virus)
G: flubv (aka influenza b virus)
H: influenzavirus (aka unidentified influenza virus)
I: homo (humans) (aka homo)
J: influenzavirus c (aka gammainfluenzavirus)
K: hepatitis c viruses (aka hepacivirus)
L: human hepatitis a virus (hhav (aka human hepatitis a virus))
M: influenza c viruses (aka influenza c virus)
N: cardium humanum (aka glossus humanus)
O: neandertal (aka homo sapiens neanderthalensis)
P: None of the above. | [H; C; D] |
<Instruct>: Given the context 'Cold stress contributes to aberrant cytokinesis during male meiosis I in a wheat thermosensitive genic male sterile line.
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [wheat]
<Options>: A: triticum aegilops (aka aegilops tauschii)
B: einkorn wheat (aka triticum monococcum)
C: wild emmer wheat (aka triticum dicoccoides)
D: bread wheat (aka triticum aestivum)
E: polish wheat (aka triticum polonicum)
F: None of the above. | [D] |
<Instruct>: Given the context 'The male sterility of a wheat thermosensitive genic male sterile (TGMS) line is strictly controlled by temperature.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [wheat]
<Options>: A: bread wheat (aka triticum aestivum)
B: triticum
C: triticum peregrinum (aka aegilops peregrina)
D: triticum tauschii (aka aegilops tauschii)
E: triticum triunciale (aka aegilops triuncialis)
F: None of the above. | [A] |
<Instruct>: Given the context 'The male sterility of a wheat thermosensitive genic male sterile (TGMS) line is strictly controlled by temperature.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [wheat]
<Options>: A: triticum
B: triticum peregrinum (aka aegilops peregrina)
C: triticum triunciale (aka aegilops triuncialis)
D: triticum tauschii (aka aegilops tauschii)
E: None of the above. | [E] |
<Instruct>: Given the context 'We report here a large-scale transcriptomic study using the Affymetrix wheat GeneChip to follow gene expression in BS366 line anthers in response to cold stress.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [wheat]
<Options>: A: common wheat (aka triticum aestivum)
B: wild emmer wheat (aka triticum dicoccoides)
C: triticum
D: one-grained wheat (aka triticum monococcum)
E: triticum peregrinum (aka aegilops peregrina)
F: None of the above. | [A] |
<Instruct>: Given the context 'Nicotiana benthamiana plants were infected with Potato virus X (PVX) and exposed to oxidative [either ultraviolet (UV-C) or H2O2] stress.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [nicotiana benthamiana; potato virus x; pvx]
<Options>: A: potato a potyvirus (aka potato virus a)
B: paracidovorax
C: phrynonax
D: nicotiana benthamiana
E: phomopsis vexans endornavirus 1
F: nicotiana umbratica
G: nicotiana tomentosa
H: potato virus b
I: nicotiana cavicola
J: physalis virus x
K: nicotiana excelsior
L: pvx (aka potato virus x) (aka potato virus x)
M: grapevine virus
N: potato yellowing virus
O: None of the above. | [D; L; L] |
<Instruct>: Given the context 'Nicotiana benthamiana plants were infected with Potato virus X (PVX) and exposed to oxidative [either ultraviolet (UV-C) or H2O2] stress.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [nicotiana benthamiana; potato virus x; pvx]
<Options>: A: nicotiana glutinosa
B: potato virus x (strain cp)
C: grapevine virus
D: paraberrapex
E: polix
F: potato virus x, pvx (aka potato virus x)
G: variovorax
H: nicotiana africana
I: nicotiana alata (ornamental tobacco) (aka nicotiana alata)
J: horsepox virus
K: potato virus x (strain xc)
L: nicotiana benthamiana
M: panicum virus
N: nicotiana solanifolia
O: None of the above. | [L; F; F] |
<Instruct>: Given the context 'Nicotiana benthamiana plants were infected with Potato virus X (PVX) and exposed to oxidative [either ultraviolet (UV-C) or H2O2] stress.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [nicotiana benthamiana; potato virus x; pvx]
<Options>: A: nicotiana tomentosa
B: potato virus x (strain uk3)
C: nicotiana cavicola
D: nicotiana benthamiana
E: phomopsis vexans endornavirus 1
F: physalis virus x
G: potato virus x (pvx (aka potato virus x))
H: nicotiana occidentalis
I: potato yellow vein virus
J: horse parapoxvirus
K: potato virus x (strain hb)
L: polix
M: potato virus x (strain cp)
N: common tobacco (aka nicotiana tabacum)
O: None of the above. | [D; G; G] |
<Instruct>: Given the context 'Nicotiana benthamiana plants were infected with Potato virus X (PVX) and exposed to oxidative [either ultraviolet (UV-C) or H2O2] stress.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [nicotiana benthamiana; potato virus x; pvx]
<Options>: A: phomopsis vexans endornavirus 1
B: polix
C: potato virus x (strain cp)
D: potato virus x (strain uk3)
E: nicotiana cavicola
F: physalis virus x
G: potato yellow vein virus
H: nicotiana tomentosa
I: nicotiana occidentalis
J: common tobacco (aka nicotiana tabacum)
K: nicotiana benthamiana
L: potato virus x (strain hb)
M: horse parapoxvirus
N: None of the above. | [K; N; N] |
<Instruct>: Given the context 'Dual Delta^1^3C/delta^1^8O response to water and nitrogen availability and its relationship with yield in field-grown durum wheat.
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [durum wheat]
<Options>: A: common wheat (aka triticum aestivum)
B: triticum peregrinum (aka aegilops peregrina)
C: durum wheat (aka triticum turgidum subsp. durum)
D: avena phleoides (aka trisetum phleoides)
E: brachypodium durum (aka elymus durus)
F: None of the above. | [C] |
<Instruct>: Given the context 'However, this method has not been applied to wheat grown under real field conditions.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [wheat]
<Options>: A: triticum aegilops (aka aegilops tauschii)
B: polish wheat (aka triticum polonicum)
C: canadian hard winter wheat (aka triticum aestivum)
D: triticum peregrinum (aka aegilops peregrina)
E: one-grained wheat (aka triticum monococcum)
F: None of the above. | [C] |
<Instruct>: Given the context 'Here, plant growth, grain yield (GY) and the associated agronomic components, carbon isotope discrimination (Delta^1^3C) plus oxygen isotope composition (delta^1^8O) as well as leaf and canopy gas exchange were measured in field-grown wheat subjected to different water and N availabilities.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [wheat]
<Options>: A: common wheat (aka triticum aestivum)
B: triticum aegilops (aka aegilops tauschii)
C: poulard wheat (aka triticum turgidum)
D: triticum
E: polish wheat (aka triticum polonicum)
F: None of the above. | [A] |
<Instruct>: Given the context 'Involvement of extracellular oxidative burst in salicylic acid-induced stomatal closure in Arabidopsis.
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [arabidopsis]
<Options>: A: arabidopsis arenosa (cardaminopsis arenosa) (aka arabidopsis arenosa)
B: arabidopsis thaliana (mouse-ear cress) (aka arabidopsis thaliana)
C: plantago africana
D: arabidopsis thaliana x arabidopsis arenosa
E: arabis lyrata (aka arabidopsis lyrata)
F: None of the above. | [B] |
<Instruct>: Given the context 'oscillations and inward-rectifying potassium (K+(in)) channel activity in Arabidopsis.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [arabidopsis]
<Options>: A: arabidopsis thaliana (mouse-ear cress) (aka arabidopsis thaliana)
B: arabis neglecta (aka arabidopsis neglecta)
C: plantago africana
D: euxoa agricola (noctua agricola) (aka euxoa agricola)
E: arabidopsis thaliana x arabidopsis halleri
F: None of the above. | [A] |
<Instruct>: Given the context 'Characterization of an omega-class glutathione S-transferase in the stress response of the silkmoth.
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [silkmoth]
<Options>: A: silkworm (aka bombyx mori)
B: wild silkworm (aka bombyx mandarina)
C: silk tree (aka albizia julibrissin)
D: oak silkmoth (aka antheraea pernyi)
E: bombyx virginica (aka spilosoma virginicum)
F: None of the above. | [A] |
<Instruct>: Given the context 'Using real-time PCR, mRNA encoding an omega-class GST of Bombyx mori (bmGSTO) was shown to be induced after exposure to various environmental stresses.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [bombyx mori]
<Options>: A: bombyx catax (aka eriogaster catax)
B: bombus pomorum (bremus pomorum) (aka bombus pomorum)
C: bombyx
D: bombus muscorum
E: silkworm (aka bombyx mori)
F: None of the above. | [E] |
<Instruct>: Given the context 'A soluble form of recombinant protein (rbmGSTO) was functionally overexpressed in Escherichia coli cells and purified to homogeneity.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [escherichia coli]
<Options>: A: escherichia coli nissle 1917 (escherichia coli strain nissle 1917) (aka escherichia coli nissle 1917)
B: escherichia coli 97.1742
C: escherichia coli 99.1793
D: enterobacter aerogenes (aka klebsiella aerogenes)
E: bacterium coli commune (aka escherichia coli)
F: None of the above. | [E] |
<Instruct>: Given the context 'Social immunity in honeybees (Apis mellifera): transcriptome analysis of varroa-hygienic behaviour.
Honeybees have evolved a social immunity consisting of the cooperation of individuals to decrease disease in the hive.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [honeybees; apis mellifera]
<Options>: A: honey bees (aka apinae)
B: dwarf honeybee (aka apis florea)
C: german honeybee (aka apis mellifera mellifera)
D: apis cerana (apis mellifera cerana) (aka apis cerana)
E: apis mellifera caucasica (caucasian honeybee) (aka apis mellifera caucasica)
F: rock honeybee (aka apis dorsata)
G: common honeybee (aka apis mellifera ligustica)
H: asiatic honeybee (aka apis cerana)
I: honey bee (aka apis mellifera)
J: None of the above. | [I; I] |
<Instruct>: Given the context 'Social immunity in honeybees (Apis mellifera): transcriptome analysis of varroa-hygienic behaviour.
Honeybees have evolved a social immunity consisting of the cooperation of individuals to decrease disease in the hive.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [honeybees; apis mellifera]
<Options>: A: apis cerana (apis mellifera cerana) (aka apis cerana)
B: apis mellifera caucasica (caucasian honeybee) (aka apis mellifera caucasica)
C: rock honeybee (aka apis dorsata)
D: honey bees (aka apinae)
E: asiatic honeybee (aka apis cerana)
F: german honeybee (aka apis mellifera mellifera)
G: common honeybee (aka apis mellifera ligustica)
H: dwarf honeybee (aka apis florea)
I: None of the above. | [I; I] |
<Instruct>: Given the context 'Social immunity in honeybees (Apis mellifera): transcriptome analysis of varroa-hygienic behaviour.
Honeybees have evolved a social immunity consisting of the cooperation of individuals to decrease disease in the hive.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [honeybees; apis mellifera]
<Options>: A: apis mellifera caucasica (caucasian honeybee) (aka apis mellifera caucasica)
B: western honey bee (aka apis mellifera)
C: apis terrestris (aka bombus terrestris)
D: little honeybee (aka apis florea)
E: eastern honeybee (aka apis cerana)
F: oriental honeybee (aka apis cerana)
G: common honeybee (aka apis mellifera ligustica)
H: honey bees (aka apinae)
I: None of the above. | [B; B] |
<Instruct>: Given the context 'However, comparing their genomic profile with those from other behaviours suggests a link with brood care and the highly varroa-hygienic Africanized honeybees.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [africanized honeybees]
<Options>: A: german honeybee (aka apis mellifera mellifera)
B: oriental honeybee (aka apis cerana)
C: european honey bee (aka apis mellifera)
D: apis mellifera caucasica (caucasian honeybee) (aka apis mellifera caucasica)
E: african honeybee (aka apis mellifera scutellata)
F: None of the above. | [C] |
<Instruct>: Given the context 'Causal involvement of mammalian-type cryptochrome in the circadian cuticle deposition rhythm in the bean bug Riptortus pedestris.
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [bean bug; riptortus pedestris]
<Options>: A: black bean aphid (aka aphis fabae)
B: leucophyes pedestris
C: bean bug (aka riptortus pedestris)
D: sirthenea pedestris
E: chrysolina pedestris
F: bactrocera infesta (aka zeugodacus infestus)
G: grain aphid (aka sitobion avenae)
H: orthocladius pedestris
I: bean pod borer (aka maruca testulalis)
J: None of the above. | [C; C] |
<Instruct>: Given the context 'Causal involvement of mammalian-type cryptochrome in the circadian cuticle deposition rhythm in the bean bug Riptortus pedestris.
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [bean bug; riptortus pedestris]
<Options>: A: bactrocera infesta (aka zeugodacus infestus)
B: bean pod borer (aka maruca testulalis)
C: bean bug (aka riptortus pedestris)
D: zelus pedestris
E: carabus pedestris (aka anthelephila pedestris)
F: cabbage fly (aka delia brassica)
G: pardalaspis pedestris (aka ceratitis pedestris)
H: black bean aphid (aka aphis fabae)
I: orthocladius pedestris
J: None of the above. | [C; C] |
<Instruct>: Given the context 'In the present study, we show that RNA interference (RNAi) targeting of cry-m in the bean bug Riptortus pedestris disrupts the circadian clock governing the cuticle deposition rhythm and results in the generation of a single cuticle layer.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [bean bug; riptortus pedestris]
<Options>: A: leucophyes pedestris
B: bean fly (aka ophiomyia phaseoli)
C: melanophora pedestris (aka trachyzelotes pedestris)
D: pardalaspis pedestris (aka ceratitis pedestris)
E: boraria infesta
F: chrysolina pedestris
G: agrotera citrina
H: bean bug (aka riptortus pedestris)
I: bactrocera infesta (aka zeugodacus infestus)
J: None of the above. | [H; H] |
<Instruct>: Given the context 'In the present study, we show that RNA interference (RNAi) targeting of cry-m in the bean bug Riptortus pedestris disrupts the circadian clock governing the cuticle deposition rhythm and results in the generation of a single cuticle layer.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [bean bug; riptortus pedestris]
<Options>: A: cabbage fly (aka delia brassica)
B: bean pod borer (aka maruca testulalis)
C: acanthaspis pedestris
D: bean bug (aka riptortus pedestris)
E: melanophora pedestris (aka trachyzelotes pedestris)
F: boraria infesta
G: tea seed bug (aka poecilocoris latus)
H: atritermus pedestris
I: parancistrocerus pedestris
J: None of the above. | [D; D] |
<Instruct>: Given the context 'Introns, alternative splicing, spliced leader trans-splicing and differential expression of pcna and cyclin in Perkinsus marinus.
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [perkinsus marinus]
<Options>: A: perkinsus marinus
B: tepidicaulis marinus
C: perkinsus mediterraneus
D: parahaliea maris
E: pseudodiaptomus marinus
F: None of the above. | [A] |
<Instruct>: Given the context 'To gain understanding on the structure and regulation of growth-related genes of the parasitic alveolate Perkinsus marinus, we analyzed genes encoding proliferating cell nuclear antigen (pcna) and cyclins (cyclin).', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [perkinsus marinus]
<Options>: A: perkinsus mediterraneus
B: perkinsus marinus
C: chorthippus maritimus
D: safagamyces marinus
E: parahaliea maris
F: None of the above. | [B] |
<Instruct>: Given the context 'Stress-induced pseudocyst formation--a newly identified mechanism of protection against organic solvents in acanthamoebae of the T4 genotype.
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [t4]
<Options>: A: trithyreus
B: thysanoteuthis rhombus (diamond squid) (aka thysanoteuthis rhombus)
C: thyropeus
D: thyropus
E: thryothorus
F: None of the above. | [F] |
<Instruct>: Given the context 'Development and validation of a lateral flow immunoassay using colloidal gold for the identification of serotype-specific foot-and-mouth disease virus O, A and Asia 1.
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [foot-and-mouth disease virus o; a; asia 1]
<Options>: A: foot-and-mouth disease virus type o fmdv (aka foot-and-mouth disease virus o)
B: aedes rhabdovirus 1
C: foot and mouth disease virus (aka foot-and-mouth disease virus)
D: asiadodis
E: orientia
F: arua
G: anillomyrma
H: ammathella
I: foot-and-mouth disease virus (strain o1)
J: athesis acrisione acrisione
K: fmdv-c (aka foot and mouth disease virus c)
L: asiabregma
M: foot-and-mouth disease virus a (foot-and-mouth disease virus - type a) (aka foot-and-mouth disease virus a)
N: acrophylax
O: asteroid ambidensovirus 1
P: None of the above. | [C; C; C] |
<Instruct>: Given the context 'Development and validation of a lateral flow immunoassay using colloidal gold for the identification of serotype-specific foot-and-mouth disease virus O, A and Asia 1.
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [foot-and-mouth disease virus o; a; asia 1]
<Options>: A: foot-and-mouth disease virus o (foot-and-mouth disease virus type o fmdv) (aka foot-and-mouth disease virus o)
B: foot-and-mouth disease virus (strain o1)
C: theorema
D: subgroup a
E: arua
F: foot-and-mouth disease virus (fmdv (aka foot-and-mouth disease virus))
G: axis porcinus gammaherpesvirus 1
H: avena
I: ara
J: orientallactaga
K: foot-and-mouth disease virus c (aka foot and mouth disease virus c)
L: orientia
M: foot-and-mouth disease virus type a (aka foot-and-mouth disease virus a)
N: ammathella
O: anativirus a1
P: None of the above. | [F; F; F] |
<Instruct>: Given the context 'Development and validation of a lateral flow immunoassay using colloidal gold for the identification of serotype-specific foot-and-mouth disease virus O, A and Asia 1.
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [foot-and-mouth disease virus o; a; asia 1]
<Options>: A: arua
B: subgroup a
C: foot-and-mouth disease virus o (foot-and-mouth disease virus type o fmdv) (aka foot-and-mouth disease virus o)
D: theorema
E: avena
F: ammathella
G: orientia
H: foot-and-mouth disease virus c (aka foot and mouth disease virus c)
I: ara
J: axis porcinus gammaherpesvirus 1
K: orientallactaga
L: anativirus a1
M: foot-and-mouth disease virus (strain o1)
N: foot-and-mouth disease virus type a (aka foot-and-mouth disease virus a)
O: None of the above. | [O; O; O] |
<Instruct>: Given the context 'Development and validation of a lateral flow immunoassay using colloidal gold for the identification of serotype-specific foot-and-mouth disease virus O, A and Asia 1.
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [foot-and-mouth disease virus o; a; asia 1]
<Options>: A: ava
B: foot and mouth disease virus c (foot-and-mouth disease virus - type c) (aka foot and mouth disease virus c)
C: foot-and-mouth disease virus - type o (aka foot-and-mouth disease virus o)
D: athesis acrisione acrisione
E: orientus
F: ania
G: asianopis
H: orientatractis
I: anularya
J: austroselasia
K: alexa
L: foot and mouth disease virus fmdv (aka foot-and-mouth disease virus)
M: foot-and-mouth disease virus (strain o1)
N: foot-and-mouth disease virus type a (aka foot-and-mouth disease virus a)
O: goose astrovirus 1
P: None of the above. | [L; L; L] |
<Instruct>: Given the context 'A lateral flow immunoassay (LFI) was developed to identify and diagnose foot-and-mouth disease virus (FMDV) serotypes O, A and Asia 1.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [foot-and-mouth disease virus; fmdv; o; a]
<Options>: A: anillus
B: anura (frogs and toads) (aka anura)
C: athesis acrisione acrisione
D: aoa
E: fmdv-a (aka foot-and-mouth disease virus a)
F: oriolus laetior (aka oriolus brachyrynchus laetior)
G: oco
H: ara
I: foot-and-mouth disease virus - type a (aka foot-and-mouth disease virus a)
J: foot-and-mouth disease virus c (aka foot and mouth disease virus c)
K: ooia
L: oocystella
M: foot-and-mouth disease virus (strain o1)
N: odo
O: foot-and-mouth disease virus o (foot-and-mouth disease virus type o fmdv) (aka foot-and-mouth disease virus o)
P: foot and mouth disease virus (aka foot-and-mouth disease virus)
Q: fmdv-asia1 (aka foot-and-mouth disease virus asia 1)
R: None of the above. | [P; P; P; P] |
<Instruct>: Given the context 'A lateral flow immunoassay (LFI) was developed to identify and diagnose foot-and-mouth disease virus (FMDV) serotypes O, A and Asia 1.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [foot-and-mouth disease virus; fmdv; o; a]
<Options>: A: oodinus
B: foot-and-mouth disease virus - type a (aka foot-and-mouth disease virus a)
C: foot-and-mouth disease virus (strain o1)
D: alphaea
E: fmdv-asia1 (aka foot-and-mouth disease virus asia 1)
F: oomyces
G: oolithotus
H: oostethus
I: fmdv-c (aka foot and mouth disease virus c)
J: fmdv (aka foot-and-mouth disease virus) (aka foot-and-mouth disease virus)
K: archaeon a1
L: foot-and-mouth disease virus c (aka foot and mouth disease virus c)
M: ania
N: foot-and-mouth disease virus a (foot-and-mouth disease virus - type a) (aka foot-and-mouth disease virus a)
O: alexa
P: foot-and-mouth disease virus-type o (aka foot-and-mouth disease virus o)
Q: oodoptera
R: acrophylax
S: None of the above. | [J; J; J; J] |
<Instruct>: Given the context 'A lateral flow immunoassay (LFI) was developed to identify and diagnose foot-and-mouth disease virus (FMDV) serotypes O, A and Asia 1.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [foot-and-mouth disease virus; fmdv; o; a]
<Options>: A: alphaea
B: ammathella
C: oomyces
D: oodes
E: odo
F: foot and mouth disease virus (aka foot-and-mouth disease virus)
G: swine vesicular disease virus
H: arua
I: fmdv-c (aka foot and mouth disease virus c)
J: foot-and-mouth disease virus (strain o1)
K: archaeon a1
L: oomycetes (aka oomycota)
M: oomorphus
N: subgroup a
O: foot-and-mouth disease virus o (foot-and-mouth disease virus type o fmdv) (aka foot-and-mouth disease virus o)
P: foot-and-mouth disease virus - type o (aka foot-and-mouth disease virus o)
Q: foot-and-mouth disease virus c (aka foot and mouth disease virus c)
R: foot-and-mouth disease virus type a (aka foot-and-mouth disease virus a)
S: None of the above. | [F; F; F; F] |
<Instruct>: Given the context 'A lateral flow immunoassay (LFI) was developed to identify and diagnose foot-and-mouth disease virus (FMDV) serotypes O, A and Asia 1.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [foot-and-mouth disease virus; fmdv; o; a]
<Options>: A: oomorphus
B: aa
C: fmdv-c (aka foot and mouth disease virus c)
D: foot-and-mouth disease virus a (foot-and-mouth disease virus - type a) (aka foot-and-mouth disease virus a)
E: oomycetes (aka oomycota)
F: alphaea
G: foot-and-mouth disease virus type o (aka foot-and-mouth disease virus o)
H: alexa
I: aphthovirus a (aka foot-and-mouth disease virus a)
J: oodoptera
K: fmdv-asia1 (aka foot-and-mouth disease virus asia 1)
L: ania
M: foot-and-mouth disease virus fmdv (aka foot-and-mouth disease virus)
N: oosoma
O: foot-and-mouth disease virus (strain o1)
P: athesis acrisione acrisione
Q: orus
R: foot-and-mouth disease virus o (foot-and-mouth disease virus type o fmdv) (aka foot-and-mouth disease virus o)
S: None of the above. | [M; M; M; M] |
<Instruct>: Given the context 'A lateral flow immunoassay (LFI) was developed to identify and diagnose foot-and-mouth disease virus (FMDV) serotypes O, A and Asia 1.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [asia 1]
<Options>: A: asteroid ambidensovirus 1
B: aedes rhabdovirus 1
C: anatlanticus
D: austroselasia
E: orientus
F: None of the above. | [F] |
<Instruct>: Given the context 'Antibodies obtained from rabbits and guinea pigs immunized with cell-culture-adapted virus strains (O/CHA/99, A/GS/LX/66, Asia 1/CHN/05) and suckling-mouse adapted virus strains (O/AV99(L), A/AV88(L), Asia 1/YNBS/58) were used as capture antibodies.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [rabbits; o/cha/99; a/gs/lx/66; asia 1/chn/05]
<Options>: A: oryctolagus cuniculus cuniculus (lepus cuniculus cuniculus) (aka oryctolagus cuniculus cuniculus)
B: norovirus hu/chn2625/gzh99
C: rabbits and hares (aka leporidae)
D: rotavirus a hu/sa731dgm/05/g12p[6]
E: hoa
F: rabbits (aka oryctolagus cuniculus)
G: riverine rabbit (aka bunolagus monticularis)
H: adelotettix
I: xolalges
J: norovirus hu/chn2139/cc99
K: ocoaxo
L: adenovirus squirrel/gbr/sg-2012
M: rat astrovirus ne/fg045/yunnan
N: norovirus hu/chn2809/km00
O: alternanthera yellow vein alphasatellite
P: norovirus hu/jsnt15033/chn
Q: norovirus hu/chn2929/gzh00
R: rabbit ear mite (aka psoroptes ovis)
S: norovirus hu/noguchi-5/2000/gh
T: None of the above. | [F; T; T; T] |
<Instruct>: Given the context 'Antibodies obtained from rabbits and guinea pigs immunized with cell-culture-adapted virus strains (O/CHA/99, A/GS/LX/66, Asia 1/CHN/05) and suckling-mouse adapted virus strains (O/AV99(L), A/AV88(L), Asia 1/YNBS/58) were used as capture antibodies.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [rabbits; o/cha/99; a/gs/lx/66; asia 1/chn/05]
<Options>: A: rat astrovirus ne/fg048/yunnan
B: rotavirus a hu/sa731dgm/05/g12p[6]
C: rabbits and hares (aka leporidae)
D: shrew astrovirus ca/fg184/yunnan
E: pygmy rabbit (aka brachylagus idahoensis)
F: foot-and-mouth disease virus asia/irn/05
G: linospadix
H: norovirus hu/chn2841/km99
I: european rabbit (aka oryctolagus cuniculus)
J: olax
K: norovirus hu/chn3931/km00
L: xolalges
M: adelotettix
N: norovirus hu/noguchi-5/2000/gh
O: lepus cuniculus cuniculus (aka oryctolagus cuniculus cuniculus)
P: rabbit ear mite (aka psoroptes ovis)
Q: norovirus oyster/zhuhai 5/chn
R: norovirus hu/chn2122/cc99
S: avian rotavirus chicken/ar/sep-841/05
T: norovirus hu/chn2139/cc99
U: None of the above. | [I; U; U; U] |
<Instruct>: Given the context 'Antibodies obtained from rabbits and guinea pigs immunized with cell-culture-adapted virus strains (O/CHA/99, A/GS/LX/66, Asia 1/CHN/05) and suckling-mouse adapted virus strains (O/AV99(L), A/AV88(L), Asia 1/YNBS/58) were used as capture antibodies.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [rabbits; o/cha/99; a/gs/lx/66; asia 1/chn/05]
<Options>: A: xolalges
B: ocoaxo
C: nostoc calcicola 99
D: adelotettix
E: norovirus hu/chn42951/cz05
F: aplotaxis foliosa (aka saussurea foliosa)
G: pygmy rabbit (aka brachylagus idahoensis)
H: rabbit ear mite (aka psoroptes ovis)
I: japanese white rabbit (aka oryctolagus cuniculus)
J: shrew astrovirus ca/fg184/yunnan
K: olax
L: norovirus oyster/zhuhai 5/chn
M: avian rotavirus chicken/ar/sep-841/05
N: aylax
O: scrub hare (aka lepus saxatilis)
P: o'hara headland virus
Q: rat astrovirus ne/fg047/yunnan
R: norovirus chanthaburi-75/thailand
S: swamp rabbit (aka sylvilagus aquaticus)
T: orf virus ov/mi-90
U: None of the above. | [I; U; U; U] |
<Instruct>: Given the context 'Antibodies obtained from rabbits and guinea pigs immunized with cell-culture-adapted virus strains (O/CHA/99, A/GS/LX/66, Asia 1/CHN/05) and suckling-mouse adapted virus strains (O/AV99(L), A/AV88(L), Asia 1/YNBS/58) were used as capture antibodies.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [rabbits; o/cha/99; a/gs/lx/66; asia 1/chn/05]
<Options>: A: norovirus hu/chn2121/cc99
B: adelotettix
C: aglaomorpha leporella (aka aglaomorpha x leporella)
D: norovirus hu/chn2792/lzh99
E: rabbit ear mite (aka psoroptes ovis)
F: sapovirus d1736-a/jun2008/jpn
G: scrub hare (aka lepus saxatilis)
H: sylvilagus palustris (lepus palustris) (aka sylvilagus palustris)
I: alternanthera yellow vein alphasatellite
J: rat astrovirus ne/fg048/yunnan
K: norovirus hu/chn3931/km00
L: rotavirus a hu/sa731dgm/05/g12p[6]
M: oryctolagus cuniculus cuniculus (lepus cuniculus cuniculus) (aka oryctolagus cuniculus cuniculus)
N: oryctolagus cuniculus (japanese white rabbit) (aka oryctolagus cuniculus)
O: norovirus hu/chn2929/gzh00
P: norovirus nongkhai-51/thailand
Q: hoa
R: norovirus hu/chn2625/gzh99
S: rat astrovirus ne/fg045/yunnan
T: norovirus hu/chn2851/km99
U: None of the above. | [N; U; U; U] |
<Instruct>: Given the context 'Antibodies obtained from rabbits and guinea pigs immunized with cell-culture-adapted virus strains (O/CHA/99, A/GS/LX/66, Asia 1/CHN/05) and suckling-mouse adapted virus strains (O/AV99(L), A/AV88(L), Asia 1/YNBS/58) were used as capture antibodies.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [mouse; o/av99(l); a/av88(l); asia 1/ynbs/58]
<Options>: A: alternavirus aspergilli
B: avian reovirus nli12 96m
C: mus musculus (house mouse) (aka mus musculus)
D: avian reovirus nla09 96m
E: mus macedonicus (macedonian mouse) (aka mus macedonicus)
F: ava
G: arthropod orthomyxo-like virus
H: asikkala virus (aka orthohantavirus asikkalaense)
I: bat astrovirus mek/yn/hwbc3
J: aalivirus a1 (duck picornavirus strain gl/12) (aka aalivirus a1)
K: mus terricolor (earth-colored mouse) (aka mus terricolor)
L: letis
M: bovine astrovirus ch13/neuros1
N: avian reovirus nla18 97m
O: sapovirus pig/ab7/can
P: aeromonas phage assk
Q: western wild mouse (aka mus spretus)
R: brucella abortus 65/157
S: olive virus o
T: mice (aka mus <genus>) (aka mus <genus>)
U: None of the above. | [C; U; U; U] |
<Instruct>: Given the context 'Antibodies obtained from rabbits and guinea pigs immunized with cell-culture-adapted virus strains (O/CHA/99, A/GS/LX/66, Asia 1/CHN/05) and suckling-mouse adapted virus strains (O/AV99(L), A/AV88(L), Asia 1/YNBS/58) were used as capture antibodies.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [mouse; o/av99(l); a/av88(l); asia 1/ynbs/58]
<Options>: A: sapovirus pig/ab7/can
B: avian reovirus nla09 96m
C: mus terricolor (earth-colored mouse) (aka mus terricolor)
D: letis
E: aalivirus a1 (duck picornavirus strain gl/12) (aka aalivirus a1)
F: avian reovirus nli12 96m
G: olive virus o
H: arthropod orthomyxo-like virus
I: mice (aka mus <genus>) (aka mus <genus>)
J: bat astrovirus mek/yn/hwbc3
K: mus macedonicus (macedonian mouse) (aka mus macedonicus)
L: asikkala virus (aka orthohantavirus asikkalaense)
M: western wild mouse (aka mus spretus)
N: bovine astrovirus ch13/neuros1
O: brucella abortus 65/157
P: avian reovirus nla18 97m
Q: aeromonas phage assk
R: alternavirus aspergilli
S: ava
T: None of the above. | [T; T; T; T] |
<Instruct>: Given the context 'Antibodies obtained from rabbits and guinea pigs immunized with cell-culture-adapted virus strains (O/CHA/99, A/GS/LX/66, Asia 1/CHN/05) and suckling-mouse adapted virus strains (O/AV99(L), A/AV88(L), Asia 1/YNBS/58) were used as capture antibodies.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [mouse; o/av99(l); a/av88(l); asia 1/ynbs/58]
<Options>: A: avian adeno-associated virus strain da-1
B: avian reovirus nla08 96m
C: yunnan tick totiviridae yn 171
D: mouse (aka mus musculus)
E: olive virus o
F: macedonian mouse (aka mus macedonicus)
G: western wild mouse (aka mus spretus)
H: alternavirus aspergilli
I: avian reovirus 99g
J: sonahax virus
K: brucella abortus 65/157
L: asikkala virus (aka orthohantavirus asikkalaense)
M: duck adeno-associated virus
N: brucella suis 63/261
O: o'leary virus
P: avga
Q: bat astrovirus mek/yn/hwbc3
R: avian reovirus nli12 96m
S: mus molossinus (aka mus musculus molossinus)
T: mouse (aka mus <genus>)
U: None of the above. | [D; U; U; U] |
<Instruct>: Given the context 'Antibodies obtained from rabbits and guinea pigs immunized with cell-culture-adapted virus strains (O/CHA/99, A/GS/LX/66, Asia 1/CHN/05) and suckling-mouse adapted virus strains (O/AV99(L), A/AV88(L), Asia 1/YNBS/58) were used as capture antibodies.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [mouse; o/av99(l); a/av88(l); asia 1/ynbs/58]
<Options>: A: ava
B: avian reovirus nla13 96t
C: mouse (aka mus musculus)
D: letis
E: duck flavivirus strain yy5
F: brucella abortus 65/157
G: brucella suis 63/261
H: hymenopteran arli-related virus okiav99
I: aeromonas phage assk
J: avian reovirus nli02 98m
K: western european house mouse (aka mus musculus domesticus)
L: aeromonas phage av10aa
M: mus musculus musculus (eastern european house mouse) (aka mus musculus musculus)
N: macedonian mouse (aka mus macedonicus)
O: avian reovirus nli12 96m
P: mus musculus castaneus (southeastern asian house mouse) (aka mus musculus castaneus)
Q: aaav vr-865 (aka avian adeno-associated virus atcc vr-865)
R: sanya ochthera mantis totivirus 1
S: avian reovirus 99g
T: anativirus a1
U: None of the above. | [C; U; U; U] |
<Instruct>: Given the context 'Antibodies obtained from rabbits and guinea pigs immunized with cell-culture-adapted virus strains (O/CHA/99, A/GS/LX/66, Asia 1/CHN/05) and suckling-mouse adapted virus strains (O/AV99(L), A/AV88(L), Asia 1/YNBS/58) were used as capture antibodies.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [mouse; o/av99(l); a/av88(l); asia 1/ynbs/58]
<Options>: A: western wild mouse (aka mus spretus)
B: brucella abortus 65/110
C: avipoxvirus isolate oregon
D: mus musculus domesticus (western european house mouse) (aka mus musculus domesticus)
E: avian reovirus 99g
F: avian reovirus nli12 96m
G: arthropod orthomyxo-like virus
H: adeno-associated virus rh.8
I: duck picornavirus strain gl/12 (aka aalivirus a1)
J: bat astrovirus myl/yn/hsac2
K: mus musculus (house mouse) (aka mus musculus)
L: avian associated picorna-like virus 38
M: southeastern asian house mouse (aka mus musculus castaneus)
N: yunnan tick totiviridae yn 171
O: aeromonas phage av10aa
P: avian reovirus nla11 96m
Q: aeromonas phage assk
R: sapovirus pig/ab7/can
S: sanya ochthera mantis totivirus 1
T: mus musculus musculus (eastern european house mouse) (aka mus musculus musculus)
U: None of the above. | [K; U; U; U] |
<Instruct>: Given the context 'The diagnostic kit included three immunochromatographic strips of types O, A and Asia 1, and the type-specific results were confirmed by color on the test lines of the three strips.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [o; a; asia 1]
<Options>: A: oomyces
B: anatlanticus
C: oobius
D: avena
E: oomorphus
F: arua
G: orientus
H: insect-associated tymovirus 1
I: orientatractis
J: ammathella
K: athesis acrisione acrisione
L: oomorphoides
M: oriolus laetior (aka oriolus brachyrynchus laetior)
N: ara
O: anura (frogs and toads) (aka anura)
P: None of the above. | [P; P; P] |
<Instruct>: Given the context 'The diagnostic kit included three immunochromatographic strips of types O, A and Asia 1, and the type-specific results were confirmed by color on the test lines of the three strips.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [o; a; asia 1]
<Options>: A: oophila
B: oco
C: oomorphus
D: insect-associated tymovirus 1
E: austroselasia
F: aa
G: oocystella
H: ooencyrtus
I: asteroid ambidensovirus 1
J: sia
K: acrophylax
L: orienticius
M: aoa
N: theorema
O: ava
P: None of the above. | [P; P; P] |
<Instruct>: Given the context 'The diagnostic kit included three immunochromatographic strips of types O, A and Asia 1, and the type-specific results were confirmed by color on the test lines of the three strips.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [o; a; asia 1]
<Options>: A: orientallactaga
B: anillomyrma
C: orienticius
D: ania
E: orientus
F: oriolus oryzivorus (aka molothrus oryzivorus)
G: aoa
H: oodes
I: orus
J: anopheles a serogroup (aka anopheles a virus)
K: oodinus
L: theorema
M: goose astrovirus 1
N: asiabregma
O: oomorphoides
P: None of the above. | [P; P; P] |
<Instruct>: Given the context 'The diagnostic sensitivity of the LFI for FMDV serotypes O, A and Asia 1 was 88.3% compared to 89.7% obtained by the reference method of indirect-sandwich ELISA.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [fmdv; o; a; asia 1]
<Options>: A: acrophylax
B: oomorphus
C: foot-and-mouth disease virus c (aka foot and mouth disease virus c)
D: orus
E: anillus
F: axis porcinus gammaherpesvirus 1
G: foot-and-mouth disease virus fmdv (aka foot-and-mouth disease virus)
H: aedes rhabdovirus 1
I: oophila
J: theorema
K: avena
L: anura (frogs and toads) (aka anura)
M: oomycetes (aka oomycota)
N: fmdv-a (aka foot-and-mouth disease virus a)
O: foot-and-mouth disease virus type o (aka foot-and-mouth disease virus o)
P: alphaea
Q: oocystella
R: orientallactaga
S: swine vesicular disease virus
T: insect-associated tymovirus 1
U: None of the above. | [G; G; G; G] |
<Instruct>: Given the context 'The diagnostic sensitivity of the LFI for FMDV serotypes O, A and Asia 1 was 88.3% compared to 89.7% obtained by the reference method of indirect-sandwich ELISA.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [fmdv; o; a; asia 1]
<Options>: A: oco
B: avena
C: oomyces
D: ammathella
E: anopheles a serogroup (aka anopheles a virus)
F: arua
G: fmdv (aka foot-and-mouth disease virus) (aka foot-and-mouth disease virus)
H: areae
I: orientatractis
J: fmdv-asia1 (aka foot-and-mouth disease virus asia 1)
K: oodes
L: oomycetes (aka oomycota)
M: foot-and-mouth disease virus c (aka foot and mouth disease virus c)
N: austroselasia
O: swine vesicular disease virus
P: aedes rhabdovirus 1
Q: aphthovirus o (aka foot-and-mouth disease virus o)
R: asiadodis
S: anura (frogs and toads) (aka anura)
T: oodoptera
U: None of the above. | [G; G; G; G] |
<Instruct>: Given the context 'The diagnostic sensitivity of the LFI for FMDV serotypes O, A and Asia 1 was 88.3% compared to 89.7% obtained by the reference method of indirect-sandwich ELISA.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [fmdv; o; a; asia 1]
<Options>: A: oodinus
B: ara
C: orientallactaga
D: aphthovirus o (aka foot-and-mouth disease virus o)
E: oodoptera
F: oodes
G: ava
H: alexa
I: sia
J: fmdv-asia1 (aka foot-and-mouth disease virus asia 1)
K: aedes rhabdovirus 1
L: avena
M: oostethus
N: oocystella
O: swine vesicular disease virus
P: axis porcinus gammaherpesvirus 1
Q: foot-and-mouth disease virus (strain o1)
R: ammathella
S: foot-and-mouth disease virus (fmdv (aka foot-and-mouth disease virus))
T: anillomyrma
U: None of the above. | [S; S; S; S] |
<Instruct>: Given the context 'The diagnostic sensitivity of the LFI for FMDV serotypes O, A and Asia 1 was 88.3% compared to 89.7% obtained by the reference method of indirect-sandwich ELISA.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [fmdv; o; a; asia 1]
<Options>: A: arua
B: oodoptera
C: aedes rhabdovirus 1
D: avena
E: subgroup a
F: foot-and-mouth disease virus type a (aka foot-and-mouth disease virus a)
G: theorema
H: anillomyrma
I: foot and mouth disease virus fmdv (aka foot-and-mouth disease virus)
J: swine vesicular disease virus
K: foot-and-mouth disease virus (strain o1)
L: anillus
M: oomyces
N: oolithotus
O: foot-and-mouth disease virus c (aka foot and mouth disease virus c)
P: asiadodis
Q: oodes
R: orus
S: orientia
T: asiabregma
U: None of the above. | [I; I; I; I] |
<Instruct>: Given the context 'The sensitivity of the LFI for FMDV type Asia 1 was higher at 92.1% compared to 90.5% for the ELISA.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [fmdv type asia 1]
<Options>: A: fmdv-sat3 (aka foot-and-mouth disease virus sat 3)
B: fmdv-a (aka foot-and-mouth disease virus a)
C: duck influenza virus
D: foot and mouth disease virus (aka foot-and-mouth disease virus)
E: fmdv-c (aka foot and mouth disease virus c)
F: None of the above. | [D] |
<Instruct>: Given the context 'A new method for detection of pandemic influenza virus using High Resolution Melting analysis of the neuraminidase gene.
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [pandemic influenza virus]
<Options>: A: h1n1 swine influenza virus
B: influenza a virus (a/china)
C: influenza virus type a (aka influenza a virus)
D: influenza virus (aka unidentified influenza virus)
E: influenzavirus d (aka deltainfluenzavirus)
F: None of the above. | [C] |
<Instruct>: Given the context 'Diagnostic methods based upon exclusive detection of haemagglutinin do not detect sequence variation in other gene segments of the Influenza A virus.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [influenza a virus]
<Options>: A: h1n1 swine influenza virus
B: fluav (aka influenza a virus)
C: influenza a virus (a/china)
D: duck influenza virus
E: influenza virus (aka unidentified influenza virus)
F: None of the above. | [B] |
<Instruct>: Given the context 'Diagnostic methods based upon exclusive detection of haemagglutinin do not detect sequence variation in other gene segments of the Influenza A virus.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [influenza a virus]
<Options>: A: influenza virus (aka unidentified influenza virus)
B: h1n1 swine influenza virus
C: influenza a virus (a/china)
D: duck influenza virus
E: None of the above. | [E] |
<Instruct>: Given the context 'Independent duplications of alpha-amylase in different strains of Aspergillus oryzae.
Aspergillus oryzae is a filamentous fungus that has arisen through the ancient domestication of Aspergillus flavus for making traditional oriental foods and beverages.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [aspergillus oryzae; aspergillus flavus]
<Options>: A: aspergillus oryzae (aspergillus oryzae (ahlb.) cohn, 1884) (aka aspergillus oryzae)
B: tenggerimyces flavus
C: aspergillus neoellipticus (aka aspergillus fumigatus)
D: aspergillus fumigatus fresen., 1863 (aka aspergillus fumigatus)
E: aspergillus aureolus (neosartorya aureola) (aka aspergillus aureolus)
F: nigrospora oryzae (monotospora oryzae) (aka nigrospora oryzae)
G: aspergillus parvisclerotigenus (aka aspergillus flavus)
H: sclerotium oryzae (aka nakataea oryzae)
I: eurotium oryzae (aka aspergillus oryzae)
J: pleospora oryzae (aka phaeosphaeria oryzae)
K: None of the above. | [I; G] |
<Instruct>: Given the context 'Independent duplications of alpha-amylase in different strains of Aspergillus oryzae.
Aspergillus oryzae is a filamentous fungus that has arisen through the ancient domestication of Aspergillus flavus for making traditional oriental foods and beverages.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [aspergillus oryzae; aspergillus flavus]
<Options>: A: chitinophaga oryzae
B: aspergillus neoellipticus (aka aspergillus fumigatus)
C: aspergillus oryzae (aspergillus oryzae (ahlb.) cohn, 1884) (aka aspergillus oryzae)
D: aspergillus toxicarius
E: aspergillus toxicus
F: aspergillus cerealis
G: amorphomonas oryzae ('amorphomonas oryzae') (aka amorphomonas oryzae)
H: aspergillus parvisclerotigenus (aka aspergillus flavus)
I: None of the above. | [C; H] |
<Instruct>: Given the context 'In the many centuries A. oryzae has been used for fermenting the starch in rice to simple sugars, it has undergone selection for increased secretion of starch-degrading enzymes.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [a. oryzae]
<Options>: A: acinetobacter oryzae
B: chitinophaga oryzae
C: nigrospora oryzae (monotospora oryzae) (aka nigrospora oryzae)
D: aspergillus oryzae (aspergillus oryzae (ahlb.) cohn, 1884) (aka aspergillus oryzae)
E: azospirillum oryzae
F: None of the above. | [D] |
<Instruct>: Given the context 'In particular, all A. oryzae strains investigated thus far have two or more copies of a gene encoding alpha-amylase, whereas A. flavus has only one.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [a. oryzae; a. flavus]
<Options>: A: aspergillus oryzae (ahlb.) cohn, 1884 (aka aspergillus oryzae)
B: acerophagus flavus
C: cyanosporus flavus
D: pleomorphomonas oryzae (pleomonas oryzae) (aka pleomorphomonas oryzae)
E: kosakonia oryzae (enterobacter oryzae) (aka kosakonia oryzae)
F: micrococcus flavus
G: dickeya oryzae
H: petromyces flavus (aka aspergillus flavus)
I: flavitalea flava
J: amorphomonas oryzae ('amorphomonas oryzae') (aka amorphomonas oryzae)
K: None of the above. | [A; H] |
<Instruct>: Given the context 'In particular, all A. oryzae strains investigated thus far have two or more copies of a gene encoding alpha-amylase, whereas A. flavus has only one.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [a. oryzae; a. flavus]
<Options>: A: anaspis flava
B: petromyces flavus (aka aspergillus flavus)
C: aspergillus oryzae (ahlb.) cohn, 1884 (aka aspergillus oryzae)
D: cyanosporus flavus
E: aspergillus aureus
F: pleospora oryzae (aka phaeosphaeria oryzae)
G: kosakonia oryzae (enterobacter oryzae) (aka kosakonia oryzae)
H: hannaella oryzae (bullera oryzae) (aka hannaella oryzae)
I: herbiconiux flava
J: apodus oryzae
K: None of the above. | [C; B] |
<Instruct>: Given the context 'Here we investigate the duplications leading to these copies in three A. oryzae strains.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [a. oryzae]
<Options>: A: eurotium oryzae (aka aspergillus oryzae)
B: dickeya oryzae
C: kosakonia oryzae (enterobacter oryzae) (aka kosakonia oryzae)
D: monotospora oryzae (aka nigrospora oryzae)
E: magnaporthe oryzae (aka pyricularia oryzae)
F: None of the above. | [A] |
<Instruct>: Given the context 'Here we investigate the duplications leading to these copies in three A. oryzae strains.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [a. oryzae]
<Options>: A: magnaporthe oryzae (aka pyricularia oryzae)
B: monotospora oryzae (aka nigrospora oryzae)
C: kosakonia oryzae (enterobacter oryzae) (aka kosakonia oryzae)
D: dickeya oryzae
E: None of the above. | [E] |
<Instruct>: Given the context 'Although "unusual Mariners" of this size have previously been identified in A. oryzae, Aspergillus fumigatus and Aspergillus nidulans, this is the first evidence we know of that at least some of them are active in modern times and that their activity can contribute to beneficial genetic changes.
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [a. oryzae; aspergillus fumigatus; aspergillus nidulans]
<Options>: A: azospirillum oryzae
B: sartorya fumigata (aka aspergillus fumigatus)
C: aspergillus domesticus
D: aspergillus cerealis
E: aspergillus nidulans (eidam) g. winter, 1884 (aka aspergillus nidulans)
F: dickeya oryzae
G: aspergillus nidulans (aspergillus nidulans (eidam) g. winter, 1884) (aka aspergillus nidulans)
H: eurotium oryzae (aka aspergillus oryzae)
I: aspergillus asperus (aka aspergillus asper)
J: nigrospora oryzae (monotospora oryzae) (aka nigrospora oryzae)
K: hannaella oryzae (bullera oryzae) (aka hannaella oryzae)
L: neosartorya fumigata (aka aspergillus fumigatus)
M: aspergillus terricola
N: aspergillus oryzae (aspergillus oryzae (ahlb.) cohn, 1884) (aka aspergillus oryzae)
O: aspergillus lanosus
P: None of the above. | [H; B; G] |
<Instruct>: Given the context 'Although "unusual Mariners" of this size have previously been identified in A. oryzae, Aspergillus fumigatus and Aspergillus nidulans, this is the first evidence we know of that at least some of them are active in modern times and that their activity can contribute to beneficial genetic changes.
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [a. oryzae; aspergillus fumigatus; aspergillus nidulans]
<Options>: A: kosakonia oryzae (enterobacter oryzae) (aka kosakonia oryzae)
B: aspergillus agricola
C: aspergillus nidulellus (aka aspergillus nidulans)
D: aspergillus tritici (aka aspergillus neotritici)
E: aspergillus terricola
F: apodus oryzae
G: amorphomonas oryzae ('amorphomonas oryzae') (aka amorphomonas oryzae)
H: sartorya fumigata (aka aspergillus fumigatus)
I: aspergillus terreus (aspergillus terrestris) (aka aspergillus terreus)
J: aspergillus cerealis
K: aspergillus oryzae (ahlb.) cohn, 1884 (aka aspergillus oryzae)
L: azospirillum oryzae
M: eurotium oryzae (aka aspergillus oryzae)
N: neosartorya fumigata (aka aspergillus fumigatus)
O: None of the above. | [M; H; C] |
<Instruct>: Given the context 'Although "unusual Mariners" of this size have previously been identified in A. oryzae, Aspergillus fumigatus and Aspergillus nidulans, this is the first evidence we know of that at least some of them are active in modern times and that their activity can contribute to beneficial genetic changes.
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [a. oryzae; aspergillus fumigatus; aspergillus nidulans]
<Options>: A: aspergillus aureus
B: apodus oryzae
C: aspergillus aerius
D: aspergillus asperus (aka aspergillus asper)
E: aspergillus nidulans (aspergillus nidulans (eidam) g. winter, 1884) (aka aspergillus nidulans)
F: aspergillus lanosus
G: aspergillus oryzae var. oryzae
H: aspergillus oryzae (aspergillus oryzae (ahlb.) cohn, 1884) (aka aspergillus oryzae)
I: aspergillus rubrum (aka aspergillus ruber)
J: magnaporthe oryzae (aka pyricularia oryzae)
K: pleomonas oryzae (aka pleomorphomonas oryzae)
L: nassella nidulans
M: aspergillus cerealis
N: aspergillus fumigatus (aspergillus fumigatus var. ellipticus) (aka aspergillus fumigatus)
O: None of the above. | [H; N; E] |
<Instruct>: Given the context 'Compatible interaction with its rice host leads to enhanced expression of the gamma subunit of oligosaccharyl transferase in the Asian rice gall midge, Orseolia oryzae.
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [asian rice gall midge; orseolia oryzae]
<Options>: A: gallinago megala
B: morimus orientalis
C: asian rice gall midge (aka orseolia oryzae)
D: kosakonia oryzae (enterobacter oryzae) (aka kosakonia oryzae)
E: gemmiger gallinarum
F: trematosphaerella oryzae (aka phaeosphaeria oryzae)
G: shinella oryzae
H: tabanus mesogaeus
I: leeia oryzae
J: None of the above. | [C; C] |
<Instruct>: Given the context 'Compatible interaction with its rice host leads to enhanced expression of the gamma subunit of oligosaccharyl transferase in the Asian rice gall midge, Orseolia oryzae.
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [asian rice gall midge; orseolia oryzae]
<Options>: A: asian rice gall midge (aka orseolia oryzae)
B: rice weevil (aka sitophilus oryzae)
C: leptosphaerella oryzae (aka phaeosphaeria oryzae)
D: microptilotis orientalis (aka meliphaga orientalis)
E: rice leaf beetle (aka oulema oryzae)
F: orseolia oryzivora
G: mytilicola orientalis
H: zoogloea oryzae
I: koorchaloma oryzae
J: None of the above. | [A; A] |
<Instruct>: Given the context 'The Asian rice gall midge, Orseolia oryzae, is a fast evolving, damaging pest of rice.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [asian rice gall midge; orseolia oryzae]
<Options>: A: pestalotiopsis oryzae
B: oulema oryzae (rice leaf beetle) (aka oulema oryzae)
C: orseolia oryzae (asian rice gall midge) (aka orseolia oryzae)
D: meloidogyne oryzae
E: oxyopes oryzae
F: gemmiger gallinarum
G: blueberry gall midge (aka dasineura oxycoccana)
H: barley stem gall midge (aka mayetiola hordei)
I: koorchaloma oryzae
J: None of the above. | [C; C] |
<Instruct>: Given the context 'The Asian rice gall midge, Orseolia oryzae, is a fast evolving, damaging pest of rice.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [asian rice gall midge; orseolia oryzae]
<Options>: A: zoogloea oryzae
B: oxyopes oryzae
C: leeia oryzae
D: asian rice gall midge (aka orseolia oryzae)
E: barley stem gall midge (aka mayetiola hordei)
F: kosakonia oryzae (enterobacter oryzae) (aka kosakonia oryzae)
G: wheat midge (aka contarinia tritici)
H: blueberry gall midge (aka dasineura oxycoccana)
I: mytilicola orientalis
J: None of the above. | [D; D] |
<Instruct>: Given the context 'It has 72% similarity to its orthologue cloned from Aedes aegypti.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [aedes aegypti]
<Options>: A: aedes malayi (aka culex malayi)
B: culex vittatus (aka aedes vittatus)
C: culex aegypti (aka aedes aegypti)
D: aedes fluviatilis (aka ochlerotatus fluviatilis)
E: aedes flavopictus
F: None of the above. | [C] |
<Instruct>: Given the context 'Development Time and Body Size in Eupolyphaga sinensis Along a Latitudinal Gradient From China.
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [eupolyphaga sinensis]
<Options>: A: paraboea sinensis (phylloboea sinensis) (aka paraboea sinensis)
B: paratylenchus sinensis
C: pentacoelum sinensis
D: eupolyphaga sinensis
E: epiophlebia sinensis
F: None of the above. | [D] |
<Instruct>: Given the context 'We examined the effects of various temperatures (of 22, 25, 28, and 31^0C) on development time, adult body size and preadult survivorship in three populations of the cockroach, Eupolyphaga sinensis (Walker), collected at different latitudes.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [eupolyphaga sinensis]
<Options>: A: eupolyphaga sinensis
B: polyonyx sinensis
C: pentacoelum sinensis
D: primula sinensis
E: paraboea sinensis (phylloboea sinensis) (aka paraboea sinensis)
F: None of the above. | [A] |
<Instruct>: Given the context 'We examined the effects of various temperatures (of 22, 25, 28, and 31^0C) on development time, adult body size and preadult survivorship in three populations of the cockroach, Eupolyphaga sinensis (Walker), collected at different latitudes.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [eupolyphaga sinensis]
<Options>: A: paraboea sinensis (phylloboea sinensis) (aka paraboea sinensis)
B: primula sinensis
C: polyonyx sinensis
D: pentacoelum sinensis
E: None of the above. | [E] |
<Instruct>: Given the context 'We found substantial temperature-induced plasticity in development time, body size, and preadult survivorship, indicating that developmental temperatures have strong impacts on growth and life history traits of E. sinensis.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [e. sinensis]
<Options>: A: dregea sinensis
B: eucheyletia sinensis
C: oenanthe sinensis
D: erysiphe sinensis (microsphaera sinensis) (aka erysiphe sinensis)
E: roussoella sinensis
F: None of the above. | [F] |
<Instruct>: Given the context 'Overall, changes in development time, body size, and preadult survivorship in E. sinensis can all be regarded as adaptations to changing thermal regimes.
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [e. sinensis]
<Options>: A: eriocheir japonica sinensis (aka eriocheir sinensis)
B: paracerella sinensis
C: theileria sinensis
D: eucheyletia sinensis
E: erysiphe sinensis (microsphaera sinensis) (aka erysiphe sinensis)
F: None of the above. | [F] |
<Instruct>: Given the context 'Tyrosine phosphorylation of actin during microcyst formation and germination in Polysphondylium pallidum.
', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [polysphondylium pallidum]
<Options>: A: polysphondylium pallidum (aka heterostelium pallidum)
B: hyphoderma pallidum (aka peniophorella pallida)
C: protoplectron pallidum
D: porrhomma pallidum
E: protium pallidum
F: None of the above. | [A] |
<Instruct>: Given the context 'High osmolarity causes amoebae of the cellular slime mould Polysphondylium pallidum to individually encyst, forming microcysts.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [polysphondylium pallidum]
<Options>: A: canalisporium pallidum
B: phytonemus pallidus
C: polysphondylium pallidum (aka heterostelium pallidum)
D: diplazium pallidum
E: chrysosporium pallidum
F: None of the above. | [C] |
<Instruct>: Given the context 'Accordingly, natural enemy diversity and abundance were expected to be greater in the southwestern U.S. C. adspersus and their larval parasitoids were collected from stems of four native sunflower species (Helianthus annuus, H. nuttallii, H. pauciflorus, and H. petiolaris) from 147 sites across eight states.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [helianthus annuus; h. nuttallii; h. pauciflorus; h. petiolaris]
<Options>: A: erica petiolaris
B: helianthus longifolius
C: haemanthus pauculifolius
D: rhipicentor nuttalli
E: helianthus annuus (common sunflower) (aka helianthus annuus)
F: helianthus pauciflorus subsp. pauciflorus
G: helichrysum petiolare
H: helianthus nuttallii
I: helianthus giganteus
J: helianthus petiolaris
K: molinaea petiolaris
L: heteromormyrus pauciradiatus
M: helianthus pauciflorus
N: mononeuria nuttallii (stellaria nuttallii) (aka mononeuria nuttallii)
O: lobelia nuttallii
P: phalaenoptilus nuttallii (phalaenoptilus nuttalli) (aka phalaenoptilus nuttallii)
Q: heteropterys pauciflora (hiraea pauciflora) (aka heteropterys pauciflora)
R: euphorbia petiolaris
S: helianthus mollis
T: helianthus heterophyllus
U: None of the above. | [E; H; M; J] |
<Instruct>: Given the context 'Accordingly, natural enemy diversity and abundance were expected to be greater in the southwestern U.S. C. adspersus and their larval parasitoids were collected from stems of four native sunflower species (Helianthus annuus, H. nuttallii, H. pauciflorus, and H. petiolaris) from 147 sites across eight states.', select the correct biomedical concept for each mention using the provided options. Answer by listing the selected options, one for each mention, separated by semicolon. | <Mentions>: [helianthus annuus; h. nuttallii; h. pauciflorus; h. petiolaris]
<Options>: A: cucumberleaf sunflower (aka helianthus debilis)
B: helianthus petiolaris
C: helianthus pauciflorus
D: helianthus petiolaris subsp. petiolaris
E: besleria petiolaris (collandra petiolaris) (aka besleria petiolaris)
F: stachys nuttallii
G: rhexia nuttallii
H: holcopelte petiolata (aka horismenus petiolatus)
I: halalkalicoccus paucihalophilus
J: helianthus nuttallii
K: arabis nuttallii
L: helianthus heterophyllus
M: hippobromus pauciflorus
N: holcus annuus
O: haladaptatus paucihalophilus
P: common sunflower (aka helianthus annuus)
Q: helianthus carnosus
R: mononeuria nuttallii (stellaria nuttallii) (aka mononeuria nuttallii)
S: justicia petiolaris
T: hyacinthus paucifolius (aka lachenalia paucifolia)
U: None of the above. | [P; J; C; B] |
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